FvH4_3g18860

F-box kelch-repeat protein At3g23880-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000068
Physical Location & Seq
Forward (+)
12116780 .. 12119766
2987 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g18860.t6

Sequence Viewer

Length: 1266 bp
ATGTGGGACGATTGCTATGAAGGTAAGTCTCTCTTGAGCCCTGCATCCACCTCTAAGCTTGGTCTGTCCATTTCTGATGTCATAACAGATTGGCTTAAATCCCTCCCTGAAGAACTCATACCCGACATCCTAATCAGACTACCCATCAAATCCCTCATTAGATTCACCTCTGTCTGTAAACCTTGGATGTCCACCATCAAAGACCCAACATTTGTTCGCAATTTCAGTGACCAAAATGCCACCCACCTCATTCTCCTCCACGTTGTTCAGAGTGAAGGCTACTTTAACCCTGAAGGAACAATTCAAATCATTGGGTTCCAAGAAGACTCTTACTCTCTGCTTCATGATGACACTGCTGTTTCTGAGTATTGCAAGGTTGAGTTTCCAATTGCTCTTAATGAAGAATTGATCAATCCGTGTTTTCGTGTGGTGGGTACTTGTAATGGGTTGGTTTTGCTTGCTGATGATTTGGGGGATTATGGTTACACCTTTGTTTTATGGAATCCTAGTATTAGAAAGTATGTGACCCTTCCCAAGCCCAGTGTGTGGTTTTCGACGCACGGTAGGTATGATGCTTCACTTGGTCTGGGTTATGATGCTATTAGTAATGACTATAAGGTTGTGAGACTTACCACCCTTTTCGACCAATCTGATGATTGCCTGACTAAAGCTCAGGTATATTCACTCGGCGAGGGCTCTTGGAAGATGCTCCTTCCTGTTCCTGTTCCTCAGTGTTTTGTGTCTGATTCCTTGGTCCATGTTTTTGTCAACGGGTCACTTCACTGGATGGCTATCCAATGGACAGAGATATATATGAACTATTTCATTTTGACATTTGATGTGGCTGGTGAATCATTTGGAGAGAGATTGTTGCCCAAGAGCTTCAAATTGGATGAGCCACTAGACTTGAGGTTGTCTGTTTCTGGAGATAGAAAATCGATTGCTCTGTTTGTGAGGTGTGAGAATTATGAAGGTGATTCTTTTCTTGATGTTTGGGTAATGAAAGAGTACAGTGAGGAGAAATCATGGACAAAATTGGTTGTTCTCAGTCCACAAGGTCCGGAAAGAAGTCTACCCAAGGCATTTTGTTTCAAGAGGAGTGGTGAAGTGATATTGGAACTAGACGGTAGCCATGAGTTAATTTCTTTTGATGTTGTGAGCAAAGAGTTTAAACATCTAGGGATATCTGGAGGGCCAATTTGCTCTGTTGACTCTTTTGAAGAGAGCATTGTCTTGCTCGACAGGAATGATGCAGCTTCATACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

422

Amino Acids

47.54

Weight (kDa)

4.74

Isoelectric Point (pI)

