FvH4_5g15980

F-Box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000068
Physical Location & Seq
Reverse (-)
9070431 .. 9072834
2404 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g15980.t1

Sequence Viewer

Length: 1515 bp
ATGTCAGAATATTTGCCCTTAGAAATCACAACCGATATCATGCTAAGGTTGCCTCCCGAGTCCATAATCACATGCGCAGCAGTCTGCAAATCATGGAATTCTCTGATTAGAAGATCCACCTTCATTAAAGACCATCTCAACGCCGCCATACAATCCTACCGCCTAAACGATGTTCACAATCTTCTGATAATGAAGCAAATGGAGGGTTACTCACTGTACCGGGATAACCCTTCTGAACTTGGCACCACTGTTGATCATGAACACATCTCCATAATGATTTGGAACCCTACGGTTAGGAAGTTCATGATCTTGCCAAGGCCTGTTGATATTGGTCGTATTAAATGGCGCCCTCGACAAACTCATCATGCATTTGGGCATGATTCGAGAAACAATGACTATAAGGTTTTAAGAATCGTAAGTGGTGTGATTGATGGAGAACCATTTAGGGTTGAAGTACTAGTTTATTCGTTAGCTAGGGGATCGTGGAGAACCCTTGCTGTTGATGTACCTGCTTGTTATTATTTCGAGCCTGCTGCAGCTGCAGGTGTATCTAGTTTCCTCAATGGTGCTTCCCATTGGATTCAAACCCTTAAGAACGACGTCTACGGAAAGCAAAGAGAAGAGTATGTAATTGTGTGGTTCAACATGGAAACTGAGTTATTTGGTGAGATACAGATGCCTGAAGCTTTTAGAAAACACAAACCATGCTCGATTTACTTCATTTCAAAATATGAGGAGTACCTTGCCTTGATTGAAAGTTCCATAATCCAAGAGGGGCGCTATGGCCTTCAAGTGTGGGTTATGAAAGAGTATGGAGTTGTGGAATCATGGACTAGATTATACATGAACTCTGCCCTACCAAGTTTTCCAAGGCCCCCGTTTTGTTTCGAAAGCAGTTGTGAATTAGTATTCCAGGAAGCAGAACTTGCTGACCCTGATCCATTACAAGACTTCTGTGTCGCTGATTTCACTCGCGCCTCTAAGTCAGACAACGTCTTCGCCTGCAAGGCAATCACGGAGGTTACTTCCGATGACTTTGTCTTTGACGGGGCACGCGAGAAAGGGAACATCACAGATCTGTTCGGGTTGAATGTCACAGATGGCAATGTGCTTGCTTTTCCTGCCCTCAACACACTCGGGGTGTCAATGAACAGAGTTGACTTTGCCCCGGGTGCCTTGAACCCACCTCACTTGCATCCTCGTGCGAGTGAGATTGGGATAGTCATTGAAGGGACAATTCTCGCAGGGTTTGTGACAACTAACAATGTGTACTACTCGAAGGTTTTGACCGCCGGGCAGATGTTTGTGATTCCGAGAGGACTTGTGCACTTCCAACTCAATATTGGACAAGGGAACGCCCTTTCCATCACAGCTTTCAACAGTCACTTGCCTGGCTCTTCTAAACTTCCTTTGAATATGTTTTCTGCTATGCCTTCAATCCCGGACCAAGTGTTAACAAAGACCTTTCAAGTAGACCAAGATGTGATCAGCAGCATTAGATCCAAGTTTGGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1 FBA_3

Protein Analysis

505

Amino Acids

56.81

Weight (kDa)

5.84

Isoelectric Point (pI)

