FvH4_3g16840

F-box kelch-repeat protein At3g23880-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000068
Physical Location & Seq
Reverse (-)
10642234 .. 10645270
3037 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g16840.t1

Sequence Viewer

Length: 1164 bp
ATGTTAGAGAATTTTCCTGAAGAAATCGGACATGATATCCTATTCAGACTACCTATCGTGTGTCTGGTCAGATGCACATCGGTGAGCAAGGCATGGATGTCCATTATCAGAAGTTCAAGCTTTATTCACTCCCACCTCAACCGCAAAAACCACCCTAGTAACCACCATGAGACTCCTCAACTTCTACTGCACGGTGCCCGCTTTCCAGCTTCTACTGCATTGTCGCCGCCACCAACTACAGAAGAGCCTAAAGATGTGTGCTGTTTGCATTATGATAACAACCATGATTTTGATGACTGCTGTCAGATAGATTTTCTATTTAGCGGATTGGTAAGGCAGGCAAATAGGCGCTTCCGTGTGGCTGGCATTTGTGACGGGATAGTGTTTATTGAGGATGATTTAGTATGGAAAAGGTACACCTTATGGAACCCAGCAATAGGAAAGGCAGTGATGCTTCCTTGGCCTGGTTTGATTCATGGTCCTTTTGAAGAGTCTGTTGGGTTTGGTTTTGATGCTTTGGCCAACGACTACAAGGTTGTTCGGCTTGTCACTCCTCAGATTTCTTTTGATTATGCGAAAAGTCCTACTGTGGCTGAGGTTTATTCACTAGCCACGGGATCATGGAGAAGTCTTGGTTTAGTTGTTCCTCCATGCCGAATAGATAGAACAAGACCATACACCTATTGTAATAGCGCTATTCATTGGACTGTAAGACATTGGAAAGATGATCATTATTTCATTTTGGCATTGGATCTTGGCAGTGAGTCGTTTCGCGAGATAAGGATGCCAAAGGGTACTGAATTGCACTTGGAATCTGAAGTTTCTGTTTCAGGAGATGGGAAATCTCTTTCTCTGTTCACAGAGTATTGTGATTATTATGTTGACCTATGGTTAATGAAAGAGTATTGCAAACAGGAGTCATGGATAAGTCTCTGTCGACAAGGTCCAGAAGGATGTTTGCCCCGTCCATTATGTTTCAGAAAGAGCGGTGAAGTAATTTTGGCACTGAGAAACAATGAAAGGGAAAGTGAAAGCTTAGTTTCGCTTGACACTGTGAGCCAACAATTCAACAATCTCGGGAGTTCAGAGTATCGATATTGCTCTATTCATTCTTATGAAGAGAGCCTTGTTTTACTTGACATGGACAGTGCAGTATCTTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

388

Amino Acids

44.2

Weight (kDa)

5.67

Isoelectric Point (pI)