35.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 33 - 72 8.9e-08 F-box domain
F-box-like PF12937 33 - 74 4.8e-06 F-box-like
FBA_3 PF08268 136 - 373 3.8e-21 F-box associated beta propeller domain
FBA_1 PF07734 141 - 352 2.4e-27 F-box associated beta propeller domain
b-prop_At3g26010-like PF24750 143 - 347 1.6e-07 F-box protein At3g26010-like, beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 546
AccI GTMKAC 1 cut(s) 1072
AccIII TCCGGA 1 cut(s) 1060
AcuI CTGAAG 2 cut(s) 129, 312
AfaI GTAC 2 cut(s) 436, 1010
AfiI CCNNNNNNNGG 1 cut(s) 546
AgsI TTSAA 4 cut(s) 305, 886, 1093, 1220
AluBI AGCT 4 cut(s) 58, 671, 882, 1256
AluI AGCT 4 cut(s) 58, 671, 882, 1256
Alw26I GTCTC 2 cut(s) 33, 619
Aor13HI TCCGGA 1 cut(s) 1060
AoxI GGCC 1 cut(s) 1193
ApeKI GCWGC 1 cut(s) 1253
ArsI GACNNNNNNTTYG 2 cut(s) 194, 226
Asp700I GAANNNNTTC 1 cut(s) 821
AspS9I GGNCC 3 cut(s) 754, 1058, 1193
AsuHPI GGTGA 4 cut(s) 157, 860, 986, 1115
AvaII GGWCC 2 cut(s) 754, 1058
BanII GRGCYC 2 cut(s) 41, 698
BarI GAAGNNNNNNTAC 2 cut(s) 102, 134
BbsI GAAGAC 1 cut(s) 330
BccI CCATC 3 cut(s) 152, 203, 781
BclI TGATCA 1 cut(s) 408
BcoDI GTCTC 2 cut(s) 33, 619
BfaI CTAG 4 cut(s) 507, 902, 1121, 1178
BisI GCNGC 1 cut(s) 1254
BlsI GCNGC 1 cut(s) 1255
Bme18I GGWCC 2 cut(s) 754, 1058
BmgT120I GGNCC 3 cut(s) 754, 1058, 1193
BmiI GGNNCC 1 cut(s) 317
BmrI ACTGGG 1 cut(s) 534
BmsI GCATC 5 cut(s) 53, 562, 586, 696, 1240
BmuI ACTGGG 1 cut(s) 534
BpiI GAAGAC 1 cut(s) 330
BpmI CTGGAG 2 cut(s) 945, 1209
Bpu10I CCTNAGC 1 cut(s) 672
BpuEI CTTGAG 2 cut(s) 55, 928
Bsa29I ATCGAT 1 cut(s) 938
BsaBI GATNNNNATC 1 cut(s) 791
BsaJI CCNNGG 3 cut(s) 182, 750, 1077
BsaWI WCCGGW 1 cut(s) 1060
Bsc4I CCNNNNNNNGG 1 cut(s) 546
Bse1I ACTGG 2 cut(s) 540, 788
Bse8I GATNNNNATC 1 cut(s) 791
BseAI TCCGGA 1 cut(s) 1060
BseCI ATCGAT 1 cut(s) 938
BseDI CCNNGG 3 cut(s) 182, 750, 1077
BseGI GGATG 5 cut(s) 44, 126, 192, 792, 898
BseJI GATNNNNATC 1 cut(s) 791
BseLI CCNNNNNNNGG 1 cut(s) 546
BseMII CTCAG 4 cut(s) 354, 686, 743, 1060
BseNI ACTGG 2 cut(s) 540, 788
BseRI GAGGAG 3 cut(s) 245, 1031, 1111
BshFI GGCC 1 cut(s) 1195
BshVI ATCGAT 1 cut(s) 938
BsiSI CCGG 1 cut(s) 1061
BslFI GGGAC 1 cut(s) 20
BslI CCNNNNNNNGG 1 cut(s) 546
BsmAI GTCTC 2 cut(s) 33, 619
BsmFI GGGAC 1 cut(s) 20
BsnI GGCC 1 cut(s) 1195
Bsp1286I GDGCHC 2 cut(s) 41, 698
Bsp13I TCCGGA 1 cut(s) 1060
Bsp143I GATC 1 cut(s) 408
BspANI GGCC 1 cut(s) 1195
BspCNI CTCAG 4 cut(s) 355, 685, 742, 1059
BspDI ATCGAT 1 cut(s) 938
BspEI TCCGGA 1 cut(s) 1060
BspHI TCATGA 1 cut(s) 343
BspLI GGNNCC 1 cut(s) 317
BsrI ACTGG 2 cut(s) 540, 788
