RLG00000028499

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0000068
Physical Location & Seq
Reverse (-)
23528854 .. 23539728
10875 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000028499

Sequence Viewer

Length: 1593 bp
ATGACAAACTTGTCCCGGTTTGCAACCGCCGTTCAGGTTTACTCCTTAGCCAGGGGATCCTGGAAGAGTCTTAGTGCTTCGGTTATATCTGTGGATTTGGAGGGTGGTTCCGAACGTCCTGCTTTTGTTAATGGTAATTTCCATACGCTTGAAGCCCGTTTAAGTGTGTATTACAATGACCATTACGAGGAGCACCATAAGTGTGGCGGAGACTTGTTCATTGGCACCTTCAATCTGGCAACTGAAGAATTTGGCGAGATAATGAGACCGGAAGCTTTGCGAGAAGACAGATGCTCTATATCAAGATATGGGGACTCTCTTGCTTTGATTAAGCATTATGATTATGATTTCAGAGATCTAGTTAATCGCGGTTGTGACATTTGGGTTATGAAACAATATGGTGTTGCAGAGTCGTGGACTTATTTGTTCAATATATCTGTGGTTCAGAAAGGCTTCGAGGAAGAAGAACTGTTCAACGTCGCCTCGTCCAACTCCGGACACTGCCATAGCTCCGGTGCCGGTGGTCGATCTCATGTCAGATTTCGGCGAGTCCAACTCGAAGCTTTGGAAAATGCAAAACCCGCCAGAGCTGCTATACGCTTTCGTGTCCCTGAATTCGGCGAGTACTCCAACCTTTCAAATCCATTCCCTTTCTTCACGTACAAAAAGAAACGTCGGGATCTGCGTGTTTTCGGTACCTGTAACGGGCTCGTATGCCTTGAGAGTTTTGACCCCTGCACCGGGGATTGTTCTCCCGCTTTAATCTGGAATCCTTCTATCCGAAAGATTGTGATGTTGCCTACACCACCTGCTTGTCTTACCTCTACCGAATACCACAATTACCGAAAGTACACATCCCATGGCTTTGGCTATGATTCACATTCTAACGACTATAAGGTTTTACGAGTTGTGAGTCTTTCTGATGATCATTCAGACTTGTCCCGATTCACCACCGTGGTTCAGGTTTACTCCTTGGCCAAGGGCTCCTGGAAGAGACTTGGTGCTTCTGTTGTTCCGGTAGATTTGCAGGCCGGTGGTTCGGAACGTCCTGATTTTGTTAATGGCTGTTTGCATATGCTTGAAGTACGTTTAAGTGTGTATTACGATGACGATCACCAGGAACACCGTAAGTGTGGTGGAGACTCGTTTATTGCCTACTTTAATCTGGCCACTGAGGTATTTGGCGAGATAATGATACCGGAAGCTTTGCGAAAAGATGAGTGCTCTATTTCAAGATATGGGGAGTCCCTTGCCCTGATTAAGAATAAAAGTTATAATTTGGATGATCCAGCTAATTGTGGTTGTGACATTTGGGTTATGAAAGAGTATGGTGTAGCAGAGTCATGGACTTTTTTGTACGGTTTAGTTATGGTTCAAGCTACTATATTTGGTTTTAAAAGGTGTGGGGAAGTTGTGCTAGAGGAGACGAATGTCTTAAGACTAAGAAGAATGCTTTCGCTGGATCCTAAAAGCGGACAAGTTAAAGTTTTTGGAACCGAGTATTGTACTTACTATTTCATGGATTCTTTTGTAGAGAGTATCGTCTTGCTTGATCACGCGAAAGCCATATCTTACCAAGGAGAAATAAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

531

Amino Acids

60.08

Weight (kDa)

6.0

Isoelectric Point (pI)

41.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FBA_1 PF07734 9 - 146 5.1e-08 F-box associated beta propeller domain
FBA_3 PF08268 228 - 497 2.4e-15 F-box associated beta propeller domain
FBA_1 PF07734 231 - 475 5e-16 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1275
