RchiOBHm_Chr5g0075091

F-box kelch-repeat protein At3g23880-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000068
Physical Location & Seq
Forward (+)
80943753 .. 80946211
2459 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ34984

Sequence Viewer

Length: 1233 bp
ATGTCAGATTATCTTCCTCAGGAAGTCATAACCAATATCTTACTTAGACTACCCGCTAAATCTTTGGTCATATGCACCTCAGTCTGCAAGTCATGGGGGTCTATGATTAAAAACTCGAGCTTTATTCAAGCCCATCTCACAATCAACTTCAATAACCTCCATGGCACTCACCGCCTACTACTCCACGGGGTTTCTTGTAGAAGTTATAGCAGCGGCTTTGGCCACTACCAGTCCATCCACGGGCTGGTAGAAGAGGTTTACTCTTTGCATTATGATAACCATGTTTTTGATGAGTACTGCAAGTTAGGATTTCAATCTCCAGTTGCTGATGGGAAAATCTATAATGAGTGTTTCCGTGTGGTCGGCATTTGTAATGGGCTGGTATTTCTTGCAGATGATTTAATGCGTCTGGGTTACAACTTCATAATATGGAATCCGTCTATAAGAAAGTTGGTAACCCTTCCCAAGCCTGGCCTTAGATTTCAGACTGTTGGTGGGTATAATGCTTGTCATGGGTTTGCATTTGATGCTATTACCAATGACTATAAGGTTGTGAGGCTTGTCGAGGATCAAAGGGGGTGTATGGTGGATAGTGAGGATACTGCGAATCAAACATTTGTGGAGGTTTATTCATTAGCTGCAGGCTCATGGAGTGACCCTAGGTTTGTTGATCCCCAATGTAAATTAAATATAGGCTCACCCCAGGCTTTTGTTAATGGGGCTCTTCATTGGGATGCATGCAATTTGACAAGTAGCTCATGTCGCTATTTTATACTGGCATTTGATGTGAGTAGTGAGTTATTCCGGGAGATGATGATGCCAAAGAGTTTGGACTTGGATTTACGAAGAGTCTTGACATTGCAATTGTCTGTTTCAGGAGATGGAAAATCCCTTGCTCTGTTCATGACTAAAGAAGAAGGTTCTTTTCTTGATATATGGGTCATGACGGAGTATTCTGTGCAGGAGTCGTGGACCAAATTGATTACTCTTCGTCCACAAGGTCCAGTAGAGAGTTTACTCAGAGCATTATGTTTTAGGAAGAGTGGTGAAGTAGTGTTGGAAATATCTCATGGCCGGTATCGAGGAGAAAAGGCGAGAATTGAATTATATTCACTAGATCTTGCAAGTGGACAACTCAAGGCTCTTGGGATTTCTAGATATCATTATTACACCATGGATACTTACGAAGAGAGCATTGTCTTGCTTGACAGGAATGATGCAGTTTCTTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

410

Amino Acids

46.31

Weight (kDa)

6.07

Isoelectric Point (pI)