BssECI CCNNGG 3 cut(s) 182, 750, 1077
BssMI GATC 1 cut(s) 408
BssT1I CCWWGG 3 cut(s) 182, 750, 1077
Bst4CI ACNGT 3 cut(s) 563, 1013, 1127
Bst6I CTCTTC 1 cut(s) 1215
BstC8I GCNNGC 1 cut(s) 459
BstDEI CTNAG 5 cut(s) 54, 363, 672, 729, 1046
BstF5I GGATG 5 cut(s) 44, 126, 192, 792, 898
BstKTI GATC 1 cut(s) 411
BstMAI GTCTC 2 cut(s) 33, 619
BstMBI GATC 1 cut(s) 408
BstV2I GAAGAC 1 cut(s) 330
Bsu15I ATCGAT 1 cut(s) 938
BsuRI GGCC 1 cut(s) 1195
BsuTUI ATCGAT 1 cut(s) 938
BtsCI GGATG 5 cut(s) 44, 126, 192, 792, 898
BtsI GCAGTG 1 cut(s) 351
BtsIMutI CAGTG 6 cut(s) 232, 351, 547, 737, 781, 1018
Cac8I GCNNGC 1 cut(s) 459
CciI TCATGA 1 cut(s) 343
Cfr13I GGNCC 3 cut(s) 754, 1058, 1193
ClaI ATCGAT 1 cut(s) 938
CseI GACGC 1 cut(s) 565
Csp6I GTAC 2 cut(s) 435, 1009
CspCI CAANNNNNGTGG 4 cut(s) 888, 923, 1081, 1116
CviAII CATG 4 cut(s) 344, 758, 1026, 1133
CviQI GTAC 2 cut(s) 435, 1009
DdeI CTNAG 5 cut(s) 54, 363, 672, 729, 1046
DpnI GATC 1 cut(s) 410
DpnII GATC 1 cut(s) 408
DraI TTTAAA 1 cut(s) 1171
Eam1104I CTCTTC 1 cut(s) 1215
EarI CTCTTC 1 cut(s) 1215
Eco130I CCWWGG 3 cut(s) 182, 750, 1077
Eco24I GRGCYC 2 cut(s) 41, 698
Eco32I GATATC 1 cut(s) 1185
Eco47I GGWCC 2 cut(s) 754, 1058
Eco57I CTGAAG 2 cut(s) 129, 312
EcoRV GATATC 1 cut(s) 1185
EcoT14I CCWWGG 3 cut(s) 182, 750, 1077
EcoT38I GRGCYC 2 cut(s) 41, 698
ErhI CCWWGG 3 cut(s) 182, 750, 1077
FaeI CATG 4 cut(s) 347, 761, 1029, 1136
FalI AAGNNNNNCTT 2 cut(s) 17, 49
FaqI GGGAC 1 cut(s) 20
FatI CATG 4 cut(s) 343, 757, 1025, 1132
FbaI TGATCA 1 cut(s) 408
FblI GTMKAC 1 cut(s) 1072
Fnu4HI GCNGC 1 cut(s) 1254
FokI GGATG 5 cut(s) 31, 113, 199, 799, 905
FriOI GRGCYC 2 cut(s) 41, 698
Fsp4HI GCNGC 1 cut(s) 1254
FspBI CTAG 4 cut(s) 507, 902, 1121, 1178
GluI GCNGC 1 cut(s) 1254
GsuI CTGGAG 2 cut(s) 945, 1209
HaeIII GGCC 1 cut(s) 1195
HapII CCGG 1 cut(s) 1061
HgaI GACGC 1 cut(s) 565
Hin1II CATG 4 cut(s) 347, 761, 1029, 1136
HincII GTYRAC 2 cut(s) 769, 1210
HindII GTYRAC 2 cut(s) 769, 1210
HindIII AAGCTT 1 cut(s) 56
HinfI GANTC 7 cut(s) 162, 326, 502, 746, 851, 977, 1211
HpaII CCGG 1 cut(s) 1061
HphI GGTGA 4 cut(s) 157, 860, 986, 1115
Hpy166II GTNNAC 6 cut(s) 179, 192, 769, 1052, 1073, 1210
Hpy188I TCNGA 6 cut(s) 76, 137, 270, 364, 652, 745
Hpy188III TCNNGA 7 cut(s) 34, 344, 924, 986, 1061, 1093, 1188
Hpy8I GTNNAC 6 cut(s) 179, 192, 769, 1052, 1073, 1210
Hpy99I CGWCG 1 cut(s) 559
HpyAV CCTTC 6 cut(s) 14, 269, 287, 539, 722, 965
HpyCH4III ACNGT 3 cut(s) 563, 1013, 1127
HpyCH4IV ACGT 1 cut(s) 261
HpyCH4V TGCA 3 cut(s) 44, 372, 1253
HpyF3I CTNAG 5 cut(s) 54, 363, 672, 729, 1046
