Rmu_sc0003368.1_g000011

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003368.1
OG0000068
Physical Location & Seq
Reverse (-)
45968 .. 47062
1095 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003368.1_g000011.1.cds

Sequence Viewer

Length: 1095 bp
atggcagtacccggcaattttcctgaagatctcatagaagaaatcctcctgaagttgcccatcaagtcattaatcagattcagcgaagtgtgcaagtcttggaattccctgatcaagagccctaacttcatttacacccaactcaaccacactatccaatccaacaaccaaaacgactctcacctacttctactggaagggcttctctcttcgactaagattttcttgttgcatccagcacataaccctacattcgatgtagacaaaaagcttacggaaccctccgccatcaacacaactgcagtctctttctcattaaagaacttttctgtggtcggaacctgtaatggtctggtatgccttgctaattacatccatggtgttgcagtaatttggaaccccatagttagaaagtatgtgatactgcctagttgtagtgttaggtcattgagtggttttgtgaggtttgcttttggctacgattcacgtaccaatgactataaggttttgaaaactgttgtttgtgatcaaaagcctagtcatgttgaagtttggtcactggcgaggggttcctggatgagtcttgatcctgccattattcctccggactttaaacctcgagactatagctacttgcgatatccttttgtaaatggtactttgcattgggttggtctgcgacatggtattatcatgacgtttgatatgtccactgagttatttggagagataatgatgcctgaagttgtgacaagagatgcagaaaacaaatttatatccaaataccgggagtctctcgctttgttgtgtaagagtaatgaaaattcaattcacatatgggtgatgaaagagtatggttcggcagattcatggattcaattatcaactttaccccaaggaagttggactcggccattatgttttacggagagttgtgatgaactagtgcttcaaagggatggtgtagggctgcaatcagtggaccttaagagcaaaacagttaacaagttacctgataatatatacctatactccatgaattcttatacggagagccttgtgttacttggggattcgaatgctgtctcttattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

364

Amino Acids

41.14

Weight (kDa)

6.51

Isoelectric Point (pI)

