Rorug02G0206700

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000068
Physical Location & Seq
Reverse (-)
19405051 .. 19406607
1557 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0206700.1

Sequence Viewer

Length: 969 bp
ATGGAGGCAATGTCGACGGAGCCATCGGATTACAAGCCCTACACCCTGTTCGAAACCCTAACCGGCCACAAGAGCGCCATCTCCGGCGTCAAATTCTCCTCCGACGGCCGCCTCCTCGGCTCCTCCTCCGCCGACAAAACCATCCGCACCTACTCCCTCTCCTCCTCCTCCTCCGACTCCCCAGCTCCGACCATCACCCCCGCCCAGACCTTCGAGGGCCACGACCAGGGCGTCTCGGACCTCGCCTTCTCCGCCGACTCCCGGTTCATGGTCTCGGCCTCCGACGACAAAACCCTCCGGCTCTGGGACGTGGAAACCGGCGACCTCATCAAAACCCTCCGCGGGCACACCAACTACGTCTTCTGCGCCAACTTCAATCCCCAGTCCAACATGATCGTCTCCGGCTCGTTCGACGAAACGGTGCGTATTTGGGATGTCAAGACCGGAAAGTGCCTCAAGGTGTTGCCGGCTCACTCCGATCCGGTCACGGCCGTTGATTTCAATCGGGACGGCTCGATTATCGTTTCGAGTAGCTACGATGGGCTGTGTAGGACCTGGGATGCTTCCACCGGGCATTGCACCAAGACTTTGATTGACGATGAGAATCCCCCGGTTTCGTTTGTCAAGTTCTCCCCTAATGGCAAGTTCATTCTTGTTGGCACTTTGGATAATACTCTGAGGCTTTGGAACTTTCAAACTGGCAAATGTCTAAAGACTTACACAGGCCACAAGAGTTCAAAATTCTGCATTTCTTCCACCTTTTCTGTGACAAATGGGAAATACATTGTAAGCGGTTCTGAAGATCATTGTTTATACTTGTGGGAATTGCAAAGCAGGAAAATAGTTCAGAAATTGGAAGGTCACACTGATACTGTTATATCAGTTTCATGTCACCCTGAAAAGAACATAATTGCATCTGGTGCACTTGGGAATGATAAGACCGTGAAGATCTGGACTCAGGAGAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

322

Amino Acids

35.32

Weight (kDa)

6.14

Isoelectric Point (pI)

34.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WD40_MABP1-WDR62_2nd PF24782 12 - 186 1.4e-18 MABP1/WDR62 second WD40 domain
Beta-prop_CAF1B_HIR1 PF24105 16 - 107 4.5e-09 CAF1B/HIR1 beta-propeller domain
WD40_CDC20-Fz PF24807 16 - 84 7.4e-06 CDC20/Fizzy WD40 domain
WD40_Prp19 PF24814 16 - 112 7e-14 Prp19 WD40 domain
WD40 PF00400 18 - 51 3.9e-07 WD domain, G-beta repeat
Beta-prop_TEP1_2nd PF25047 18 - 192 7.8e-23 TEP-1 second beta-propeller
Beta-prop_WDR3_1st PF25173 18 - 113 2e-15 WDR3 first beta-propeller domain
Beta-prop_EML_2 PF23414 19 - 112 8.7e-12 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR5 PF25175 19 - 319 9.7e-141 WDR5 beta-propeller domain
EIF3I PF24805 20 - 113 1.4e-10 EIF3I
Beta-prop_THOC3 PF25174 23 - 306 1.2e-63 THOC3 beta-propeller domain
Beta-prop_WDR41 PF25178 55 - 155 9.3e-11 WDR41
WD40 PF00400 67 - 103 8e-12 WD domain, G-beta repeat
Beta-prop_WDR3_1st PF25173 68 - 200 1.2e-34 WDR3 first beta-propeller domain
Beta-prop_WDR36-Utp21_2nd PF25168 69 - 112 2.1e-09 WDR36/Utp21 second beta-propeller domain
Beta-prop_WDR3_2nd PF25172 69 - 188 5.6e-21 WDR3 second beta-propeller domain
WDR55 PF24796 69 - 318 7.9e-26 WDR55
WD40_Gbeta PF25391 70 - 278 3.5e-26 G protein beta WD-40 repeat protein
WD40_MABP1-WDR62_1st PF24780 72 - 177 3.6e-11 MABP1/WDR62 first WD40 domain
Beta-prop_EML PF23409 73 - 134 6e-07 Echinoderm microtubule-associated protein first beta-propeller
WD40_CDC20-Fz PF24807 73 - 190 1.1e-17 CDC20/Fizzy WD40 domain
Beta-prop_IFT122_1st PF23381 76 - 178 2.6e-09 IFT122 first beta-propeller
WD40_WDHD1_1st PF24817 77 - 155 4.3e-16 WDHD1 first WD40 domain
WDR90_beta-prop_4th PF23342 78 - 208 2.2e-11 WDR90, 4th beta-propeller
NBCH_WD40 PF20426 81 - 150 4.5e-06 Neurobeachin beta propeller domain
Beta-prop_WDR75_1st PF23869 83 - 147 1.1e-08 WD repeat-containing protein 75 first beta-propeller
Beta-prop_SCAP PF24017 87 - 191 3e-10 SCAP Beta-propeller
Beta-prop_WDR90_POC16_2nd PF23393 88 - 193 6e-11 WDR90/POC16, second beta-propeller
Beta-prop_WDR36-Utp21_1st PF25171 93 - 231 1.6e-14 WDR36/Utp21 first beta-propeller
WD40_Prp19 PF24814 101 - 276 3.5e-33 Prp19 WD40 domain
Beta-prop_WDR36-Utp21_2nd PF25168 103 - 152 7.7e-07 WDR36/Utp21 second beta-propeller domain
EIF3I PF24805 107 - 155 1.5e-08 EIF3I
WD40 PF00400 108 - 145 1.2e-10 WD domain, G-beta repeat
Beta-prop_CAF1B_HIR1 PF24105 109 - 196 3e-14 CAF1B/HIR1 beta-propeller domain
Beta-prop_WDR3_2nd PF25172 113 - 228 8.2e-17 WDR3 second beta-propeller domain
Beta-prop_EML_2 PF23414 125 - 286 3.4e-21 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR19_1st PF23389 127 - 281 1.4e-06 WDR19 first beta-propeller
Beta-prop_EML PF23409 130 - 225 5.4e-07 Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_WDR36-Utp21_2nd PF25168 145 - 217 4.4e-07 WDR36/Utp21 second beta-propeller domain
WD40 PF00400 149 - 187 2.2e-10 WD domain, G-beta repeat
Beta-prop_Aladin PF25460 152 - 281 5.6e-10 Aladin seven-bladed propeller
WD40_WDHD1_1st PF24817 154 - 197 3.7e-06 WDHD1 first WD40 domain
EIF3I PF24805 155 - 249 4e-10 EIF3I
Beta-prop_WDR36-Utp21_1st PF25171 175 - 319 1e-10 WDR36/Utp21 first beta-propeller
WD40_MABP1-WDR62_2nd PF24782 184 - 276 9e-08 MABP1/WDR62 second WD40 domain
WD40_CDC20-Fz PF24807 185 - 320 4.6e-21 CDC20/Fizzy WD40 domain
WD40 PF00400 192 - 230 1.2e-06 WD domain, G-beta repeat
Beta-prop_TEP1_2nd PF25047 198 - 320 2.2e-11 TEP-1 second beta-propeller
Beta-prop_NWD2_C PF23586 198 - 307 6.1e-06 NWD2 C-terminal beta-propeller
Beta-prop_WDR3_1st PF25173 201 - 319 7.9e-22 WDR3 first beta-propeller domain
