Prupe.5G081800_v2.0.a1

F-box domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0000068
Physical Location & Seq
Reverse (-)
9504564 .. 9507021
2458 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G081800.1

Sequence Viewer

Length: 1230 bp
ATGGATAACATACAAGATATCACACAAGGAATGCACGAATTGAAATTTGGAGAGATGGCAGCCTCTTTTCCTCAGGAAATCATACAAGAGATCCTAATTAGGCTGCCCGTTAAATCTACGGTCAAATGCACCTCAGTGTGCAAGGCATGGAGGTCCATGATCATAAACCCAAGCTTTATCCGAACCCACCTCAGCCCAACAGTCGATGACGTTCACCTCCTACTCCACAGAGTTTCTGGTTTGGAGGTGACCACCTTCCTCGGCAAAACGGTCATGGACAAGGTAGACGACGAGGTTCACTCTGTGCATTATGATAACCGGGCTTTCGACGAGTACGCCAAGATAGAATCTCCAATTGCTCGAAAGCAAGAACTGTGGAACTCACATCTTCGTGTGGTCGGCATTTGTGATGGGCTATTCTGCCTTGCGGATGATATCTACCGTTATGGTTACAACTTCTTTATATGGAACCCAGCCATTAGAAAGTTACTGACCCTTCCCAAGCCTAATGTTAGATTTGTTACACATCGTGGTTACGATGCCTCGATTGGATTTGGTTTTGATGCTATGACCAATGACTATAAGGTTGTGAGAGTTGTCACTTTATTGGATCAACGTGGGACACCAACTCTTGCTGAGGTTTATTCCCTGGCCACCGGCAAATGGAGCAGTCTTGGTTGTGTTTCTCCTACATGTCTAACAGATGGACGCGCATCCAGTGCTTTTGTTAATGGGTTTCTTCACTGGCCTGTATTCTGCAAAACAAATGGTGGTCTTTACTATTTTATATTGACTTTTGACCTGGGCAAGGAGGTCTTCCGTAAGATACCTATGCCGAAGATTATCCAATGGAAATACGACTTGGGTTTGCGATTGTCTCTTTCAGATAACAGAAAATCTATTGCTCTGTTCATGATAGATAACAGGTGTGAAGATTCTTTTCTTGAGATTTGGGTGATGAAAGAGTATGGCATAAAGGAGTCATGGACCAAACTGATTACCCTTGGTCCACAAGGTCCAGAAAGACTTTTACCCAGGGCCTTATATTTTAGGAAGAGTGGTGAAGTACTGGTGCTTCTCACTGACAAATCAAGGCAGGAACTAATATCACTAGACCTTGTGAGCAAACAGTTTAAAAATCTTGGGATTTCTGGATATCAATATTGCAATGTTGGTTTTTATAAAGAGAGCCTCCTATTACTCAACAAGAGCAATGCAGAGTCTTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1 FBA_3

Protein Analysis

410

Amino Acids

46.78

Weight (kDa)

8.57

Isoelectric Point (pI)