40.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 261
AccIII TCCGGA 1 cut(s) 604
AciI CCGC 1 cut(s) 285
AclWI GGATC 1 cut(s) 581
AcoI YGGCCR 1 cut(s) 911
AcsI RAATTY 4 cut(s) 103, 770, 823, 1039
AcuI CTGAAG 3 cut(s) 45, 71, 762
AfaI GTAC 3 cut(s) 9, 490, 658
AfiI CCNNNNNNNGG 1 cut(s) 786
AflII CTTAAG 1 cut(s) 986
AgsI TTSAA 5 cut(s) 511, 548, 828, 878, 953
AhlI ACTAGT 1 cut(s) 943
AjnI CCWGG 1 cut(s) 572
AluBI AGCT 2 cut(s) 271, 630
AluI AGCT 2 cut(s) 271, 630
Alw26I GTCTC 4 cut(s) 310, 615, 798, 1090
AlwI GGATC 1 cut(s) 581
Ama87I CYCGRG 1 cut(s) 618
Aor13HI TCCGGA 1 cut(s) 604
AoxI GGCC 1 cut(s) 911
ApeKI GCWGC 1 cut(s) 970
ApoI RAATTY 4 cut(s) 103, 770, 823, 1039
ArsI GACNNNNNNTTYG 2 cut(s) 523, 555
AseI ATTAAT 1 cut(s) 71
Asp700I GAANNNNTTC 1 cut(s) 201
AspS9I GGNCC 1 cut(s) 982
AsuC2I CCSGG 2 cut(s) 12, 788
AsuHPI GGTGA 2 cut(s) 173, 853
AsuII TTCGAA 1 cut(s) 1076
AvaI CYCGRG 1 cut(s) 618
AvaII GGWCC 1 cut(s) 982
BanII GRGCYC 1 cut(s) 122
BbvI GCAGC 1 cut(s) 957
BccI CCATC 3 cut(s) 68, 296, 953
BciT130I CCWGG 1 cut(s) 574
BclI TGATCA 2 cut(s) 111, 526
BcnI CCSGG 2 cut(s) 12, 788
BcoDI GTCTC 4 cut(s) 310, 615, 798, 1090
BcuI ACTAGT 1 cut(s) 943
BfaI CTAG 3 cut(s) 429, 537, 944
BfmI CTRYAG 2 cut(s) 300, 625
BfrI CTTAAG 1 cut(s) 986
BglII AGATCT 1 cut(s) 28
BisI GCNGC 1 cut(s) 971
BlsI GCNGC 1 cut(s) 972
Bme1390I CCNGG 3 cut(s) 12, 574, 788
Bme18I GGWCC 1 cut(s) 982
BmeT110I CYCGRG 1 cut(s) 618
BmgT120I GGNCC 1 cut(s) 982
BmiI GGNNCC 4 cut(s) 279, 340, 398, 571
BmrFI CCNGG 3 cut(s) 12, 574, 788
BmsI GCATC 3 cut(s) 241, 726, 748
Bpu14I TTCGAA 1 cut(s) 1076
BpuMI CCSGG 2 cut(s) 12, 788
BsaAI YACGTR 1 cut(s) 488
BsaJI CCNNGG 2 cut(s) 376, 895
BsaWI WCCGGW 1 cut(s) 604
BsaXI ACNNNNNCTCC 2 cut(s) 1016, 1046
Bsc4I CCNNNNNNNGG 1 cut(s) 786
Bse1I ACTGG 2 cut(s) 198, 564
BseAI TCCGGA 1 cut(s) 604
BseBI CCWGG 1 cut(s) 574
BseDI CCNNGG 2 cut(s) 376, 895
BseGI GGATG 4 cut(s) 232, 372, 582, 964
BseLI CCNNNNNNNGG 1 cut(s) 786
BseMII CTCAG 1 cut(s) 705
BseNI ACTGG 2 cut(s) 198, 564
BseXI GCAGC 1 cut(s) 957
BshFI GGCC 1 cut(s) 913
BsiHKCI CYCGRG 1 cut(s) 618
BsiSI CCGG 3 cut(s) 12, 605, 787
BslI CCNNNNNNNGG 1 cut(s) 786
BsmAI GTCTC 4 cut(s) 310, 615, 798, 1090
BsmI GAATGC 1 cut(s) 1084
BsnI GGCC 1 cut(s) 913
BsoBI CYCGRG 1 cut(s) 618
Bsp119I TTCGAA 1 cut(s) 1076
Bsp1286I GDGCHC 1 cut(s) 122
Bsp13I TCCGGA 1 cut(s) 604
Bsp143I GATC 4 cut(s) 28, 111, 526, 586
Bsp19I CCATGG 1 cut(s) 376
BspACI CCGC 1 cut(s) 285
BspANI GGCC 1 cut(s) 913
BspCNI CTCAG 1 cut(s) 706
BspEI TCCGGA 1 cut(s) 604
BspHI TCATGA 1 cut(s) 693
BspLI GGNNCC 4 cut(s) 279, 340, 398, 571
BspMAI CTGCAG 1 cut(s) 304
BspPI GGATC 1 cut(s) 581
BspT104I TTCGAA 1 cut(s) 1076
BspTI CTTAAG 1 cut(s) 986
BsrI ACTGG 2 cut(s) 198, 564
BssECI CCNNGG 2 cut(s) 376, 895
BssMI GATC 4 cut(s) 28, 111, 526, 586
BssT1I CCWWGG 2 cut(s) 376, 895
Bst2UI CCWGG 1 cut(s) 574
Bst4CI ACNGT 2 cut(s) 517, 1000
Bst6I CTCTTC 1 cut(s) 214
BstAFI CTTAAG 1 cut(s) 986
BstBAI YACGTR 1 cut(s) 488
BstBI TTCGAA 1 cut(s) 1076
