Rw3G022140

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0000068
Physical Location & Seq
Reverse (-)
27028489 .. 27029801
1313 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G022140.1

Sequence Viewer

Length: 1191 bp
ATGTCAGACTACTTTCCTGAGGAAATCATACAAAGAATCCTGTTGAGGTTGCCTACGAAATCCCTAATCAAATCCACCCTAGTCTGCAAGTCATGGATGTCACTCATCAAATCCTCTACCTTCATTCAATCCCATCTCTCCATCACAATCGACTCCAACAACCAAAACGACGCCCACCTCCTCCTCCTCAGCGCTTTCTCTTACAAGGTTTCTGATCGTCTGCACTGGTTGCATTGGGATAGCCCTGAATTCGGTGAGTATTCCTTGCTTGCAGACCCAGTCACTTTCTTGGAAAACGAACCTATTTCCGATCTGGAGGTAGTCGGAACTTGTAACGGGCTCATATGCCTTGCGCCTGACCTATCTGATAACCATTCCCTCACTTTAATTTGGAACCCATGTATTAGAAAGATTGTGATTTTGCCTAGCCCACCTGCTTGTTTTACCTCTACTCAGTATGATAAGTACATAGAGCATGCCTTTGGCTATGATTCACATTCCAGTGACTATAAGGTGTTGAGAATTGTGACTCTTCCTGATGATCATTCGGACTTGTCCCGATTCGCCACCGTGGTTCAGGTTTACTCATTAGCCAGGGGCTCCTGGAAGACTCTTGATGCTTCTGTTGTTCCTGTAGATTTGCAGGGGGGTGGTTCTGGTATTGTATTTCTCAATGGTTCTCTGCATATGCTTGAAGTTCGTTTAAGTGTCGGATATGATGATCATGCGGATGAATATTGTAAGTATGGTGGAGATACTTTCATTGCTTCATTTGATATGGCCACCGAATTATTTGGCGAGGTGATGATGCCAGAAGCTTTGCAGAGGAACAGATGTACCATTTCAAAATATGGGGACTCCCTTGCCTTGATTAAGCATTATGATTATAACTGTGGTTGTGACATATGGGTAATGAAAAAGTATGGTGTCACAGAATCGTGGACATATTTGTACAAGATAGCTGGGGATCATGATTATATATATGGTTTCAAAAGGTGTGGGGAAGTTGTTCTGAGTGAGTTCAATAATCATGGTCGGTCAAGAATGATTTCGCTGGATCCTAAGACCAAACAAGTTCAAGTTTTCGGAAATAAGGATTATACTTACTACTTCATGGATTCTTTTGTAGAGAGTCTCATCTTGCTTGACCACGTCAATGCCATTTCGTACCAACGAGCAAGGAAGAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

396

Amino Acids

45.08

Weight (kDa)

5.58

Isoelectric Point (pI)

