FvH4_3g18950

F-box kelch-repeat protein At3g23880-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000068
Physical Location & Seq
Forward (+)
12187259 .. 12190005
2747 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g18950.t1

Sequence Viewer

Length: 1287 bp
ATGTGGGACGATTGCTATGAACGTAAGTCTCTCTTGACACCTCCATCCGCCTCTAAGCTTTGTCTGTCCATTTCTTATGTCATCACAAACTGGCTCGAATCTCTCCCTCAAGAACTCATACCCGAAATCCTAATCAGACTACCCACCAAATCCCTCATCAAATTCACCTCTGTCTGTAAATCTTGGAACTCCACCATCAAAGACCCAAAATTTATCCGCACCCACACTCTCAATTTGAATGACCGAAATGCCACCCACCTCCTTCTCCTCCACGCTGTTCACTGTCAACGCTACTGGAGTAGAACTGAAGAAAGAGTCCAAATCTCTGGGTTCCAAGAAGACACTTACTCTCTGCTTCATGACGACACTGCTGTCTCTGAGTATCGCAACATTGAGTTACCATTAGTTCTTGATAAAAAATTGATCAATCCGTGTTTTCGTGTGGTGGGTACTTGTAATGGGCTGGTTTTGCTTGCTGATGATTTCGGGGAATATGGTCACACCATTGTTATATGGAATCCTAGTGTTAGGAAGTATGTGACCCTTCCCAAGTTTTCGACGCGCCGTAAATATGATGCTTCACTTGGTCTGGGTTATGATGCTATTGGTAATGACTATAAGGTTGTGAGACTGACAGATCATATCGACGAATGTGAACCTGATGAGTGCCGGAGTAAAGCTCAGGTGTATTCACTGGCCAAGGGAGCTTGGAGCATGCTGCGTCCTGTTCCTGATTGTTTTTTGCCTGATGAATTTTATGGCCTTGTTTTTGTCAAGGGGGCACTTCACTGGGTGGCTGCTGTTTGGACACACGGCGAGCCATATCCCTACTATTTCATTTTGACATTTGATGTGGCTGGTGAGACATTTGGAAAGATTGAGTTCCCCATGAGATTGGAATTGGAGGACGTAGTGGACTTGAGGTTGTCTGTTTCTGGAGATAGAAAATCTATTGCTCTGTTTGTGAAGTGTTTGAATTTTGAGGGTGGTGATTCTTTTCTTGATATTTGGGTAATGAAAGAGTACAGTGAGGAGAAATCATGGACAAAATTGGTGGCTCTCAGTCCACAAGGTCCGGAAAGAAGTCTACCCAGGGCATGGGCATTTTGTTTAAAGAGGAGTGGTGAAGTGATATTGCAACTTGACGGTAGCCCTGAGTTAGTTTCTCTTGACGTTTTGAGCAAACAGTTTAAACATCTAGGAATATCTGGAGGGGAAATTTGCTCTGTTGACTCTTTTGAAGAGAGCCTTGTCTTGCTCGACAGGAATGATGCAGTTTCATACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

429

Amino Acids

48.82

Weight (kDa)

5.49

Isoelectric Point (pI)

