Rorug01G0209700

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000068
Physical Location & Seq
Reverse (-)
29697202 .. 29700343
3142 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0209700.1

Sequence Viewer

Length: 3045 bp
ATGCATGCTCTTCTTCCTTTTCACTCATGCCGTGGTTTAAGACTTCAAGGAAATGAGACAGATAGACTGGCCTTACTTGAAATCAAGGCTAGGATAACTGTTGACCCTTTTGGAGTCTTTGATTCCTGGAACGAAACCAACCACTTTTGCAAGTGGCATGGTGTTTTTTGTGGTCATCGTCACCAGAGGGTCACGATGTTAGACCTGCAGTCCTTGAATCTTGCAGGCTCTATAGCACCACATGTTGGAAATTTGAGTTTCCTGAGGGTCATTTATCTCCAAAACAACAGCTTCAGCCATCAAATTCCTACCGAAATTGGTCATCTCCGCAGACTTCAGGGTTTGCACTTGGAGAATAATTCACTCAGCGGTGAAATTCCCTCTAACTTGTCAGCTTGCTCTCAACTCATCATAGTTTCTCTTGGTTTCAATTTTCTGGTAGGAACAATTCCGGAGGAGCTTGGCACTTTGCTGAAGCTAAGAACAATTGCAATTTACCGCAACAACCTATCAGGAAGTCTCCCTCGGTCTTTTGGCAACTTATCATCTCTTGAAGTGCTTTCAGCGTCCACTAATAACTTGAATGGGAGTATTCCAGATATTTTTGGCCAACTGACAAATCTTACAACTCTTATATTGGATCTGAATAGCTTCTCCGGTATGCTTCCTCCCTCAGTTTTCAATCTCTCTTCTCTAATATTCTTCTCTGTGGTAGTAAACAGAGTCCATGGGTCTTTGCCCTCAAACTTAGGTGTGGTCTTTCCAAGGCTTGAGTACTTTGATATTGCTCGTAACCAATTTCATGGACCTATTCCTGTTTCATTGTCTAATGCCTCAAACCTAGCTCACTTTGGAATTTCAGGAAACCAACTACATGGAGAAGTCCCTTCTTTGGAAAATTTACATAGGCTTGAGAGATTAATTCTGGGAATAAACCATCTTGGAAGCGGGAAAATTGGTGACTTGAGCTTTATATGCGATTTGGTTAATGCCACTCGTTTAGAGTATCTGGAAATTAATTCAAACTACTTTGGGGGCATGTTACCTCCATGCACATCTAACTTATCTTCTTCTCTTGTATCACTCTTTCTATCTTGGAATAAGATTTTTGGAAGAATACCTAATGGGATTGGGAATCTGCATAACCTGGAGAAGCTTCGGCTGTCTTTTAACCAATTTTCAGGTCACATTCCCCCGGATCTGGGAAAGCTTAACAATCTATATGAATTAGACTTGGCTGTGAACTTACTATCCGGGAATGTACCATCCTCTTTTGGAAATTTGAGTGGATTAATTAGACTATATCTATCTTACAACAACCTTCAAGGAAATATCCCTTCCAGTTTAGGTCAGTGTCTCAACTTGATTCTCTTATCTCTTGCTTATAACAATTTAAGTGGTATCATTCCTGGAGGAATGATTTGGCCATCATATTCATATGTTGAATGGGATCTAGGGGACAATAACTTTTCTGGCTTCCTTCCTGAGGAAGTAGGAAATTTAATAAATCTGGGGACTCTAGATGTTTCTGGAAATATGTTATCTGGTGAAATTCCGACTAGGCTAAGTGGTTGTATAGCGTTAGAGTATCTATACCTGCAGAGGAACTTCTTTCAAGGGACAATTCCGGCATCTTTGGGTTCACTAAGAGGTATTAAATATTTATATCTTTCTCACAACAACTTGTCTGGAGCGATTCCAGAATTCTTGGAGGGCCTCGAAGTTCTGCAGTATCTGAATCTATCTTATAACCATTTGGAGGGCATAGTACCAGCCAAAGGAATTTTCATGAATGCAACTGCCACATCAGTCAAAGGAAATAGTGGACTTTGTGGGGGCATACCTGCATTTCAATTGCCAAAATGCAGATTTAGACATACCAAAAGGCCAAGATTGAGCCTCACCTTGAGACTAACAATCTCCCTTGTTTGTGGGTTTCTTGGAGTTACCTTTACACTGTTGTTTTTGTACTTCTGTTGCATGCAGAGGGAAAGAACAAGGCAAAGTATTTCAAGTAATTCAGAAAATTTTCTCAAGGTGTCCTACCATAGTCTTGTAAAAGCTACTGATGGATTCTCCTCAGCCAACTTGATCGGCATGGGCAGTTTTGGATCAGTTTATAAAGGAGTGCTCGAGCAAGGTGACACAACTATTGCTATCAAGGTACTTAACCTTGTTCATCCGGGAGCTTCCAAAAGTTTCACTGCTGAGTGTGAGGCCTTGAAAAATATCAGACACCGTAATCTTGTGAAGGTACTCTCTGCATGTTCGGGTACTGATTATCGTGGCTGTGATTTCAAGGCCTTAATTTATGAGTTCATGGTTAATGGGAGCTTAGAGGAATGGTTGCATCCTCAGGAAATTAATGGCGTGAAAGATGAGAGGCAGAGGATCCTAAAGTTTTCTCAGAGGTTGAACATTGCCATTGACATTGCTATGGCATTGGAATATCTCCATTATCATTGTGAGACCCCGATAGTTCACTGCGATCTCAAGCCAAGTAATGTTCTTCTTGATGATGATATGGTTGGCCATGTGGGTGACTTTGGGTTGGTAAAATTCCTTCACAGAGCTTCTGACACTGTTTCTGGAGATCAATCAAGCTCCTTGGGAGTAAGAGGAACAATTGGTTATACTCCTCCAGAATATGGCATGGGACATGAAGTTTGGACACAAGGCGACGTGTACAGCTACGGCATCCTTCTGTTGCAAATGTTTACTGGAAGTAGACCAACCGATGACTTGTTTCAAGGAACTTCAAATATTCATAACTTTGTGAAGGCGGCTCTGCCTGCACAAGTTCTAGAGATTGTGGATCCTGTTCTTGTTCAAGAAAAAATGGAGGGAGAGATGAGAAGAAACAATAATCTTAATGATGATAGCACAAGGGTTTCCAACAAAGTTCAAGAATGCTTGGCTACAATTTTAGAAATTGGTGTTGCTTGCTCCACAGAACTGCCTACAGCGCGGTTAGACATTAGTGATGTTGTTGCTGAGATGTGTCGAATAAGAAATAAATATCTAGCAAATAGAACTTGTGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

1014

Amino Acids

111.84

Weight (kDa)

6.48

Isoelectric Point (pI)

32.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 19 - 57 1.3e-09 Leucine rich repeat N-terminal domain
LRR_14 PF23598 64 - 164 9.2e-08 Leucine-rich repeat region
LRR_14 PF23598 152 - 238 8.5e-07 Leucine-rich repeat region
LRR_8 PF13855 528 - 586 6.8e-11 Leucine rich repeat
Pkinase PF00069 694 - 924 7.4e-35 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 696 - 917 2.4e-35 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1386, 1749, 2121
Acc36I ACCTGC 3 cut(s) 213, 1605, 1852
AccB7I CCANNNNNTGG 2 cut(s) 245, 2648
AccI GTMKAC 1 cut(s) 2728
AccII CGCG 1 cut(s) 2968
AccIII TCCGGA 1 cut(s) 451
AciI CCGC 6 cut(s) 328, 369, 499, 948, 2783, 2968
AclWI GGATC 8 cut(s) 648, 1206, 1458, 2119, 2386, 2399, 2810, 2823
AcoI YGGCCR 3 cut(s) 607, 1424, 2530