BstDEI CTNAG 2 cut(s) 216, 714
BstDSI CCRYGG 1 cut(s) 376
BstF5I GGATG 4 cut(s) 232, 372, 582, 964
BstKTI GATC 4 cut(s) 31, 114, 529, 589
BstMAI GTCTC 4 cut(s) 310, 615, 798, 1090
BstMBI GATC 4 cut(s) 28, 111, 526, 586
BstMWI GCNNNNNNNGC 1 cut(s) 90
BstNI CCWGG 1 cut(s) 574
BstSCI CCNGG 3 cut(s) 10, 572, 786
BstSFI CTRYAG 2 cut(s) 300, 625
BstV1I GCAGC 1 cut(s) 957
BstX2I RGATCY 1 cut(s) 28
BstYI RGATCY 1 cut(s) 28
BsuRI GGCC 1 cut(s) 913
BtgI CCRYGG 1 cut(s) 376
BtsCI GGATG 4 cut(s) 232, 372, 582, 964
BtsIMutI CAGTG 3 cut(s) 557, 711, 984
CciI TCATGA 1 cut(s) 693
Cfr13I GGNCC 1 cut(s) 982
Csp6I GTAC 3 cut(s) 8, 489, 657
CviAII CATG 6 cut(s) 377, 542, 683, 694, 870, 1036
CviJI RGCY 9 cut(s) 120, 202, 271, 477, 535, 630, 913, 970, 1056
CviKI_1 RGCY 9 cut(s) 120, 202, 271, 477, 535, 630, 913, 970, 1056
CviQI GTAC 3 cut(s) 8, 489, 657
DdeI CTNAG 2 cut(s) 216, 714
DpnI GATC 4 cut(s) 30, 113, 528, 588
DpnII GATC 4 cut(s) 28, 111, 526, 586
DraI TTTAAA 1 cut(s) 613
EaeI YGGCCR 1 cut(s) 911
Eam1104I CTCTTC 1 cut(s) 214
EarI CTCTTC 1 cut(s) 214
EciI GGCGGA 1 cut(s) 274
Eco130I CCWWGG 2 cut(s) 376, 895
Eco24I GRGCYC 1 cut(s) 122
Eco32I GATATC 1 cut(s) 641
Eco47I GGWCC 1 cut(s) 982
Eco57I CTGAAG 3 cut(s) 45, 71, 762
Eco88I CYCGRG 1 cut(s) 618
EcoRI GAATTC 2 cut(s) 103, 1039
EcoRII CCWGG 1 cut(s) 572
EcoRV GATATC 1 cut(s) 641
EcoT14I CCWWGG 2 cut(s) 376, 895
EcoT38I GRGCYC 1 cut(s) 122
ErhI CCWWGG 2 cut(s) 376, 895
FaeI CATG 6 cut(s) 380, 545, 686, 697, 873, 1039
FalI AAGNNNNNCTT 2 cut(s) 209, 241
FatI CATG 6 cut(s) 376, 541, 682, 693, 869, 1035
FauNDI CATATG 1 cut(s) 836
FbaI TGATCA 2 cut(s) 111, 526
FblI GTMKAC 1 cut(s) 261
Fnu4HI GCNGC 1 cut(s) 971
FokI GGATG 4 cut(s) 219, 359, 589, 971
FriOI GRGCYC 1 cut(s) 122
Fsp4HI GCNGC 1 cut(s) 971
FspBI CTAG 3 cut(s) 429, 537, 944
GluI GCNGC 1 cut(s) 971
HaeIII GGCC 1 cut(s) 913
HapII CCGG 3 cut(s) 12, 605, 787
Hin1II CATG 6 cut(s) 380, 545, 686, 697, 873, 1039
HincII GTYRAC 1 cut(s) 1003
HindII GTYRAC 1 cut(s) 1003
HindIII AAGCTT 1 cut(s) 269
HinfI GANTC 9 cut(s) 78, 176, 482, 580, 791, 866, 874, 907, 1073
HpaI GTTAAC 1 cut(s) 1003
HpaII CCGG 3 cut(s) 12, 605, 787
HphI GGTGA 2 cut(s) 173, 853
Hpy166II GTNNAC 4 cut(s) 262, 711, 982, 1003
Hpy188I TCNGA 2 cut(s) 77, 338
Hpy188III TCNNGA 7 cut(s) 23, 49, 115, 584, 605, 620, 694
Hpy8I GTNNAC 4 cut(s) 262, 711, 982, 1003
HpyAV CCTTC 1 cut(s) 191
HpyCH4III ACNGT 2 cut(s) 517, 1000
HpyCH4IV ACGT 2 cut(s) 487, 698
HpyCH4V TGCA 7 cut(s) 93, 232, 302, 386, 664, 761, 973
HpyF10VI GCNNNNNNNGC 1 cut(s) 90
HpyF3I CTNAG 2 cut(s) 216, 714
HpySE526I ACGT 2 cut(s) 487, 698
Hsp92II CATG 6 cut(s) 380, 545, 686, 697, 873, 1039
Kpn2I TCCGGA 1 cut(s) 604
Ksp22I TGATCA 2 cut(s) 111, 526
KspAI GTTAAC 1 cut(s) 1003
Kzo9I GATC 4 cut(s) 28, 111, 526, 586
Lsp1109I GCAGC 1 cut(s) 957
LweI GCATC 3 cut(s) 241, 726, 748
MaeI CTAG 3 cut(s) 429, 537, 944
MaeII ACGT 2 cut(s) 487, 698
MaeIII GTNAC 4 cut(s) 555, 748, 1008, 1062
MalI GATC 4 cut(s) 30, 113, 528, 588
MboI GATC 4 cut(s) 28, 111, 526, 586