53.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 2 - 42 9.3e-07 F-box domain
FBA_1 PF07734 123 - 377 1.3e-15 F-box associated beta propeller domain
FBA_3 PF08268 126 - 310 5.9e-12 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 194
AccBSI CCGCTC 1 cut(s) 987
AccI GTMKAC 1 cut(s) 937
AccII CGCG 1 cut(s) 774
AciI CCGC 5 cut(s) 142, 199, 227, 324, 987
AclWI GGATC 2 cut(s) 625, 759
AcoI YGGCCR 1 cut(s) 519
AcsI RAATTY 1 cut(s) 10
AcuI CTGAAG 2 cut(s) 39, 837
AfaI GTAC 2 cut(s) 416, 796
AfeI AGCGCT 1 cut(s) 694
AfiI CCNNNNNNNGG 2 cut(s) 437, 464
AgsI TTSAA 3 cut(s) 117, 488, 1069
AjnI CCWGG 1 cut(s) 463
AjuI GAANNNNNNNTTGG 2 cut(s) 480, 512
AleI CACNNNNGTG 1 cut(s) 80
AluBI AGCT 3 cut(s) 120, 209, 1035
AluI AGCT 3 cut(s) 120, 209, 1035
Alw26I GTCTC 2 cut(s) 164, 935
AlwI GGATC 2 cut(s) 625, 759
Ama87I CYCGRG 1 cut(s) 1076
Aor51HI AGCGCT 1 cut(s) 694
AoxI GGCC 2 cut(s) 461, 519
ApoI RAATTY 1 cut(s) 10
AspLEI GCGC 2 cut(s) 351, 695
AspS9I GGNCC 2 cut(s) 479, 944
AsuHPI GGTGA 2 cut(s) 94, 1001
AvaI CYCGRG 1 cut(s) 1076
AvaII GGWCC 2 cut(s) 479, 944
BaeGI GKGCMC 1 cut(s) 199
BalI TGGCCA 1 cut(s) 521
BanI GGYRCC 1 cut(s) 194
BbvCI CCTCAGC 1 cut(s) 594
BccI CCATC 1 cut(s) 830
BciT130I CCWGG 1 cut(s) 465
BclI TGATCA 1 cut(s) 727
BcoDI GTCTC 2 cut(s) 164, 935
BfaI CTAG 2 cut(s) 156, 608
BfmI CTRYAG 1 cut(s) 237
BfoI RGCGCY 2 cut(s) 352, 696
BisI GCNGC 1 cut(s) 227
BlsI GCNGC 1 cut(s) 228
Bme1390I CCNGG 1 cut(s) 465
Bme18I GGWCC 2 cut(s) 479, 944
BmeT110I CYCGRG 1 cut(s) 1076
BmgT120I GGNCC 2 cut(s) 479, 944
BmiI GGNNCC 2 cut(s) 196, 428
BmrFI CCNGG 1 cut(s) 465
BmsI GCATC 4 cut(s) 62, 441, 502, 774
BoxI GACNNNNGTC 1 cut(s) 300
Bpu10I CCTNAGC 1 cut(s) 594
Bsa29I ATCGAT 1 cut(s) 1093
BsaBI GATNNNNATC 1 cut(s) 76
BsaJI CCNNGG 2 cut(s) 458, 612
Bsc4I CCNNNNNNNGG 2 cut(s) 437, 464
Bse8I GATNNNNATC 1 cut(s) 76
BseBI CCWGG 1 cut(s) 465
BseCI ATCGAT 1 cut(s) 1093
BseDI CCNNGG 2 cut(s) 458, 612
BseGI GGATG 4 cut(s) 102, 400, 789, 959
BseJI GATNNNNATC 1 cut(s) 76
BseLI CCNNNNNNNGG 2 cut(s) 437, 464
BseMII CTCAG 3 cut(s) 569, 585, 998
BseRI GAGGAG 2 cut(s) 165, 543
BseSI GKGCMC 1 cut(s) 199
BseYI CCCAGC 1 cut(s) 430
BsgI GTGCAG 1 cut(s) 173
