Rmu_co8269411.1_g000001

F-box kelch-repeat protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8269411.1
Physical Location & Seq
Forward (+)
1 .. 825
825 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8269411.1_g000001.1.cds

Sequence Viewer

Length: 715 bp
gaggaacaactaacccaacaaccgcatctcaaactcgacgcatccgatcagatacaaagcccagaggtctcatcggcgtagcggctccgacgatgaagacccaaaatcaacaatggggagtcgaagactactttcctgaagaaatcgtggacaaaatcctgttgaagttgcccgtcaaagaggttatcagatgcagcgccgtgtgcaagttatggaactctctcatcaaaaaccctaccttcgttcaaacccacctcaagaatcaaacccacgacggcgtttcggagctcctcctactcagctcccaccaatcagacgatctgcattgggataaccctgcagctttattcggtcagtattccaacctccgaaatccaattcacaacgacgacgacagtagcaattggaccaaaggtatcagttaccaagtggtcggaacttgtaacggactcgtatgcctttctctttactcatttgaccgtgacccatgccctcctgtaattctctggaatccatccattagaaagttcgggtttttgcctagtccaagtcttgccactgattgctgccggaatgaaagttattatttctgctatgattctcgtattgatgattataaggttgtgagaattgtcgagagaatccatcgcgaggttgaggtctggtccttagcctcaggaggtgcttggaagagtcttaataatgttcctgccga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

237

Amino Acids

26.8

Weight (kDa)

7.13

Isoelectric Point (pI)

