Rroxscaffold_6G00399940

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0000068
Physical Location & Seq
Forward (+)
21991896 .. 21994145
2250 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00399940.1

Sequence Viewer

Length: 1197 bp
ATGTCAGACTACTTTCCTGAGGAAATCATACAAAGAATCCTGTTGAGGTTGCCTACGAAATCCCTAATCAAATCCACCCTAGTCTGCAAGTCATGGATGTCACTCATCAAATCCTCTAACTTCATTCAATCCCATCTCTCCACCACAATCGACACCAACAACCAAAACGATACCCACCTCCTCCTCCTCAGCGCTTTCTCTTACGAAGTTTCTGATCGTCTGCACTGGTTGCATTGGGATACCCCTGAATTTGGTGAGTATTCCTTGCTTGCAGACCCAGTCACTTTCTTGGAAAACGAAACTATTTTCGATCTGGATGCAGTCGGAACTTGTAATGGGCTCATATGCCTTGCGCCTGACCTAGCTGATAATCATTCCCCCACTTTAATTTGGAACCCATGTATTAGAAAGATTGTGATTTTGCCTAGCCCACCTGCTTGTTTTACCTCTACTCAGTATGATGAATGCATAGGCTTTGGCTATGATTCACATTCCAATGACTATAAGGTGTTGAGAATTATGACTCTTCCTGATGATCATTCGGACTTGTCCCGATTCGCCACCGTGGTTCAGGTTCACTCATTAGCCAGGGGCTCCTGGAAGACTCTTGATGCCTCTGTTGTTCCTGTAGATTTGCAGGGTGGTCCTGGTATTGTACTATTTCTCAATGGTTCTCTGCATATGCTTGAAGTTCGTTTAAGTGTCGGATATGATGATCATGCGGATGAATATTGTAAGTATGGTGGAGATACTTTCATTGCTTCATTTGATATGGCCACCGAATTATTTGGCGAGGTGATTATTCCAGAAGCTTTGCAGAGCAACAGATGTACGATTTCAAAATATGGGGACTCCCTTGCCTTGATTAAGCATAATGATAATAGCTGTGGTTGTGACATATGGGTAATGAAAGAGTATGGTGTCACAGAGTCGTGGACATATTTGTACAAGATAGCTGGGTTTCAAGATCGTATATATGGTTTCAAAAGGTGTGGGGAGGTTGTTCTGAGTGACGAAAATAGTCATGGTCGGTTAAGAATGATTTCGCTGGATCCTAAGAGCAAACAAGTTCAAGTTTTCGGAAATAAGGATTTTACTTACTACTTCATGGATTCTTTTGTAGAGAGTCTCATCTTGCTTGACCACGTCAATGCCATTTCGTACCAACGAGCAAGGAAGAAAAAAATGAGGCGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

398

Amino Acids

45.19

Weight (kDa)

5.36

Isoelectric Point (pI)