WD40_WDHD1_1st PF24817 203 - 248 2.3e-06 WDHD1 first WD40 domain
EIF3I PF24805 204 - 289 1.8e-07 EIF3I
Beta-prop_WDR3_2nd PF25172 205 - 319 3e-13 WDR3 second beta-propeller domain
Beta-prop_ACSF4 PF13570 210 - 309 1e-06 Beta-alanine-activating enzyme, beta-propeller
Beta-prop_EML PF23409 225 - 307 8.6e-09 Echinoderm microtubule-associated protein first beta-propeller
WD40 PF00400 234 - 274 1.9e-06 WD domain, G-beta repeat
WD40_Prp19 PF24814 243 - 321 3.1e-11 Prp19 WD40 domain
WD40_WDHD1_1st PF24817 257 - 321 1.1e-07 WDHD1 first WD40 domain
Beta-prop_THOC3 PF25174 258 - 319 1.7e-11 THOC3 beta-propeller domain
WD40 PF00400 280 - 318 8.9e-08 WD domain, G-beta repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 230
AccI GTMKAC 1 cut(s) 14
AccII CGCG 1 cut(s) 342
AciI CCGC 8 cut(s) 109, 129, 145, 201, 252, 340, 342, 792
AclWI GGATC 1 cut(s) 473
AcoI YGGCCR 3 cut(s) 64, 106, 489
AcsI RAATTY 2 cut(s) 92, 740
AcuI CTGAAG 1 cut(s) 819
AcyI GRCGYC 2 cut(s) 87, 231
AfiI CCNNNNNNNGG 5 cut(s) 226, 261, 268, 304, 342
AgsI TTSAA 4 cut(s) 376, 502, 695, 738
AjiI CACGTC 1 cut(s) 310
AjnI CCWGG 2 cut(s) 225, 554
AjuI GAANNNNNNNTTGG 2 cut(s) 344, 376
AluBI AGCT 2 cut(s) 185, 534
AluI AGCT 2 cut(s) 185, 534
Alw21I GWGCWC 1 cut(s) 925
Alw26I GTCTC 3 cut(s) 238, 277, 403
Alw44I GTGCAC 1 cut(s) 921
AlwI GGATC 1 cut(s) 473
AoxI GGCC 6 cut(s) 64, 106, 217, 276, 489, 724
ApaLI GTGCAC 1 cut(s) 921
ApoI RAATTY 2 cut(s) 92, 740
AspLEI GCGC 2 cut(s) 77, 368
AspS9I GGNCC 3 cut(s) 217, 238, 552
AsuC2I CCSGG 3 cut(s) 262, 571, 611
AsuHPI GGTGA 2 cut(s) 187, 884
AsuII TTCGAA 1 cut(s) 51
AvaII GGWCC 2 cut(s) 238, 552
BaeGI GKGCMC 2 cut(s) 348, 925
BbsI GAAGAC 1 cut(s) 352
Bbv12I GWGCWC 1 cut(s) 925
BccI CCATC 5 cut(s) 31, 86, 149, 200, 533
BceAI ACGGC 4 cut(s) 121, 476, 504, 526
BciT130I CCWGG 2 cut(s) 227, 556
BcnI CCSGG 3 cut(s) 262, 571, 611
BcoDI GTCTC 3 cut(s) 238, 277, 403
BfoI RGCGCY 1 cut(s) 78
BglI GCCNNNNNGGC 1 cut(s) 117
BglII AGATCT 1 cut(s) 948
BisI GCNGC 1 cut(s) 109
BlsI GCNGC 1 cut(s) 110
Bme1390I CCNGG 5 cut(s) 227, 262, 556, 571, 611
Bme18I GGWCC 2 cut(s) 238, 552
BmgBI CACGTC 1 cut(s) 310
BmgT120I GGNCC 3 cut(s) 217, 238, 552
BmiI GGNNCC 2 cut(s) 21, 121
BmrFI CCNGG 5 cut(s) 227, 262, 556, 571, 611
BmrI ACTGGG 1 cut(s) 376
BmsI GCATC 2 cut(s) 550, 923
BmuI ACTGGG 1 cut(s) 376
BpiI GAAGAC 1 cut(s) 352
Bpu14I TTCGAA 1 cut(s) 51
BpuEI CTTGAG 1 cut(s) 440
BpuMI CCSGG 3 cut(s) 262, 571, 611
BsaBI GATNNNNATC 2 cut(s) 501, 603