39.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 4 - 39 2.3e-08 F-box-like
F-box PF00646 5 - 41 2.4e-08 F-box domain
FBA_3 PF08268 86 - 278 8.8e-18 F-box associated beta propeller domain
FBA_1 PF07734 88 - 298 2.7e-16 F-box associated beta propeller domain
Cupin_1 PF00190 351 - 494 3.7e-43 Cupin
Cupin_2 PF07883 385 - 453 2.6e-08 Cupin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 533
AasI GACNNNNNNGTC 1 cut(s) 956
AatII GACGTC 1 cut(s) 603
Acc16I TGCGCA 1 cut(s) 76
Acc36I ACCTGC 2 cut(s) 517, 533
AccB1I GGYRCC 3 cut(s) 242, 345, 1172
AccI GTMKAC 2 cut(s) 603, 1473
AccII CGCG 2 cut(s) 975, 1056
AciI CCGC 3 cut(s) 144, 160, 1290
AclWI GGATC 4 cut(s) 108, 487, 932, 1494
AcsI RAATTY 1 cut(s) 97
AcuI CTGAAG 1 cut(s) 702
AcyI GRCGYC 2 cut(s) 346, 600
AfaI GTAC 5 cut(s) 218, 456, 507, 740, 1271
AflII CTTAAG 1 cut(s) 590
AhlI ACTAGT 1 cut(s) 457
AjnI CCWGG 2 cut(s) 912, 1390
AloI GAACNNNNNNTCC 2 cut(s) 1346, 1378
AluBI AGCT 4 cut(s) 473, 539, 686, 1373
AluI AGCT 4 cut(s) 473, 539, 686, 1373
Alw21I GWGCWC 1 cut(s) 1329
Alw44I GTGCAC 1 cut(s) 1325
AlwI GGATC 4 cut(s) 108, 487, 932, 1494
Ama87I CYCGRG 3 cut(s) 56, 1136, 1168
AoxI GGCC 3 cut(s) 317, 784, 872
ApaLI GTGCAC 1 cut(s) 1325
ApeKI GCWGC 5 cut(s) 77, 533, 536, 539, 1491
ApoI RAATTY 1 cut(s) 97
ArsI GACNNNNNNTTYG 4 cut(s) 980, 1012, 1025, 1057
AspLEI GCGC 4 cut(s) 77, 348, 780, 977
AspS9I GGNCC 2 cut(s) 873, 1444
AsuC2I CCSGG 5 cut(s) 221, 1169, 1170, 1294, 1442
AsuHPI GGTGA 1 cut(s) 677
AsuII TTCGAA 1 cut(s) 888
AvaI CYCGRG 3 cut(s) 56, 1136, 1168
AvaII GGWCC 1 cut(s) 1444
BaeGI GKGCMC 2 cut(s) 1054, 1329
BanI GGYRCC 3 cut(s) 242, 345, 1172
BauI CACGAG 1 cut(s) 1200
BbsI GAAGAC 1 cut(s) 988
Bbv12I GWGCWC 1 cut(s) 1329
BbvI GCAGC 5 cut(s) 89, 520, 526, 548, 1503
BccI CCATC 4 cut(s) 141, 425, 1094, 1373
BcgI CGANNNNNNTGC 2 cut(s) 515, 549
BciT130I CCWGG 2 cut(s) 914, 1392
BclI TGATCA 2 cut(s) 253, 1485
BcnI CCSGG 5 cut(s) 221, 1169, 1170, 1294, 1442
BcuI ACTAGT 1 cut(s) 457
BfaI CTAG 4 cut(s) 458, 474, 552, 834
BfmI CTRYAG 2 cut(s) 534, 540
BfoI RGCGCY 2 cut(s) 349, 781
BfrI CTTAAG 1 cut(s) 590
BfuAI ACCTGC 2 cut(s) 517, 533
BglI GCCNNNNNGGC 1 cut(s) 1007
BglII AGATCT 1 cut(s) 1075
BisI GCNGC 6 cut(s) 78, 144, 534, 537, 540, 1492
BlsI GCNGC 6 cut(s) 79, 145, 535, 538, 541, 1493
BmcAI AGTACT 1 cut(s) 456
Bme1390I CCNGG 7 cut(s) 221, 914, 1169, 1170, 1294, 1392, 1442
Bme18I GGWCC 1 cut(s) 1444
BmeT110I CYCGRG 3 cut(s) 56, 1136, 1168