42.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 4 - 39 1.9e-07 F-box-like
F-box PF00646 5 - 41 7.4e-09 F-box domain
FBA_1 PF07734 115 - 333 6.1e-23 F-box associated beta propeller domain
FBA_3 PF08268 118 - 354 3.6e-18 F-box associated beta propeller domain
b-prop_At3g26010-like PF24750 120 - 286 3.2e-07 F-box protein At3g26010-like, beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 244
AciI CCGC 3 cut(s) 54, 172, 213
AclWI GGATC 2 cut(s) 576, 665
AcoI YGGCCR 2 cut(s) 220, 1072
AfaI GTAC 1 cut(s) 296
AfiI CCNNNNNNNGG 3 cut(s) 240, 244, 470
AgsI TTSAA 4 cut(s) 128, 151, 314, 1103
AjnI CCWGG 2 cut(s) 469, 702
AluBI AGCT 3 cut(s) 120, 638, 756
AluI AGCT 3 cut(s) 120, 638, 756
AlwI GGATC 2 cut(s) 576, 665
AlwNI CAGNNNCTG 1 cut(s) 326
Ama87I CYCGRG 1 cut(s) 115
AoxI GGCC 3 cut(s) 220, 472, 1072
ApeKI GCWGC 2 cut(s) 210, 638
ArsI GACNNNNNNTTYG 2 cut(s) 647, 679
AspA2I CCTAGG 1 cut(s) 659
AspS9I GGNCC 2 cut(s) 972, 1001
AsuC2I CCSGG 1 cut(s) 806
AsuHPI GGTGA 3 cut(s) 161, 690, 1058
AvaI CYCGRG 1 cut(s) 115
AvaII GGWCC 2 cut(s) 972, 1001
AvrII CCTAGG 1 cut(s) 659
AxyI CCTNAGG 1 cut(s) 18
BalI TGGCCA 1 cut(s) 222
BanII GRGCYC 1 cut(s) 724
BbvI GCAGC 2 cut(s) 222, 625
BccI CCATC 4 cut(s) 141, 242, 323, 875
BciT130I CCWGG 2 cut(s) 471, 704
BciVI GTATCC 2 cut(s) 592, 1171
BcnI CCSGG 1 cut(s) 806
BfaI CTAG 3 cut(s) 660, 1115, 1155
BfmI CTRYAG 1 cut(s) 639
BfuI GTATCC 2 cut(s) 592, 1171
BglII AGATCT 1 cut(s) 1117
BisI GCNGC 3 cut(s) 211, 214, 639
BlnI CCTAGG 1 cut(s) 659
BlsI GCNGC 3 cut(s) 212, 215, 640
BmcAI AGTACT 1 cut(s) 296
Bme1390I CCNGG 3 cut(s) 471, 704, 806
Bme18I GGWCC 2 cut(s) 972, 1001
BmeT110I CYCGRG 1 cut(s) 115
BmgT120I GGNCC 2 cut(s) 972, 1001
BmrFI CCNGG 3 cut(s) 471, 704, 806
BmsI GCATC 4 cut(s) 517, 724, 807, 1207
BplI GAGNNNNNCTC 2 cut(s) 245, 277
BpmI CTGGAG 1 cut(s) 303
BpuEI CTTGAG 1 cut(s) 1121
BpuMI CCSGG 1 cut(s) 806
BsaBI GATNNNNATC 1 cut(s) 313
BsaJI CCNNGG 6 cut(s) 160, 184, 238, 659, 702, 1173
Bsc4I CCNNNNNNNGG 3 cut(s) 240, 244, 470
Bse118I RCCGGY 1 cut(s) 1074
Bse1I ACTGG 4 cut(s) 229, 320, 780, 1004
Bse21I CCTNAGG 1 cut(s) 18
Bse3DI GCAATG 1 cut(s) 857
Bse8I GATNNNNATC 1 cut(s) 313
BseBI CCWGG 2 cut(s) 471, 704
BseDI CCNNGG 6 cut(s) 160, 184, 238, 659, 702, 1173
BseGI GGATG 2 cut(s) 234, 739