33.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1182
AccI GTMKAC 1 cut(s) 285
AccII CGCG 1 cut(s) 711
AciI CCGC 1 cut(s) 428
AclWI GGATC 2 cut(s) 85, 618
AcoI YGGCCR 1 cut(s) 651
AcsI RAATTY 1 cut(s) 44
AdeI CACNNNGTG 2 cut(s) 304, 530
AfaI GTAC 2 cut(s) 335, 1068
AfiI CCNNNNNNNGG 2 cut(s) 663, 808
AflIII ACRYGT 1 cut(s) 692
AgsI TTSAA 1 cut(s) 43
AjnI CCWGG 3 cut(s) 648, 801, 1034
AjuI GAANNNNNNNTTGG 4 cut(s) 30, 62, 845, 877
AleI CACNNNNGTG 1 cut(s) 134
AluBI AGCT 1 cut(s) 174
AluI AGCT 1 cut(s) 174
Alw26I GTCTC 1 cut(s) 882
AlwI GGATC 2 cut(s) 85, 618
AoxI GGCC 3 cut(s) 651, 746, 1038
ApeKI GCWGC 2 cut(s) 59, 103
ApoI RAATTY 1 cut(s) 44
AspLEI GCGC 1 cut(s) 713
AspS9I GGNCC 5 cut(s) 153, 987, 1007, 1016, 1038
AsuC2I CCSGG 1 cut(s) 320
AsuHPI GGTGA 4 cut(s) 206, 259, 967, 1073
AvaII GGWCC 4 cut(s) 153, 987, 1007, 1016
AxyI CCTNAGG 1 cut(s) 72
BalI TGGCCA 1 cut(s) 653
BarI GAAGNNNNNNTAC 2 cut(s) 1059, 1091
BbsI GAAGAC 1 cut(s) 808
BbvCI CCTCAGC 2 cut(s) 191, 636
BbvI GCAGC 2 cut(s) 71, 90
BccI CCATC 3 cut(s) 49, 404, 698
BciT130I CCWGG 3 cut(s) 650, 803, 1036
BclI TGATCA 1 cut(s) 159
BcnI CCSGG 1 cut(s) 320
BcoDI GTCTC 1 cut(s) 882
BfaI CTAG 1 cut(s) 1112
BisI GCNGC 2 cut(s) 60, 104
BlsI GCNGC 2 cut(s) 61, 105
BmcAI AGTACT 1 cut(s) 1068
Bme1390I CCNGG 4 cut(s) 320, 650, 803, 1036
Bme18I GGWCC 4 cut(s) 153, 987, 1007, 1016
BmgT120I GGNCC 5 cut(s) 153, 987, 1007, 1016, 1038
BmiI GGNNCC 1 cut(s) 470
BmrFI CCNGG 4 cut(s) 320, 650, 803, 1036
BmsI GCATC 3 cut(s) 529, 553, 722
BpiI GAAGAC 1 cut(s) 808
BplI GAGNNNNNCTC 2 cut(s) 284, 316
Bpu10I CCTNAGC 2 cut(s) 191, 636
BpuEI CTTGAG 1 cut(s) 965
BpuMI CCSGG 1 cut(s) 320
BsaJI CCNNGG 6 cut(s) 259, 648, 802, 1003, 1034, 1035
Bsc4I CCNNNNNNNGG 2 cut(s) 663, 808
Bse118I RCCGGY 1 cut(s) 656
Bse1I ACTGG 3 cut(s) 717, 749, 1074
Bse21I CCTNAGG 1 cut(s) 72
Bse3DI GCAATG 2 cut(s) 1174, 1219
BseBI CCWGG 3 cut(s) 650, 803, 1036
BseDI CCNNGG 6 cut(s) 259, 648, 802, 1003, 1034, 1035
BseGI GGATG 2 cut(s) 436, 713
BseLI CCNNNNNNNGG 2 cut(s) 663, 808
BseMI GCAATG 2 cut(s) 1174, 1219
BseMII CTCAG 4 cut(s) 86, 147, 205, 627
BseNI ACTGG 3 cut(s) 717, 749, 1074
BseXI GCAGC 2 cut(s) 71, 90
BseYI CCCAGC 1 cut(s) 472
Bsh1236I CGCG 1 cut(s) 711
BshFI GGCC 3 cut(s) 653, 748, 1040
BsiSI CCGG 2 cut(s) 319, 657