Bsh1236I CGCG 1 cut(s) 774
BshFI GGCC 2 cut(s) 463, 521
BshNI GGYRCC 1 cut(s) 194
BshVI ATCGAT 1 cut(s) 1093
BsiHKCI CYCGRG 1 cut(s) 1076
BslI CCNNNNNNNGG 2 cut(s) 437, 464
BsmAI GTCTC 2 cut(s) 164, 935
BsnI GGCC 2 cut(s) 463, 521
BsoBI CYCGRG 1 cut(s) 1076
Bsp1286I GDGCHC 1 cut(s) 199
Bsp143I GATC 3 cut(s) 617, 727, 751
Bsp68I TCGCGA 1 cut(s) 774
BspACI CCGC 5 cut(s) 142, 199, 227, 324, 987
BspANI GGCC 2 cut(s) 463, 521
BspCNI CTCAG 3 cut(s) 568, 586, 999
BspDI ATCGAT 1 cut(s) 1093
BspFNI CGCG 1 cut(s) 774
BspLI GGNNCC 2 cut(s) 196, 428
BspPI GGATC 2 cut(s) 625, 759
BspQI GCTCTTC 1 cut(s) 237
BspT107I GGYRCC 1 cut(s) 194
BsrBI CCGCTC 1 cut(s) 987
BssECI CCNNGG 2 cut(s) 458, 612
BssMI GATC 3 cut(s) 617, 727, 751
BssT1I CCWWGG 1 cut(s) 458
Bst2UI CCWGG 1 cut(s) 465
Bst4CI ACNGT 5 cut(s) 194, 589, 709, 1054, 1148
Bst6I CTCTTC 3 cut(s) 237, 483, 1113
BstC8I GCNNGC 3 cut(s) 199, 339, 364
BstDEI CTNAG 4 cut(s) 555, 594, 1007, 1036
BstDSI CCRYGG 1 cut(s) 612
BstF5I GGATG 4 cut(s) 102, 400, 789, 959
BstFNI CGCG 1 cut(s) 774
BstH2I RGCGCY 2 cut(s) 352, 696
BstHHI GCGC 2 cut(s) 351, 695
BstKTI GATC 3 cut(s) 620, 730, 754
BstMAI GTCTC 2 cut(s) 164, 935
BstMBI GATC 3 cut(s) 617, 727, 751
BstMWI GCNNNNNNNGC 2 cut(s) 215, 460
BstNI CCWGG 1 cut(s) 465
BstPAI GACNNNNGTC 1 cut(s) 300
BstSCI CCNGG 1 cut(s) 463
BstSFI CTRYAG 1 cut(s) 237
BstSLI GKGCMC 1 cut(s) 199
BstUI CGCG 1 cut(s) 774
BstX2I RGATCY 1 cut(s) 751
BstYI RGATCY 1 cut(s) 751
Bsu15I ATCGAT 1 cut(s) 1093
BsuRI GGCC 2 cut(s) 463, 521
BsuTUI ATCGAT 1 cut(s) 1093
BtgI CCRYGG 1 cut(s) 612
BtsCI GGATG 4 cut(s) 102, 400, 789, 959
BtsI GCAGTG 2 cut(s) 453, 766
BtsIMutI CAGTG 5 cut(s) 453, 766, 1004, 1050, 1153
BtuMI TCGCGA 1 cut(s) 774
Cac8I GCNNGC 3 cut(s) 199, 339, 364
CfoI GCGC 2 cut(s) 351, 695
Cfr13I GGNCC 2 cut(s) 479, 944
ClaI ATCGAT 1 cut(s) 1093
Csp6I GTAC 2 cut(s) 415, 795
CviAII CATG 9 cut(s) 32, 93, 167, 284, 476, 621, 651, 921, 1141
CviQI GTAC 2 cut(s) 415, 795
DdeI CTNAG 4 cut(s) 555, 594, 1007, 1036
DpnI GATC 3 cut(s) 619, 729, 753
DpnII GATC 3 cut(s) 617, 727, 751
EaeI YGGCCR 1 cut(s) 519
Eam1104I CTCTTC 3 cut(s) 237, 483, 1113
EarI CTCTTC 3 cut(s) 237, 483, 1113