MboII GAAGA 3 cut(s) 38, 50, 201
MflI RGATCY 1 cut(s) 28
MhlI GDGCHC 1 cut(s) 122
MluCI AATT 9 cut(s) 16, 103, 367, 390, 770, 823, 828, 878, 1039
MlyI GAGTC 4 cut(s) 170, 589, 800, 901
MmeI TCCRAC 3 cut(s) 186, 316, 884
MnlI CCTC 6 cut(s) 56, 292, 456, 558, 612, 627
MroI TCCGGA 1 cut(s) 604
MroXI GAANNNNTTC 1 cut(s) 201
MseI TTAA 5 cut(s) 71, 317, 612, 987, 1002
MslI CAYNNNNRTG 1 cut(s) 839
MspCI CTTAAG 1 cut(s) 986
MspI CCGG 3 cut(s) 12, 605, 787
MspR9I CCNGG 3 cut(s) 12, 574, 788
Mva1269I GAATGC 1 cut(s) 1084
MvaI CCWGG 1 cut(s) 574
MwoI GCNNNNNNNGC 1 cut(s) 90
NciI CCSGG 2 cut(s) 12, 788
NcoI CCATGG 1 cut(s) 376
NdeI CATATG 1 cut(s) 836
NdeII GATC 4 cut(s) 28, 111, 526, 586
NlaIII CATG 6 cut(s) 380, 545, 686, 697, 873, 1039
NlaIV GGNNCC 4 cut(s) 279, 340, 398, 571
NmeAIII GCCGAG 1 cut(s) 889
NmuCI GTSAC 2 cut(s) 555, 748
NspV TTCGAA 1 cut(s) 1076
PaeR7I CTCGAG 1 cut(s) 618
PagI TCATGA 1 cut(s) 693
PctI GAATGC 1 cut(s) 1084
PdmI GAANNNNTTC 1 cut(s) 201
PfeI GAWTC 5 cut(s) 78, 482, 866, 874, 1073
PfoI TCCNGGA 1 cut(s) 572
PkrI GCNGC 1 cut(s) 972
PleI GAGTC 4 cut(s) 170, 588, 799, 901
PpsI GAGTC 4 cut(s) 170, 588, 799, 901
Ppu21I YACGTR 1 cut(s) 488
PshBI ATTAAT 1 cut(s) 71
Psp6I CCWGG 1 cut(s) 572
PspGI CCWGG 1 cut(s) 572
PspN4I GGNNCC 4 cut(s) 279, 340, 398, 571
PspPI GGNCC 1 cut(s) 982
PstI CTGCAG 1 cut(s) 304
PsuI RGATCY 1 cut(s) 28
RsaI GTAC 3 cut(s) 9, 490, 658
RsaNI GTAC 3 cut(s) 8, 489, 657
RseI CAYNNNNRTG 1 cut(s) 839
SaqAI TTAA 5 cut(s) 71, 317, 612, 987, 1002
SatI GCNGC 1 cut(s) 971
Sau3AI GATC 4 cut(s) 28, 111, 526, 586
Sau96I GGNCC 1 cut(s) 982
SchI GAGTC 4 cut(s) 170, 589, 800, 901
ScrFI CCNGG 3 cut(s) 12, 574, 788
SduI GDGCHC 1 cut(s) 122
SfaNI GCATC 3 cut(s) 241, 726, 748
SfcI CTRYAG 2 cut(s) 300, 625
Sfr274I CTCGAG 1 cut(s) 618
SfuI TTCGAA 1 cut(s) 1076
SinI GGWCC 1 cut(s) 982
SlaI CTCGAG 1 cut(s) 618
SmiMI CAYNNNNRTG 1 cut(s) 839
SmlI CTYRAG 2 cut(s) 618, 986
SmoI CTYRAG 2 cut(s) 618, 986
SpeI ACTAGT 1 cut(s) 943
Sse9I AATT 9 cut(s) 16, 103, 367, 390, 770, 823, 828, 878, 1039
SsiI CCGC 1 cut(s) 285
SspMI CTAG 3 cut(s) 429, 537, 944
StyD4I CCNGG 3 cut(s) 10, 572, 786
StyI CCWWGG 2 cut(s) 376, 895
TaaI ACNGT 2 cut(s) 517, 1000
TaiI ACGT 2 cut(s) 490, 701
TaqI TCGA 4 cut(s) 212, 255, 619, 1076
TasI AATT 9 cut(s) 16, 103, 367, 390, 770, 823, 828, 878, 1039
TfiI GAWTC 5 cut(s) 78, 482, 866, 874, 1073
Tru1I TTAA 5 cut(s) 71, 317, 612, 987, 1002
Tru9I TTAA 5 cut(s) 71, 317, 612, 987, 1002
TscAI CASTG 3 cut(s) 564, 718, 984
TseFI GTSAC 2 cut(s) 555, 748
TseI GCWGC 1 cut(s) 970
Tsp45I GTSAC 2 cut(s) 555, 748
TspDTI ATGAA 6 cut(s) 118, 834, 858, 860, 954, 1052
TspGWI ACGGA 3 cut(s) 290, 941, 1064
TspRI CASTG 3 cut(s) 564, 718, 984
Vha464I CTTAAG 1 cut(s) 986
VpaK11BI GGWCC 1 cut(s) 982
VspI ATTAAT 1 cut(s) 71
XapI RAATTY 4 cut(s) 103, 770, 823, 1039
XhoI CTCGAG 1 cut(s) 618
XmiI GTMKAC 1 cut(s) 261
XmnI GAANNNNTTC 1 cut(s) 201
XspI CTAG 3 cut(s) 429, 537, 944
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.