Rroxscaffold_1G00042090

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000068
Physical Location & Seq
Reverse (-)
60094351 .. 60095475
1125 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00042090.1

Sequence Viewer

Length: 1125 bp
ATGTCAGACCACCTTCTTGAGGGAACCATACACGAAATCCTTAAAAGGTTGCCCATAAAATCTGTAATCCGTTGCTGCTTAGTGTGTAGGTCATGGAAATCTCTGATCGAAAGCTCTACCCACCTCAGCCGCAAAGTCCAATCCAACGACCAAAACGACCCTCACTTCCTTCTAGTAAACCCTCCGCTCAACTGGTGTCTTTGGGACGTTGGTGACTATATCAACATCGAAAATCCTTACCTTCACCTTACAGAATCAATTTTCCCCAAAGATGAAAGACTTCTAGTCAAGAATTTCAATGTGGTGGGAACTTGTAACGGGCTAGTGTGCTTTGCTTTTGACTTTGCCTATTATGGTTCCATAGCAGTAATTTGGAACCCTTGTATCAGAAAGTATGTGACTTTGCCTAAGCGTCGTGTTTCAAACCCTAAGGATGGCAGTGACTTTAACATAGCAAGTTATGCTTTTGGCTATGATTCGCGGACCATGGACTACAAGGTTTTGAGAACTGTCAGTGATTTTGGTGGCGAAACAGAGATTTGGTCCTTGGCTACGGGCAACTGGAAAATCCTTCGTGCTCCTATGCCAAAGGATTTTCCGCGTCACGGTGATAATGTCAGATATGCTTATGTCAATGGTGCAGTGCATTGGGTGCATCACCGTCGTAGGGGTCGAAGGCATAAGGCCATTGTGGATACTGCTATTGTGTTGTTTGATATGGCCAGTGAGTTATTTCGGGAGATGATGATGATGCCAGAAGATTTGAGAGGAAAGCATTGCCATATTTCAAGATACATGGAGTCCATTGGTTTATTTACGGGGACAGATTTGGAGAGTTTCGGTACTATTGATGTCGACATGTGGGTGATGAGAGATTATGGAGCTGTGGAATCCTGCACAAAATTATTTACTATACGTCTGGAAGGACCTCAGCTACAGCCATTTGGTTTTAAAAAGAATGGTAGTGAAGCAGTGTTCAAAATGAGTGGTGGACGGGTACTAACAGTGGATCTTAAGACAAAGAAAGTTGGAGAATTTGCAATCAATAATGAATACAAGTACTACGGCTTCTTGGACTGCTTTGCAGAGAGCCTTGCCTTACTTGGCCATGCTAAATCTTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

374

Amino Acids

42.96

Weight (kDa)

8.57

Isoelectric Point (pI)