Eco130I CCWWGG 1 cut(s) 458
Eco32I GATATC 1 cut(s) 37
Eco47I GGWCC 2 cut(s) 479, 944
Eco47III AGCGCT 1 cut(s) 694
Eco57I CTGAAG 2 cut(s) 39, 837
Eco88I CYCGRG 1 cut(s) 1076
EcoRII CCWGG 1 cut(s) 463
EcoRV GATATC 1 cut(s) 37
EcoT14I CCWWGG 1 cut(s) 458
ErhI CCWWGG 1 cut(s) 458
FaeI CATG 9 cut(s) 35, 96, 170, 287, 479, 624, 654, 924, 1144
FalI AAGNNNNNCTT 2 cut(s) 1110, 1142
FatI CATG 9 cut(s) 31, 92, 166, 283, 475, 620, 650, 920, 1140
FauI CCCGC 1 cut(s) 206
FbaI TGATCA 1 cut(s) 727
FblI GTMKAC 1 cut(s) 937
Fnu4HI GCNGC 1 cut(s) 227
FokI GGATG 4 cut(s) 109, 407, 796, 966
Fsp4HI GCNGC 1 cut(s) 227
FspBI CTAG 2 cut(s) 156, 608
GlaI GCGC 2 cut(s) 350, 694
GluI GCNGC 1 cut(s) 227
GsaI CCCAGC 1 cut(s) 434
HaeII RGCGCY 2 cut(s) 352, 696
HaeIII GGCC 2 cut(s) 463, 521
HhaI GCGC 2 cut(s) 351, 695
Hin1II CATG 9 cut(s) 35, 96, 170, 287, 479, 624, 654, 924, 1144
Hin6I GCGC 2 cut(s) 349, 693
HinP1I GCGC 2 cut(s) 349, 693
HincII GTYRAC 2 cut(s) 883, 938
HindII GTYRAC 2 cut(s) 883, 938
HindIII AAGCTT 2 cut(s) 118, 1033
HinfI GANTC 6 cut(s) 172, 472, 491, 764, 812, 917
HphI GGTGA 2 cut(s) 94, 1001
Hpy166II GTNNAC 4 cut(s) 417, 858, 883, 938
Hpy188I TCNGA 9 cut(s) 29, 47, 71, 110, 306, 558, 817, 980, 1087
Hpy188III TCNNGA 5 cut(s) 17, 773, 831, 947, 1078
Hpy8I GTNNAC 4 cut(s) 417, 858, 883, 938
HpyAV CCTTC 1 cut(s) 944
HpyCH4III ACNGT 5 cut(s) 194, 589, 709, 1054, 1148
HpyCH4V TGCA 7 cut(s) 75, 190, 218, 268, 805, 909, 1151
HpyF10VI GCNNNNNNNGC 2 cut(s) 215, 460
HpyF3I CTNAG 4 cut(s) 555, 594, 1007, 1036
Hsp92II CATG 9 cut(s) 35, 96, 170, 287, 479, 624, 654, 924, 1144
HspAI GCGC 2 cut(s) 349, 693
Ksp22I TGATCA 1 cut(s) 727
Kzo9I GATC 3 cut(s) 617, 727, 751
LguI GCTCTTC 1 cut(s) 237
LweI GCATC 4 cut(s) 62, 441, 502, 774
MaeI CTAG 2 cut(s) 156, 608
MaeIII GTNAC 3 cut(s) 158, 371, 547
MalI GATC 3 cut(s) 619, 729, 753
MbiI CCGCTC 1 cut(s) 987
MboI GATC 3 cut(s) 617, 727, 751
MboII GAAGA 4 cut(s) 32, 254, 500, 1130
MflI RGATCY 1 cut(s) 751
MhlI GDGCHC 1 cut(s) 199
MlsI TGGCCA 1 cut(s) 521
MluCI AATT 4 cut(s) 10, 800, 996, 1064
MluNI TGGCCA 1 cut(s) 521
MlyI GAGTC 4 cut(s) 166, 500, 773, 926
MnlI CCTC 6 cut(s) 146, 186, 385, 564, 589, 657
Mox20I TGGCCA 1 cut(s) 521
