pycom03g02220

A Receptor for Ubiquitination Targets

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
OG0000068
Physical Location & Seq
Forward (+)
1707364 .. 1711677
4314 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g02220.5

Sequence Viewer

Length: 2307 bp
ATGGCTGACAATTTGCCTGAGCAAATCATGCAAGATATACTATATAGACTACCGCTGAAATCTTTGATCCTATGCACCTCGGTGTGCAAGCCATGGAACTCCATGATAAAAAATCCGAGCTTTATACGCACCCACCTCAACCGTAAAATCGATCTTAACAACCAGTTTGGCACCCACCTCCTCCTTGTGTGCTGTACTCGTATAGATAAACAGTCTGGATTCTGCCATGGTGACCTTGAGTTATTGGAGCATTGCAATTTGCATTATGATAACCTTGCTTTTGATGAGTACTGCAAACTAGAATTTCCAATTGTTCCCAAGGAAGAAGCGGGCAATAAAGTTTTAAGGGTGGTCGGCGTTTGTAATGGGCTGGTGCTTCTTACGGATTGTATATTTTTTTCAGGTAACACCGTCATGTTATGCAACCCGTCTACGAGAAAGTCAGTGACCCTTCCCAAGCCTCATTATACCTTCAAAGGAGTTCGCGGTTATTATGATTGTATTGGTTTTGGTTTTGACGCTGTGACTACTGACTATAAGGTTGTGAGAATTACCTTTGAACAATGGCCCAATCCGAGTGCTTTTTATGAGGTTTATTCACTCGCTGGAGGCTCATGGAGTGATCCTTGTTCTTTGGATCACGTAAGCGGACTTAAAAGAAATTGCAAACCCGTTTTTGTTAATGGTGCTATTCACTGGAAGGCATACCACCGTTCGACAAATGTTGATTCTAAATATTTCATTTTGGCATTTGACGTGGGCAGCGACTCATTTCGCAGGATAATGACTCCAGAGAATTTCAGAAGCTCATGCGGCGAGGACTTTTATATTTCAGGTTACGGGAAATCTATTGCTCTGTCCAAGCTGTATTATACTAATACTGGGGAGCATTGTGTTGATATATGGTTGATGAAAGAGTGTGGCATGGAAGAGTCATGGACCAAATTGACAACTCTATGTCCAAAAGCATGCAATCTAAAAATCTTGGAATTCATGGATATAGATATTACTATGCCGAATCTTATGTTGAGAGCCTCATCTTACTTGACAAGACCGATGCAGTTTCTTACTGAGAAGAAGAACAGACTCGCTTCCTCAGCTGCGTTTTCGGTCGGCTCATCGAATGCTCCTGGGAATTCAAAGTTTGAACCAATGGCTCACAATTTTCCTGAGGAAATCATACTTGATATCCTGTTTAGATTACCTCCTAAAACATTGATCAGGTGCACCTCAGTGTGCAAGTCATGGAACTCCATGATAAAAAATCCCAGCTTTATACGCACCCACCTCAACCGTACAATCGATCTTAATAACCAGTTTGGCACCCACCTCCGCCTTGTGTACTGTGGTCGTATAGTTAAACGGTCTAGATTCCGCCATGGTGACCTTGAGTTATTGGAGGAGCAATGTAATTTGTATTCTGACAACCTTGCTTTTGATGAGTACTGCAAACTAGAATTTCCAATTGCTCCCAGGGAAGAACTGCGCAATAAAGTTTTAGACGTGGTCAGCGTTTGTAATGGGCTGGTGCTTCTTGCTGATAATAAAGTTTGTTCAGGTAACACCTTCATTTTATGCAACCCGTCTATGAGAAAGTCAGTGACCCTTCCTCAGCCTCATTATACCTTCAAAGGAGATCCCGGTTATTATTATTGTATGGGTTTTGGTTTTGACGCTGTAACCAATGACTACAAGGTTGTGAGAATTACCATTGATCATAGGGAGGATCAGGATCCGAGTACTTTTTATGAGGTTTATTCACTGGCTGGAGGCTCATGGAGTGATCCTTGTTCTTTGGATCACGTATTAGGACTTAACAATATTCGCAAACCCACTGCTATTGTTAATGGTGCTATTCACTGGGATGGATGGCGCCGTTTGACAAATGGTGGTTCTGAATGTTTCATTTTGGCATTTGATGTGGGCAGCGACTCATTTCGCAGTATAGTGACACCAAAGGATTTCAGAAGGTTATACAGTGAGCATTTGTGTATTTCAGGTTACGGGAAATCTATTGCTCTGTCCCATTCTTATTATACTGAAATTATTGAGCCTCGTCTTGATATATGGGTGATGAAAGAGTATGGCCTGGAAGAGTCATGGACCAAGTTGATAACACTATGTCCACCAGGTCCAGAAGGACAATCTTTGTACCAACCATTATGGTTTAGGAAGAGTGGTGATGTAGTCAATATACAAATCTTGGAATTCATGGATATAGATATTACTATGCTGAATCTTATGTTGAGAGCCTCGTCTTACTCGACAAGACTGATGCAGTTTCTTACTGAGGAAAAGAACAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_3

Protein Analysis

769

Amino Acids

87.76

Weight (kDa)

7.2

Isoelectric Point (pI)

39.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1487
AccB1I GGYRCC 3 cut(s) 170, 1322, 1872
AccI GTMKAC 1 cut(s) 431
AccII CGCG 1 cut(s) 486
AciI CCGC 7 cut(s) 53, 329, 486, 648, 813, 1333, 1375
AclWI GGATC 9 cut(s) 61, 617, 645, 1631, 1727, 1734, 1740, 1778, 1806
AcsI RAATTY 6 cut(s) 302, 796, 989, 1135, 1457, 2207
AcyI GRCGYC 1 cut(s) 1873
AfaI GTAC 7 cut(s) 196, 290, 1297, 1343, 1445, 1741, 2153
AgsI TTSAA 5 cut(s) 475, 560, 1140, 1148, 1630
AjiI CACGTC 2 cut(s) 757, 1504
AjnI CCWGG 4 cut(s) 1129, 1472, 2088, 2128
AleI CACNNNNGTG 2 cut(s) 80, 1232
AluBI AGCT 5 cut(s) 120, 807, 865, 1100, 1272
AluI AGCT 5 cut(s) 120, 807, 865, 1100, 1272
Alw21I GWGCWC 1 cut(s) 1229
Alw44I GTGCAC 1 cut(s) 1225
AlwI GGATC 9 cut(s) 61, 617, 645, 1631, 1727, 1734, 1740, 1778, 1806
AoxI GGCC 2 cut(s) 566, 2086
ApaLI GTGCAC 1 cut(s) 1225
ApeKI GCWGC 3 cut(s) 762, 1100, 1926
ApoI RAATTY 6 cut(s) 302, 796, 989, 1135, 1457, 2207
AspLEI GCGC 2 cut(s) 1488, 1875
AspS9I GGNCC 4 cut(s) 567, 939, 2103, 2132
AsuC2I CCSGG 1 cut(s) 1641
AsuHPI GGTGA 4 cut(s) 242, 1394, 2083, 2192
AvaII GGWCC 3 cut(s) 939, 2103, 2132
AxyI CCTNAGG 1 cut(s) 1170
BaeGI GKGCMC 1 cut(s) 1229
BamHI GGATCC 1 cut(s) 1732
BanI GGYRCC 3 cut(s) 170, 1322, 1872
Bbv12I GWGCWC 1 cut(s) 1229
BbvCI CCTCAGC 2 cut(s) 1096, 1611
BbvI GCAGC 3 cut(s) 774, 1087, 1938
BccI CCATC 2 cut(s) 1859, 1863