AcuI CTGAAG 3 cut(s) 277, 320, 494
AfaI GTAC 8 cut(s) 776, 1263, 1770, 1970, 2166, 2256, 2275, 2687
AfiI CCNNNNNNNGG 8 cut(s) 245, 892, 1201, 1202, 1486, 1759, 1778, 2648
AflIII ACRYGT 2 cut(s) 241, 2682
AhdI GACNNNNNGTC 1 cut(s) 208
AjiI CACGTC 1 cut(s) 2683
AjnI CCWGG 3 cut(s) 125, 1146, 1408
AjuI GAANNNNNNNTTGG 2 cut(s) 1769, 1801
AloI GAACNNNNNNTCC 2 cut(s) 1235, 1267
Alw21I GWGCWC 1 cut(s) 2133
Alw26I GTCTC 5 cut(s) 50, 524, 1361, 1903, 2462
AlwI GGATC 8 cut(s) 648, 1206, 1458, 2119, 2386, 2399, 2810, 2823
AlwNI CAGNNNCTG 1 cut(s) 1735
Ama87I CYCGRG 1 cut(s) 2132
Aor13HI TCCGGA 1 cut(s) 451
AoxI GGCC 8 cut(s) 69, 607, 1424, 1714, 1886, 2217, 2301, 2530
ArsI GACNNNNNNTTYG 2 cut(s) 2649, 2681
AseI ATTAAT 4 cut(s) 920, 1017, 1292, 2364
Asp700I GAANNNNTTC 2 cut(s) 650, 2028
AspLEI GCGC 1 cut(s) 2968
AspS9I GGNCC 2 cut(s) 806, 1714
AsuC2I CCSGG 3 cut(s) 1196, 1255, 2184
AsuHPI GGTGA 7 cut(s) 173, 383, 971, 1559, 1894, 2153, 2552
AvaI CYCGRG 1 cut(s) 2132
AvaII GGWCC 1 cut(s) 806
AxyI CCTNAGG 3 cut(s) 263, 1485, 2355
BalI TGGCCA 3 cut(s) 609, 1426, 2532
BamHI GGATCC 2 cut(s) 2391, 2815
BarI GAAGNNNNNNTAC 2 cut(s) 2547, 2579
Bbv12I GWGCWC 1 cut(s) 2133
BbvCI CCTCAGC 1 cut(s) 2080
BccI CCATC 5 cut(s) 306, 945, 1273, 1435, 2063
BceAI ACGGC 2 cut(s) 15, 2710
BciT130I CCWGG 3 cut(s) 127, 1148, 1410
BcnI CCSGG 3 cut(s) 1196, 1255, 2184
BcoDI GTCTC 5 cut(s) 50, 524, 1361, 1903, 2462
BfaI CTAG 7 cut(s) 90, 842, 1454, 1520, 1560, 2804, 3023
BfmI CTRYAG 5 cut(s) 206, 231, 1598, 1727, 2961
BfuAI ACCTGC 3 cut(s) 213, 1605, 1852
BisI GCNGC 1 cut(s) 2784
BlsI GCNGC 1 cut(s) 2785
BmcAI AGTACT 1 cut(s) 776
Bme1390I CCNGG 6 cut(s) 127, 1148, 1196, 1255, 1410, 2184
Bme18I GGWCC 1 cut(s) 806
BmeRI GACNNNNNGTC 1 cut(s) 208
BmeT110I CYCGRG 1 cut(s) 2132
BmgBI CACGTC 1 cut(s) 2683
BmgT120I GGNCC 2 cut(s) 806, 1714
BmiI GGNNCC 2 cut(s) 2393, 2817
BmrFI CCNGG 6 cut(s) 127, 1148, 1196, 1255, 1410, 2184
BmsI GCATC 3 cut(s) 1640, 2359, 2706
BpmI CTGGAG 5 cut(s) 1169, 1431, 1710, 2610, 2625
Bpu10I CCTNAGC 1 cut(s) 2080
BpuEI CTTGAG 6 cut(s) 791, 932, 985, 1927, 2018, 2477