38.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 617
AccII CGCG 1 cut(s) 650
AciI CCGC 2 cut(s) 23, 82
AcuI CTGAAG 1 cut(s) 158
AfiI CCNNNNNNNGG 1 cut(s) 651
AgsI TTSAA 2 cut(s) 165, 247
AluBI AGCT 3 cut(s) 288, 302, 343
AluI AGCT 3 cut(s) 288, 302, 343
Alw21I GWGCWC 1 cut(s) 290
Alw26I GTCTC 1 cut(s) 73
ApeKI GCWGC 3 cut(s) 194, 340, 566
AspLEI GCGC 1 cut(s) 199
AspS9I GGNCC 2 cut(s) 407, 665
AvaII GGWCC 2 cut(s) 407, 665
AxyI CCTNAGG 1 cut(s) 675
BanII GRGCYC 1 cut(s) 290
BbsI GAAGAC 2 cut(s) 103, 131
Bbv12I GWGCWC 1 cut(s) 290
BbvI GCAGC 3 cut(s) 206, 352, 553
BccI CCATC 2 cut(s) 522, 653
BceAI ACGGC 2 cut(s) 184, 291
BcoDI GTCTC 1 cut(s) 73
BfaI CTAG 1 cut(s) 542
BfmI CTRYAG 1 cut(s) 338
BfoI RGCGCY 1 cut(s) 200
BisI GCNGC 4 cut(s) 83, 195, 341, 567
BlsI GCNGC 4 cut(s) 84, 196, 342, 568
Bme18I GGWCC 2 cut(s) 407, 665
BmgT120I GGNCC 2 cut(s) 407, 665
BmiI GGNNCC 1 cut(s) 86
BmsI GCATC 3 cut(s) 34, 50, 181
BpiI GAAGAC 2 cut(s) 103, 131
Bpu10I CCTNAGC 1 cut(s) 669
BpuEI CTTGAG 1 cut(s) 241
BsaI GGTCTC 1 cut(s) 73
Bsc4I CCNNNNNNNGG 1 cut(s) 651
Bse21I CCTNAGG 1 cut(s) 675
BseGI GGATG 2 cut(s) 41, 514
BseLI CCNNNNNNNGG 1 cut(s) 651
BseMII CTCAG 2 cut(s) 312, 689
BseRI GAGGAG 1 cut(s) 280
BseXI GCAGC 3 cut(s) 206, 352, 553
Bsh1236I CGCG 1 cut(s) 650
BsiHKAI GWGCWC 1 cut(s) 290
BsiSI CCGG 1 cut(s) 570
BslI CCNNNNNNNGG 1 cut(s) 651
BsmAI GTCTC 1 cut(s) 73
Bso31I GGTCTC 1 cut(s) 73
Bsp1286I GDGCHC 1 cut(s) 290
Bsp143I GATC 2 cut(s) 46, 318
Bsp68I TCGCGA 1 cut(s) 650
BspACI CCGC 2 cut(s) 23, 82
BspCNI CTCAG 2 cut(s) 311, 688
BspFNI CGCG 1 cut(s) 650
BspLI GGNNCC 1 cut(s) 86
BspMAI CTGCAG 1 cut(s) 342
BspTNI GGTCTC 1 cut(s) 73
BssMI GATC 2 cut(s) 46, 318
Bst4CI ACNGT 2 cut(s) 397, 481
Bst6I CTCTTC 1 cut(s) 685
BstDEI CTNAG 3 cut(s) 298, 669, 675
BstF5I GGATG 2 cut(s) 41, 514
BstFNI CGCG 1 cut(s) 650
BstH2I RGCGCY 1 cut(s) 200
BstHHI GCGC 1 cut(s) 199
BstKTI GATC 2 cut(s) 49, 321
BstMAI GTCTC 1 cut(s) 73
BstMBI GATC 2 cut(s) 46, 318
BstMWI GCNNNNNNNGC 1 cut(s) 203
BstSFI CTRYAG 1 cut(s) 338
BstUI CGCG 1 cut(s) 650
BstV1I GCAGC 3 cut(s) 206, 352, 553
BstV2I GAAGAC 2 cut(s) 103, 131
Bsu36I CCTNAGG 1 cut(s) 675
BtgZI GCGATG 1 cut(s) 631
BtsCI GGATG 2 cut(s) 41, 514
BtsIMutI CAGTG 1 cut(s) 557
BtuMI TCGCGA 1 cut(s) 650
CfoI GCGC 1 cut(s) 199
Cfr13I GGNCC 2 cut(s) 407, 665
CseI GACGC 1 cut(s) 47
CviAII CATG 1 cut(s) 488
CviJI RGCY 6 cut(s) 60, 85, 288, 302, 343, 673
CviKI_1 RGCY 6 cut(s) 60, 85, 288, 302, 343, 673
DdeI CTNAG 3 cut(s) 298, 669, 675
DpnI GATC 2 cut(s) 48, 320
DpnII GATC 2 cut(s) 46, 318
Eam1104I CTCTTC 1 cut(s) 685
EarI CTCTTC 1 cut(s) 685
Ecl136II GAGCTC 1 cut(s) 288
Eco24I GRGCYC 1 cut(s) 290
Eco31I GGTCTC 1 cut(s) 73
Eco47I GGWCC 2 cut(s) 407, 665
Eco53kI GAGCTC 1 cut(s) 288
Eco57I CTGAAG 1 cut(s) 158
Eco81I CCTNAGG 1 cut(s) 675
EcoICRI GAGCTC 1 cut(s) 288
EcoT38I GRGCYC 1 cut(s) 290
FaeI CATG 1 cut(s) 491
FaiI YATR 5 cut(s) 213, 456, 489, 596, 617
FatI CATG 1 cut(s) 487
Fnu4HI GCNGC 4 cut(s) 83, 195, 341, 567