BceAI ACGGC 1 cut(s) 1860
BciT130I CCWGG 4 cut(s) 1131, 1474, 2090, 2130
BclI TGATCA 2 cut(s) 1218, 1714
BcnI CCSGG 1 cut(s) 1641
BfaI CTAG 3 cut(s) 299, 1368, 1454
BfoI RGCGCY 1 cut(s) 1876
BisI GCNGC 4 cut(s) 763, 814, 1101, 1927
BlsI GCNGC 4 cut(s) 764, 815, 1102, 1928
BmcAI AGTACT 3 cut(s) 290, 1445, 1741
Bme1390I CCNGG 5 cut(s) 1131, 1474, 1641, 2090, 2130
Bme18I GGWCC 3 cut(s) 939, 2103, 2132
BmgBI CACGTC 2 cut(s) 757, 1504
BmgT120I GGNCC 4 cut(s) 567, 939, 2103, 2132
BmiI GGNNCC 4 cut(s) 172, 1324, 1734, 1874
BmrFI CCNGG 5 cut(s) 1131, 1474, 1641, 2090, 2130
BmrI ACTGGG 2 cut(s) 891, 1870
BmsI GCATC 2 cut(s) 1047, 2265
BmuI ACTGGG 2 cut(s) 891, 1870
BpmI CTGGAG 3 cut(s) 627, 774, 1788
Bpu10I CCTNAGC 3 cut(s) 18, 1096, 1611
BpuEI CTTGAG 2 cut(s) 257, 1409
BpuMI CCSGG 1 cut(s) 1641
Bsa29I ATCGAT 2 cut(s) 150, 1302
BsaAI YACGTR 2 cut(s) 643, 1804
BsaBI GATNNNNATC 1 cut(s) 1731
BsaHI GRCGYC 1 cut(s) 1873
BsaJI CCNNGG 8 cut(s) 78, 92, 226, 318, 1130, 1378, 1472, 1473
Bse1I ACTGG 6 cut(s) 163, 701, 886, 1315, 1767, 1865
Bse21I CCTNAGG 1 cut(s) 1170
Bse3DI GCAATG 2 cut(s) 250, 1412
Bse8I GATNNNNATC 1 cut(s) 1731
BseBI CCWGG 4 cut(s) 1131, 1474, 2090, 2130
BseCI ATCGAT 2 cut(s) 150, 1302
BseDI CCNNGG 8 cut(s) 78, 92, 226, 318, 1130, 1378, 1472, 1473
BseGI GGATG 2 cut(s) 1870, 1874
BseJI GATNNNNATC 1 cut(s) 1731
BseMI GCAATG 2 cut(s) 250, 1412
BseMII CTCAG 7 cut(s) 9, 1062, 1110, 1161, 1245, 1625, 2280
BseNI ACTGG 6 cut(s) 163, 701, 886, 1315, 1767, 1865
BseRI GAGGAG 2 cut(s) 170, 1415
BseSI GKGCMC 1 cut(s) 1229
BseXI GCAGC 3 cut(s) 774, 1087, 1938
BseYI CCCAGC 1 cut(s) 1268
Bsh1236I CGCG 1 cut(s) 486
Bsh1285I CGRYCG 1 cut(s) 1113
BshFI GGCC 2 cut(s) 568, 2088
BshNI GGYRCC 3 cut(s) 170, 1322, 1872
BshVI ATCGAT 2 cut(s) 150, 1302
BsiEI CGRYCG 1 cut(s) 1113
BsiHKAI GWGCWC 1 cut(s) 1229
BsiSI CCGG 1 cut(s) 1641
BslFI GGGAC 1 cut(s) 2008
BsmFI GGGAC 1 cut(s) 2008
BsmI GAATGC 1 cut(s) 1129
BsnI GGCC 2 cut(s) 568, 2088
Bsp1286I GDGCHC 1 cut(s) 1229
Bsp19I CCATGG 3 cut(s) 92, 226, 1378