BmgT120I GGNCC 2 cut(s) 873, 1444
BmiI GGNNCC 5 cut(s) 244, 284, 347, 875, 1174
BmrFI CCNGG 7 cut(s) 221, 914, 1169, 1170, 1294, 1392, 1442
BmsI GCATC 2 cut(s) 666, 1204
BpiI GAAGAC 1 cut(s) 988
BplI GAGNNNNNCTC 2 cut(s) 194, 226
Bpu10I CCTNAGC 1 cut(s) 44
Bpu14I TTCGAA 1 cut(s) 888
BpuMI CCSGG 5 cut(s) 221, 1169, 1170, 1294, 1442
BsaHI GRCGYC 2 cut(s) 346, 600
BsaJI CCNNGG 4 cut(s) 314, 869, 1167, 1168
Bse3DI GCAATG 1 cut(s) 1111
BseBI CCWGG 2 cut(s) 914, 1392
BseDI CCNNGG 4 cut(s) 314, 869, 1167, 1168
BseGI GGATG 1 cut(s) 1195
BseMI GCAATG 1 cut(s) 1111
BseMII CTCAG 1 cut(s) 645
BseRI GAGGAG 1 cut(s) 749
BseSI GKGCMC 2 cut(s) 1054, 1329
BseXI GCAGC 5 cut(s) 89, 520, 526, 548, 1503
Bsh1236I CGCG 2 cut(s) 975, 1056
BshFI GGCC 3 cut(s) 319, 786, 874
BshNI GGYRCC 3 cut(s) 242, 345, 1172
BsiHKAI GWGCWC 1 cut(s) 1329
BsiHKCI CYCGRG 3 cut(s) 56, 1136, 1168
BsiSI CCGG 4 cut(s) 220, 1169, 1293, 1442
BslFI GGGAC 1 cut(s) 1246
BsmFI GGGAC 1 cut(s) 1246
BsnI GGCC 3 cut(s) 319, 786, 874
BsoBI CYCGRG 3 cut(s) 56, 1136, 1168
Bsp119I TTCGAA 1 cut(s) 888
Bsp1286I GDGCHC 2 cut(s) 1054, 1329
Bsp143I GATC 8 cut(s) 113, 253, 306, 479, 937, 1075, 1485, 1499
BspACI CCGC 3 cut(s) 144, 160, 1290
BspANI GGCC 3 cut(s) 319, 786, 874
BspCNI CTCAG 1 cut(s) 646
BspFNI CGCG 2 cut(s) 975, 1056
BspHI TCATGA 2 cut(s) 256, 303
BspLI GGNNCC 5 cut(s) 244, 284, 347, 875, 1174
BspMAI CTGCAG 2 cut(s) 538, 544
BspMI ACCTGC 2 cut(s) 517, 533
BspPI GGATC 4 cut(s) 108, 487, 932, 1494
BspQI GCTCTTC 1 cut(s) 1402
BspT104I TTCGAA 1 cut(s) 888
BspT107I GGYRCC 3 cut(s) 242, 345, 1172
BspTI CTTAAG 1 cut(s) 590
BsrDI GCAATG 1 cut(s) 1111
BssECI CCNNGG 4 cut(s) 314, 869, 1167, 1168
BssMI GATC 8 cut(s) 113, 253, 306, 479, 937, 1075, 1485, 1499
BssNI GRCGYC 2 cut(s) 346, 600
BssSI CACGAG 1 cut(s) 1200
BssT1I CCWWGG 2 cut(s) 314, 869
Bst2BI CACGAG 1 cut(s) 1200
Bst2UI CCWGG 2 cut(s) 914, 1392
Bst4CI ACNGT 4 cut(s) 216, 250, 292, 1382
Bst6I CTCTTC 2 cut(s) 615, 1402
BstACI GRCGYC 2 cut(s) 346, 600
BstAFI CTTAAG 1 cut(s) 590
BstAPI GCANNNNNTGC 1 cut(s) 926
BstBI TTCGAA 1 cut(s) 888
BstC8I GCNNGC 4 cut(s) 531, 1003, 1054, 1113
BstDEI CTNAG 4 cut(s) 19, 44, 654, 981
BstF5I GGATG 1 cut(s) 1195
BstFNI CGCG 2 cut(s) 975, 1056
BstH2I RGCGCY 2 cut(s) 349, 781
BstHHI GCGC 4 cut(s) 77, 348, 780, 977
BstKTI GATC 8 cut(s) 116, 256, 309, 482, 940, 1078, 1488, 1502
BstMBI GATC 8 cut(s) 113, 253, 306, 479, 937, 1075, 1485, 1499
BstMWI GCNNNNNNNGC 6 cut(s) 49, 539, 926, 1007, 1121, 1172