38.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 5 - 41 1.1e-08 F-box domain
F-box-like PF12937 6 - 39 2.2e-06 F-box-like
FBA_3 PF08268 103 - 370 1.8e-19 F-box associated beta propeller domain
FBA_1 PF07734 104 - 340 9.3e-25 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 888
AarI CACCTGC 1 cut(s) 442
Acc36I ACCTGC 1 cut(s) 442
AciI CCGC 1 cut(s) 728
AclWI GGATC 3 cut(s) 975, 1052, 1065
AcoI YGGCCR 1 cut(s) 780
AcsI RAATTY 1 cut(s) 248
AcyI GRCGYC 1 cut(s) 171
AfaI GTAC 4 cut(s) 467, 838, 953, 1169
AfeI AGCGCT 1 cut(s) 193
AfiI CCNNNNNNNGG 1 cut(s) 251
AgsI TTSAA 6 cut(s) 128, 695, 846, 991, 1024, 1079
AjiI CACGTC 1 cut(s) 1153
AjnI CCWGG 2 cut(s) 593, 602
AluBI AGCT 2 cut(s) 818, 962
AluI AGCT 2 cut(s) 818, 962
Alw26I GTCTC 1 cut(s) 1139
AlwI GGATC 3 cut(s) 975, 1052, 1065
Aor51HI AGCGCT 1 cut(s) 193
AoxI GGCC 1 cut(s) 780
ApoI RAATTY 1 cut(s) 248
Asp700I GAANNNNTTC 2 cut(s) 1008, 1048
AspLEI GCGC 2 cut(s) 194, 355
AsuHPI GGTGA 2 cut(s) 266, 814
AxyI CCTNAGG 1 cut(s) 18
BaeI ACNNNNGTAYC 2 cut(s) 820, 853
BalI TGGCCA 1 cut(s) 782
BamHI GGATCC 1 cut(s) 1057
BanII GRGCYC 2 cut(s) 342, 602
BbsI GAAGAC 1 cut(s) 614
BbvCI CCTCAGC 1 cut(s) 188
BccI CCATC 2 cut(s) 141, 149
BciT130I CCWGG 2 cut(s) 595, 604
BclI TGATCA 2 cut(s) 541, 721
BcoDI GTCTC 1 cut(s) 1139
BfaI CTAG 2 cut(s) 80, 426
BfmI CTRYAG 1 cut(s) 633
BfoI RGCGCY 1 cut(s) 195
BfuAI ACCTGC 1 cut(s) 442
Bme1390I CCNGG 2 cut(s) 595, 604
BmgBI CACGTC 1 cut(s) 1153
BmiI GGNNCC 3 cut(s) 395, 601, 1059
BmrFI CCNGG 2 cut(s) 595, 604
BmrI ACTGGG 1 cut(s) 272
BmsI GCATC 2 cut(s) 607, 798
BmuI ACTGGG 1 cut(s) 272
BpiI GAAGAC 1 cut(s) 614
BpmI CTGGAG 1 cut(s) 335
Bpu10I CCTNAGC 1 cut(s) 188
BsaHI GRCGYC 1 cut(s) 171
BsaJI CCNNGG 2 cut(s) 570, 594
Bsc4I CCNNNNNNNGG 1 cut(s) 251
Bse1I ACTGG 3 cut(s) 230, 278, 501
Bse21I CCTNAGG 1 cut(s) 18
Bse3DI GCAATG 1 cut(s) 762
BseBI CCWGG 2 cut(s) 595, 604
BseDI CCNNGG 2 cut(s) 570, 594
BseGI GGATG 2 cut(s) 102, 736
BseLI CCNNNNNNNGG 1 cut(s) 251
BseMI GCAATG 1 cut(s) 762
BseMII CTCAG 4 cut(s) 9, 202, 467, 1004
BseNI ACTGG 3 cut(s) 230, 278, 501
BseRI GAGGAG 3 cut(s) 170, 173, 176
BseYI CCCAGC 1 cut(s) 962
BsgI GTGCAG 1 cut(s) 206
BshFI GGCC 1 cut(s) 782