BspACI CCGC 7 cut(s) 53, 329, 486, 648, 813, 1333, 1375
BspANI GGCC 2 cut(s) 568, 2088
BspCNI CTCAG 7 cut(s) 10, 1063, 1109, 1162, 1244, 1624, 2281
BspDI ATCGAT 2 cut(s) 150, 1302
BspFNI CGCG 1 cut(s) 486
BspLI GGNNCC 4 cut(s) 172, 1324, 1734, 1874
BspPI GGATC 9 cut(s) 61, 617, 645, 1631, 1727, 1734, 1740, 1778, 1806
BspT107I GGYRCC 3 cut(s) 170, 1322, 1872
BsrDI GCAATG 2 cut(s) 250, 1412
BsrI ACTGG 6 cut(s) 163, 701, 886, 1315, 1767, 1865
BssECI CCNNGG 8 cut(s) 78, 92, 226, 318, 1130, 1378, 1472, 1473
BssNI GRCGYC 1 cut(s) 1873
BssT1I CCWWGG 4 cut(s) 92, 226, 318, 1378
Bst2UI CCWGG 4 cut(s) 1131, 1474, 2090, 2130
Bst4CI ACNGT 8 cut(s) 143, 213, 412, 713, 1295, 1346, 1365, 1979
Bst6I CTCTTC 3 cut(s) 924, 2088, 2168
BstACI GRCGYC 1 cut(s) 1873
BstAPI GCANNNNNTGC 1 cut(s) 28
BstBAI YACGTR 2 cut(s) 643, 1804
BstC8I GCNNGC 3 cut(s) 89, 331, 970
BstDEI CTNAG 7 cut(s) 18, 1071, 1096, 1170, 1231, 1611, 2289
BstDSI CCRYGG 3 cut(s) 92, 226, 1378
BstEII GGTNACC 2 cut(s) 230, 1382
BstF5I GGATG 2 cut(s) 1870, 1874
BstFNI CGCG 1 cut(s) 486
BstH2I RGCGCY 1 cut(s) 1876
BstHHI GCGC 2 cut(s) 1488, 1875
BstMCI CGRYCG 1 cut(s) 1113
BstMWI GCNNNNNNNGC 5 cut(s) 28, 126, 813, 1097, 1278
BstNI CCWGG 4 cut(s) 1131, 1474, 2090, 2130
BstNSI RCATGY 1 cut(s) 972
BstPI GGTNACC 2 cut(s) 230, 1382
BstSCI CCNGG 5 cut(s) 1129, 1472, 1639, 2088, 2128
BstSLI GKGCMC 1 cut(s) 1229
BstUI CGCG 1 cut(s) 486
BstV1I GCAGC 3 cut(s) 774, 1087, 1938
BstX2I RGATCY 2 cut(s) 1636, 1732
BstYI RGATCY 2 cut(s) 1636, 1732
Bsu15I ATCGAT 2 cut(s) 150, 1302
Bsu36I CCTNAGG 1 cut(s) 1170
BsuRI GGCC 2 cut(s) 568, 2088
BsuTUI ATCGAT 2 cut(s) 150, 1302
BtgI CCRYGG 3 cut(s) 92, 226, 1378
BtrI CACGTC 2 cut(s) 757, 1504
BtsCI GGATG 2 cut(s) 1870, 1874
BtsI GCAGTG 1 cut(s) 1833
BtsIMutI CAGTG 8 cut(s) 450, 694, 1239, 1605, 1760, 1833, 1858, 1984
Cac8I GCNNGC 3 cut(s) 89, 331, 970
CfoI GCGC 2 cut(s) 1488, 1875
Cfr13I GGNCC 4 cut(s) 567, 939, 2103, 2132
ClaI ATCGAT 2 cut(s) 150, 1302
CseI GACGC 2 cut(s) 527, 1682
CsiI ACCWGGT 1 cut(s) 2128
Csp6I GTAC 7 cut(s) 195, 289, 1296, 1342, 1444, 1740, 2152
