Prupe.6G287700_v2.0.a1

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0000068
Physical Location & Seq
Reverse (-)
26596971 .. 26598245
1275 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G287700.1

Sequence Viewer

Length: 1275 bp
ATGACCAGGCGAAAAAAAAGAATTAGATGGACGGAAGCAGTGCCATCGGATAACAGAGTTAACGTTCCTGAAGATATCATCCACGACATCCTGCTGTTGTTGCCCATCAGATCTCTACTCACATGCACCGCAGTGTGCAAATCATGGAGGTCTCTAATCCAAAGCTCTGCCTTCATCCACACCCGCCTCAACCGCACAATCATTCAATCCAAGAAGCAAAACGACGATGGTCAGCTCCTACTGATTAACTATTACAGCGACAGAGAAAAAGCACGTATTTTCTCGCTGCATTGGGATAGTAGCCCTTCTTTCAGTGAGTATTCCAAGCTTCTAAATCCATTCGAAACTGCTTACAATCAAATTAAAGAAAGTCATAAAAAGAAATATTGCTGTGAAGAGGTGGTCGGAACATGTAACGGGCTCGTATGCCTGCATGGTTACACTTCCACATTAATTTGGAACCCTTGTATTAGGAAGTTTGTGATTTTGCCTCCGCCTAGTGTTGTTAACTTAACGGAAGTTAAGGTTACATGGAACCCAAATAAATATAAATCGAGCTATGCATTTGGATACGATTCACTTACCAACGACTATAAGGTTTTGAGAAGTGTTAGTAGTTATCTCGGCTTTAGGCGTGCAGTTGAGATTTGGTCCTTATCCAGCGGCTCCTGGAAGAGGCTTAGTGATGATGTTGTTCCTGCAAAATTCTCGCTTGGAGAATTTACTCAAAGGCACGCTGCTTTTCTTAATGGTGTTCTGCATTGGATTCATGGGGACGAGGAAAACAGTTTCATTGTGTCATTTGATTTGTCCACTGAATTATTTGGCAAGATCCTCATGCCCAAAACAGCTGTGAGAAGGAGTAAGAAGTCGTACGCCACCCATCTCGTATACGTGAGAAAAGAGGTTTCCGATCTTTCAAGATACCGGGACTCCCTTGCTTTTTTTGAGAGACGTCACAAAAATATGGATTGTGTTCGTGTTCACATGTGGGTGATGAAAGAGTATGGTGTTGCAGGATCCTGGGCTAAATTATTCACTATATCCCCGCAAGAAGTTGTGGTCGGGCCGCTTGGTTTCAGAAAGAGTGGCCAAGTAGTGCTCGCGTTGCATCGGGGTGGGCGTGATGGACAATTTTGTCGGTCGATGGACCCTAACACCAAACAATTCGAGGATTTTCGAGTGGAAGGGAGCTGCACCAAGTCCTACCTCTTCATGGATTCTTTTGTAGAGAGCATTGTTTTACTTGATCAACCCAATGCTATTTCATACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

425

Amino Acids

48.9

Weight (kDa)

9.38

Isoelectric Point (pI)