BstNI CCWGG 2 cut(s) 914, 1392
BstNSI RCATGY 1 cut(s) 75
BstSCI CCNGG 7 cut(s) 219, 912, 1167, 1168, 1292, 1390, 1440
BstSFI CTRYAG 2 cut(s) 534, 540
BstSLI GKGCMC 2 cut(s) 1054, 1329
BstUI CGCG 2 cut(s) 975, 1056
BstV1I GCAGC 5 cut(s) 89, 520, 526, 548, 1503
BstV2I GAAGAC 1 cut(s) 988
BstX2I RGATCY 3 cut(s) 113, 1075, 1499
BstYI RGATCY 3 cut(s) 113, 1075, 1499
BsuRI GGCC 3 cut(s) 319, 786, 874
BtsCI GGATG 1 cut(s) 1195
BtsIMutI CAGTG 2 cut(s) 212, 246
BveI ACCTGC 2 cut(s) 517, 533
Cac8I GCNNGC 4 cut(s) 531, 1003, 1054, 1113
CciI TCATGA 2 cut(s) 256, 303
CfoI GCGC 4 cut(s) 77, 348, 780, 977
Cfr13I GGNCC 2 cut(s) 873, 1444
Cfr9I CCCGGG 1 cut(s) 1168
Csp6I GTAC 5 cut(s) 217, 455, 506, 739, 1270
CspCI CAANNNNNGTGG 2 cut(s) 1173, 1208
CviQI GTAC 5 cut(s) 217, 455, 506, 739, 1270
DdeI CTNAG 4 cut(s) 19, 44, 654, 981
DinI GGCGCC 1 cut(s) 347
DpnI GATC 8 cut(s) 115, 255, 308, 481, 939, 1077, 1487, 1501
DpnII GATC 8 cut(s) 113, 253, 306, 479, 937, 1075, 1485, 1499
DrdI GACNNNNNNGTC 1 cut(s) 956
DseDI GACNNNNNNGTC 1 cut(s) 956
Eam1104I CTCTTC 2 cut(s) 615, 1402
EarI CTCTTC 2 cut(s) 615, 1402
Eco130I CCWWGG 2 cut(s) 314, 869
Eco147I AGGCCT 1 cut(s) 319
Eco32I GATATC 1 cut(s) 37
Eco47I GGWCC 1 cut(s) 1444
Eco57I CTGAAG 1 cut(s) 702
Eco88I CYCGRG 3 cut(s) 56, 1136, 1168
EcoO109I RGGNCCY 1 cut(s) 873
EcoRI GAATTC 1 cut(s) 97
EcoRII CCWGG 2 cut(s) 912, 1390
EcoRV GATATC 1 cut(s) 37
EcoT14I CCWWGG 2 cut(s) 314, 869
EcoT22I ATGCAT 1 cut(s) 370
EgeI GGCGCC 1 cut(s) 347
EheI GGCGCC 1 cut(s) 347
ErhI CCWWGG 2 cut(s) 314, 869
FalI AAGNNNNNCTT 2 cut(s) 909, 941
FaqI GGGAC 1 cut(s) 1246
FbaI TGATCA 2 cut(s) 253, 1485
FblI GTMKAC 2 cut(s) 603, 1473
Fnu4HI GCNGC 6 cut(s) 78, 144, 534, 537, 540, 1492
FokI GGATG 1 cut(s) 1182
Fsp4HI GCNGC 6 cut(s) 78, 144, 534, 537, 540, 1492
FspBI CTAG 4 cut(s) 458, 474, 552, 834
FspI TGCGCA 1 cut(s) 76
GlaI GCGC 4 cut(s) 76, 347, 779, 976
GluI GCNGC 6 cut(s) 78, 144, 534, 537, 540, 1492
HaeII RGCGCY 2 cut(s) 349, 781
HaeIII GGCC 3 cut(s) 319, 786, 874
HapII CCGG 4 cut(s) 220, 1169, 1293, 1442
HhaI GCGC 4 cut(s) 77, 348, 780, 977
Hin1I GRCGYC 2 cut(s) 346, 600
Hin6I GCGC 4 cut(s) 75, 346, 778, 975
HinP1I GCGC 4 cut(s) 75, 346, 778, 975
HincII GTYRAC 2 cut(s) 1159, 1455
HindII GTYRAC 2 cut(s) 1159, 1455
HindIII AAGCTT 1 cut(s) 684
HinfI GANTC 6 cut(s) 59, 380, 411, 580, 824, 1309
HpaI GTTAAC 1 cut(s) 1455
HpaII CCGG 4 cut(s) 220, 1169, 1293, 1442
HphI GGTGA 1 cut(s) 677