CspCI CAANNNNNGTGG 2 cut(s) 1822, 1857
CviQI GTAC 7 cut(s) 195, 289, 1296, 1342, 1444, 1740, 2152
DdeI CTNAG 7 cut(s) 18, 1071, 1096, 1170, 1231, 1611, 2289
DinI GGCGCC 1 cut(s) 1874
Eam1104I CTCTTC 3 cut(s) 924, 2088, 2168
EarI CTCTTC 3 cut(s) 924, 2088, 2168
EciI GGCGGA 2 cut(s) 1322, 1364
Eco130I CCWWGG 4 cut(s) 92, 226, 318, 1378
Eco32I GATATC 1 cut(s) 1189
Eco47I GGWCC 3 cut(s) 939, 2103, 2132
Eco81I CCTNAGG 1 cut(s) 1170
Eco91I GGTNACC 2 cut(s) 230, 1382
EcoO65I GGTNACC 2 cut(s) 230, 1382
EcoRI GAATTC 3 cut(s) 989, 1135, 2207
EcoRII CCWGG 4 cut(s) 1129, 1472, 2088, 2128
EcoRV GATATC 1 cut(s) 1189
EcoT14I CCWWGG 4 cut(s) 92, 226, 318, 1378
EgeI GGCGCC 1 cut(s) 1874
EheI GGCGCC 1 cut(s) 1874
ErhI CCWWGG 4 cut(s) 92, 226, 318, 1378
FaqI GGGAC 1 cut(s) 2008
FauI CCCGC 1 cut(s) 322
FbaI TGATCA 2 cut(s) 1218, 1714
FblI GTMKAC 1 cut(s) 431
Fnu4HI GCNGC 4 cut(s) 763, 814, 1101, 1927
FokI GGATG 2 cut(s) 1877, 1881
Fsp4HI GCNGC 4 cut(s) 763, 814, 1101, 1927
FspBI CTAG 3 cut(s) 299, 1368, 1454
FspI TGCGCA 1 cut(s) 1487
GlaI GCGC 2 cut(s) 1487, 1874
GluI GCNGC 4 cut(s) 763, 814, 1101, 1927
GsaI CCCAGC 1 cut(s) 1272
GsuI CTGGAG 3 cut(s) 627, 774, 1788
HaeII RGCGCY 1 cut(s) 1876
HaeIII GGCC 2 cut(s) 568, 2088
HapII CCGG 1 cut(s) 1641
HgaI GACGC 2 cut(s) 527, 1682
HhaI GCGC 2 cut(s) 1488, 1875
Hin1I GRCGYC 1 cut(s) 1873
Hin6I GCGC 2 cut(s) 1486, 1873
HinP1I GCGC 2 cut(s) 1486, 1873
HpaII CCGG 1 cut(s) 1641
HphI GGTGA 4 cut(s) 242, 1394, 2083, 2192
Hpy166II GTNNAC 4 cut(s) 432, 1227, 1342, 2126
Hpy188I TCNGA 7 cut(s) 117, 576, 803, 1423, 1737, 1897, 1967
Hpy188III TCNNGA 7 cut(s) 216, 791, 1169, 1368, 1730, 2060, 2135
Hpy8I GTNNAC 4 cut(s) 432, 1227, 1342, 2126
HpyAV CCTTC 8 cut(s) 461, 481, 694, 1576, 1616, 1636, 1962, 2132
HpyCH4III ACNGT 8 cut(s) 143, 213, 412, 713, 1295, 1346, 1365, 1979
HpyCH4IV ACGT 4 cut(s) 642, 756, 1503, 1803
HpyF10VI GCNNNNNNNGC 5 cut(s) 28, 126, 813, 1097, 1278
HpyF3I CTNAG 7 cut(s) 18, 1071, 1096, 1170, 1231, 1611, 2289
HpySE526I ACGT 4 cut(s) 642, 756, 1503, 1803