BpuMI CCSGG 3 cut(s) 1196, 1255, 2184
BsaI GGTCTC 1 cut(s) 2462
BsaJI CCNNGG 6 cut(s) 31, 524, 727, 764, 1194, 2607
BsaWI WCCGGW 2 cut(s) 451, 656
Bsc4I CCNNNNNNNGG 8 cut(s) 245, 892, 1201, 1202, 1486, 1759, 1778, 2648
Bse1I ACTGG 3 cut(s) 72, 1341, 2725
Bse21I CCTNAGG 3 cut(s) 263, 1485, 2355
Bse3DI GCAATG 2 cut(s) 2418, 2430
BseAI TCCGGA 1 cut(s) 451
BseBI CCWGG 3 cut(s) 127, 1148, 1410
BseDI CCNNGG 6 cut(s) 31, 524, 727, 764, 1194, 2607
BseGI GGATG 4 cut(s) 1265, 2179, 2350, 2697
BseLI CCNNNNNNNGG 8 cut(s) 245, 892, 1201, 1202, 1486, 1759, 1778, 2648
BseMI GCAATG 2 cut(s) 2418, 2430
BseMII CTCAG 9 cut(s) 254, 379, 687, 1476, 2094, 2199, 2369, 2420, 2985
BseNI ACTGG 3 cut(s) 72, 1341, 2725
BseRI GAGGAG 3 cut(s) 470, 2068, 2628
BsgI GTGCAG 1 cut(s) 2778
Bsh1236I CGCG 1 cut(s) 2968
BshFI GGCC 8 cut(s) 71, 609, 1426, 1716, 1888, 2219, 2303, 2532
BsiHKAI GWGCWC 1 cut(s) 2133
BsiHKCI CYCGRG 1 cut(s) 2132
BsiSI CCGG 6 cut(s) 452, 657, 1196, 1254, 1628, 2183
BslFI GGGAC 5 cut(s) 869, 1472, 1528, 1633, 2670
BslI CCNNNNNNNGG 8 cut(s) 245, 892, 1201, 1202, 1486, 1759, 1778, 2648
BsmAI GTCTC 5 cut(s) 50, 524, 1361, 1903, 2462
BsmFI GGGAC 5 cut(s) 869, 1472, 1528, 1633, 2670
BsmI GAATGC 2 cut(s) 1798, 2915
BsnI GGCC 8 cut(s) 71, 609, 1426, 1716, 1888, 2219, 2303, 2532
Bso31I GGTCTC 1 cut(s) 2462
BsoBI CYCGRG 1 cut(s) 2132
Bsp1286I GDGCHC 1 cut(s) 2133
Bsp13I TCCGGA 1 cut(s) 451
Bsp1407I TGTACA 1 cut(s) 2685
Bsp143I GATC 9 cut(s) 640, 1198, 1450, 2091, 2111, 2391, 2488, 2593, 2815
Bsp19I CCATGG 1 cut(s) 727
BspACI CCGC 6 cut(s) 328, 369, 499, 948, 2783, 2968
BspANI GGCC 8 cut(s) 71, 609, 1426, 1716, 1888, 2219, 2303, 2532
BspCNI CTCAG 9 cut(s) 255, 378, 686, 1477, 2093, 2200, 2368, 2419, 2986
BspEI TCCGGA 1 cut(s) 451
BspFNI CGCG 1 cut(s) 2968
BspHI TCATGA 1 cut(s) 1788
BspLI GGNNCC 2 cut(s) 2393, 2817
BspMAI CTGCAG 3 cut(s) 210, 1602, 1731
BspMI ACCTGC 3 cut(s) 213, 1605, 1852
BspPI GGATC 8 cut(s) 648, 1206, 1458, 2119, 2386, 2399, 2810, 2823
BspQI GCTCTTC 1 cut(s) 15
BspTNI GGTCTC 1 cut(s) 2462
BsrDI GCAATG 2 cut(s) 2418, 2430
BsrGI TGTACA 1 cut(s) 2685