Hpy166II GTNNAC 7 cut(s) 175, 604, 1159, 1270, 1327, 1455, 1474
Hpy188I TCNGA 7 cut(s) 7, 105, 186, 235, 988, 1030, 1314
Hpy188III TCNNGA 4 cut(s) 56, 257, 304, 384
Hpy8I GTNNAC 7 cut(s) 175, 604, 1159, 1270, 1327, 1455, 1474
Hpy99I CGWCG 1 cut(s) 602
HpyAV CCTTC 6 cut(s) 130, 240, 797, 1223, 1273, 1443
HpyCH4III ACNGT 4 cut(s) 216, 250, 292, 1382
HpyCH4IV ACGT 2 cut(s) 600, 993
HpyCH4V TGCA 7 cut(s) 87, 368, 536, 542, 1005, 1195, 1327
HpyF10VI GCNNNNNNNGC 6 cut(s) 49, 539, 926, 1007, 1121, 1172
HpyF3I CTNAG 4 cut(s) 19, 44, 654, 981
HpySE526I ACGT 2 cut(s) 600, 993
Hsp92I GRCGYC 2 cut(s) 346, 600
HspAI GCGC 4 cut(s) 75, 346, 778, 975
KasI GGCGCC 1 cut(s) 345
Ksp22I TGATCA 2 cut(s) 253, 1485
KspAI GTTAAC 1 cut(s) 1455
Kzo9I GATC 8 cut(s) 113, 253, 306, 479, 937, 1075, 1485, 1499
LguI GCTCTTC 1 cut(s) 1402
Lsp1109I GCAGC 5 cut(s) 89, 520, 526, 548, 1503
LweI GCATC 2 cut(s) 666, 1204
MaeI CTAG 4 cut(s) 458, 474, 552, 834
MaeII ACGT 2 cut(s) 600, 993
MaeIII GTNAC 5 cut(s) 206, 1021, 1093, 1252, 1382
MalI GATC 8 cut(s) 115, 255, 308, 481, 939, 1077, 1487, 1501
MboI GATC 8 cut(s) 113, 253, 306, 479, 937, 1075, 1485, 1499
MboII GAAGA 5 cut(s) 123, 173, 632, 988, 1389
MflI RGATCY 3 cut(s) 113, 1075, 1499
MhlI GDGCHC 2 cut(s) 1054, 1329
MluCI AATT 4 cut(s) 97, 630, 902, 1236
Mly113I GGCGCC 1 cut(s) 346
MlyI GAGTC 1 cut(s) 68
MmeI TCCRAC 1 cut(s) 1357
Mph1103I ATGCAT 1 cut(s) 370
MseI TTAA 5 cut(s) 126, 339, 407, 591, 1454
MslI CAYNNNNRTG 1 cut(s) 1200
MspA1I CMGCKG 1 cut(s) 539
MspCI CTTAAG 1 cut(s) 590
MspI CCGG 4 cut(s) 220, 1169, 1293, 1442
MspR9I CCNGG 7 cut(s) 221, 914, 1169, 1170, 1294, 1392, 1442
MvaI CCWGG 2 cut(s) 914, 1392
MvnI CGCG 2 cut(s) 975, 1056
MwoI GCNNNNNNNGC 6 cut(s) 49, 539, 926, 1007, 1121, 1172
NarI GGCGCC 1 cut(s) 346
NciI CCSGG 5 cut(s) 221, 1169, 1170, 1294, 1442
NdeII GATC 8 cut(s) 113, 253, 306, 479, 937, 1075, 1485, 1499
NlaIV GGNNCC 5 cut(s) 244, 284, 347, 875, 1174
NmuCI GTSAC 3 cut(s) 1093, 1252, 1382
NsbI TGCGCA 1 cut(s) 76
NsiI ATGCAT 1 cut(s) 370
NspI RCATGY 1 cut(s) 75
NspV TTCGAA 1 cut(s) 888
PagI TCATGA 2 cut(s) 256, 303
PaqCI CACCTGC 1 cut(s) 533
PceI AGGCCT 1 cut(s) 319
PciSI GCTCTTC 1 cut(s) 1402
PcsI WCGNNNNNNNCGW 1 cut(s) 1053
PfeI GAWTC 5 cut(s) 380, 411, 580, 824, 1309
PflFI GACNNNGTC 2 cut(s) 992, 1037
PfoI TCCNGGA 2 cut(s) 912, 1440
PkrI GCNGC 6 cut(s) 79, 145, 535, 538, 541, 1493
PleI GAGTC 1 cut(s) 67
PluTI GGCGCC 1 cut(s) 349
PpsI GAGTC 1 cut(s) 67