35.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 5 - 42 3.7e-09 F-box domain
F-box-like PF12937 6 - 38 2.6e-06 F-box-like
FBA_1 PF07734 102 - 358 1.5e-24 F-box associated beta propeller domain
FBA_3 PF08268 106 - 382 1.6e-19 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 442
Acc36I ACCTGC 1 cut(s) 442
AciI CCGC 2 cut(s) 722, 1192
AclWI GGATC 2 cut(s) 1046, 1059
AcoI YGGCCR 1 cut(s) 774
AcsI RAATTY 1 cut(s) 248
AfaI GTAC 4 cut(s) 657, 832, 947, 1163
AfeI AGCGCT 1 cut(s) 193
AfiI CCNNNNNNNGG 1 cut(s) 251
AgsI TTSAA 6 cut(s) 128, 689, 840, 965, 985, 1073
AjiI CACGTC 1 cut(s) 1147
AjnI CCWGG 3 cut(s) 587, 596, 646
AluBI AGCT 4 cut(s) 365, 812, 885, 956
AluI AGCT 4 cut(s) 365, 812, 885, 956
Alw26I GTCTC 1 cut(s) 1133
AlwI GGATC 2 cut(s) 1046, 1059
Aor51HI AGCGCT 1 cut(s) 193
AoxI GGCC 1 cut(s) 774
ApoI RAATTY 1 cut(s) 248
Asp700I GAANNNNTTC 1 cut(s) 1042
AspLEI GCGC 2 cut(s) 194, 355
AspS9I GGNCC 1 cut(s) 644
AsuHPI GGTGA 2 cut(s) 266, 808
AvaII GGWCC 1 cut(s) 644
AxyI CCTNAGG 1 cut(s) 18
BalI TGGCCA 1 cut(s) 776
BamHI GGATCC 1 cut(s) 1051
BanII GRGCYC 2 cut(s) 342, 596
BbsI GAAGAC 1 cut(s) 608
BbvCI CCTCAGC 1 cut(s) 188
BccI CCATC 1 cut(s) 141
BcgI CGANNNNNNTGC 2 cut(s) 299, 333
BciT130I CCWGG 3 cut(s) 589, 598, 648
BciVI GTATCC 1 cut(s) 232
BclI TGATCA 2 cut(s) 535, 715
BcoDI GTCTC 1 cut(s) 1133
BfaI CTAG 3 cut(s) 80, 362, 426
BfmI CTRYAG 1 cut(s) 627
BfoI RGCGCY 1 cut(s) 195
BfuAI ACCTGC 1 cut(s) 442
BfuI GTATCC 1 cut(s) 232
Bme1390I CCNGG 3 cut(s) 589, 598, 648
Bme18I GGWCC 1 cut(s) 644
BmgBI CACGTC 1 cut(s) 1147
BmgT120I GGNCC 1 cut(s) 644
BmiI GGNNCC 3 cut(s) 395, 595, 1053
BmrFI CCNGG 3 cut(s) 589, 598, 648
BmrI ACTGGG 1 cut(s) 272
BmsI GCATC 2 cut(s) 307, 601
BmuI ACTGGG 1 cut(s) 272
BpiI GAAGAC 1 cut(s) 608
Bpu10I CCTNAGC 1 cut(s) 188
BsaJI CCNNGG 2 cut(s) 564, 588
Bsc4I CCNNNNNNNGG 1 cut(s) 251
Bse1I ACTGG 2 cut(s) 230, 278
Bse21I CCTNAGG 1 cut(s) 18
Bse3DI GCAATG 1 cut(s) 756
BseBI CCWGG 3 cut(s) 589, 598, 648
BseDI CCNNGG 2 cut(s) 564, 588
BseGI GGATG 3 cut(s) 102, 322, 730
BseLI CCNNNNNNNGG 1 cut(s) 251
BseMI GCAATG 1 cut(s) 756
BseMII CTCAG 4 cut(s) 9, 202, 467, 998
BseNI ACTGG 2 cut(s) 230, 278
BseRI GAGGAG 3 cut(s) 170, 173, 176
BseYI CCCAGC 1 cut(s) 956
BsgI GTGCAG 1 cut(s) 206
BshFI GGCC 1 cut(s) 776
BslFI GGGAC 2 cut(s) 535, 863
BslI CCNNNNNNNGG 1 cut(s) 251
BsmAI GTCTC 1 cut(s) 1133
BsmFI GGGAC 2 cut(s) 535, 863
BsmI GAATGC 1 cut(s) 470
BsnI GGCC 1 cut(s) 776
Bsp1286I GDGCHC 2 cut(s) 342, 596
Bsp1407I TGTACA 1 cut(s) 945
Bsp143I GATC 6 cut(s) 214, 310, 535, 715, 967, 1051
BspACI CCGC 2 cut(s) 722, 1192
BspANI GGCC 1 cut(s) 776
BspCNI CTCAG 4 cut(s) 10, 201, 466, 999
BspLI GGNNCC 3 cut(s) 395, 595, 1053
BspMI ACCTGC 1 cut(s) 442
BspPI GGATC 2 cut(s) 1046, 1059
BsrDI GCAATG 1 cut(s) 756
BsrGI TGTACA 1 cut(s) 945
BsrI ACTGG 2 cut(s) 230, 278
BssECI CCNNGG 2 cut(s) 564, 588