45.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 10 - 39 1.5e-08 F-box domain
F-box-like PF12937 11 - 45 4e-06 F-box-like
FBA_1 PF07734 75 - 317 4.8e-18 F-box associated beta propeller domain
FBA_3 PF08268 97 - 303 6.4e-19 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 187
AccI GTMKAC 1 cut(s) 855
AccII CGCG 2 cut(s) 481, 601
AciI CCGC 4 cut(s) 130, 185, 481, 599
AclWI GGATC 1 cut(s) 1017
AcoI YGGCCR 2 cut(s) 720, 1105
AcsI RAATTY 2 cut(s) 292, 1034
AfaI GTAC 3 cut(s) 844, 999, 1061
AfiI CCNNNNNNNGG 4 cut(s) 19, 434, 605, 667
AflII CTTAAG 1 cut(s) 1013
AflIII ACRYGT 1 cut(s) 858
AgsI TTSAA 4 cut(s) 298, 423, 789, 979
AhdI GACNNNNNGTC 1 cut(s) 284
AluBI AGCT 3 cut(s) 114, 884, 934
AluI AGCT 3 cut(s) 114, 884, 934
Alw21I GWGCWC 1 cut(s) 580
AlwI GGATC 1 cut(s) 1017
AoxI GGCC 3 cut(s) 684, 720, 1105
ApeKI GCWGC 1 cut(s) 75
ApoI RAATTY 2 cut(s) 292, 1034
Asp700I GAANNNNTTC 1 cut(s) 279
AspS9I GGNCC 3 cut(s) 483, 543, 926
AsuHPI GGTGA 5 cut(s) 224, 236, 620, 650, 877
AvaII GGWCC 3 cut(s) 483, 543, 926
AxyI CCTNAGG 1 cut(s) 429
BaeI ACNNNNGTAYC 2 cut(s) 367, 400
BalI TGGCCA 2 cut(s) 722, 1107
BarI GAAGNNNNNNTAC 2 cut(s) 1052, 1084
Bbv12I GWGCWC 1 cut(s) 580
BbvCI CCTCAGC 2 cut(s) 125, 930
BbvI GCAGC 1 cut(s) 62
BccI CCATC 1 cut(s) 428
BceAI ACGGC 1 cut(s) 1081
BcgI CGANNNNNNTGC 2 cut(s) 644, 678
BciVI GTATCC 1 cut(s) 688
BfaI CTAG 3 cut(s) 173, 284, 323
BfmI CTRYAG 1 cut(s) 935
BfrI CTTAAG 1 cut(s) 1013
BfuI GTATCC 1 cut(s) 688
BisI GCNGC 2 cut(s) 76, 130
BlsI GCNGC 2 cut(s) 77, 131
BmcAI AGTACT 1 cut(s) 1061
Bme18I GGWCC 3 cut(s) 483, 543, 926
BmeRI GACNNNNNGTC 1 cut(s) 284
BmgT120I GGNCC 3 cut(s) 483, 543, 926
BmiI GGNNCC 3 cut(s) 25, 358, 377
BmsI GCATC 2 cut(s) 664, 741
Bpu10I CCTNAGC 3 cut(s) 125, 408, 930
BpuEI CTTGAG 1 cut(s) 38
BsaJI CCNNGG 2 cut(s) 486, 546
Bsc4I CCNNNNNNNGG 4 cut(s) 19, 434, 605, 667
Bse1I ACTGG 3 cut(s) 197, 566, 723
Bse21I CCTNAGG 1 cut(s) 429
Bse3DI GCAATG 1 cut(s) 775
BseDI CCNNGG 2 cut(s) 486, 546
BseGI GGATG 1 cut(s) 439
BseLI CCNNNNNNNGG 4 cut(s) 19, 434, 605, 667
BseMI GCAATG 1 cut(s) 775
BseMII CTCAG 2 cut(s) 139, 944
BseNI ACTGG 3 cut(s) 197, 566, 723
BseXI GCAGC 1 cut(s) 62
BsgI GTGCAG 2 cut(s) 660, 880
Bsh1236I CGCG 2 cut(s) 481, 601
BshFI GGCC 3 cut(s) 686, 722, 1107
BsiHKAI GWGCWC 1 cut(s) 580
BslFI GGGAC 2 cut(s) 218, 835
BslI CCNNNNNNNGG 4 cut(s) 19, 434, 605, 667
BsmFI GGGAC 2 cut(s) 218, 835
BsnI GGCC 3 cut(s) 686, 722, 1107
Bsp1286I GDGCHC 1 cut(s) 580
Bsp143I GATC 2 cut(s) 105, 1009
Bsp19I CCATGG 1 cut(s) 486
BspACI CCGC 4 cut(s) 130, 185, 481, 599
BspANI GGCC 3 cut(s) 686, 722, 1107
BspCNI CTCAG 2 cut(s) 138, 943
BspFNI CGCG 2 cut(s) 481, 601
BspLI GGNNCC 3 cut(s) 25, 358, 377
BspPI GGATC 1 cut(s) 1017
BspTI CTTAAG 1 cut(s) 1013
BsrBI CCGCTC 1 cut(s) 187
BsrDI GCAATG 1 cut(s) 775
BsrI ACTGG 3 cut(s) 197, 566, 723
BssECI CCNNGG 2 cut(s) 486, 546