AarI CACCTGC 1 cut(s) 817
AasI GACNNNNNNGTC 1 cut(s) 10
Acc36I ACCTGC 1 cut(s) 817
Acc65I GGTACC 1 cut(s) 695
AccB1I GGYRCC 3 cut(s) 224, 515, 695
AccII CGCG 2 cut(s) 369, 1559
AccIII TCCGGA 1 cut(s) 494
AciI CCGC 6 cut(s) 27, 207, 369, 582, 756, 1473
AclWI GGATC 6 cut(s) 51, 64, 687, 1280, 1457, 1470
AcoI YGGCCR 2 cut(s) 975, 1167
AcsI RAATTY 2 cut(s) 248, 614
AcuI CTGAAG 1 cut(s) 264
AfaI GTAC 7 cut(s) 626, 662, 697, 851, 1086, 1358, 1507
AfiI CCNNNNNNNGG 7 cut(s) 51, 187, 617, 705, 740, 741, 1472
AflII CTTAAG 1 cut(s) 1435
AgsI TTSAA 8 cut(s) 152, 232, 430, 475, 639, 1082, 1233, 1376
AjnI CCWGG 4 cut(s) 50, 59, 986, 1116
AleI CACNNNNGTG 1 cut(s) 953
AluBI AGCT 7 cut(s) 275, 510, 563, 590, 1205, 1292, 1379
AluI AGCT 7 cut(s) 275, 510, 563, 590, 1205, 1292, 1379
Alw21I GWGCWC 2 cut(s) 195, 1226
Alw26I GTCTC 5 cut(s) 204, 259, 988, 1134, 1418
AlwI GGATC 6 cut(s) 51, 64, 687, 1280, 1457, 1470
Aor13HI TCCGGA 1 cut(s) 494
AoxI GGCC 3 cut(s) 975, 1029, 1167
ApeKI GCWGC 1 cut(s) 590
ApoI RAATTY 2 cut(s) 248, 614
Asp700I GAANNNNTTC 2 cut(s) 452, 1453
Asp718I GGTACC 1 cut(s) 695
AsuC2I CCSGG 2 cut(s) 16, 742
AsuHPI GGTGA 2 cut(s) 940, 1106
BalI TGGCCA 2 cut(s) 977, 1169
BamHI GGATCC 2 cut(s) 56, 1462
BanI GGYRCC 3 cut(s) 224, 515, 695
BanII GRGCYC 2 cut(s) 711, 986
BbsI GAAGAC 1 cut(s) 291
Bbv12I GWGCWC 2 cut(s) 195, 1226
BbvI GCAGC 1 cut(s) 577
BceAI ACGGC 1 cut(s) 14
BcgI CGANNNNNNTGC 2 cut(s) 101, 135
BciT130I CCWGG 4 cut(s) 52, 61, 988, 1118
BclI TGATCA 2 cut(s) 925, 1552
BcnI CCSGG 2 cut(s) 16, 742
BcoDI GTCTC 5 cut(s) 204, 259, 988, 1134, 1418
BfaI CTAG 2 cut(s) 359, 1418
BfrI CTTAAG 1 cut(s) 1435
BfuAI ACCTGC 1 cut(s) 817
BglII AGATCT 1 cut(s) 355
BisI GCNGC 1 cut(s) 591
BlsI GCNGC 1 cut(s) 592
BmcAI AGTACT 1 cut(s) 626
Bme1390I CCNGG 6 cut(s) 16, 52, 61, 742, 988, 1118
BmiI GGNNCC 8 cut(s) 58, 109, 226, 517, 697, 985, 1464, 1495
BmrFI CCNGG 6 cut(s) 16, 52, 61, 742, 988, 1118
BmsI GCATC 1 cut(s) 281
BoxI GACNNNNGTC 1 cut(s) 1430
BpiI GAAGAC 1 cut(s) 291
BplI GAGNNNNNCTC 2 cut(s) 540, 572
Bpu10I CCTNAGC 1 cut(s) 46
BpuEI CTTGAG 1 cut(s) 740
BpuMI CCSGG 2 cut(s) 16, 742
BsaAI YACGTR 1 cut(s) 660
BsaBI GATNNNNATC 1 cut(s) 1110
BsaI GGTCTC 1 cut(s) 259