BseJI GATNNNNATC 1 cut(s) 313
BseLI CCNNNNNNNGG 3 cut(s) 240, 244, 470
BseMI GCAATG 1 cut(s) 857
BseMII CTCAG 3 cut(s) 32, 93, 1033
BseNI ACTGG 4 cut(s) 229, 320, 780, 1004
BseRI GAGGAG 1 cut(s) 1098
BseXI GCAGC 2 cut(s) 222, 625
BsgI GTGCAG 1 cut(s) 980
BshFI GGCC 3 cut(s) 222, 474, 1074
BsiHKCI CYCGRG 1 cut(s) 115
BsiSI CCGG 2 cut(s) 805, 1075
BslI CCNNNNNNNGG 3 cut(s) 240, 244, 470
BsnI GGCC 3 cut(s) 222, 474, 1074
BsoBI CYCGRG 1 cut(s) 115
Bsp1286I GDGCHC 1 cut(s) 724
Bsp143I GATC 3 cut(s) 568, 670, 1117
Bsp19I CCATGG 2 cut(s) 160, 1173
BspACI CCGC 3 cut(s) 54, 172, 213
BspANI GGCC 3 cut(s) 222, 474, 1074
BspCNI CTCAG 3 cut(s) 31, 92, 1032
BspHI TCATGA 2 cut(s) 903, 942
BspMAI CTGCAG 1 cut(s) 643
BspPI GGATC 2 cut(s) 576, 665
BspQI GCTCTTC 1 cut(s) 729
BsrDI GCAATG 1 cut(s) 857
BsrFI RCCGGY 1 cut(s) 1074
BsrI ACTGG 4 cut(s) 229, 320, 780, 1004
BssAI RCCGGY 1 cut(s) 1074
BssECI CCNNGG 6 cut(s) 160, 184, 238, 659, 702, 1173
BssMI GATC 3 cut(s) 568, 670, 1117
BssT1I CCWWGG 3 cut(s) 160, 659, 1173
Bst2UI CCWGG 2 cut(s) 471, 704
Bst4CI ACNGT 1 cut(s) 490
Bst6I CTCTTC 6 cut(s) 246, 729, 841, 993, 1034, 1182
BstAPI GCANNNNNTGC 1 cut(s) 527
BstC8I GCNNGC 2 cut(s) 643, 739
BstDEI CTNAG 5 cut(s) 18, 44, 79, 476, 1019
BstDSI CCRYGG 4 cut(s) 160, 184, 238, 1173
BstEII GGTNACC 1 cut(s) 454
BstF5I GGATG 2 cut(s) 234, 739
BstKTI GATC 3 cut(s) 571, 673, 1120
BstMBI GATC 3 cut(s) 568, 670, 1117
BstMWI GCNNNNNNNGC 4 cut(s) 171, 219, 527, 762
BstNI CCWGG 2 cut(s) 471, 704
BstNSI RCATGY 1 cut(s) 741
BstPI GGTNACC 1 cut(s) 454
BstSCI CCNGG 3 cut(s) 469, 702, 804
BstSFI CTRYAG 1 cut(s) 639
BstV1I GCAGC 2 cut(s) 222, 625
BstX2I RGATCY 1 cut(s) 1117
BstYI RGATCY 1 cut(s) 1117
Bsu36I CCTNAGG 1 cut(s) 18
BsuI GTATCC 2 cut(s) 592, 1171
BsuRI GGCC 3 cut(s) 222, 474, 1074
BtgI CCRYGG 4 cut(s) 160, 184, 238, 1173
BtsCI GGATG 2 cut(s) 234, 739
Cac8I GCNNGC 2 cut(s) 643, 739
CaiI CAGNNNCTG 1 cut(s) 326
CciI TCATGA 2 cut(s) 903, 942
Cfr10I RCCGGY 1 cut(s) 1074
Cfr13I GGNCC 2 cut(s) 972, 1001
CseI GACGC 1 cut(s) 395
Csp6I GTAC 1 cut(s) 295
CviQI GTAC 1 cut(s) 295
DdeI CTNAG 5 cut(s) 18, 44, 79, 476, 1019
DpnI GATC 3 cut(s) 570, 672, 1119
DpnII GATC 3 cut(s) 568, 670, 1117
EaeI YGGCCR 2 cut(s) 220, 1072
Eam1104I CTCTTC 6 cut(s) 246, 729, 841, 993, 1034, 1182