BsaHI GRCGYC 2 cut(s) 87, 231
BsaI GGTCTC 1 cut(s) 277
BsaJI CCNNGG 5 cut(s) 115, 226, 340, 555, 609
BsaWI WCCGGW 2 cut(s) 443, 481
BsaXI ACNNNNNCTCC 3 cut(s) 26, 143, 173
Bsc4I CCNNNNNNNGG 5 cut(s) 226, 261, 268, 304, 342
Bse118I RCCGGY 3 cut(s) 62, 317, 466
Bse1I ACTGG 2 cut(s) 382, 703
Bse3DI GCAATG 2 cut(s) 15, 574
Bse8I GATNNNNATC 2 cut(s) 501, 603
BseBI CCWGG 2 cut(s) 227, 556
BseDI CCNNGG 5 cut(s) 115, 226, 340, 555, 609
BseGI GGATG 3 cut(s) 141, 439, 565
BseJI GATNNNNATC 2 cut(s) 501, 603
BseLI CCNNNNNNNGG 5 cut(s) 226, 261, 268, 304, 342
BseMI GCAATG 2 cut(s) 15, 574
BseMII CTCAG 1 cut(s) 668
BseNI ACTGG 2 cut(s) 382, 703
BseRI GAGGAG 8 cut(s) 88, 104, 112, 115, 151, 154, 157, 160
BseSI GKGCMC 2 cut(s) 348, 925
BseX3I CGGCCG 2 cut(s) 106, 489
BseYI CCCAGC 1 cut(s) 181
Bsh1236I CGCG 1 cut(s) 342
Bsh1285I CGRYCG 2 cut(s) 109, 492
BshFI GGCC 6 cut(s) 66, 108, 219, 278, 491, 726
BsiEI CGRYCG 2 cut(s) 109, 492
BsiHKAI GWGCWC 1 cut(s) 925
BslFI GGGAC 2 cut(s) 320, 521
BslI CCNNNNNNNGG 5 cut(s) 226, 261, 268, 304, 342
BsmAI GTCTC 3 cut(s) 238, 277, 403
BsmBI CGTCTC 2 cut(s) 238, 403
BsmFI GGGAC 2 cut(s) 320, 521
BsnI GGCC 6 cut(s) 66, 108, 219, 278, 491, 726
Bso31I GGTCTC 1 cut(s) 277
Bsp119I TTCGAA 1 cut(s) 51
Bsp1286I GDGCHC 2 cut(s) 348, 925
Bsp143I GATC 4 cut(s) 393, 478, 802, 948
BspACI CCGC 8 cut(s) 109, 129, 145, 201, 252, 340, 342, 792
BspANI GGCC 6 cut(s) 66, 108, 219, 278, 491, 726
BspCNI CTCAG 1 cut(s) 669
BspFNI CGCG 1 cut(s) 342
BspLI GGNNCC 2 cut(s) 21, 121
BspPI GGATC 1 cut(s) 473
BspT104I TTCGAA 1 cut(s) 51
BspTNI GGTCTC 1 cut(s) 277
BsrDI GCAATG 2 cut(s) 15, 574
BsrFI RCCGGY 3 cut(s) 62, 317, 466
BsrI ACTGG 2 cut(s) 382, 703
BssAI RCCGGY 3 cut(s) 62, 317, 466
BssECI CCNNGG 5 cut(s) 115, 226, 340, 555, 609
BssMI GATC 4 cut(s) 393, 478, 802, 948
BssNI GRCGYC 2 cut(s) 87, 231
Bst2UI CCWGG 2 cut(s) 227, 556
Bst4CI ACNGT 3 cut(s) 421, 874, 943
BstACI GRCGYC 2 cut(s) 87, 231
BstAPI GCANNNNNTGC 1 cut(s) 920
BstBI TTCGAA 1 cut(s) 51
BstC8I GCNNGC 2 cut(s) 344, 468
BstDEI CTNAG 2 cut(s) 677, 957
BstDSI CCRYGG 1 cut(s) 340
BstF5I GGATG 3 cut(s) 141, 439, 565
BstFNI CGCG 1 cut(s) 342
BstH2I RGCGCY 1 cut(s) 78
BstHHI GCGC 2 cut(s) 77, 368
BstKTI GATC 4 cut(s) 396, 481, 805, 951
BstMAI GTCTC 3 cut(s) 238, 277, 403
BstMBI GATC 4 cut(s) 393, 478, 802, 948
BstMCI CGRYCG 2 cut(s) 109, 492
BstMWI GCNNNNNNNGC 4 cut(s) 72, 117, 251, 920
BstNI CCWGG 2 cut(s) 227, 556
BstSCI CCNGG 5 cut(s) 225, 260, 554, 569, 609