48.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1137
AatII GACGTC 1 cut(s) 958
AccI GTMKAC 1 cut(s) 891
AccII CGCG 1 cut(s) 1106
AciI CCGC 7 cut(s) 129, 184, 193, 494, 663, 1049, 1070
AclI AACGTT 1 cut(s) 63
AclWI GGATC 3 cut(s) 826, 1014, 1027
AcoI YGGCCR 1 cut(s) 1090
AcsI RAATTY 2 cut(s) 704, 719
AcuI CTGAAG 1 cut(s) 90
AcyI GRCGYC 1 cut(s) 955
AfaI GTAC 1 cut(s) 875
AfiI CCNNNNNNNGG 2 cut(s) 675, 1216
AflIII ACRYGT 2 cut(s) 410, 987
AgsI TTSAA 2 cut(s) 206, 921
AjnI CCWGG 3 cut(s) 5, 668, 1022
AleI CACNNNNGTG 1 cut(s) 131
AluBI AGCT 6 cut(s) 165, 235, 328, 558, 851, 1194
AluI AGCT 6 cut(s) 165, 235, 328, 558, 851, 1194
Alw21I GWGCWC 1 cut(s) 1104
Alw26I GTCTC 2 cut(s) 156, 946
AlwI GGATC 3 cut(s) 826, 1014, 1027
AoxI GGCC 2 cut(s) 1067, 1090
ApeKI GCWGC 3 cut(s) 286, 737, 1194
ApoI RAATTY 2 cut(s) 704, 719
AseI ATTAAT 1 cut(s) 452
AspS9I GGNCC 3 cut(s) 651, 1067, 1150
AsuC2I CCSGG 1 cut(s) 929
AsuHPI GGTGA 1 cut(s) 1006
AsuII TTCGAA 1 cut(s) 342
AvaII GGWCC 2 cut(s) 651, 1150
BalI TGGCCA 1 cut(s) 1092
BamHI GGATCC 1 cut(s) 1019
BanII GRGCYC 1 cut(s) 423
Bbv12I GWGCWC 1 cut(s) 1104
BbvI GCAGC 3 cut(s) 273, 724, 1181
BccI CCATC 7 cut(s) 21, 52, 113, 221, 891, 1121, 1141
BcgI CGANNNNNNTGC 4 cut(s) 27, 61, 690, 724
BciT130I CCWGG 3 cut(s) 7, 670, 1024
BciVI GTATCC 1 cut(s) 563
BclI TGATCA 1 cut(s) 1249
BcnI CCSGG 1 cut(s) 929
BcoDI GTCTC 2 cut(s) 156, 946
BfaI CTAG 2 cut(s) 498, 1273
BfuI GTATCC 1 cut(s) 563
BglII AGATCT 1 cut(s) 110
BisI GCNGC 5 cut(s) 287, 664, 738, 1070, 1195
BlsI GCNGC 5 cut(s) 288, 665, 739, 1071, 1196
Bme1390I CCNGG 4 cut(s) 7, 670, 929, 1024
Bme18I GGWCC 2 cut(s) 651, 1150
BmgT120I GGNCC 3 cut(s) 651, 1067, 1150
BmiI GGNNCC 5 cut(s) 461, 536, 667, 1021, 1152
BmrFI CCNGG 4 cut(s) 7, 670, 929, 1024
BmsI GCATC 1 cut(s) 1120
BoxI GACNNNNGTC 1 cut(s) 228
Bpu14I TTCGAA 1 cut(s) 342
BpuMI CCSGG 1 cut(s) 929
BsaAI YACGTR 2 cut(s) 275, 895
BsaHI GRCGYC 1 cut(s) 955
BsaI GGTCTC 1 cut(s) 156
BsaJI CCNNGG 1 cut(s) 1023
BsaXI ACNNNNNCTCC 2 cut(s) 917, 947
Bsc4I CCNNNNNNNGG 2 cut(s) 675, 1216
BseBI CCWGG 3 cut(s) 7, 670, 1024
BseDI CCNNGG 1 cut(s) 1023
BseGI GGATG 3 cut(s) 78, 87, 174
BseLI CCNNNNNNNGG 2 cut(s) 675, 1216
BseXI GCAGC 3 cut(s) 273, 724, 1181
BsgI GTGCAG 2 cut(s) 657, 1180
Bsh1236I CGCG 1 cut(s) 1106
Bsh1285I CGRYCG 1 cut(s) 1145
BshFI GGCC 2 cut(s) 1069, 1092
BsiEI CGRYCG 1 cut(s) 1145
BsiHKAI GWGCWC 1 cut(s) 1104
BsiSI CCGG 1 cut(s) 928
BsiWI CGTACG 1 cut(s) 873
BslFI GGGAC 2 cut(s) 788, 944
BslI CCNNNNNNNGG 2 cut(s) 675, 1216