Hsp92I GRCGYC 1 cut(s) 1873
HspAI GCGC 2 cut(s) 1486, 1873
KasI GGCGCC 1 cut(s) 1872
Ksp22I TGATCA 2 cut(s) 1218, 1714
LmnI GCTCC 5 cut(s) 247, 886, 1132, 1402, 1474
Lsp1109I GCAGC 3 cut(s) 774, 1087, 1938
LweI GCATC 2 cut(s) 1047, 2265
MabI ACCWGGT 1 cut(s) 2128
MaeI CTAG 3 cut(s) 299, 1368, 1454
MaeII ACGT 4 cut(s) 642, 756, 1503, 1803
MboII GAAGA 7 cut(s) 335, 941, 1087, 1090, 1490, 2105, 2185
MfeI CAATTG 2 cut(s) 309, 1464
MflI RGATCY 2 cut(s) 1636, 1732
MhlI GDGCHC 1 cut(s) 1229
Mly113I GGCGCC 1 cut(s) 1873
MlyI GAGTC 6 cut(s) 761, 781, 941, 1080, 1925, 2105
MseI TTAA 8 cut(s) 156, 344, 654, 681, 1308, 1359, 1815, 1845
MslI CAYNNNNRTG 4 cut(s) 80, 413, 1232, 1863
MspA1I CMGCKG 2 cut(s) 55, 1100
MspI CCGG 1 cut(s) 1641
MspR9I CCNGG 5 cut(s) 1131, 1474, 1641, 2090, 2130
MunI CAATTG 2 cut(s) 309, 1464
Mva1269I GAATGC 1 cut(s) 1129
MvaI CCWGG 4 cut(s) 1131, 1474, 2090, 2130
MvnI CGCG 1 cut(s) 486
MwoI GCNNNNNNNGC 5 cut(s) 28, 126, 813, 1097, 1278
NarI GGCGCC 1 cut(s) 1873
NciI CCSGG 1 cut(s) 1641
NcoI CCATGG 3 cut(s) 92, 226, 1378
NlaIV GGNNCC 4 cut(s) 172, 1324, 1734, 1874
NmuCI GTSAC 6 cut(s) 230, 445, 523, 1382, 1600, 1948
NsbI TGCGCA 1 cut(s) 1487
NspI RCATGY 1 cut(s) 972
OliI CACNNNNGTG 2 cut(s) 80, 1232
PaeI GCATGC 1 cut(s) 972
PasI CCCWGGG 1 cut(s) 1473
PcsI WCGNNNNNNNCGW 3 cut(s) 762, 1509, 2261
PctI GAATGC 1 cut(s) 1129
PfeI GAWTC 5 cut(s) 219, 728, 1018, 1371, 2236
PflFI GACNNNGTC 1 cut(s) 1505
PkrI GCNGC 4 cut(s) 764, 815, 1102, 1928
PleI GAGTC 6 cut(s) 761, 781, 940, 1080, 1925, 2104
PluTI GGCGCC 1 cut(s) 1876
PpsI GAGTC 6 cut(s) 761, 781, 940, 1080, 1925, 2104
Ppu21I YACGTR 2 cut(s) 643, 1804
Psp6I CCWGG 4 cut(s) 1129, 1472, 2088, 2128
PspEI GGTNACC 2 cut(s) 230, 1382
PspFI CCCAGC 1 cut(s) 1268
PspGI CCWGG 4 cut(s) 1129, 1472, 2088, 2128
PspN4I GGNNCC 4 cut(s) 172, 1324, 1734, 1874
PspPI GGNCC 4 cut(s) 567, 939, 2103, 2132
PsuI RGATCY 2 cut(s) 1636, 1732
PsyI GACNNNGTC 1 cut(s) 1505
PvuII CAGCTG 1 cut(s) 1100
RsaI GTAC 7 cut(s) 196, 290, 1297, 1343, 1445, 1741, 2153