MscI TGGCCA 1 cut(s) 521
MseI TTAA 2 cut(s) 893, 1162
MslI CAYNNNNRTG 2 cut(s) 80, 1113
Msp20I TGGCCA 1 cut(s) 521
MspR9I CCNGG 1 cut(s) 465
MvaI CCWGG 1 cut(s) 465
MvnI CGCG 1 cut(s) 774
MwoI GCNNNNNNNGC 2 cut(s) 215, 460
NdeII GATC 3 cut(s) 617, 727, 751
NlaIII CATG 9 cut(s) 35, 96, 170, 287, 479, 624, 654, 924, 1144
NlaIV GGNNCC 2 cut(s) 196, 428
NmuCI GTSAC 2 cut(s) 371, 547
NruI TCGCGA 1 cut(s) 774
OliI CACNNNNGTG 1 cut(s) 80
PciSI GCTCTTC 1 cut(s) 237
PfeI GAWTC 2 cut(s) 472, 812
PflFI GACNNNGTC 1 cut(s) 942
PkrI GCNGC 1 cut(s) 228
PleI GAGTC 4 cut(s) 166, 499, 772, 925
PpsI GAGTC 4 cut(s) 166, 499, 772, 925
PshAI GACNNNNGTC 1 cut(s) 300
Psp6I CCWGG 1 cut(s) 463
PspFI CCCAGC 1 cut(s) 430
PspGI CCWGG 1 cut(s) 463
PspN4I GGNNCC 2 cut(s) 196, 428
PspPI GGNCC 2 cut(s) 479, 944
PsuI RGATCY 1 cut(s) 751
PsyI GACNNNGTC 1 cut(s) 942
RruI TCGCGA 1 cut(s) 774
RsaI GTAC 2 cut(s) 416, 796
RsaNI GTAC 2 cut(s) 415, 795
RseI CAYNNNNRTG 2 cut(s) 80, 1113
SalI GTCGAC 1 cut(s) 936
SapI GCTCTTC 1 cut(s) 237
SaqAI TTAA 2 cut(s) 893, 1162
SatI GCNGC 1 cut(s) 227
Sau3AI GATC 3 cut(s) 617, 727, 751
Sau96I GGNCC 2 cut(s) 479, 944
SchI GAGTC 4 cut(s) 166, 500, 773, 926
ScrFI CCNGG 1 cut(s) 465
SduI GDGCHC 1 cut(s) 199
SfaNI GCATC 4 cut(s) 62, 441, 502, 774
SfcI CTRYAG 1 cut(s) 237
SinI GGWCC 2 cut(s) 479, 944
SmiMI CAYNNNNRTG 2 cut(s) 80, 1113
Sse9I AATT 4 cut(s) 10, 800, 996, 1064
SsiI CCGC 5 cut(s) 142, 199, 227, 324, 987
SspMI CTAG 2 cut(s) 156, 608
StyD4I CCNGG 1 cut(s) 463
StyI CCWWGG 1 cut(s) 458
TaaI ACNGT 5 cut(s) 194, 589, 709, 1054, 1148
TaqI TCGA 2 cut(s) 937, 1093
TasI AATT 4 cut(s) 10, 800, 996, 1064
TauI GCSGC 1 cut(s) 229
TfiI GAWTC 2 cut(s) 472, 812
Tru1I TTAA 2 cut(s) 893, 1162
Tru9I TTAA 2 cut(s) 893, 1162
TscAI CASTG 5 cut(s) 453, 766, 1011, 1057, 1153
TseFI GTSAC 2 cut(s) 371, 547
Tsp45I GTSAC 2 cut(s) 371, 547
TspDTI ATGAA 7 cut(s) 464, 689, 727, 911, 1032, 1097, 1131
TspGWI ACGGA 1 cut(s) 344
TspRI CASTG 5 cut(s) 453, 766, 1011, 1057, 1153
Tth111I GACNNNGTC 1 cut(s) 942
VpaK11BI GGWCC 2 cut(s) 479, 944
XapI RAATTY 1 cut(s) 10
XmiI GTMKAC 1 cut(s) 937
XspI CTAG 2 cut(s) 156, 608
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.