BsaJI CCNNGG 7 cut(s) 51, 741, 859, 954, 972, 978, 1576
BsaWI WCCGGW 5 cut(s) 268, 494, 512, 1015, 1198
Bsc4I CCNNNNNNNGG 7 cut(s) 51, 187, 617, 705, 740, 741, 1472
Bse118I RCCGGY 2 cut(s) 518, 1031
Bse8I GATNNNNATC 1 cut(s) 1110
BseAI TCCGGA 1 cut(s) 494
BseBI CCWGG 4 cut(s) 52, 61, 988, 1118
BseDI CCNNGG 7 cut(s) 51, 741, 859, 954, 972, 978, 1576
BseGI GGATG 2 cut(s) 854, 1288
BseJI GATNNNNATC 1 cut(s) 1110
BseLI CCNNNNNNNGG 7 cut(s) 51, 187, 617, 705, 740, 741, 1472
BseMII CTCAG 1 cut(s) 1164
BseRI GAGGAG 2 cut(s) 203, 1436
BseXI GCAGC 1 cut(s) 577
BsgI GTGCAG 1 cut(s) 721
Bsh1236I CGCG 2 cut(s) 369, 1559
BshFI GGCC 3 cut(s) 977, 1031, 1169
BshNI GGYRCC 3 cut(s) 224, 515, 695
BsiHKAI GWGCWC 2 cut(s) 195, 1226
BsiSI CCGG 9 cut(s) 16, 269, 495, 513, 519, 741, 1016, 1032, 1199
BslFI GGGAC 4 cut(s) 326, 593, 925, 1231
BslI CCNNNNNNNGG 7 cut(s) 51, 187, 617, 705, 740, 741, 1472
BsmAI GTCTC 5 cut(s) 204, 259, 988, 1134, 1418
BsmBI CGTCTC 1 cut(s) 1418
BsmFI GGGAC 4 cut(s) 326, 593, 925, 1231
BsmI GAATGC 1 cut(s) 1455
BsnI GGCC 3 cut(s) 977, 1031, 1169
Bso31I GGTCTC 1 cut(s) 259
Bsp1286I GDGCHC 4 cut(s) 195, 711, 986, 1226
Bsp13I TCCGGA 1 cut(s) 494
Bsp143I GATC 9 cut(s) 56, 355, 527, 679, 925, 1111, 1285, 1462, 1552
Bsp19I CCATGG 1 cut(s) 859
BspACI CCGC 6 cut(s) 27, 207, 369, 582, 756, 1473
BspANI GGCC 3 cut(s) 977, 1031, 1169
BspCNI CTCAG 1 cut(s) 1165
BspEI TCCGGA 1 cut(s) 494
BspFNI CGCG 2 cut(s) 369, 1559
BspLI GGNNCC 8 cut(s) 58, 109, 226, 517, 697, 985, 1464, 1495
BspMI ACCTGC 1 cut(s) 817
BspPI GGATC 6 cut(s) 51, 64, 687, 1280, 1457, 1470
BspT107I GGYRCC 3 cut(s) 224, 515, 695
BspTI CTTAAG 1 cut(s) 1435
BspTNI GGTCTC 1 cut(s) 259
BsrFI RCCGGY 2 cut(s) 518, 1031
BssAI RCCGGY 2 cut(s) 518, 1031
BssECI CCNNGG 7 cut(s) 51, 741, 859, 954, 972, 978, 1576
BssMI GATC 9 cut(s) 56, 355, 527, 679, 925, 1111, 1285, 1462, 1552
BssT1I CCWWGG 4 cut(s) 859, 972, 978, 1576
Bst2UI CCWGG 4 cut(s) 52, 61, 988, 1118
Bst4CI ACNGT 4 cut(s) 471, 955, 1127, 1361
Bst6I CTCTTC 2 cut(s) 59, 986
BstAFI CTTAAG 1 cut(s) 1435
BstBAI YACGTR 1 cut(s) 660
BstC8I GCNNGC 1 cut(s) 1029
BstDEI CTNAG 4 cut(s) 46, 71, 1173, 1442
BstDSI CCRYGG 2 cut(s) 859, 954
BstENI CCTNNNNNAGG 1 cut(s) 49
BstF5I GGATG 2 cut(s) 854, 1288