BsmAI GTCTC 2 cut(s) 156, 946
BsmBI CGTCTC 1 cut(s) 946
BsmFI GGGAC 2 cut(s) 788, 944
BsnI GGCC 2 cut(s) 1069, 1092
Bso31I GGTCTC 1 cut(s) 156
Bsp119I TTCGAA 1 cut(s) 342
Bsp1286I GDGCHC 2 cut(s) 423, 1104
Bsp143I GATC 5 cut(s) 110, 831, 913, 1019, 1249
BspACI CCGC 7 cut(s) 129, 184, 193, 494, 663, 1049, 1070
BspANI GGCC 2 cut(s) 1069, 1092
BspFNI CGCG 1 cut(s) 1106
BspLI GGNNCC 5 cut(s) 461, 536, 667, 1021, 1152
BspPI GGATC 3 cut(s) 826, 1014, 1027
BspT104I TTCGAA 1 cut(s) 342
BspTNI GGTCTC 1 cut(s) 156
BssECI CCNNGG 1 cut(s) 1023
BssMI GATC 5 cut(s) 110, 831, 913, 1019, 1249
BssNAI GTATAC 1 cut(s) 892
BssNI GRCGYC 1 cut(s) 955
Bst1107I GTATAC 1 cut(s) 892
Bst2UI CCWGG 3 cut(s) 7, 670, 1024
Bst4CI ACNGT 1 cut(s) 788
Bst6I CTCTTC 3 cut(s) 390, 668, 1217
BstACI GRCGYC 1 cut(s) 955
BstBAI YACGTR 2 cut(s) 275, 895
BstBI TTCGAA 1 cut(s) 342
BstC8I GCNNGC 4 cut(s) 431, 636, 735, 1104
BstDEI CTNAG 1 cut(s) 680
BstENI CCTNNNNNAGG 1 cut(s) 673
BstF5I GGATG 3 cut(s) 78, 87, 174
BstFNI CGCG 1 cut(s) 1106
BstKTI GATC 5 cut(s) 113, 834, 916, 1022, 1252
BstMAI GTCTC 2 cut(s) 156, 946
BstMBI GATC 5 cut(s) 110, 831, 913, 1019, 1249
BstMCI CGRYCG 1 cut(s) 1145
BstMWI GCNNNNNNNGC 3 cut(s) 100, 192, 1108
BstNI CCWGG 3 cut(s) 7, 670, 1024
BstNSI RCATGY 3 cut(s) 126, 414, 991
BstPAI GACNNNNGTC 1 cut(s) 228
BstSCI CCNGG 4 cut(s) 5, 668, 927, 1022
BstUI CGCG 1 cut(s) 1106
BstV1I GCAGC 3 cut(s) 273, 724, 1181
BstX2I RGATCY 3 cut(s) 110, 831, 1019
BstYI RGATCY 3 cut(s) 110, 831, 1019
BstZ17I GTATAC 1 cut(s) 892
BsuI GTATCC 1 cut(s) 563
BsuRI GGCC 2 cut(s) 1069, 1092
BtsCI GGATG 3 cut(s) 78, 87, 174
BtsI GCAGTG 2 cut(s) 45, 138
BtsIMutI CAGTG 4 cut(s) 45, 138, 319, 813
Cac8I GCNNGC 4 cut(s) 431, 636, 735, 1104
Cfr13I GGNCC 3 cut(s) 651, 1067, 1150
Csp6I GTAC 1 cut(s) 874
CviAII CATG 9 cut(s) 123, 144, 411, 434, 531, 770, 838, 988, 1216
CviQI GTAC 1 cut(s) 874
DdeI CTNAG 1 cut(s) 680
DpnI GATC 5 cut(s) 112, 833, 915, 1021, 1251
DpnII GATC 5 cut(s) 110, 831, 913, 1019, 1249
DrdI GACNNNNNNGTC 1 cut(s) 1137
DseDI GACNNNNNNGTC 1 cut(s) 1137
EaeI YGGCCR 1 cut(s) 1090
Eam1104I CTCTTC 3 cut(s) 390, 668, 1217
EarI CTCTTC 3 cut(s) 390, 668, 1217
EciI GGCGGA 1 cut(s) 483
Eco24I GRGCYC 1 cut(s) 423
Eco31I GGTCTC 1 cut(s) 156
Eco32I GATATC 1 cut(s) 76
Eco47I GGWCC 2 cut(s) 651, 1150
Eco57I CTGAAG 1 cut(s) 90
EcoNI CCTNNNNNAGG 1 cut(s) 673
EcoRII CCWGG 3 cut(s) 5, 668, 1022
EcoRV GATATC 1 cut(s) 76
EcoT22I ATGCAT 1 cut(s) 565
EcoT38I GRGCYC 1 cut(s) 423
Esp3I CGTCTC 1 cut(s) 946