BslFI GGGAC 2 cut(s) 541, 869
BslI CCNNNNNNNGG 1 cut(s) 251
BsmAI GTCTC 1 cut(s) 1139
BsmFI GGGAC 2 cut(s) 541, 869
BsnI GGCC 1 cut(s) 782
Bsp1286I GDGCHC 2 cut(s) 342, 602
Bsp1407I TGTACA 1 cut(s) 951
Bsp143I GATC 6 cut(s) 214, 310, 541, 721, 967, 1057
BspACI CCGC 1 cut(s) 728
BspANI GGCC 1 cut(s) 782
BspCNI CTCAG 4 cut(s) 10, 201, 466, 1005
BspHI TCATGA 1 cut(s) 970
BspLI GGNNCC 3 cut(s) 395, 601, 1059
BspMI ACCTGC 1 cut(s) 442
BspPI GGATC 3 cut(s) 975, 1052, 1065
BsrDI GCAATG 1 cut(s) 762
BsrGI TGTACA 1 cut(s) 951
BsrI ACTGG 3 cut(s) 230, 278, 501
BssECI CCNNGG 2 cut(s) 570, 594
BssMI GATC 6 cut(s) 214, 310, 541, 721, 967, 1057
BssNI GRCGYC 1 cut(s) 171
Bst2UI CCWGG 2 cut(s) 595, 604
Bst4CI ACNGT 2 cut(s) 571, 893
Bst6I CTCTTC 1 cut(s) 537
BstACI GRCGYC 1 cut(s) 171
BstAPI GCANNNNNTGC 1 cut(s) 229
BstAUI TGTACA 1 cut(s) 951
BstC8I GCNNGC 2 cut(s) 270, 477
BstDEI CTNAG 5 cut(s) 18, 188, 453, 1013, 1062
BstDSI CCRYGG 1 cut(s) 570
BstF5I GGATG 2 cut(s) 102, 736
BstH2I RGCGCY 1 cut(s) 195
BstHHI GCGC 2 cut(s) 194, 355
BstKTI GATC 6 cut(s) 217, 313, 544, 724, 970, 1060
BstMAI GTCTC 1 cut(s) 1139
BstMBI GATC 6 cut(s) 214, 310, 541, 721, 967, 1057
BstMWI GCNNNNNNNGC 1 cut(s) 229
BstNI CCWGG 2 cut(s) 595, 604
BstNSI RCATGY 1 cut(s) 479
BstSCI CCNGG 2 cut(s) 593, 602
BstSFI CTRYAG 1 cut(s) 633
BstV2I GAAGAC 1 cut(s) 614
BstX2I RGATCY 1 cut(s) 1057
BstYI RGATCY 1 cut(s) 1057
Bsu36I CCTNAGG 1 cut(s) 18
BsuRI GGCC 1 cut(s) 782
BtgI CCRYGG 1 cut(s) 570
BtrI CACGTC 1 cut(s) 1153
BtsCI GGATG 2 cut(s) 102, 736
BtsIMutI CAGTG 2 cut(s) 223, 508
BveI ACCTGC 1 cut(s) 442
Cac8I GCNNGC 2 cut(s) 270, 477
CciI TCATGA 1 cut(s) 970
CfoI GCGC 2 cut(s) 194, 355
CseI GACGC 1 cut(s) 179
Csp6I GTAC 4 cut(s) 466, 837, 952, 1168
CspCI CAANNNNNGTGG 2 cut(s) 979, 1014
CviAII CATG 7 cut(s) 93, 399, 476, 725, 971, 1031, 1114
CviJI RGCY 9 cut(s) 243, 340, 429, 486, 593, 600, 782, 818, 962
CviKI_1 RGCY 9 cut(s) 243, 340, 429, 486, 593, 600, 782, 818, 962
CviQI GTAC 4 cut(s) 466, 837, 952, 1168
DdeI CTNAG 5 cut(s) 18, 188, 453, 1013, 1062
DpnI GATC 6 cut(s) 216, 312, 543, 723, 969, 1059
DpnII GATC 6 cut(s) 214, 310, 541, 721, 967, 1057
EaeI YGGCCR 1 cut(s) 780
Eam1104I CTCTTC 1 cut(s) 537