BslFI GGGAC 1 cut(s) 634
BslI CCNNNNNNNGG 2 cut(s) 663, 808
BsmAI GTCTC 1 cut(s) 882
BsmFI GGGAC 1 cut(s) 634
BsmI GAATGC 1 cut(s) 36
BsnI GGCC 3 cut(s) 653, 748, 1040
Bsp143I GATC 3 cut(s) 90, 159, 610
BspACI CCGC 1 cut(s) 428
BspANI GGCC 3 cut(s) 653, 748, 1040
BspCNI CTCAG 4 cut(s) 85, 146, 204, 628
BspFNI CGCG 1 cut(s) 711
BspHI TCATGA 1 cut(s) 912
BspLI GGNNCC 1 cut(s) 470
BspPI GGATC 2 cut(s) 85, 618
BsrDI GCAATG 2 cut(s) 1174, 1219
BsrFI RCCGGY 1 cut(s) 656
BsrI ACTGG 3 cut(s) 717, 749, 1074
BssAI RCCGGY 1 cut(s) 656
BssECI CCNNGG 6 cut(s) 259, 648, 802, 1003, 1034, 1035
BssMI GATC 3 cut(s) 90, 159, 610
BssT1I CCWWGG 1 cut(s) 1003
Bst2UI CCWGG 3 cut(s) 650, 803, 1036
Bst4CI ACNGT 6 cut(s) 121, 202, 271, 375, 443, 1131
Bst6I CTCTTC 1 cut(s) 1049
BstAPI GCANNNNNTGC 1 cut(s) 719
BstDEI CTNAG 4 cut(s) 72, 133, 191, 636
BstEII GGTNACC 1 cut(s) 247
BstENI CCTNNNNNAGG 1 cut(s) 806
BstF5I GGATG 2 cut(s) 436, 713
BstFNI CGCG 1 cut(s) 711
BstHHI GCGC 1 cut(s) 713
BstKTI GATC 3 cut(s) 93, 162, 613
BstMAI GTCTC 1 cut(s) 882
BstMBI GATC 3 cut(s) 90, 159, 610
BstMWI GCNNNNNNNGC 2 cut(s) 666, 719
BstNI CCWGG 3 cut(s) 650, 803, 1036
BstNSI RCATGY 1 cut(s) 696
BstPI GGTNACC 1 cut(s) 247
BstSCI CCNGG 4 cut(s) 318, 648, 801, 1034
BstUI CGCG 1 cut(s) 711
BstV1I GCAGC 2 cut(s) 71, 90
BstV2I GAAGAC 1 cut(s) 808
BstX2I RGATCY 1 cut(s) 90
BstYI RGATCY 1 cut(s) 90
Bsu36I CCTNAGG 1 cut(s) 72
BsuRI GGCC 3 cut(s) 653, 748, 1040
BtsCI GGATG 2 cut(s) 436, 713
BtsIMutI CAGTG 4 cut(s) 141, 724, 742, 1080
CciI TCATGA 1 cut(s) 912
CfoI GCGC 1 cut(s) 713
Cfr10I RCCGGY 1 cut(s) 656
Cfr13I GGNCC 5 cut(s) 153, 987, 1007, 1016, 1038
CseI GACGC 1 cut(s) 717
Csp6I GTAC 2 cut(s) 334, 1067
CspCI CAANNNNNGTGG 2 cut(s) 356, 391
CviAII CATG 6 cut(s) 147, 157, 274, 693, 913, 984
CviQI GTAC 2 cut(s) 334, 1067
DdeI CTNAG 4 cut(s) 72, 133, 191, 636
DpnI GATC 3 cut(s) 92, 161, 612
DpnII GATC 3 cut(s) 90, 159, 610
DraI TTTAAA 1 cut(s) 1135
DraIII CACNNNGTG 2 cut(s) 304, 530
EaeI YGGCCR 1 cut(s) 651
Eam1104I CTCTTC 1 cut(s) 1049
EarI CTCTTC 1 cut(s) 1049
Eco130I CCWWGG 1 cut(s) 1003
Eco32I GATATC 3 cut(s) 19, 436, 1157
Eco47I GGWCC 4 cut(s) 153, 987, 1007, 1016
Eco81I CCTNAGG 1 cut(s) 72
Eco91I GGTNACC 1 cut(s) 247
EcoNI CCTNNNNNAGG 1 cut(s) 806
EcoO109I RGGNCCY 1 cut(s) 1038