BstFNI CGCG 2 cut(s) 369, 1559
BstKTI GATC 9 cut(s) 59, 358, 530, 682, 928, 1114, 1288, 1465, 1555
BstMAI GTCTC 5 cut(s) 204, 259, 988, 1134, 1418
BstMBI GATC 9 cut(s) 56, 355, 527, 679, 925, 1111, 1285, 1462, 1552
BstMWI GCNNNNNNNGC 2 cut(s) 581, 590
BstNI CCWGG 4 cut(s) 52, 61, 988, 1118
BstPAI GACNNNNGTC 1 cut(s) 1430
BstSCI CCNGG 6 cut(s) 14, 50, 59, 740, 986, 1116
BstUI CGCG 2 cut(s) 369, 1559
BstV1I GCAGC 1 cut(s) 577
BstV2I GAAGAC 1 cut(s) 291
BstX2I RGATCY 4 cut(s) 56, 355, 679, 1462
BstXI CCANNNNNNTGG 2 cut(s) 203, 866
BstYI RGATCY 4 cut(s) 56, 355, 679, 1462
BsuRI GGCC 3 cut(s) 977, 1031, 1169
BtgI CCRYGG 2 cut(s) 859, 954
BtsCI GGATG 2 cut(s) 854, 1288
BtsI GCAGTG 1 cut(s) 499
BtsIMutI CAGTG 2 cut(s) 499, 1170
BveI ACCTGC 1 cut(s) 817
Cac8I GCNNGC 1 cut(s) 1029
Cfr10I RCCGGY 2 cut(s) 518, 1031
Csp6I GTAC 7 cut(s) 625, 661, 696, 850, 1085, 1357, 1506
CviAII CATG 4 cut(s) 533, 860, 1344, 1519
CviQI GTAC 7 cut(s) 625, 661, 696, 850, 1085, 1357, 1506
DdeI CTNAG 4 cut(s) 46, 71, 1173, 1442
DpnI GATC 9 cut(s) 58, 357, 529, 681, 927, 1113, 1287, 1464, 1554
DpnII GATC 9 cut(s) 56, 355, 527, 679, 925, 1111, 1285, 1462, 1552
DraI TTTAAA 1 cut(s) 1396
DrdI GACNNNNNNGTC 1 cut(s) 10
DseDI GACNNNNNNGTC 1 cut(s) 10
EaeI YGGCCR 2 cut(s) 975, 1167
Eam1104I CTCTTC 2 cut(s) 59, 986
EarI CTCTTC 2 cut(s) 59, 986
EciI GGCGGA 1 cut(s) 222
Eco130I CCWWGG 4 cut(s) 859, 972, 978, 1576
Eco24I GRGCYC 2 cut(s) 711, 986
Eco31I GGTCTC 1 cut(s) 259
Eco57I CTGAAG 1 cut(s) 264
EcoNI CCTNNNNNAGG 1 cut(s) 49
EcoRI GAATTC 1 cut(s) 614
EcoRII CCWGG 4 cut(s) 50, 59, 986, 1116
EcoT14I CCWWGG 4 cut(s) 859, 972, 978, 1576
EcoT38I GRGCYC 2 cut(s) 711, 986
ErhI CCWWGG 4 cut(s) 859, 972, 978, 1576
Esp3I CGTCTC 1 cut(s) 1418
FaeI CATG 4 cut(s) 536, 863, 1347, 1522
FaqI GGGAC 4 cut(s) 326, 593, 925, 1231
FatI CATG 4 cut(s) 532, 859, 1343, 1518
FauI CCCGC 2 cut(s) 589, 763
FauNDI CATATG 1 cut(s) 1074
FbaI TGATCA 2 cut(s) 925, 1552
Fnu4HI GCNGC 1 cut(s) 591
FokI GGATG 2 cut(s) 841, 1295
FriOI GRGCYC 2 cut(s) 711, 986
Fsp4HI GCNGC 1 cut(s) 591
FspBI CTAG 2 cut(s) 359, 1418
GluI GCNGC 1 cut(s) 591
HaeIII GGCC 3 cut(s) 977, 1031, 1169
HapII CCGG 9 cut(s) 16, 269, 495, 513, 519, 741, 1016, 1032, 1199
Hin1II CATG 4 cut(s) 536, 863, 1347, 1522