BssMI GATC 2 cut(s) 105, 1009
BssT1I CCWWGG 2 cut(s) 486, 546
Bst4CI ACNGT 4 cut(s) 511, 608, 662, 1006
BstAFI CTTAAG 1 cut(s) 1013
BstAPI GCANNNNNTGC 2 cut(s) 461, 652
BstDEI CTNAG 5 cut(s) 79, 125, 408, 429, 930
BstDSI CCRYGG 1 cut(s) 486
BstENI CCTNNNNNAGG 1 cut(s) 17
BstF5I GGATG 1 cut(s) 439
BstFNI CGCG 2 cut(s) 481, 601
BstKTI GATC 2 cut(s) 108, 1012
BstMBI GATC 2 cut(s) 105, 1009
BstMWI GCNNNNNNNGC 2 cut(s) 461, 652
BstNSI RCATGY 1 cut(s) 862
BstSFI CTRYAG 1 cut(s) 935
BstUI CGCG 2 cut(s) 481, 601
BstV1I GCAGC 1 cut(s) 62
BstX2I RGATCY 1 cut(s) 1009
BstYI RGATCY 1 cut(s) 1009
Bsu36I CCTNAGG 1 cut(s) 429
BsuI GTATCC 1 cut(s) 688
BsuRI GGCC 3 cut(s) 686, 722, 1107
BtgI CCRYGG 1 cut(s) 486
BtsCI GGATG 1 cut(s) 439
BtsI GCAGTG 3 cut(s) 445, 648, 978
BtsIMutI CAGTG 6 cut(s) 445, 520, 648, 730, 978, 1011
Cfr13I GGNCC 3 cut(s) 483, 543, 926
CseI GACGC 2 cut(s) 401, 590
Csp6I GTAC 3 cut(s) 843, 998, 1060
CspCI CAANNNNNGTGG 2 cut(s) 967, 1002
CviAII CATG 5 cut(s) 93, 487, 796, 859, 1109
CviQI GTAC 3 cut(s) 843, 998, 1060
DdeI CTNAG 5 cut(s) 79, 125, 408, 429, 930
DpnI GATC 2 cut(s) 107, 1011
DpnII GATC 2 cut(s) 105, 1009
DraI TTTAAA 1 cut(s) 952
DriI GACNNNNNGTC 1 cut(s) 284
EaeI YGGCCR 2 cut(s) 720, 1105
Eam1105I GACNNNNNGTC 1 cut(s) 284
Eco130I CCWWGG 2 cut(s) 486, 546
Eco47I GGWCC 3 cut(s) 483, 543, 926
Eco81I CCTNAGG 1 cut(s) 429
EcoNI CCTNNNNNAGG 1 cut(s) 17
EcoO109I RGGNCCY 1 cut(s) 926
EcoT14I CCWWGG 2 cut(s) 486, 546
ErhI CCWWGG 2 cut(s) 486, 546
FaeI CATG 5 cut(s) 96, 490, 799, 862, 1112
FalI AAGNNNNNCTT 2 cut(s) 448, 480
FaqI GGGAC 2 cut(s) 218, 835
FatI CATG 5 cut(s) 92, 486, 795, 858, 1108
FblI GTMKAC 1 cut(s) 855
Fnu4HI GCNGC 2 cut(s) 76, 130
FokI GGATG 1 cut(s) 446
Fsp4HI GCNGC 2 cut(s) 76, 130
FspBI CTAG 3 cut(s) 173, 284, 323
GluI GCNGC 2 cut(s) 76, 130
HaeIII GGCC 3 cut(s) 686, 722, 1107
HgaI GACGC 2 cut(s) 401, 590
Hin1II CATG 5 cut(s) 96, 490, 799, 862, 1112
HincII GTYRAC 1 cut(s) 856
HindII GTYRAC 1 cut(s) 856
HinfI GANTC 4 cut(s) 254, 476, 800, 890
HphI GGTGA 5 cut(s) 224, 236, 620, 650, 877
Hpy166II GTNNAC 3 cut(s) 178, 856, 992
Hpy188I TCNGA 4 cut(s) 7, 105, 389, 620
Hpy188III TCNNGA 5 cut(s) 17, 289, 737, 789, 920
Hpy8I GTNNAC 3 cut(s) 178, 856, 992
Hpy99I CGWCG 2 cut(s) 417, 666
HpyAV CCTTC 6 cut(s) 23, 179, 251, 581, 669, 917
HpyCH4III ACNGT 4 cut(s) 511, 608, 662, 1006
HpyCH4IV ACGT 2 cut(s) 207, 916
HpyCH4V TGCA 6 cut(s) 641, 646, 655, 897, 1040, 1085
HpyF10VI GCNNNNNNNGC 2 cut(s) 461, 652
HpyF3I CTNAG 5 cut(s) 79, 125, 408, 429, 930
HpySE526I ACGT 2 cut(s) 207, 916
Hsp92II CATG 5 cut(s) 96, 490, 799, 862, 1112
Kzo9I GATC 2 cut(s) 105, 1009
LmnI GCTCC 2 cut(s) 583, 881
LpnPI CCDG 6 cut(s) 178, 547, 736, 768, 905, 907
Lsp1109I GCAGC 1 cut(s) 62
LweI GCATC 2 cut(s) 664, 741
MaeI CTAG 3 cut(s) 173, 284, 323
MaeII ACGT 2 cut(s) 207, 916
MaeIII GTNAC 5 cut(s) 212, 314, 397, 440, 602