HpySE526I ACGT 1 cut(s) 261
Hsp92II CATG 4 cut(s) 347, 761, 1029, 1136
Kpn2I TCCGGA 1 cut(s) 1060
Ksp22I TGATCA 1 cut(s) 408
Kzo9I GATC 1 cut(s) 408
LmnI GCTCC 1 cut(s) 714
LweI GCATC 5 cut(s) 53, 562, 586, 696, 1240
MaeI CTAG 4 cut(s) 507, 902, 1121, 1178
MaeII ACGT 1 cut(s) 261
MaeIII GTNAC 4 cut(s) 227, 482, 523, 774
MalI GATC 1 cut(s) 410
MboI GATC 1 cut(s) 408
MboII GAAGA 5 cut(s) 122, 335, 413, 715, 1232
MfeI CAATTG 1 cut(s) 387
MhlI GDGCHC 2 cut(s) 41, 698
MluCI AATT 9 cut(s) 220, 300, 387, 404, 887, 964, 1034, 1140, 1197
MlyI GAGTC 2 cut(s) 320, 1205
MroI TCCGGA 1 cut(s) 1060
MroXI GAANNNNTTC 1 cut(s) 821
MseI TTAA 5 cut(s) 96, 285, 396, 1139, 1170
MspI CCGG 1 cut(s) 1061
MssI GTTTAAAC 1 cut(s) 1171
MunI CAATTG 1 cut(s) 387
NdeII GATC 1 cut(s) 408
NlaIII CATG 4 cut(s) 347, 761, 1029, 1136
NlaIV GGNNCC 1 cut(s) 317
NmeAIII GCCGAG 1 cut(s) 666
NmuCI GTSAC 3 cut(s) 227, 523, 774
PagI TCATGA 1 cut(s) 343
PdmI GAANNNNTTC 1 cut(s) 821
PfeI GAWTC 5 cut(s) 162, 502, 746, 851, 977
PflMI CCANNNNNTGG 1 cut(s) 546
PkrI GCNGC 1 cut(s) 1255
PleI GAGTC 2 cut(s) 320, 1205
PmeI GTTTAAAC 1 cut(s) 1171
PpsI GAGTC 2 cut(s) 320, 1205
PspN4I GGNNCC 1 cut(s) 317
PspPI GGNCC 3 cut(s) 754, 1058, 1193
RsaI GTAC 2 cut(s) 436, 1010
RsaNI GTAC 2 cut(s) 435, 1009
SaqAI TTAA 5 cut(s) 96, 285, 396, 1139, 1170
SatI GCNGC 1 cut(s) 1254
Sau3AI GATC 1 cut(s) 408
Sau96I GGNCC 3 cut(s) 754, 1058, 1193
SchI GAGTC 2 cut(s) 320, 1205
SduI GDGCHC 2 cut(s) 41, 698
SfaNI GCATC 5 cut(s) 53, 562, 586, 696, 1240
SinI GGWCC 2 cut(s) 754, 1058
SmlI CTYRAG 2 cut(s) 34, 907
SmoI CTYRAG 2 cut(s) 34, 907
Sse9I AATT 9 cut(s) 220, 300, 387, 404, 887, 964, 1034, 1140, 1197
SspMI CTAG 4 cut(s) 507, 902, 1121, 1178
StyI CCWWGG 3 cut(s) 182, 750, 1077
TaaI ACNGT 3 cut(s) 563, 1013, 1127
TaiI ACGT 1 cut(s) 264
TaqI TCGA 4 cut(s) 554, 642, 938, 1239
TasI AATT 9 cut(s) 220, 300, 387, 404, 887, 964, 1034, 1140, 1197
TatI WGTACW 1 cut(s) 1008
TfiI GAWTC 5 cut(s) 162, 502, 746, 851, 977
Tru1I TTAA 5 cut(s) 96, 285, 396, 1139, 1170
Tru9I TTAA 5 cut(s) 96, 285, 396, 1139, 1170
TscAI CASTG 6 cut(s) 232, 358, 547, 737, 788, 1018
TseFI GTSAC 3 cut(s) 227, 523, 774
TseI GCWGC 1 cut(s) 1253
Tsp45I GTSAC 3 cut(s) 227, 523, 774
TspDTI ATGAA 8 cut(s) 33, 332, 414, 814, 830, 984, 1016, 1248
TspGWI ACGGA 1 cut(s) 405
TspRI CASTG 6 cut(s) 232, 358, 547, 737, 788, 1018
Van91I CCANNNNNTGG 1 cut(s) 546
VpaK11BI GGWCC 2 cut(s) 754, 1058
XmiI GTMKAC 1 cut(s) 1072
XmnI GAANNNNTTC 1 cut(s) 821
XspI CTAG 4 cut(s) 507, 902, 1121, 1178
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.