RsaNI GTAC 7 cut(s) 195, 289, 1296, 1342, 1444, 1740, 2152
RseI CAYNNNNRTG 4 cut(s) 80, 413, 1232, 1863
SaqAI TTAA 8 cut(s) 156, 344, 654, 681, 1308, 1359, 1815, 1845
SatI GCNGC 4 cut(s) 763, 814, 1101, 1927
Sau96I GGNCC 4 cut(s) 567, 939, 2103, 2132
ScaI AGTACT 3 cut(s) 290, 1445, 1741
SchI GAGTC 6 cut(s) 761, 781, 941, 1080, 1925, 2105
ScrFI CCNGG 5 cut(s) 1131, 1474, 1641, 2090, 2130
SduI GDGCHC 1 cut(s) 1229
SexAI ACCWGGT 1 cut(s) 2128
SfaNI GCATC 2 cut(s) 1047, 2265
SfoI GGCGCC 1 cut(s) 1874
SinI GGWCC 3 cut(s) 939, 2103, 2132
SmiMI CAYNNNNRTG 4 cut(s) 80, 413, 1232, 1863
SmlI CTYRAG 2 cut(s) 236, 1388
SmoI CTYRAG 2 cut(s) 236, 1388
SphI GCATGC 1 cut(s) 972
SsiI CCGC 7 cut(s) 53, 329, 486, 648, 813, 1333, 1375
SspDI GGCGCC 1 cut(s) 1872
SspI AATATT 2 cut(s) 737, 1822
SspMI CTAG 3 cut(s) 299, 1368, 1454
StyD4I CCNGG 5 cut(s) 1129, 1472, 1639, 2088, 2128
StyI CCWWGG 4 cut(s) 92, 226, 318, 1378
TaaI ACNGT 8 cut(s) 143, 213, 412, 713, 1295, 1346, 1365, 1979
TaiI ACGT 4 cut(s) 645, 759, 1506, 1806
TaqI TCGA 5 cut(s) 150, 716, 1121, 1302, 2264
TaqII GACCGA 2 cut(s) 1069, 1099
TatI WGTACW 5 cut(s) 194, 288, 1341, 1443, 1739
TauI GCSGC 1 cut(s) 816
TfiI GAWTC 5 cut(s) 219, 728, 1018, 1371, 2236
Tru1I TTAA 8 cut(s) 156, 344, 654, 681, 1308, 1359, 1815, 1845
Tru9I TTAA 8 cut(s) 156, 344, 654, 681, 1308, 1359, 1815, 1845
TscAI CASTG 8 cut(s) 450, 701, 1239, 1605, 1767, 1840, 1865, 1984
TseFI GTSAC 6 cut(s) 230, 445, 523, 1382, 1600, 1948
TseI GCWGC 3 cut(s) 762, 1100, 1926
Tsp45I GTSAC 6 cut(s) 230, 445, 523, 1382, 1600, 1948
TspDTI ATGAA 7 cut(s) 730, 926, 982, 1558, 1894, 2090, 2200
TspGWI ACGGA 1 cut(s) 398
TspRI CASTG 8 cut(s) 450, 701, 1239, 1605, 1767, 1840, 1865, 1984
Tth111I GACNNNGTC 1 cut(s) 1505
VneI GTGCAC 1 cut(s) 1225
VpaK11BI GGWCC 3 cut(s) 939, 2103, 2132
XapI RAATTY 6 cut(s) 302, 796, 989, 1135, 1457, 2207
XbaI TCTAGA 1 cut(s) 1367
XceI RCATGY 1 cut(s) 972
XmiI GTMKAC 1 cut(s) 431
XspI CTAG 3 cut(s) 299, 1368, 1454
ZrmI AGTACT 3 cut(s) 290, 1445, 1741
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.