HindIII AAGCTT 3 cut(s) 273, 561, 1203
HpaII CCGG 9 cut(s) 16, 269, 495, 513, 519, 741, 1016, 1032, 1199
HphI GGTGA 2 cut(s) 940, 1106
Hpy166II GTNNAC 4 cut(s) 40, 417, 852, 967
Hpy188I TCNGA 8 cut(s) 112, 353, 447, 539, 782, 922, 934, 1042
Hpy188III TCNNGA 7 cut(s) 303, 495, 677, 766, 942, 1049, 1233
Hpy8I GTNNAC 4 cut(s) 40, 417, 852, 967
Hpy99I CGWCG 2 cut(s) 482, 678
HpyAV CCTTC 2 cut(s) 238, 783
HpyCH4III ACNGT 4 cut(s) 471, 955, 1127, 1361
HpyCH4IV ACGT 6 cut(s) 115, 477, 659, 673, 1045, 1087
HpyCH4V TGCA 6 cut(s) 23, 407, 575, 738, 1027, 1072
HpyF10VI GCNNNNNNNGC 2 cut(s) 581, 590
HpyF3I CTNAG 4 cut(s) 46, 71, 1173, 1442
HpySE526I ACGT 6 cut(s) 115, 477, 659, 673, 1045, 1087
Hsp92II CATG 4 cut(s) 536, 863, 1347, 1522
Kpn2I TCCGGA 1 cut(s) 494
KpnI GGTACC 1 cut(s) 699
Ksp22I TGATCA 2 cut(s) 925, 1552
Kzo9I GATC 9 cut(s) 56, 355, 527, 679, 925, 1111, 1285, 1462, 1552
LmnI GCTCC 3 cut(s) 190, 515, 989
Lsp1109I GCAGC 1 cut(s) 577
LweI GCATC 1 cut(s) 281
MaeI CTAG 2 cut(s) 359, 1418
MaeII ACGT 6 cut(s) 115, 477, 659, 673, 1045, 1087
MaeIII GTNAC 3 cut(s) 374, 701, 1304
MalI GATC 9 cut(s) 58, 357, 529, 681, 927, 1113, 1287, 1464, 1554
MboI GATC 9 cut(s) 56, 355, 527, 679, 925, 1111, 1285, 1462, 1552
MboII GAAGA 8 cut(s) 76, 257, 296, 473, 476, 646, 1003, 1458
MflI RGATCY 4 cut(s) 56, 355, 679, 1462
MhlI GDGCHC 4 cut(s) 195, 711, 986, 1226
MlsI TGGCCA 2 cut(s) 977, 1169
MluCI AATT 6 cut(s) 136, 248, 614, 838, 1276, 1294
MluNI TGGCCA 2 cut(s) 977, 1169
MlyI GAGTC 8 cut(s) 76, 308, 419, 558, 922, 1136, 1253, 1349
MmeI TCCRAC 3 cut(s) 513, 577, 654
MnlI CCTC 7 cut(s) 94, 181, 451, 493, 832, 1168, 1414
Mox20I TGGCCA 2 cut(s) 977, 1169
MroI TCCGGA 1 cut(s) 494
MroXI GAANNNNTTC 2 cut(s) 452, 1453
MscI TGGCCA 2 cut(s) 977, 1169
MslI CAYNNNNRTG 2 cut(s) 201, 953
Msp20I TGGCCA 2 cut(s) 977, 1169
MspCI CTTAAG 1 cut(s) 1435
MspI CCGG 9 cut(s) 16, 269, 495, 513, 519, 741, 1016, 1032, 1199
MspR9I CCNGG 6 cut(s) 16, 52, 61, 742, 988, 1118
Mva1269I GAATGC 1 cut(s) 1455
MvaI CCWGG 4 cut(s) 52, 61, 988, 1118
MvnI CGCG 2 cut(s) 369, 1559
MwoI GCNNNNNNNGC 2 cut(s) 581, 590
NciI CCSGG 2 cut(s) 16, 742
NcoI CCATGG 1 cut(s) 859
NdeI CATATG 1 cut(s) 1074
NdeII GATC 9 cut(s) 56, 355, 527, 679, 925, 1111, 1285, 1462, 1552