BsrI ACTGG 3 cut(s) 72, 1341, 2725
BssECI CCNNGG 6 cut(s) 31, 524, 727, 764, 1194, 2607
BssMI GATC 9 cut(s) 640, 1198, 1450, 2091, 2111, 2391, 2488, 2593, 2815
BssT1I CCWWGG 3 cut(s) 727, 764, 2607
Bst2UI CCWGG 3 cut(s) 127, 1148, 1410
Bst4CI ACNGT 4 cut(s) 100, 1959, 2240, 2584
Bst6I CTCTTC 2 cut(s) 15, 694
BstAUI TGTACA 1 cut(s) 2685
BstC8I GCNNGC 6 cut(s) 6, 226, 397, 1982, 2793, 2944
BstDSI CCRYGG 2 cut(s) 31, 727
BstENI CCTNNNNNAGG 1 cut(s) 1484
BstF5I GGATG 4 cut(s) 1265, 2179, 2350, 2697
BstFNI CGCG 1 cut(s) 2968
BstHHI GCGC 1 cut(s) 2968
BstKTI GATC 9 cut(s) 643, 1201, 1453, 2094, 2114, 2394, 2491, 2596, 2818
BstMAI GTCTC 5 cut(s) 50, 524, 1361, 1903, 2462
BstMBI GATC 9 cut(s) 640, 1198, 1450, 2091, 2111, 2391, 2488, 2593, 2815
BstMWI GCNNNNNNNGC 3 cut(s) 975, 2792, 2965
BstNI CCWGG 3 cut(s) 127, 1148, 1410
BstNSI RCATGY 5 cut(s) 8, 245, 1042, 1984, 2268
BstSCI CCNGG 6 cut(s) 125, 1146, 1194, 1253, 1408, 2182
BstSFI CTRYAG 5 cut(s) 206, 231, 1598, 1727, 2961
BstUI CGCG 1 cut(s) 2968
BstX2I RGATCY 5 cut(s) 640, 1198, 1450, 2391, 2815
BstXI CCANNNNNNTGG 2 cut(s) 803, 875
BstYI RGATCY 5 cut(s) 640, 1198, 1450, 2391, 2815
Bsu36I CCTNAGG 3 cut(s) 263, 1485, 2355
BsuRI GGCC 8 cut(s) 71, 609, 1426, 1716, 1888, 2219, 2303, 2532
BtgI CCRYGG 2 cut(s) 31, 727
BtrI CACGTC 1 cut(s) 2683
BtsCI GGATG 4 cut(s) 1265, 2179, 2350, 2697
BtsI GCAGTG 2 cut(s) 2202, 2482
BtsIMutI CAGTG 5 cut(s) 1358, 1955, 2202, 2482, 2580
BveI ACCTGC 3 cut(s) 213, 1605, 1852
Cac8I GCNNGC 6 cut(s) 6, 226, 397, 1982, 2793, 2944
CaiI CAGNNNCTG 1 cut(s) 1735
CciI TCATGA 1 cut(s) 1788
CfoI GCGC 1 cut(s) 2968
Cfr13I GGNCC 2 cut(s) 806, 1714
CseI GACGC 1 cut(s) 555
Csp6I GTAC 8 cut(s) 775, 1262, 1769, 1969, 2165, 2255, 2274, 2686
CspCI CAANNNNNGTGG 2 cut(s) 1378, 1413
CviQI GTAC 8 cut(s) 775, 1262, 1769, 1969, 2165, 2255, 2274, 2686
DpnI GATC 9 cut(s) 642, 1200, 1452, 2093, 2113, 2393, 2490, 2595, 2817
DpnII GATC 9 cut(s) 640, 1198, 1450, 2091, 2111, 2391, 2488, 2593, 2815
DriI GACNNNNNGTC 1 cut(s) 208
EaeI YGGCCR 3 cut(s) 607, 1424, 2530
Eam1104I CTCTTC 2 cut(s) 15, 694