EarI CTCTTC 1 cut(s) 537
Eco24I GRGCYC 2 cut(s) 342, 602
Eco47III AGCGCT 1 cut(s) 193
Eco81I CCTNAGG 1 cut(s) 18
EcoRI GAATTC 1 cut(s) 248
EcoRII CCWGG 2 cut(s) 593, 602
EcoT38I GRGCYC 2 cut(s) 342, 602
FaeI CATG 7 cut(s) 96, 402, 479, 728, 974, 1034, 1117
FaqI GGGAC 2 cut(s) 541, 869
FatI CATG 7 cut(s) 92, 398, 475, 724, 970, 1030, 1113
FauNDI CATATG 3 cut(s) 344, 687, 905
FbaI TGATCA 2 cut(s) 541, 721
FokI GGATG 2 cut(s) 109, 743
FriOI GRGCYC 2 cut(s) 342, 602
FspBI CTAG 2 cut(s) 80, 426
GlaI GCGC 2 cut(s) 193, 354
GsaI CCCAGC 1 cut(s) 966
GsuI CTGGAG 1 cut(s) 335
HaeII RGCGCY 1 cut(s) 195
HaeIII GGCC 1 cut(s) 782
HgaI GACGC 1 cut(s) 179
HhaI GCGC 2 cut(s) 194, 355
Hin1I GRCGYC 1 cut(s) 171
Hin1II CATG 7 cut(s) 96, 402, 479, 728, 974, 1034, 1117
Hin6I GCGC 2 cut(s) 192, 353
HinP1I GCGC 2 cut(s) 192, 353
HindIII AAGCTT 1 cut(s) 816
HphI GGTGA 2 cut(s) 266, 814
Hpy166II GTNNAC 2 cut(s) 583, 942
Hpy188I TCNGA 9 cut(s) 7, 214, 310, 326, 367, 550, 713, 1014, 1088
Hpy188III TCNNGA 7 cut(s) 17, 314, 536, 558, 614, 971, 1041
Hpy8I GTNNAC 2 cut(s) 583, 942
Hpy99I CGWCG 1 cut(s) 173
HpyAV CCTTC 1 cut(s) 130
HpyCH4III ACNGT 2 cut(s) 571, 893
HpyCH4IV ACGT 1 cut(s) 1152
HpyCH4V TGCA 7 cut(s) 87, 223, 232, 272, 643, 685, 823
HpyF10VI GCNNNNNNNGC 1 cut(s) 229
HpyF3I CTNAG 5 cut(s) 18, 188, 453, 1013, 1062
HpySE526I ACGT 1 cut(s) 1152
Hsp92I GRCGYC 1 cut(s) 171
Hsp92II CATG 7 cut(s) 96, 402, 479, 728, 974, 1034, 1117
HspAI GCGC 2 cut(s) 192, 353
Ksp22I TGATCA 2 cut(s) 541, 721
Kzo9I GATC 6 cut(s) 214, 310, 541, 721, 967, 1057
LmnI GCTCC 1 cut(s) 605
LweI GCATC 2 cut(s) 607, 798
MaeI CTAG 2 cut(s) 80, 426
MaeII ACGT 1 cut(s) 1152
MaeIII GTNAC 7 cut(s) 99, 280, 332, 503, 526, 899, 928
MalI GATC 6 cut(s) 216, 312, 543, 723, 969, 1059
MboI GATC 6 cut(s) 214, 310, 541, 721, 967, 1057
MboII GAAGA 2 cut(s) 524, 619
MflI RGATCY 1 cut(s) 1057
MhlI GDGCHC 2 cut(s) 342, 602
MlsI TGGCCA 1 cut(s) 782
MluCI AATT 4 cut(s) 248, 387, 522, 788
MluNI TGGCCA 1 cut(s) 782
MlyI GAGTC 5 cut(s) 146, 523, 604, 851, 1141
MmeI TCCRAC 3 cut(s) 180, 304, 691
Mox20I TGGCCA 1 cut(s) 782
MroXI GAANNNNTTC 2 cut(s) 1008, 1048
MscI TGGCCA 1 cut(s) 782
MseI TTAA 3 cut(s) 386, 704, 873