MalI GATC 2 cut(s) 107, 1011
MbiI CCGCTC 1 cut(s) 187
MboI GATC 2 cut(s) 105, 1009
MboII GAAGA 1 cut(s) 770
MflI RGATCY 1 cut(s) 1009
MhlI GDGCHC 1 cut(s) 580
MlsI TGGCCA 2 cut(s) 722, 1107
MluCI AATT 5 cut(s) 258, 292, 369, 902, 1034
MluNI TGGCCA 2 cut(s) 722, 1107
MlyI GAGTC 1 cut(s) 809
MmeI TCCRAC 2 cut(s) 168, 1009
MnlI CCTC 6 cut(s) 13, 134, 171, 192, 761, 939
Mox20I TGGCCA 2 cut(s) 722, 1107
MroXI GAANNNNTTC 1 cut(s) 279
MscI TGGCCA 2 cut(s) 722, 1107
MseI TTAA 5 cut(s) 42, 447, 951, 1014, 1123
MslI CAYNNNNRTG 1 cut(s) 863
Msp20I TGGCCA 2 cut(s) 722, 1107
MspCI CTTAAG 1 cut(s) 1013
MvnI CGCG 2 cut(s) 481, 601
MwoI GCNNNNNNNGC 2 cut(s) 461, 652
NcoI CCATGG 1 cut(s) 486
NdeII GATC 2 cut(s) 105, 1009
NlaIII CATG 5 cut(s) 96, 490, 799, 862, 1112
NlaIV GGNNCC 3 cut(s) 25, 358, 377
NmuCI GTSAC 4 cut(s) 212, 397, 440, 602
NspI RCATGY 1 cut(s) 862
PciI ACATGT 1 cut(s) 858
PcsI WCGNNNNNNNCGW 2 cut(s) 153, 670
PdmI GAANNNNTTC 1 cut(s) 279
PfeI GAWTC 3 cut(s) 254, 476, 890
PkrI GCNGC 2 cut(s) 77, 131
PleI GAGTC 1 cut(s) 808
PpsI GAGTC 1 cut(s) 808
PpuMI RGGWCCY 1 cut(s) 926
PscI ACATGT 1 cut(s) 858
Psp5II RGGWCCY 1 cut(s) 926
PspN4I GGNNCC 3 cut(s) 25, 358, 377
PspPI GGNCC 3 cut(s) 483, 543, 926
PspPPI RGGWCCY 1 cut(s) 926
PsuI RGATCY 1 cut(s) 1009
RsaI GTAC 3 cut(s) 844, 999, 1061
RsaNI GTAC 3 cut(s) 843, 998, 1060
RseI CAYNNNNRTG 1 cut(s) 863
SalI GTCGAC 1 cut(s) 854
SaqAI TTAA 5 cut(s) 42, 447, 951, 1014, 1123
SatI GCNGC 2 cut(s) 76, 130
Sau3AI GATC 2 cut(s) 105, 1009
Sau96I GGNCC 3 cut(s) 483, 543, 926
ScaI AGTACT 1 cut(s) 1061
SchI GAGTC 1 cut(s) 809
SduI GDGCHC 1 cut(s) 580
SfaNI GCATC 2 cut(s) 664, 741
SfcI CTRYAG 1 cut(s) 935
SinI GGWCC 3 cut(s) 483, 543, 926
SmiMI CAYNNNNRTG 1 cut(s) 863
SmlI CTYRAG 2 cut(s) 17, 1013
SmoI CTYRAG 2 cut(s) 17, 1013
Sse9I AATT 5 cut(s) 258, 292, 369, 902, 1034
SsiI CCGC 4 cut(s) 130, 185, 481, 599
SspMI CTAG 3 cut(s) 173, 284, 323
StyI CCWWGG 2 cut(s) 486, 546
TaaI ACNGT 4 cut(s) 511, 608, 662, 1006
TaiI ACGT 2 cut(s) 210, 919
TaqI TCGA 4 cut(s) 108, 228, 673, 855
TasI AATT 5 cut(s) 258, 292, 369, 902, 1034
TatI WGTACW 1 cut(s) 1059
TauI GCSGC 1 cut(s) 132
TfiI GAWTC 3 cut(s) 254, 476, 890
Tru1I TTAA 5 cut(s) 42, 447, 951, 1014, 1123
Tru9I TTAA 5 cut(s) 42, 447, 951, 1014, 1123
TscAI CASTG 6 cut(s) 445, 520, 648, 730, 978, 1011
TseFI GTSAC 4 cut(s) 212, 397, 440, 602
TseI GCWGC 1 cut(s) 75
Tsp45I GTSAC 4 cut(s) 212, 397, 440, 602
TspDTI ATGAA 2 cut(s) 288, 1065
TspGWI ACGGA 1 cut(s) 59
TspRI CASTG 6 cut(s) 445, 520, 648, 730, 978, 1011
Vha464I CTTAAG 1 cut(s) 1013
VpaK11BI GGWCC 3 cut(s) 483, 543, 926
XagI CCTNNNNNAGG 1 cut(s) 17
XapI RAATTY 2 cut(s) 292, 1034
XceI RCATGY 1 cut(s) 862
XmiI GTMKAC 1 cut(s) 855
XmnI GAANNNNTTC 1 cut(s) 279
XspI CTAG 3 cut(s) 173, 284, 323
ZrmI AGTACT 1 cut(s) 1061
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.