Eam1105I GACNNNNNGTC 1 cut(s) 208
EarI CTCTTC 2 cut(s) 15, 694
Eco130I CCWWGG 3 cut(s) 727, 764, 2607
Eco147I AGGCCT 2 cut(s) 2219, 2303
Eco31I GGTCTC 1 cut(s) 2462
Eco47I GGWCC 1 cut(s) 806
Eco57I CTGAAG 3 cut(s) 277, 320, 494
Eco81I CCTNAGG 3 cut(s) 263, 1485, 2355
Eco88I CYCGRG 1 cut(s) 2132
EcoNI CCTNNNNNAGG 1 cut(s) 1484
EcoO109I RGGNCCY 1 cut(s) 1714
EcoRI GAATTC 1 cut(s) 1703
EcoRII CCWGG 3 cut(s) 125, 1146, 1408
EcoT14I CCWWGG 3 cut(s) 727, 764, 2607
EcoT22I ATGCAT 1 cut(s) 6
ErhI CCWWGG 3 cut(s) 727, 764, 2607
FaqI GGGAC 5 cut(s) 869, 1472, 1528, 1633, 2670
FauI CCCGC 1 cut(s) 941
FauNDI CATATG 1 cut(s) 1438
FblI GTMKAC 1 cut(s) 2728
Fnu4HI GCNGC 1 cut(s) 2784
FokI GGATG 4 cut(s) 1252, 2166, 2337, 2684
Fsp4HI GCNGC 1 cut(s) 2784
FspBI CTAG 7 cut(s) 90, 842, 1454, 1520, 1560, 2804, 3023
GlaI GCGC 1 cut(s) 2967
GluI GCNGC 1 cut(s) 2784
GsuI CTGGAG 5 cut(s) 1169, 1431, 1710, 2610, 2625
HaeIII GGCC 8 cut(s) 71, 609, 1426, 1716, 1888, 2219, 2303, 2532
HapII CCGG 6 cut(s) 452, 657, 1196, 1254, 1628, 2183
HgaI GACGC 1 cut(s) 555
HhaI GCGC 1 cut(s) 2968
Hin6I GCGC 1 cut(s) 2966
HinP1I GCGC 1 cut(s) 2966
HincII GTYRAC 1 cut(s) 103
HindII GTYRAC 1 cut(s) 103
HindIII AAGCTT 2 cut(s) 1154, 1208
HpaII CCGG 6 cut(s) 452, 657, 1196, 1254, 1628, 2183
HphI GGTGA 7 cut(s) 173, 383, 971, 1559, 1894, 2153, 2552
Hpy188I TCNGA 7 cut(s) 645, 1557, 1737, 2023, 2234, 2409, 2578
Hpy99I CGWCG 1 cut(s) 2684
HpyAV CCTTC 8 cut(s) 897, 1331, 1347, 1490, 2245, 2573, 2711, 2773
HpyCH4III ACNGT 4 cut(s) 100, 1959, 2240, 2584
HpyCH4IV ACGT 1 cut(s) 2682
HpyF10VI GCNNNNNNNGC 3 cut(s) 975, 2792, 2965
HpySE526I ACGT 1 cut(s) 2682
HspAI GCGC 1 cut(s) 2966
Kpn2I TCCGGA 1 cut(s) 451
Kzo9I GATC 9 cut(s) 640, 1198, 1450, 2091, 2111, 2391, 2488, 2593, 2815
LguI GCTCTTC 1 cut(s) 15
LmnI GCTCC 6 cut(s) 457, 1691, 2186, 2331, 2609, 2951
LweI GCATC 3 cut(s) 1640, 2359, 2706
MaeI CTAG 7 cut(s) 90, 842, 1454, 1520, 1560, 2804, 3023
MaeII ACGT 1 cut(s) 2682
MaeIII GTNAC 9 cut(s) 179, 190, 791, 959, 1041, 1184, 1945, 2141, 2540
MalI GATC 9 cut(s) 642, 1200, 1452, 2093, 2113, 2393, 2490, 2595, 2817