BssMI GATC 6 cut(s) 214, 310, 535, 715, 967, 1051
Bst2UI CCWGG 3 cut(s) 589, 598, 648
Bst4CI ACNGT 1 cut(s) 565
Bst6I CTCTTC 1 cut(s) 531
BstAPI GCANNNNNTGC 1 cut(s) 229
BstAUI TGTACA 1 cut(s) 945
BstC8I GCNNGC 1 cut(s) 270
BstDEI CTNAG 5 cut(s) 18, 188, 453, 1007, 1056
BstDSI CCRYGG 1 cut(s) 564
BstF5I GGATG 3 cut(s) 102, 322, 730
BstH2I RGCGCY 1 cut(s) 195
BstHHI GCGC 2 cut(s) 194, 355
BstKTI GATC 6 cut(s) 217, 313, 538, 718, 970, 1054
BstMAI GTCTC 1 cut(s) 1133
BstMBI GATC 6 cut(s) 214, 310, 535, 715, 967, 1051
BstMWI GCNNNNNNNGC 1 cut(s) 229
BstNI CCWGG 3 cut(s) 589, 598, 648
BstSCI CCNGG 3 cut(s) 587, 596, 646
BstSFI CTRYAG 1 cut(s) 627
BstV2I GAAGAC 1 cut(s) 608
BstX2I RGATCY 1 cut(s) 1051
BstYI RGATCY 1 cut(s) 1051
Bsu36I CCTNAGG 1 cut(s) 18
BsuI GTATCC 1 cut(s) 232
BsuRI GGCC 1 cut(s) 776
BtgI CCRYGG 1 cut(s) 564
BtrI CACGTC 1 cut(s) 1147
BtsCI GGATG 3 cut(s) 102, 322, 730
BtsIMutI CAGTG 1 cut(s) 223
BveI ACCTGC 1 cut(s) 442
Cac8I GCNNGC 1 cut(s) 270
CfoI GCGC 2 cut(s) 194, 355
Cfr13I GGNCC 1 cut(s) 644
Csp6I GTAC 4 cut(s) 656, 831, 946, 1162
CspCI CAANNNNNGTGG 2 cut(s) 973, 1008
CviAII CATG 5 cut(s) 93, 399, 719, 1025, 1108
CviQI GTAC 4 cut(s) 656, 831, 946, 1162
DdeI CTNAG 5 cut(s) 18, 188, 453, 1007, 1056
DpnI GATC 6 cut(s) 216, 312, 537, 717, 969, 1053
DpnII GATC 6 cut(s) 214, 310, 535, 715, 967, 1051
EaeI YGGCCR 1 cut(s) 774
Eam1104I CTCTTC 1 cut(s) 531
EarI CTCTTC 1 cut(s) 531
Eco24I GRGCYC 2 cut(s) 342, 596
Eco47I GGWCC 1 cut(s) 644
Eco47III AGCGCT 1 cut(s) 193
Eco81I CCTNAGG 1 cut(s) 18
EcoRII CCWGG 3 cut(s) 587, 596, 646
EcoT22I ATGCAT 1 cut(s) 470
EcoT38I GRGCYC 2 cut(s) 342, 596
FaeI CATG 5 cut(s) 96, 402, 722, 1028, 1111
FaqI GGGAC 2 cut(s) 535, 863
FatI CATG 5 cut(s) 92, 398, 718, 1024, 1107
FauNDI CATATG 3 cut(s) 344, 681, 899
FbaI TGATCA 2 cut(s) 535, 715
FokI GGATG 3 cut(s) 109, 329, 737
FriOI GRGCYC 2 cut(s) 342, 596
FspBI CTAG 3 cut(s) 80, 362, 426
GlaI GCGC 2 cut(s) 193, 354
GsaI CCCAGC 1 cut(s) 960
HaeII RGCGCY 1 cut(s) 195
HaeIII GGCC 1 cut(s) 776
HhaI GCGC 2 cut(s) 194, 355
Hin1II CATG 5 cut(s) 96, 402, 722, 1028, 1111
Hin6I GCGC 2 cut(s) 192, 353
HinP1I GCGC 2 cut(s) 192, 353
HindIII AAGCTT 1 cut(s) 810
HinfI GANTC 9 cut(s) 36, 485, 523, 555, 604, 851, 929, 1112, 1126
HphI GGTGA 2 cut(s) 266, 808
Hpy166II GTNNAC 2 cut(s) 577, 936
Hpy188I TCNGA 7 cut(s) 7, 214, 326, 544, 707, 1008, 1082
Hpy188III TCNNGA 7 cut(s) 17, 314, 530, 552, 608, 806, 965
Hpy8I GTNNAC 2 cut(s) 577, 936
HpyCH4III ACNGT 1 cut(s) 565
HpyCH4IV ACGT 1 cut(s) 1146
HpyCH4V TGCA 9 cut(s) 87, 223, 232, 272, 320, 468, 637, 679, 817
HpyF10VI GCNNNNNNNGC 1 cut(s) 229
HpyF3I CTNAG 5 cut(s) 18, 188, 453, 1007, 1056
HpySE526I ACGT 1 cut(s) 1146
Hsp92II CATG 5 cut(s) 96, 402, 722, 1028, 1111
HspAI GCGC 2 cut(s) 192, 353
Ksp22I TGATCA 2 cut(s) 535, 715
Kzo9I GATC 6 cut(s) 214, 310, 535, 715, 967, 1051
LmnI GCTCC 1 cut(s) 599
LweI GCATC 2 cut(s) 307, 601