BstSLI GKGCMC 2 cut(s) 348, 925
BstUI CGCG 1 cut(s) 342
BstV2I GAAGAC 1 cut(s) 352
BstX2I RGATCY 1 cut(s) 948
BstYI RGATCY 1 cut(s) 948
BstZI CGGCCG 2 cut(s) 106, 489
BsuRI GGCC 6 cut(s) 66, 108, 219, 278, 491, 726
BtgI CCRYGG 1 cut(s) 340
BtrI CACGTC 1 cut(s) 310
BtsCI GGATG 3 cut(s) 141, 439, 565
BtsIMutI CAGTG 1 cut(s) 864
Cac8I GCNNGC 2 cut(s) 344, 468
CfoI GCGC 2 cut(s) 77, 368
Cfr10I RCCGGY 3 cut(s) 62, 317, 466
Cfr13I GGNCC 3 cut(s) 217, 238, 552
Cfr42I CCGCGG 1 cut(s) 343
CseI GACGC 2 cut(s) 76, 220
CviAII CATG 3 cut(s) 268, 391, 888
DdeI CTNAG 2 cut(s) 677, 957
DpnI GATC 4 cut(s) 395, 480, 804, 950
DpnII GATC 4 cut(s) 393, 478, 802, 948
DrdI GACNNNNNNGTC 1 cut(s) 230
DseDI GACNNNNNNGTC 1 cut(s) 230
EaeI YGGCCR 3 cut(s) 64, 106, 489
EagI CGGCCG 2 cut(s) 106, 489
EciI GGCGGA 2 cut(s) 118, 241
EclXI CGGCCG 2 cut(s) 106, 489
Eco31I GGTCTC 1 cut(s) 277
Eco47I GGWCC 2 cut(s) 238, 552
Eco52I CGGCCG 2 cut(s) 106, 489
Eco57I CTGAAG 1 cut(s) 819
EcoO109I RGGNCCY 1 cut(s) 552
EcoRII CCWGG 2 cut(s) 225, 554
Esp3I CGTCTC 2 cut(s) 238, 403
FaeI CATG 3 cut(s) 271, 394, 891
FaiI YATR 6 cut(s) 269, 392, 814, 878, 889, 908
FaqI GGGAC 2 cut(s) 320, 521
FatI CATG 3 cut(s) 267, 390, 887
FauI CCCGC 2 cut(s) 208, 335
FblI GTMKAC 1 cut(s) 14
Fnu4HI GCNGC 1 cut(s) 109
FokI GGATG 3 cut(s) 128, 446, 572
Fsp4HI GCNGC 1 cut(s) 109
GlaI GCGC 2 cut(s) 76, 367
GluI GCNGC 1 cut(s) 109
GsaI CCCAGC 1 cut(s) 185
HaeII RGCGCY 1 cut(s) 78
HaeIII GGCC 6 cut(s) 66, 108, 219, 278, 491, 726
HgaI GACGC 2 cut(s) 76, 220
HhaI GCGC 2 cut(s) 77, 368
Hin1I GRCGYC 2 cut(s) 87, 231
Hin1II CATG 3 cut(s) 271, 394, 891
Hin6I GCGC 2 cut(s) 75, 366
HinP1I GCGC 2 cut(s) 75, 366
HincII GTYRAC 1 cut(s) 15
HindII GTYRAC 1 cut(s) 15
HinfI GANTC 4 cut(s) 176, 257, 604, 955
HphI GGTGA 2 cut(s) 187, 884
Hpy166II GTNNAC 2 cut(s) 15, 923
Hpy188III TCNNGA 4 cut(s) 439, 506, 952, 959
Hpy8I GTNNAC 2 cut(s) 15, 923
Hpy99I CGWCG 4 cut(s) 19, 107, 287, 416
HpyAV CCTTC 3 cut(s) 220, 256, 851
HpyCH4III ACNGT 3 cut(s) 421, 874, 943
HpyCH4IV ACGT 2 cut(s) 309, 357
HpyCH4V TGCA 5 cut(s) 579, 747, 829, 914, 923
HpyF10VI GCNNNNNNNGC 4 cut(s) 72, 117, 251, 920
HpyF3I CTNAG 2 cut(s) 677, 957
HpySE526I ACGT 2 cut(s) 309, 357
Hsp92I GRCGYC 2 cut(s) 87, 231
Hsp92II CATG 3 cut(s) 271, 394, 891
HspAI GCGC 2 cut(s) 75, 366
KroI GCCGGC 1 cut(s) 466
KroNI GCCGGC 1 cut(s) 468
KspI CCGCGG 1 cut(s) 343
Kzo9I GATC 4 cut(s) 393, 478, 802, 948
LmnI GCTCC 3 cut(s) 19, 125, 190