FokI GGATG 2 cut(s) 28, 501
FriOI GRGCYC 1 cut(s) 290
Fsp4HI GCNGC 4 cut(s) 83, 195, 341, 567
FspBI CTAG 1 cut(s) 542
GlaI GCGC 1 cut(s) 198
GluI GCNGC 4 cut(s) 83, 195, 341, 567
HaeII RGCGCY 1 cut(s) 200
HapII CCGG 1 cut(s) 570
HgaI GACGC 1 cut(s) 47
HhaI GCGC 1 cut(s) 199
Hin1II CATG 1 cut(s) 491
Hin6I GCGC 1 cut(s) 197
HinP1I GCGC 1 cut(s) 197
HinfI GANTC 7 cut(s) 119, 261, 449, 510, 598, 641, 693
HpaII CCGG 1 cut(s) 570
Hpy166II GTNNAC 1 cut(s) 150
Hpy188I TCNGA 8 cut(s) 46, 51, 89, 190, 285, 315, 370, 436
Hpy188III TCNNGA 6 cut(s) 136, 258, 507, 636, 649, 677
Hpy8I GTNNAC 1 cut(s) 150
Hpy99I CGWCG 5 cut(s) 41, 93, 277, 391, 394
HpyAV CCTTC 1 cut(s) 249
HpyCH4III ACNGT 2 cut(s) 397, 481
HpyCH4V TGCA 4 cut(s) 194, 206, 324, 340
HpyF10VI GCNNNNNNNGC 1 cut(s) 203
HpyF3I CTNAG 3 cut(s) 298, 669, 675
Hsp92II CATG 1 cut(s) 491
HspAI GCGC 1 cut(s) 197
Kzo9I GATC 2 cut(s) 46, 318
LmnI GCTCC 4 cut(s) 90, 285, 293, 307
LpnPI CCDG 9 cut(s) 75, 149, 172, 350, 492, 509, 583, 648, 662
Lsp1109I GCAGC 3 cut(s) 206, 352, 553
LweI GCATC 3 cut(s) 34, 50, 181
MaeI CTAG 1 cut(s) 542
MaeIII GTNAC 3 cut(s) 421, 442, 481
MalI GATC 2 cut(s) 48, 320
MboI GATC 2 cut(s) 46, 318
MboII GAAGA 4 cut(s) 108, 136, 151, 702
MfeI CAATTG 1 cut(s) 402
MhlI GDGCHC 1 cut(s) 290
MluCI AATT 4 cut(s) 377, 402, 500, 629
MlyI GAGTC 3 cut(s) 128, 443, 702
MmeI TCCRAC 3 cut(s) 112, 386, 414
MseI TTAA 1 cut(s) 698
MspI CCGG 1 cut(s) 570
MunI CAATTG 1 cut(s) 402
MvnI CGCG 1 cut(s) 650
MwoI GCNNNNNNNGC 1 cut(s) 203
NdeII GATC 2 cut(s) 46, 318
NlaIII CATG 1 cut(s) 491
NlaIV GGNNCC 1 cut(s) 86
NmuCI GTSAC 1 cut(s) 481
NruI TCGCGA 1 cut(s) 650
PcsI WCGNNNNNNNCGW 1 cut(s) 42
PfeI GAWTC 4 cut(s) 261, 510, 598, 641
PkrI GCNGC 4 cut(s) 84, 196, 342, 568
PleI GAGTC 3 cut(s) 127, 443, 701
PpsI GAGTC 3 cut(s) 127, 443, 701
PsiI TTATAA 1 cut(s) 617
Psp124BI GAGCTC 1 cut(s) 290
PspN4I GGNNCC 1 cut(s) 86
PspPI GGNCC 2 cut(s) 407, 665
PstI CTGCAG 1 cut(s) 342
RruI TCGCGA 1 cut(s) 650
SacI GAGCTC 1 cut(s) 290
SaqAI TTAA 1 cut(s) 698
SatI GCNGC 4 cut(s) 83, 195, 341, 567
Sau3AI GATC 2 cut(s) 46, 318
Sau96I GGNCC 2 cut(s) 407, 665
SchI GAGTC 3 cut(s) 128, 443, 702
SduI GDGCHC 1 cut(s) 290
SfaNI GCATC 3 cut(s) 34, 50, 181
SfcI CTRYAG 1 cut(s) 338
SinI GGWCC 2 cut(s) 407, 665
SmlI CTYRAG 1 cut(s) 256
SmoI CTYRAG 1 cut(s) 256
Sse9I AATT 4 cut(s) 377, 402, 500, 629
SsiI CCGC 2 cut(s) 23, 82
SspMI CTAG 1 cut(s) 542
SstI GAGCTC 1 cut(s) 290
TaaI ACNGT 2 cut(s) 397, 481
TaqI TCGA 3 cut(s) 36, 122, 635
TaqII GACCGA 1 cut(s) 340
TasI AATT 4 cut(s) 377, 402, 500, 629
TauI GCSGC 1 cut(s) 85
TfiI GAWTC 4 cut(s) 261, 510, 598, 641
Tru1I TTAA 1 cut(s) 698
Tru9I TTAA 1 cut(s) 698
TscAI CASTG 1 cut(s) 564
TseFI GTSAC 1 cut(s) 481
TseI GCWGC 3 cut(s) 194, 340, 566
Tsp45I GTSAC 1 cut(s) 481
TspDTI ATGAA 2 cut(s) 109, 590
TspGWI ACGGA 1 cut(s) 461
TspRI CASTG 1 cut(s) 564
VpaK11BI GGWCC 2 cut(s) 407, 665
XspI CTAG 1 cut(s) 542
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.