Psp6I CCWGG 2 cut(s) 912, 1390
PspGI CCWGG 2 cut(s) 912, 1390
PspN4I GGNNCC 5 cut(s) 244, 284, 347, 875, 1174
PspPI GGNCC 2 cut(s) 873, 1444
PsrI GAACNNNNNNTAC 2 cut(s) 587, 619
PstI CTGCAG 2 cut(s) 538, 544
PsuI RGATCY 3 cut(s) 113, 1075, 1499
PsyI GACNNNGTC 2 cut(s) 992, 1037
PvuII CAGCTG 1 cut(s) 539
RsaI GTAC 5 cut(s) 218, 456, 507, 740, 1271
RsaNI GTAC 5 cut(s) 217, 455, 506, 739, 1270
RseI CAYNNNNRTG 1 cut(s) 1200
SapI GCTCTTC 1 cut(s) 1402
SaqAI TTAA 5 cut(s) 126, 339, 407, 591, 1454
SatI GCNGC 6 cut(s) 78, 144, 534, 537, 540, 1492
Sau3AI GATC 8 cut(s) 113, 253, 306, 479, 937, 1075, 1485, 1499
Sau96I GGNCC 2 cut(s) 873, 1444
ScaI AGTACT 1 cut(s) 456
SchI GAGTC 1 cut(s) 68
ScrFI CCNGG 7 cut(s) 221, 914, 1169, 1170, 1294, 1392, 1442
SduI GDGCHC 2 cut(s) 1054, 1329
SfaNI GCATC 2 cut(s) 666, 1204
SfcI CTRYAG 2 cut(s) 534, 540
SfoI GGCGCC 1 cut(s) 347
SfuI TTCGAA 1 cut(s) 888
SinI GGWCC 1 cut(s) 1444
SmaI CCCGGG 1 cut(s) 1170
SmiMI CAYNNNNRTG 1 cut(s) 1200
SmlI CTYRAG 1 cut(s) 590
SmoI CTYRAG 1 cut(s) 590
SpeI ACTAGT 1 cut(s) 457
Sse9I AATT 4 cut(s) 97, 630, 902, 1236
SseBI AGGCCT 1 cut(s) 319
SsiI CCGC 3 cut(s) 144, 160, 1290
SspDI GGCGCC 1 cut(s) 345
SspI AATATT 2 cut(s) 11, 1342
SspMI CTAG 4 cut(s) 458, 474, 552, 834
StuI AGGCCT 1 cut(s) 319
StyD4I CCNGG 7 cut(s) 219, 912, 1167, 1168, 1292, 1390, 1440
StyI CCWWGG 2 cut(s) 314, 869
TaaI ACNGT 4 cut(s) 216, 250, 292, 1382
TaiI ACGT 2 cut(s) 603, 996
TaqI TCGA 6 cut(s) 352, 383, 525, 710, 888, 1277
TasI AATT 4 cut(s) 97, 630, 902, 1236
TatI WGTACW 2 cut(s) 454, 1269
TauI GCSGC 1 cut(s) 146
TfiI GAWTC 5 cut(s) 380, 411, 580, 824, 1309
Tru1I TTAA 5 cut(s) 126, 339, 407, 591, 1454
Tru9I TTAA 5 cut(s) 126, 339, 407, 591, 1454
TscAI CASTG 2 cut(s) 219, 253
TseFI GTSAC 3 cut(s) 1093, 1252, 1382
TseI GCWGC 5 cut(s) 77, 533, 536, 539, 1491
Tsp45I GTSAC 3 cut(s) 1093, 1252, 1382
TspDTI ATGAA 8 cut(s) 112, 206, 273, 292, 709, 818, 860, 1163
TspGWI ACGGA 2 cut(s) 621, 1031
TspMI CCCGGG 1 cut(s) 1168
TspRI CASTG 2 cut(s) 219, 253
Tth111I GACNNNGTC 2 cut(s) 992, 1037
Vha464I CTTAAG 1 cut(s) 590
VneI GTGCAC 1 cut(s) 1325
VpaK11BI GGWCC 1 cut(s) 1444
XapI RAATTY 1 cut(s) 97
XceI RCATGY 1 cut(s) 75
XcmI CCANNNNNNNNNTGG 1 cut(s) 1340
XmaI CCCGGG 1 cut(s) 1168
XmiI GTMKAC 2 cut(s) 603, 1473
XspI CTAG 4 cut(s) 458, 474, 552, 834
ZraI GACGTC 1 cut(s) 601
ZrmI AGTACT 1 cut(s) 456
Zsp2I ATGCAT 1 cut(s) 370
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.