EcoO65I GGTNACC 1 cut(s) 247
EcoRII CCWGG 3 cut(s) 648, 801, 1034
EcoRV GATATC 3 cut(s) 19, 436, 1157
EcoT14I CCWWGG 1 cut(s) 1003
ErhI CCWWGG 1 cut(s) 1003
FaeI CATG 6 cut(s) 150, 160, 277, 696, 916, 987
FalI AAGNNNNNCTT 2 cut(s) 800, 832
FaqI GGGAC 1 cut(s) 634
FatI CATG 6 cut(s) 146, 156, 273, 692, 912, 983
FbaI TGATCA 1 cut(s) 159
FblI GTMKAC 1 cut(s) 285
Fnu4HI GCNGC 2 cut(s) 60, 104
FokI GGATG 2 cut(s) 443, 700
Fsp4HI GCNGC 2 cut(s) 60, 104
FspBI CTAG 1 cut(s) 1112
GlaI GCGC 1 cut(s) 712
GluI GCNGC 2 cut(s) 60, 104
GsaI CCCAGC 1 cut(s) 476
HaeIII GGCC 3 cut(s) 653, 748, 1040
HapII CCGG 2 cut(s) 319, 657
HgaI GACGC 1 cut(s) 717
HhaI GCGC 1 cut(s) 713
Hin1II CATG 6 cut(s) 150, 160, 277, 696, 916, 987
Hin6I GCGC 1 cut(s) 711
HinP1I GCGC 1 cut(s) 711
HindIII AAGCTT 1 cut(s) 172
HinfI GANTC 4 cut(s) 347, 935, 980, 1220
HpaII CCGG 2 cut(s) 319, 657
HphI GGTGA 4 cut(s) 206, 259, 967, 1073
Hpy166II GTNNAC 4 cut(s) 214, 286, 298, 1010
Hpy188I TCNGA 2 cut(s) 182, 886
Hpy188III TCNNGA 5 cut(s) 74, 913, 944, 1019, 1152
Hpy8I GTNNAC 4 cut(s) 214, 286, 298, 1010
Hpy99I CGWCG 2 cut(s) 293, 332
HpyAV CCTTC 2 cut(s) 265, 506
HpyCH4III ACNGT 6 cut(s) 121, 202, 271, 375, 443, 1131
HpyCH4IV ACGT 2 cut(s) 210, 616
HpyCH4V TGCA 7 cut(s) 34, 129, 141, 307, 759, 1167, 1217
HpyF10VI GCNNNNNNNGC 2 cut(s) 666, 719
HpyF3I CTNAG 4 cut(s) 72, 133, 191, 636
HpySE526I ACGT 2 cut(s) 210, 616
Hsp92II CATG 6 cut(s) 150, 160, 277, 696, 916, 987
HspAI GCGC 1 cut(s) 711
Ksp22I TGATCA 1 cut(s) 159
Kzo9I GATC 3 cut(s) 90, 159, 610
LmnI GCTCC 1 cut(s) 666
Lsp1109I GCAGC 2 cut(s) 71, 90
LweI GCATC 3 cut(s) 529, 553, 722
MaeI CTAG 1 cut(s) 1112
MaeII ACGT 2 cut(s) 210, 616
MaeIII GTNAC 6 cut(s) 247, 449, 486, 520, 533, 598
MalI GATC 3 cut(s) 92, 161, 612
MboI GATC 3 cut(s) 90, 159, 610
MboII GAAGA 6 cut(s) 380, 731, 808, 850, 944, 1066
MfeI CAATTG 1 cut(s) 354
MflI RGATCY 1 cut(s) 90
MlsI TGGCCA 1 cut(s) 653
MluCI AATT 4 cut(s) 38, 44, 96, 354
MluNI TGGCCA 1 cut(s) 653
MlyI GAGTC 2 cut(s) 989, 1229
Mox20I TGGCCA 1 cut(s) 653
MscI TGGCCA 1 cut(s) 653
MseI TTAA 3 cut(s) 111, 729, 1134
MslI CAYNNNNRTG 2 cut(s) 134, 390
Msp20I TGGCCA 1 cut(s) 653
MspI CCGG 2 cut(s) 319, 657
MspR9I CCNGG 4 cut(s) 320, 650, 803, 1036
MunI CAATTG 1 cut(s) 354
Mva1269I GAATGC 1 cut(s) 36
MvaI CCWGG 3 cut(s) 650, 803, 1036