FaeI CATG 9 cut(s) 126, 147, 414, 437, 534, 773, 841, 991, 1219
FaqI GGGAC 2 cut(s) 788, 944
FatI CATG 9 cut(s) 122, 143, 410, 433, 530, 769, 837, 987, 1215
FauI CCCGC 2 cut(s) 191, 1056
FbaI TGATCA 1 cut(s) 1249
FblI GTMKAC 1 cut(s) 891
Fnu4HI GCNGC 5 cut(s) 287, 664, 738, 1070, 1195
FokI GGATG 3 cut(s) 65, 74, 161
FriOI GRGCYC 1 cut(s) 423
Fsp4HI GCNGC 5 cut(s) 287, 664, 738, 1070, 1195
FspBI CTAG 2 cut(s) 498, 1273
GluI GCNGC 5 cut(s) 287, 664, 738, 1070, 1195
HaeIII GGCC 2 cut(s) 1069, 1092
HapII CCGG 1 cut(s) 928
Hin1I GRCGYC 1 cut(s) 955
Hin1II CATG 9 cut(s) 126, 147, 414, 437, 534, 773, 841, 991, 1219
HincII GTYRAC 2 cut(s) 61, 508
HindII GTYRAC 2 cut(s) 61, 508
HindIII AAGCTT 1 cut(s) 326
HinfI GANTC 4 cut(s) 575, 766, 932, 1220
HpaI GTTAAC 2 cut(s) 61, 508
HpaII CCGG 1 cut(s) 928
HphI GGTGA 1 cut(s) 1006
Hpy166II GTNNAC 5 cut(s) 61, 508, 813, 892, 985
Hpy188I TCNGA 5 cut(s) 49, 110, 407, 913, 1082
Hpy188III TCNNGA 2 cut(s) 68, 921
Hpy8I GTNNAC 5 cut(s) 61, 508, 813, 892, 985
Hpy99I CGWCG 1 cut(s) 227
HpyAV CCTTC 4 cut(s) 181, 315, 852, 1181
HpyCH4III ACNGT 1 cut(s) 788
HpyCH4IV ACGT 4 cut(s) 63, 274, 894, 955
HpyF10VI GCNNNNNNNGC 3 cut(s) 100, 192, 1108
HpyF3I CTNAG 1 cut(s) 680
HpySE526I ACGT 4 cut(s) 63, 274, 894, 955
Hsp92I GRCGYC 1 cut(s) 955
Hsp92II CATG 9 cut(s) 126, 147, 414, 437, 534, 773, 841, 991, 1219
Ksp22I TGATCA 1 cut(s) 1249
KspAI GTTAAC 2 cut(s) 61, 508
Kzo9I GATC 5 cut(s) 110, 831, 913, 1019, 1249
LmnI GCTCC 3 cut(s) 240, 671, 1191
Lsp1109I GCAGC 3 cut(s) 273, 724, 1181
LweI GCATC 1 cut(s) 1120
MaeI CTAG 2 cut(s) 498, 1273
MaeII ACGT 4 cut(s) 63, 274, 894, 955
MaeIII GTNAC 4 cut(s) 413, 437, 526, 956
MalI GATC 5 cut(s) 112, 833, 915, 1021, 1251
MboI GATC 5 cut(s) 110, 831, 913, 1019, 1249
MboII GAAGA 4 cut(s) 83, 407, 685, 1204
MflI RGATCY 3 cut(s) 110, 831, 1019
MhlI GDGCHC 2 cut(s) 423, 1104
MlsI TGGCCA 1 cut(s) 1092
MluCI AATT 9 cut(s) 21, 360, 453, 704, 719, 818, 1031, 1133, 1166
MluNI TGGCCA 1 cut(s) 1092
MlyI GAGTC 1 cut(s) 926
MmeI TCCRAC 1 cut(s) 385
Mox20I TGGCCA 1 cut(s) 1092
Mph1103I ATGCAT 1 cut(s) 565
MscI TGGCCA 1 cut(s) 1092
MseI TTAA 8 cut(s) 60, 246, 363, 452, 507, 512, 522, 747
MslI CAYNNNNRTG 3 cut(s) 131, 992, 1116
Msp20I TGGCCA 1 cut(s) 1092
MspA1I CMGCKG 2 cut(s) 663, 851
MspI CCGG 1 cut(s) 928
MspR9I CCNGG 4 cut(s) 7, 670, 929, 1024
MvaI CCWGG 3 cut(s) 7, 670, 1024
MvnI CGCG 1 cut(s) 1106
MwoI GCNNNNNNNGC 3 cut(s) 100, 192, 1108
NciI CCSGG 1 cut(s) 929
NdeII GATC 5 cut(s) 110, 831, 913, 1019, 1249
NlaIII CATG 9 cut(s) 126, 147, 414, 437, 534, 773, 841, 991, 1219