EarI CTCTTC 6 cut(s) 246, 729, 841, 993, 1034, 1182
Eco130I CCWWGG 3 cut(s) 160, 659, 1173
Eco24I GRGCYC 1 cut(s) 724
Eco32I GATATC 1 cut(s) 1160
Eco47I GGWCC 2 cut(s) 972, 1001
Eco81I CCTNAGG 1 cut(s) 18
Eco88I CYCGRG 1 cut(s) 115
Eco91I GGTNACC 1 cut(s) 454
EcoO65I GGTNACC 1 cut(s) 454
EcoRII CCWGG 2 cut(s) 469, 702
EcoRV GATATC 1 cut(s) 1160
EcoT14I CCWWGG 3 cut(s) 160, 659, 1173
EcoT22I ATGCAT 1 cut(s) 739
EcoT38I GRGCYC 1 cut(s) 724
ErhI CCWWGG 3 cut(s) 160, 659, 1173
FauI CCCGC 1 cut(s) 61
FauNDI CATATG 1 cut(s) 71
Fnu4HI GCNGC 3 cut(s) 211, 214, 639
FokI GGATG 2 cut(s) 221, 746
FriOI GRGCYC 1 cut(s) 724
Fsp4HI GCNGC 3 cut(s) 211, 214, 639
FspBI CTAG 3 cut(s) 660, 1115, 1155
GluI GCNGC 3 cut(s) 211, 214, 639
GsuI CTGGAG 1 cut(s) 303
HaeIII GGCC 3 cut(s) 222, 474, 1074
HapII CCGG 2 cut(s) 805, 1075
HgaI GACGC 1 cut(s) 395
HinfI GANTC 4 cut(s) 433, 607, 849, 965
HpaII CCGG 2 cut(s) 805, 1075
HphI GGTGA 3 cut(s) 161, 690, 1058
Hpy166II GTNNAC 5 cut(s) 259, 972, 995, 1016, 1130
Hpy188I TCNGA 3 cut(s) 7, 486, 1022
Hpy188III TCNNGA 7 cut(s) 20, 853, 876, 904, 929, 943, 1155
Hpy8I GTNNAC 5 cut(s) 259, 972, 995, 1016, 1130
HpyAV CCTTC 2 cut(s) 470, 911
HpyCH4III ACNGT 1 cut(s) 490
HpyF10VI GCNNNNNNNGC 4 cut(s) 171, 219, 527, 762
HpyF3I CTNAG 5 cut(s) 18, 44, 79, 476, 1019
Kzo9I GATC 3 cut(s) 568, 670, 1117
LguI GCTCTTC 1 cut(s) 729
Lsp1109I GCAGC 2 cut(s) 222, 625
LweI GCATC 4 cut(s) 517, 724, 807, 1207
MaeI CTAG 3 cut(s) 660, 1115, 1155
MaeIII GTNAC 3 cut(s) 413, 454, 653
MalI GATC 3 cut(s) 570, 672, 1119
MboI GATC 3 cut(s) 568, 670, 1117
MboII GAAGA 8 cut(s) 5, 263, 716, 858, 926, 980, 1051, 1199
MfeI CAATTG 1 cut(s) 863
MflI RGATCY 1 cut(s) 1117
MhlI GDGCHC 1 cut(s) 724
MlsI TGGCCA 1 cut(s) 222
MluCI AATT 6 cut(s) 683, 742, 863, 977, 1098, 1103
MluNI TGGCCA 1 cut(s) 222
MlyI GAGTC 2 cut(s) 858, 974
MmeI TCCRAC 1 cut(s) 1038
MnlI CCTC 9 cut(s) 27, 88, 167, 247, 549, 559, 589, 616, 1076
Mox20I TGGCCA 1 cut(s) 222
Mph1103I ATGCAT 1 cut(s) 739
MscI TGGCCA 1 cut(s) 222
MseI TTAA 4 cut(s) 108, 401, 686, 714
MslI CAYNNNNRTG 1 cut(s) 732
Msp20I TGGCCA 1 cut(s) 222
MspA1I CMGCKG 1 cut(s) 213
MspI CCGG 2 cut(s) 805, 1075
MspR9I CCNGG 3 cut(s) 471, 704, 806
MunI CAATTG 1 cut(s) 863
MvaI CCWGG 2 cut(s) 471, 704
MwoI GCNNNNNNNGC 4 cut(s) 171, 219, 527, 762