MvnI CGCG 1 cut(s) 711
MwoI GCNNNNNNNGC 2 cut(s) 666, 719
NciI CCSGG 1 cut(s) 320
NdeII GATC 3 cut(s) 90, 159, 610
NlaIII CATG 6 cut(s) 150, 160, 277, 696, 916, 987
NlaIV GGNNCC 1 cut(s) 470
NmeAIII GCCGAG 1 cut(s) 240
NmuCI GTSAC 2 cut(s) 247, 598
NspI RCATGY 1 cut(s) 696
OliI CACNNNNGTG 1 cut(s) 134
PagI TCATGA 1 cut(s) 912
PasI CCCWGGG 1 cut(s) 1035
PciI ACATGT 1 cut(s) 692
PctI GAATGC 1 cut(s) 36
PfeI GAWTC 2 cut(s) 347, 935
PkrI GCNGC 2 cut(s) 61, 105
PleI GAGTC 2 cut(s) 988, 1228
PpsI GAGTC 2 cut(s) 988, 1228
PscI ACATGT 1 cut(s) 692
PsiI TTATAA 1 cut(s) 1182
Psp6I CCWGG 3 cut(s) 648, 801, 1034
PspEI GGTNACC 1 cut(s) 247
PspFI CCCAGC 1 cut(s) 472
PspGI CCWGG 3 cut(s) 648, 801, 1034
PspN4I GGNNCC 1 cut(s) 470
PspPI GGNCC 5 cut(s) 153, 987, 1007, 1016, 1038
PsuI RGATCY 1 cut(s) 90
RsaI GTAC 2 cut(s) 335, 1068
RsaNI GTAC 2 cut(s) 334, 1067
RseI CAYNNNNRTG 2 cut(s) 134, 390
SaqAI TTAA 3 cut(s) 111, 729, 1134
SatI GCNGC 2 cut(s) 60, 104
Sau3AI GATC 3 cut(s) 90, 159, 610
Sau96I GGNCC 5 cut(s) 153, 987, 1007, 1016, 1038
ScaI AGTACT 1 cut(s) 1068
SchI GAGTC 2 cut(s) 989, 1229
ScrFI CCNGG 4 cut(s) 320, 650, 803, 1036
SfaNI GCATC 3 cut(s) 529, 553, 722
SinI GGWCC 4 cut(s) 153, 987, 1007, 1016
SmiMI CAYNNNNRTG 2 cut(s) 134, 390
SmlI CTYRAG 1 cut(s) 944
SmoI CTYRAG 1 cut(s) 944
Sse9I AATT 4 cut(s) 38, 44, 96, 354
SsiI CCGC 1 cut(s) 428
SspI AATATT 1 cut(s) 1163
SspMI CTAG 1 cut(s) 1112
StyD4I CCNGG 4 cut(s) 318, 648, 801, 1034
StyI CCWWGG 1 cut(s) 1003
TaaI ACNGT 6 cut(s) 121, 202, 271, 375, 443, 1131
TaiI ACGT 2 cut(s) 213, 619
TaqI TCGA 4 cut(s) 204, 327, 361, 545
TasI AATT 4 cut(s) 38, 44, 96, 354
TatI WGTACW 1 cut(s) 1066
TfiI GAWTC 2 cut(s) 347, 935
Tru1I TTAA 3 cut(s) 111, 729, 1134
Tru9I TTAA 3 cut(s) 111, 729, 1134
TscAI CASTG 4 cut(s) 141, 724, 749, 1087
TseFI GTSAC 2 cut(s) 247, 598
TseI GCWGC 2 cut(s) 59, 103
Tsp45I GTSAC 2 cut(s) 247, 598
TspDTI ATGAA 2 cut(s) 901, 974
TspGWI ACGGA 1 cut(s) 809
TspRI CASTG 4 cut(s) 141, 724, 749, 1087
VpaK11BI GGWCC 4 cut(s) 153, 987, 1007, 1016
XagI CCTNNNNNAGG 1 cut(s) 806
XapI RAATTY 1 cut(s) 44
XceI RCATGY 1 cut(s) 696
XcmI CCANNNNNNNNNTGG 1 cut(s) 233
XmiI GTMKAC 1 cut(s) 285
XspI CTAG 1 cut(s) 1112
ZrmI AGTACT 1 cut(s) 1068
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.