NlaIV GGNNCC 5 cut(s) 461, 536, 667, 1021, 1152
NmeAIII GCCGAG 1 cut(s) 603
NmuCI GTSAC 1 cut(s) 956
NsiI ATGCAT 1 cut(s) 565
NspI RCATGY 3 cut(s) 126, 414, 991
NspV TTCGAA 1 cut(s) 342
OliI CACNNNNGTG 1 cut(s) 131
PciI ACATGT 2 cut(s) 410, 987
PcsI WCGNNNNNNNCGW 1 cut(s) 1120
PfeI GAWTC 3 cut(s) 575, 766, 1220
Pfl23II CGTACG 1 cut(s) 873
PfoI TCCNGGA 1 cut(s) 668
PkrI GCNGC 5 cut(s) 288, 665, 739, 1071, 1196
PleI GAGTC 1 cut(s) 926
PpsI GAGTC 1 cut(s) 926
Ppu21I YACGTR 2 cut(s) 275, 895
PscI ACATGT 2 cut(s) 410, 987
PshAI GACNNNNGTC 1 cut(s) 228
PshBI ATTAAT 1 cut(s) 452
Psp1406I AACGTT 1 cut(s) 63
Psp6I CCWGG 3 cut(s) 5, 668, 1022
PspGI CCWGG 3 cut(s) 5, 668, 1022
PspLI CGTACG 1 cut(s) 873
PspN4I GGNNCC 5 cut(s) 461, 536, 667, 1021, 1152
PspPI GGNCC 3 cut(s) 651, 1067, 1150
PsuI RGATCY 3 cut(s) 110, 831, 1019
PvuII CAGCTG 1 cut(s) 851
RsaI GTAC 1 cut(s) 875
RsaNI GTAC 1 cut(s) 874
RseI CAYNNNNRTG 3 cut(s) 131, 992, 1116
SaqAI TTAA 8 cut(s) 60, 246, 363, 452, 507, 512, 522, 747
SatI GCNGC 5 cut(s) 287, 664, 738, 1070, 1195
Sau3AI GATC 5 cut(s) 110, 831, 913, 1019, 1249
Sau96I GGNCC 3 cut(s) 651, 1067, 1150
SchI GAGTC 1 cut(s) 926
ScrFI CCNGG 4 cut(s) 7, 670, 929, 1024
SduI GDGCHC 2 cut(s) 423, 1104
SfaNI GCATC 1 cut(s) 1120
SfuI TTCGAA 1 cut(s) 342
SinI GGWCC 2 cut(s) 651, 1150
SmiMI CAYNNNNRTG 3 cut(s) 131, 992, 1116
Sse9I AATT 9 cut(s) 21, 360, 453, 704, 719, 818, 1031, 1133, 1166
SsiI CCGC 7 cut(s) 129, 184, 193, 494, 663, 1049, 1070
SspI AATATT 1 cut(s) 386
SspMI CTAG 2 cut(s) 498, 1273
StyD4I CCNGG 4 cut(s) 5, 668, 927, 1022
TaaI ACNGT 1 cut(s) 788
TaiI ACGT 4 cut(s) 66, 277, 897, 958
TaqI TCGA 5 cut(s) 342, 554, 1145, 1170, 1180
TaqII GACCGA 1 cut(s) 1131
TasI AATT 9 cut(s) 21, 360, 453, 704, 719, 818, 1031, 1133, 1166
TauI GCSGC 2 cut(s) 666, 1072
TfiI GAWTC 3 cut(s) 575, 766, 1220
Tru1I TTAA 8 cut(s) 60, 246, 363, 452, 507, 512, 522, 747
Tru9I TTAA 8 cut(s) 60, 246, 363, 452, 507, 512, 522, 747
TscAI CASTG 4 cut(s) 45, 138, 319, 820
TseFI GTSAC 1 cut(s) 956
TseI GCWGC 3 cut(s) 286, 737, 1194
Tsp45I GTSAC 1 cut(s) 956
TspDTI ATGAA 6 cut(s) 163, 758, 781, 1013, 1204, 1257
TspGWI ACGGA 2 cut(s) 47, 530
TspRI CASTG 4 cut(s) 45, 138, 319, 820
VpaK11BI GGWCC 2 cut(s) 651, 1150
VspI ATTAAT 1 cut(s) 452
XagI CCTNNNNNAGG 1 cut(s) 673
XapI RAATTY 2 cut(s) 704, 719
XceI RCATGY 3 cut(s) 126, 414, 991
XmiI GTMKAC 1 cut(s) 891
XspI CTAG 2 cut(s) 498, 1273
ZraI GACGTC 1 cut(s) 956
Zsp2I ATGCAT 1 cut(s) 565
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.