NciI CCSGG 1 cut(s) 806
NcoI CCATGG 2 cut(s) 160, 1173
NdeI CATATG 1 cut(s) 71
NdeII GATC 3 cut(s) 568, 670, 1117
NmuCI GTSAC 1 cut(s) 653
NsiI ATGCAT 1 cut(s) 739
NspI RCATGY 1 cut(s) 741
PaeI GCATGC 1 cut(s) 741
PaeR7I CTCGAG 1 cut(s) 115
PagI TCATGA 2 cut(s) 903, 942
PciSI GCTCTTC 1 cut(s) 729
PfeI GAWTC 2 cut(s) 433, 607
PflMI CCANNNNNTGG 1 cut(s) 244
PfoI TCCNGGA 1 cut(s) 804
PkrI GCNGC 3 cut(s) 212, 215, 640
PleI GAGTC 2 cut(s) 857, 973
PpsI GAGTC 2 cut(s) 857, 973
Psp6I CCWGG 2 cut(s) 469, 702
PspEI GGTNACC 1 cut(s) 454
PspGI CCWGG 2 cut(s) 469, 702
PspPI GGNCC 2 cut(s) 972, 1001
PspXI VCTCGAGB 1 cut(s) 115
PstI CTGCAG 1 cut(s) 643
PstNI CAGNNNCTG 1 cut(s) 326
PsuI RGATCY 1 cut(s) 1117
RsaI GTAC 1 cut(s) 296
RsaNI GTAC 1 cut(s) 295
RseI CAYNNNNRTG 1 cut(s) 732
SapI GCTCTTC 1 cut(s) 729
SaqAI TTAA 4 cut(s) 108, 401, 686, 714
SatI GCNGC 3 cut(s) 211, 214, 639
Sau3AI GATC 3 cut(s) 568, 670, 1117
Sau96I GGNCC 2 cut(s) 972, 1001
ScaI AGTACT 1 cut(s) 296
SchI GAGTC 2 cut(s) 858, 974
ScrFI CCNGG 3 cut(s) 471, 704, 806
SduI GDGCHC 1 cut(s) 724
SfaNI GCATC 4 cut(s) 517, 724, 807, 1207
SfcI CTRYAG 1 cut(s) 639
Sfr274I CTCGAG 1 cut(s) 115
SinI GGWCC 2 cut(s) 972, 1001
SlaI CTCGAG 1 cut(s) 115
SmiMI CAYNNNNRTG 1 cut(s) 732
SmlI CTYRAG 2 cut(s) 115, 1136
SmoI CTYRAG 2 cut(s) 115, 1136
SphI GCATGC 1 cut(s) 741
Sse9I AATT 6 cut(s) 683, 742, 863, 977, 1098, 1103
SsiI CCGC 3 cut(s) 54, 172, 213
SspMI CTAG 3 cut(s) 660, 1115, 1155
StyD4I CCNGG 3 cut(s) 469, 702, 804
StyI CCWWGG 3 cut(s) 160, 659, 1173
TaaI ACNGT 1 cut(s) 490
TaqI TCGA 3 cut(s) 116, 564, 1081
TasI AATT 6 cut(s) 683, 742, 863, 977, 1098, 1103
TatI WGTACW 1 cut(s) 294
TauI GCSGC 1 cut(s) 216
TfiI GAWTC 2 cut(s) 433, 607
Tru1I TTAA 4 cut(s) 108, 401, 686, 714
Tru9I TTAA 4 cut(s) 108, 401, 686, 714
TseFI GTSAC 1 cut(s) 653
TseI GCWGC 2 cut(s) 210, 638
Tsp45I GTSAC 1 cut(s) 653
TspDTI ATGAA 4 cut(s) 412, 621, 716, 892
TspGWI ACGGA 3 cut(s) 344, 426, 962
Van91I CCANNNNNTGG 1 cut(s) 244
VpaK11BI GGWCC 2 cut(s) 972, 1001
XbaI TCTAGA 1 cut(s) 1154
XceI RCATGY 1 cut(s) 741
XcmI CCANNNNNNNNNTGG 1 cut(s) 241
XhoI CTCGAG 1 cut(s) 115
XmaJI CCTAGG 1 cut(s) 659
XspI CTAG 3 cut(s) 660, 1115, 1155
ZrmI AGTACT 1 cut(s) 296
Zsp2I ATGCAT 1 cut(s) 739
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.