MboI GATC 9 cut(s) 640, 1198, 1450, 2091, 2111, 2391, 2488, 2593, 2815
MboII GAAGA 8 cut(s) 5, 681, 694, 1059, 1062, 1125, 2501, 2868
MfeI CAATTG 3 cut(s) 486, 1853, 2625
MflI RGATCY 5 cut(s) 640, 1198, 1450, 2391, 2815
MhlI GDGCHC 1 cut(s) 2133
MlsI TGGCCA 3 cut(s) 609, 1426, 2532
MluNI TGGCCA 3 cut(s) 609, 1426, 2532
MlyI GAGTC 3 cut(s) 123, 732, 1510
MmeI TCCRAC 3 cut(s) 226, 1580, 2919
Mox20I TGGCCA 3 cut(s) 609, 1426, 2532
Mph1103I ATGCAT 1 cut(s) 6
MroI TCCGGA 1 cut(s) 451
MroXI GAANNNNTTC 2 cut(s) 650, 2028
MscI TGGCCA 3 cut(s) 609, 1426, 2532
MslI CAYNNNNRTG 2 cut(s) 2435, 2538
Msp20I TGGCCA 3 cut(s) 609, 1426, 2532
MspA1I CMGCKG 1 cut(s) 369
MspI CCGG 6 cut(s) 452, 657, 1196, 1254, 1628, 2183
MspR9I CCNGG 6 cut(s) 127, 1148, 1196, 1255, 1410, 2184
MunI CAATTG 3 cut(s) 486, 1853, 2625
Mva1269I GAATGC 2 cut(s) 1798, 2915
MvaI CCWGG 3 cut(s) 127, 1148, 1410
MvnI CGCG 1 cut(s) 2968
MwoI GCNNNNNNNGC 3 cut(s) 975, 2792, 2965
NciI CCSGG 3 cut(s) 1196, 1255, 2184
NcoI CCATGG 1 cut(s) 727
NdeI CATATG 1 cut(s) 1438
NdeII GATC 9 cut(s) 640, 1198, 1450, 2091, 2111, 2391, 2488, 2593, 2815
NlaIV GGNNCC 2 cut(s) 2393, 2817
NmuCI GTSAC 6 cut(s) 179, 190, 959, 1184, 2141, 2540
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 5 cut(s) 8, 245, 1042, 1984, 2268
PaeI GCATGC 2 cut(s) 8, 1984
PaeR7I CTCGAG 1 cut(s) 2132
PagI TCATGA 1 cut(s) 1788
PceI AGGCCT 2 cut(s) 2219, 2303
PciI ACATGT 1 cut(s) 241
PciSI GCTCTTC 1 cut(s) 15
PctI GAATGC 2 cut(s) 1798, 2915
PdmI GAANNNNTTC 2 cut(s) 650, 2028
PfeI GAWTC 7 cut(s) 122, 217, 1135, 1366, 1696, 1738, 2073
PflMI CCANNNNNTGG 2 cut(s) 245, 2648
PfoI TCCNGGA 4 cut(s) 125, 1253, 1408, 2182
PkrI GCNGC 1 cut(s) 2785
PleI GAGTC 3 cut(s) 122, 731, 1510
PpsI GAGTC 3 cut(s) 122, 731, 1510
PscI ACATGT 1 cut(s) 241
PshBI ATTAAT 4 cut(s) 920, 1017, 1292, 2364
PsiI TTATAA 3 cut(s) 1386, 1749, 2121
Psp6I CCWGG 3 cut(s) 125, 1146, 1408
PspGI CCWGG 3 cut(s) 125, 1146, 1408
PspN4I GGNNCC 2 cut(s) 2393, 2817
PspPI GGNCC 2 cut(s) 806, 1714
PspXI VCTCGAGB 1 cut(s) 2132
PstI CTGCAG 3 cut(s) 210, 1602, 1731