NlaIII CATG 4 cut(s) 536, 863, 1347, 1522
NlaIV GGNNCC 8 cut(s) 58, 109, 226, 517, 697, 985, 1464, 1495
NmuCI GTSAC 2 cut(s) 374, 1304
OliI CACNNNNGTG 1 cut(s) 953
PaqCI CACCTGC 1 cut(s) 817
PcsI WCGNNNNNNNCGW 1 cut(s) 682
PctI GAATGC 1 cut(s) 1455
PdmI GAANNNNTTC 2 cut(s) 452, 1453
PfeI GAWTC 4 cut(s) 769, 875, 945, 1523
PfoI TCCNGGA 2 cut(s) 59, 986
PkrI GCNGC 1 cut(s) 592
PleI GAGTC 8 cut(s) 75, 308, 418, 557, 921, 1136, 1252, 1348
PpsI GAGTC 8 cut(s) 75, 308, 418, 557, 921, 1136, 1252, 1348
Ppu21I YACGTR 1 cut(s) 660
PshAI GACNNNNGTC 1 cut(s) 1430
PsiI TTATAA 1 cut(s) 1275
Psp6I CCWGG 4 cut(s) 50, 59, 986, 1116
PspGI CCWGG 4 cut(s) 50, 59, 986, 1116
PspN4I GGNNCC 8 cut(s) 58, 109, 226, 517, 697, 985, 1464, 1495
PsuI RGATCY 4 cut(s) 56, 355, 679, 1462
RsaI GTAC 7 cut(s) 626, 662, 697, 851, 1086, 1358, 1507
RsaNI GTAC 7 cut(s) 625, 661, 696, 850, 1085, 1357, 1506
RseI CAYNNNNRTG 2 cut(s) 201, 953
SatI GCNGC 1 cut(s) 591
Sau3AI GATC 9 cut(s) 56, 355, 527, 679, 925, 1111, 1285, 1462, 1552
ScaI AGTACT 1 cut(s) 626
SchI GAGTC 8 cut(s) 76, 308, 419, 558, 922, 1136, 1253, 1349
ScrFI CCNGG 6 cut(s) 16, 52, 61, 742, 988, 1118
SduI GDGCHC 4 cut(s) 195, 711, 986, 1226
SfaNI GCATC 1 cut(s) 281
SmiMI CAYNNNNRTG 2 cut(s) 201, 953
SmlI CTYRAG 2 cut(s) 719, 1435
SmoI CTYRAG 2 cut(s) 719, 1435
Sse9I AATT 6 cut(s) 136, 248, 614, 838, 1276, 1294
SsiI CCGC 6 cut(s) 27, 207, 369, 582, 756, 1473
SspMI CTAG 2 cut(s) 359, 1418
StyD4I CCNGG 6 cut(s) 14, 50, 59, 740, 986, 1116
StyI CCWWGG 4 cut(s) 859, 972, 978, 1576
TaaI ACNGT 4 cut(s) 471, 955, 1127, 1361
TaiI ACGT 6 cut(s) 118, 480, 662, 676, 1048, 1090
TaqI TCGA 3 cut(s) 456, 526, 558
TasI AATT 6 cut(s) 136, 248, 614, 838, 1276, 1294
TatI WGTACW 3 cut(s) 624, 849, 1505
TfiI GAWTC 4 cut(s) 769, 875, 945, 1523
TscAI CASTG 2 cut(s) 506, 1177
TseFI GTSAC 2 cut(s) 374, 1304
TseI GCWGC 1 cut(s) 590
Tsp45I GTSAC 2 cut(s) 374, 1304
TspDTI ATGAA 4 cut(s) 208, 404, 1334, 1507
TspRI CASTG 2 cut(s) 506, 1177
Vha464I CTTAAG 1 cut(s) 1435
XagI CCTNNNNNAGG 1 cut(s) 49
XapI RAATTY 2 cut(s) 248, 614
XmnI GAANNNNTTC 2 cut(s) 452, 1453
XspI CTAG 2 cut(s) 359, 1418
ZrmI AGTACT 1 cut(s) 626
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.