MaeI CTAG 3 cut(s) 80, 362, 426
MaeII ACGT 1 cut(s) 1146
MaeIII GTNAC 5 cut(s) 99, 280, 893, 922, 1010
MalI GATC 6 cut(s) 216, 312, 537, 717, 969, 1053
MboI GATC 6 cut(s) 214, 310, 535, 715, 967, 1051
MboII GAAGA 3 cut(s) 518, 613, 1189
MflI RGATCY 1 cut(s) 1051
MhlI GDGCHC 2 cut(s) 342, 596
MlsI TGGCCA 1 cut(s) 776
MluCI AATT 4 cut(s) 248, 387, 516, 782
MluNI TGGCCA 1 cut(s) 776
MlyI GAGTC 5 cut(s) 517, 598, 845, 938, 1135
MmeI TCCRAC 2 cut(s) 304, 685
Mox20I TGGCCA 1 cut(s) 776
Mph1103I ATGCAT 1 cut(s) 470
MroXI GAANNNNTTC 1 cut(s) 1042
MscI TGGCCA 1 cut(s) 776
MseI TTAA 4 cut(s) 386, 698, 867, 1034
MslI CAYNNNNRTG 3 cut(s) 495, 723, 1149
Msp20I TGGCCA 1 cut(s) 776
MspR9I CCNGG 3 cut(s) 589, 598, 648
Mva1269I GAATGC 1 cut(s) 470
MvaI CCWGG 3 cut(s) 589, 598, 648
MwoI GCNNNNNNNGC 1 cut(s) 229
NdeI CATATG 3 cut(s) 344, 681, 899
NdeII GATC 6 cut(s) 214, 310, 535, 715, 967, 1051
NlaIII CATG 5 cut(s) 96, 402, 722, 1028, 1111
NlaIV GGNNCC 3 cut(s) 395, 595, 1053
NmuCI GTSAC 5 cut(s) 99, 280, 893, 922, 1010
NsiI ATGCAT 1 cut(s) 470
PaqCI CACCTGC 1 cut(s) 442
PctI GAATGC 1 cut(s) 470
PdmI GAANNNNTTC 1 cut(s) 1042
PfeI GAWTC 4 cut(s) 36, 485, 555, 1112
PflFI GACNNNGTC 2 cut(s) 278, 1145
PfoI TCCNGGA 1 cut(s) 596
PleI GAGTC 5 cut(s) 517, 598, 845, 937, 1134
PpsI GAGTC 5 cut(s) 517, 598, 845, 937, 1134
Psp6I CCWGG 3 cut(s) 587, 596, 646
PspFI CCCAGC 1 cut(s) 956
PspGI CCWGG 3 cut(s) 587, 596, 646
PspN4I GGNNCC 3 cut(s) 395, 595, 1053
PspPI GGNCC 1 cut(s) 644
PsuI RGATCY 1 cut(s) 1051
PsyI GACNNNGTC 2 cut(s) 278, 1145
RsaI GTAC 4 cut(s) 657, 832, 947, 1163
RsaNI GTAC 4 cut(s) 656, 831, 946, 1162
RseI CAYNNNNRTG 3 cut(s) 495, 723, 1149
SaqAI TTAA 4 cut(s) 386, 698, 867, 1034
Sau3AI GATC 6 cut(s) 214, 310, 535, 715, 967, 1051
Sau96I GGNCC 1 cut(s) 644
SchI GAGTC 5 cut(s) 517, 598, 845, 938, 1135
ScrFI CCNGG 3 cut(s) 589, 598, 648
SduI GDGCHC 2 cut(s) 342, 596
SfaNI GCATC 2 cut(s) 307, 601
SfcI CTRYAG 1 cut(s) 627
SinI GGWCC 1 cut(s) 644
SmiMI CAYNNNNRTG 3 cut(s) 495, 723, 1149
Sse9I AATT 4 cut(s) 248, 387, 516, 782
SsiI CCGC 2 cut(s) 722, 1192
SspI AATATT 1 cut(s) 731
SspMI CTAG 3 cut(s) 80, 362, 426
StyD4I CCNGG 3 cut(s) 587, 596, 646
TaaI ACNGT 1 cut(s) 565
TaiI ACGT 1 cut(s) 1149
TaqI TCGA 2 cut(s) 150, 309
TasI AATT 4 cut(s) 248, 387, 516, 782
TatI WGTACW 2 cut(s) 655, 945
TfiI GAWTC 4 cut(s) 36, 485, 555, 1112
Tru1I TTAA 4 cut(s) 386, 698, 867, 1034
Tru9I TTAA 4 cut(s) 386, 698, 867, 1034
TscAI CASTG 1 cut(s) 230
TseFI GTSAC 5 cut(s) 99, 280, 893, 922, 1010
Tsp45I GTSAC 5 cut(s) 99, 280, 893, 922, 1010
TspDTI ATGAA 7 cut(s) 112, 477, 741, 745, 753, 923, 1096
TspRI CASTG 1 cut(s) 230
Tth111I GACNNNGTC 2 cut(s) 278, 1145
VpaK11BI GGWCC 1 cut(s) 644
XapI RAATTY 1 cut(s) 248
XmnI GAANNNNTTC 1 cut(s) 1042
XspI CTAG 3 cut(s) 80, 362, 426
Zsp2I ATGCAT 1 cut(s) 470
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.