PstNI CAGNNNCTG 1 cut(s) 1735
PsuI RGATCY 5 cut(s) 640, 1198, 1450, 2391, 2815
RsaI GTAC 8 cut(s) 776, 1263, 1770, 1970, 2166, 2256, 2275, 2687
RsaNI GTAC 8 cut(s) 775, 1262, 1769, 1969, 2165, 2255, 2274, 2686
RseI CAYNNNNRTG 2 cut(s) 2435, 2538
SapI GCTCTTC 1 cut(s) 15
SatI GCNGC 1 cut(s) 2784
Sau3AI GATC 9 cut(s) 640, 1198, 1450, 2091, 2111, 2391, 2488, 2593, 2815
Sau96I GGNCC 2 cut(s) 806, 1714
ScaI AGTACT 1 cut(s) 776
SchI GAGTC 3 cut(s) 123, 732, 1510
ScrFI CCNGG 6 cut(s) 127, 1148, 1196, 1255, 1410, 2184
SduI GDGCHC 1 cut(s) 2133
SfaNI GCATC 3 cut(s) 1640, 2359, 2706
SfcI CTRYAG 5 cut(s) 206, 231, 1598, 1727, 2961
Sfr274I CTCGAG 1 cut(s) 2132
SinI GGWCC 1 cut(s) 806
SlaI CTCGAG 1 cut(s) 2132
SmiMI CAYNNNNRTG 2 cut(s) 2435, 2538
SmlI CTYRAG 7 cut(s) 770, 911, 964, 1906, 2033, 2132, 2492
SmoI CTYRAG 7 cut(s) 770, 911, 964, 1906, 2033, 2132, 2492
SphI GCATGC 2 cut(s) 8, 1984
SseBI AGGCCT 2 cut(s) 2219, 2303
SsiI CCGC 6 cut(s) 328, 369, 499, 948, 2783, 2968
SspI AATATT 3 cut(s) 699, 1661, 2764
SspMI CTAG 7 cut(s) 90, 842, 1454, 1520, 1560, 2804, 3023
StuI AGGCCT 2 cut(s) 2219, 2303
StyD4I CCNGG 6 cut(s) 125, 1146, 1194, 1253, 1408, 2182
StyI CCWWGG 3 cut(s) 727, 764, 2607
TaaI ACNGT 4 cut(s) 100, 1959, 2240, 2584
TaiI ACGT 1 cut(s) 2685
TaqI TCGA 3 cut(s) 1719, 2133, 3004
TaqII GACCGA 1 cut(s) 516
TatI WGTACW 3 cut(s) 774, 1968, 2685
TauI GCSGC 1 cut(s) 2786
TfiI GAWTC 7 cut(s) 122, 217, 1135, 1366, 1696, 1738, 2073
TscAI CASTG 5 cut(s) 1358, 1962, 2209, 2489, 2587
TseFI GTSAC 6 cut(s) 179, 190, 959, 1184, 2141, 2540
Tsp45I GTSAC 6 cut(s) 179, 190, 959, 1184, 2141, 2540
TspRI CASTG 5 cut(s) 1358, 1962, 2209, 2489, 2587
Van91I CCANNNNNTGG 2 cut(s) 245, 2648
VpaK11BI GGWCC 1 cut(s) 806
VspI ATTAAT 4 cut(s) 920, 1017, 1292, 2364
XagI CCTNNNNNAGG 1 cut(s) 1484
XbaI TCTAGA 2 cut(s) 1519, 2803
XceI RCATGY 5 cut(s) 8, 245, 1042, 1984, 2268
XhoI CTCGAG 1 cut(s) 2132
XmiI GTMKAC 1 cut(s) 2728
XmnI GAANNNNTTC 2 cut(s) 650, 2028
XspI CTAG 7 cut(s) 90, 842, 1454, 1520, 1560, 2804, 3023
ZrmI AGTACT 1 cut(s) 776
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.