LweI GCATC 2 cut(s) 550, 923
MaeII ACGT 2 cut(s) 309, 357
MaeIII GTNAC 4 cut(s) 484, 766, 860, 890
MalI GATC 4 cut(s) 395, 480, 804, 950
MboI GATC 4 cut(s) 393, 478, 802, 948
MboII GAAGA 4 cut(s) 352, 744, 812, 958
MflI RGATCY 1 cut(s) 948
MhlI GDGCHC 2 cut(s) 348, 925
MluCI AATT 5 cut(s) 92, 740, 824, 851, 909
MlyI GAGTC 3 cut(s) 170, 251, 949
MmeI TCCRAC 5 cut(s) 126, 198, 212, 306, 411
MroNI GCCGGC 1 cut(s) 466
MspA1I CMGCKG 1 cut(s) 342
MspR9I CCNGG 5 cut(s) 227, 262, 556, 571, 611
MvaI CCWGG 2 cut(s) 227, 556
MvnI CGCG 1 cut(s) 342
MwoI GCNNNNNNNGC 4 cut(s) 72, 117, 251, 920
NaeI GCCGGC 1 cut(s) 468
NciI CCSGG 3 cut(s) 262, 571, 611
NdeII GATC 4 cut(s) 393, 478, 802, 948
NgoMIV GCCGGC 1 cut(s) 466
NlaIII CATG 3 cut(s) 271, 394, 891
NlaIV GGNNCC 2 cut(s) 21, 121
NmeAIII GCCGAG 2 cut(s) 96, 254
NmuCI GTSAC 4 cut(s) 484, 766, 860, 890
NspV TTCGAA 1 cut(s) 51
PcsI WCGNNNNNNNCGW 2 cut(s) 219, 228
PdiI GCCGGC 1 cut(s) 468
PfeI GAWTC 1 cut(s) 604
PkrI GCNGC 1 cut(s) 110
PleI GAGTC 3 cut(s) 170, 251, 949
PpsI GAGTC 3 cut(s) 170, 251, 949
PpuMI RGGWCCY 1 cut(s) 552
Psp5II RGGWCCY 1 cut(s) 552
Psp6I CCWGG 2 cut(s) 225, 554
PspFI CCCAGC 1 cut(s) 181
PspGI CCWGG 2 cut(s) 225, 554
PspN4I GGNNCC 2 cut(s) 21, 121
PspPI GGNCC 3 cut(s) 217, 238, 552
PspPPI RGGWCCY 1 cut(s) 552
PsuI RGATCY 1 cut(s) 948
SacII CCGCGG 1 cut(s) 343
SalI GTCGAC 1 cut(s) 13
SatI GCNGC 1 cut(s) 109
Sau3AI GATC 4 cut(s) 393, 478, 802, 948
Sau96I GGNCC 3 cut(s) 217, 238, 552
SchI GAGTC 3 cut(s) 170, 251, 949
ScrFI CCNGG 5 cut(s) 227, 262, 556, 571, 611
SduI GDGCHC 2 cut(s) 348, 925
SfaNI GCATC 2 cut(s) 550, 923
Sfr303I CCGCGG 1 cut(s) 343
SfuI TTCGAA 1 cut(s) 51
SgrBI CCGCGG 1 cut(s) 343
SinI GGWCC 2 cut(s) 238, 552
SmlI CTYRAG 1 cut(s) 455
SmoI CTYRAG 1 cut(s) 455
Sse9I AATT 5 cut(s) 92, 740, 824, 851, 909
SsiI CCGC 8 cut(s) 109, 129, 145, 201, 252, 340, 342, 792
StyD4I CCNGG 5 cut(s) 225, 260, 554, 569, 609
TaaI ACNGT 3 cut(s) 421, 874, 943
TaiI ACGT 2 cut(s) 312, 360
TaqI TCGA 6 cut(s) 14, 51, 213, 411, 515, 527
TasI AATT 5 cut(s) 92, 740, 824, 851, 909
TauI GCSGC 1 cut(s) 111
TfiI GAWTC 1 cut(s) 604
TscAI CASTG 1 cut(s) 871
TseFI GTSAC 4 cut(s) 484, 766, 860, 890
Tsp45I GTSAC 4 cut(s) 484, 766, 860, 890
TspDTI ATGAA 3 cut(s) 256, 637, 876
TspGWI ACGGA 1 cut(s) 32
TspRI CASTG 1 cut(s) 871
VneI GTGCAC 1 cut(s) 921
VpaK11BI GGWCC 2 cut(s) 238, 552
XapI RAATTY 2 cut(s) 92, 740
XmiI GTMKAC 1 cut(s) 14
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.