MslI CAYNNNNRTG 3 cut(s) 501, 729, 1155
Msp20I TGGCCA 1 cut(s) 782
MspR9I CCNGG 2 cut(s) 595, 604
MvaI CCWGG 2 cut(s) 595, 604
MwoI GCNNNNNNNGC 1 cut(s) 229
NdeI CATATG 3 cut(s) 344, 687, 905
NdeII GATC 6 cut(s) 214, 310, 541, 721, 967, 1057
NlaIII CATG 7 cut(s) 96, 402, 479, 728, 974, 1034, 1117
NlaIV GGNNCC 3 cut(s) 395, 601, 1059
NmuCI GTSAC 6 cut(s) 99, 280, 503, 526, 899, 928
NspI RCATGY 1 cut(s) 479
PaeI GCATGC 1 cut(s) 479
PagI TCATGA 1 cut(s) 970
PaqCI CACCTGC 1 cut(s) 442
PdmI GAANNNNTTC 2 cut(s) 1008, 1048
PfeI GAWTC 5 cut(s) 36, 491, 561, 935, 1118
PflFI GACNNNGTC 2 cut(s) 278, 1151
PfoI TCCNGGA 1 cut(s) 602
PleI GAGTC 5 cut(s) 146, 523, 604, 851, 1140
PpsI GAGTC 5 cut(s) 146, 523, 604, 851, 1140
PsiI TTATAA 1 cut(s) 888
Psp6I CCWGG 2 cut(s) 593, 602
PspFI CCCAGC 1 cut(s) 962
PspGI CCWGG 2 cut(s) 593, 602
PspN4I GGNNCC 3 cut(s) 395, 601, 1059
PsuI RGATCY 1 cut(s) 1057
PsyI GACNNNGTC 2 cut(s) 278, 1151
RsaI GTAC 4 cut(s) 467, 838, 953, 1169
RsaNI GTAC 4 cut(s) 466, 837, 952, 1168
RseI CAYNNNNRTG 3 cut(s) 501, 729, 1155
SaqAI TTAA 3 cut(s) 386, 704, 873
Sau3AI GATC 6 cut(s) 214, 310, 541, 721, 967, 1057
SchI GAGTC 5 cut(s) 146, 523, 604, 851, 1141
ScrFI CCNGG 2 cut(s) 595, 604
SduI GDGCHC 2 cut(s) 342, 602
SfaNI GCATC 2 cut(s) 607, 798
SfcI CTRYAG 1 cut(s) 633
SmiMI CAYNNNNRTG 3 cut(s) 501, 729, 1155
SphI GCATGC 1 cut(s) 479
Sse9I AATT 4 cut(s) 248, 387, 522, 788
SsiI CCGC 1 cut(s) 728
SspI AATATT 1 cut(s) 737
SspMI CTAG 2 cut(s) 80, 426
StyD4I CCNGG 2 cut(s) 593, 602
TaaI ACNGT 2 cut(s) 571, 893
TaiI ACGT 1 cut(s) 1155
TaqI TCGA 1 cut(s) 150
TaqII GACCGA 1 cut(s) 1026
TasI AATT 4 cut(s) 248, 387, 522, 788
TatI WGTACW 2 cut(s) 465, 951
TfiI GAWTC 5 cut(s) 36, 491, 561, 935, 1118
Tru1I TTAA 3 cut(s) 386, 704, 873
Tru9I TTAA 3 cut(s) 386, 704, 873
TscAI CASTG 2 cut(s) 230, 508
TseFI GTSAC 6 cut(s) 99, 280, 503, 526, 899, 928
Tsp45I GTSAC 6 cut(s) 99, 280, 503, 526, 899, 928
TspDTI ATGAA 6 cut(s) 112, 747, 751, 759, 929, 1102
TspRI CASTG 2 cut(s) 230, 508
Tth111I GACNNNGTC 2 cut(s) 278, 1151
XapI RAATTY 1 cut(s) 248
XceI RCATGY 1 cut(s) 479
XmnI GAANNNNTTC 2 cut(s) 1008, 1048
XspI CTAG 2 cut(s) 80, 426
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.