36.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 32 - 73 2.5e-10 F-box domain
F-box-like PF12937 32 - 74 2.6e-07 F-box-like
FBA_1 PF07734 146 - 355 1.9e-26 F-box associated beta propeller domain
FBA_3 PF08268 147 - 379 9.2e-21 F-box associated beta propeller domain
b-prop_At3g26010-like PF24750 148 - 297 5.3e-06 F-box protein At3g26010-like, beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 371
AccB7I CCANNNNNTGG 1 cut(s) 1098
AccI GTMKAC 1 cut(s) 1087
AccII CGCG 1 cut(s) 562
AccIII TCCGGA 1 cut(s) 1075
AciI CCGC 2 cut(s) 48, 217
AcoI YGGCCR 1 cut(s) 696
AcsI RAATTY 5 cut(s) 161, 209, 752, 976, 1218
AcuI CTGAAG 1 cut(s) 327
AdeI CACNNNGTG 1 cut(s) 793
AfaI GTAC 2 cut(s) 451, 1025
AfiI CCNNNNNNNGG 1 cut(s) 1098
AgsI TTSAA 3 cut(s) 238, 976, 1241
AjnI CCWGG 1 cut(s) 1091
AluBI AGCT 3 cut(s) 58, 680, 707
AluI AGCT 3 cut(s) 58, 680, 707
Alw26I GTCTC 4 cut(s) 33, 379, 622, 857
Aor13HI TCCGGA 1 cut(s) 1075
AoxI GGCC 2 cut(s) 696, 760
ApeKI GCWGC 2 cut(s) 718, 797
ApoI RAATTY 5 cut(s) 161, 209, 752, 976, 1218
AspLEI GCGC 1 cut(s) 564
AspS9I GGNCC 1 cut(s) 1073
AsuHPI GGTGA 4 cut(s) 157, 872, 1001, 1136
AvaII GGWCC 1 cut(s) 1073
BaeGI GKGCMC 1 cut(s) 784
BalI TGGCCA 1 cut(s) 698
BbsI GAAGAC 1 cut(s) 345
BbvI GCAGC 2 cut(s) 705, 784
BccI CCATC 2 cut(s) 52, 203
BceAI ACGGC 2 cut(s) 549, 829
BciT130I CCWGG 1 cut(s) 1093
BclI TGATCA 1 cut(s) 423
BcoDI GTCTC 4 cut(s) 33, 379, 622, 857
BfaI CTAG 2 cut(s) 522, 1199
BisI GCNGC 2 cut(s) 719, 798
BlsI GCNGC 2 cut(s) 720, 799
Bme1390I CCNGG 1 cut(s) 1093
Bme18I GGWCC 1 cut(s) 1073
BmgT120I GGNCC 1 cut(s) 1073
BmiI GGNNCC 1 cut(s) 332
BmrFI CCNGG 1 cut(s) 1093
BmrI ACTGGG 1 cut(s) 799
BmsI GCATC 3 cut(s) 565, 589, 1261
BmuI ACTGGG 1 cut(s) 799
BpiI GAAGAC 1 cut(s) 345
BplI GAGNNNNNCTC 2 cut(s) 664, 696
BpmI CTGGAG 3 cut(s) 316, 957, 1230
Bpu10I CCTNAGC 1 cut(s) 681
BpuEI CTTGAG 2 cut(s) 93, 940
BsaJI CCNNGG 3 cut(s) 699, 1091, 1092
BsaWI WCCGGW 1 cut(s) 1075
Bsc4I CCNNNNNNNGG 1 cut(s) 1098
Bse1I ACTGG 4 cut(s) 95, 299, 699, 794
BseAI TCCGGA 1 cut(s) 1075
BseBI CCWGG 1 cut(s) 1093
BseDI CCNNGG 3 cut(s) 699, 1091, 1092
BseGI GGATG 1 cut(s) 44
BseLI CCNNNNNNNGG 1 cut(s) 1098
BseMII CTCAG 4 cut(s) 369, 695, 1075, 1146
BseNI ACTGG 4 cut(s) 95, 299, 699, 794
BseRI GAGGAG 3 cut(s) 257, 1046, 1132
BseSI GKGCMC 1 cut(s) 784
BseXI GCAGC 2 cut(s) 705, 784
Bsh1236I CGCG 1 cut(s) 562
BshFI GGCC 2 cut(s) 698, 762
BsiSI CCGG 2 cut(s) 670, 1076
BslFI GGGAC 1 cut(s) 20
BslI CCNNNNNNNGG 1 cut(s) 1098
BsmAI GTCTC 4 cut(s) 33, 379, 622, 857
BsmFI GGGAC 1 cut(s) 20
BsnI GGCC 2 cut(s) 698, 762
Bsp1286I GDGCHC 1 cut(s) 784
Bsp13I TCCGGA 1 cut(s) 1075
Bsp143I GATC 2 cut(s) 423, 637
BspACI CCGC 2 cut(s) 48, 217
BspANI GGCC 2 cut(s) 698, 762
BspCNI CTCAG 4 cut(s) 370, 694, 1074, 1147
BspEI TCCGGA 1 cut(s) 1075
BspFNI CGCG 1 cut(s) 562
BspHI TCATGA 1 cut(s) 358
BspLI GGNNCC 1 cut(s) 332
BsrI ACTGG 4 cut(s) 95, 299, 699, 794
BssECI CCNNGG 3 cut(s) 699, 1091, 1092
BssMI GATC 2 cut(s) 423, 637
BssT1I CCWWGG 1 cut(s) 699
Bst2UI CCWGG 1 cut(s) 1093
Bst4CI ACNGT 4 cut(s) 284, 1028, 1148, 1188
Bst6I CTCTTC 1 cut(s) 1236
BstC8I GCNNGC 3 cut(s) 474, 716, 818
BstDEI CTNAG 5 cut(s) 54, 378, 681, 1061, 1155
BstF5I GGATG 1 cut(s) 44
BstFNI CGCG 1 cut(s) 562
BstHHI GCGC 1 cut(s) 564
BstKTI GATC 2 cut(s) 426, 640
BstMAI GTCTC 4 cut(s) 33, 379, 622, 857
BstMBI GATC 2 cut(s) 423, 637
BstMWI GCNNNNNNNGC 2 cut(s) 469, 704
BstNI CCWGG 1 cut(s) 1093
BstNSI RCATGY 1 cut(s) 718
BstSCI CCNGG 1 cut(s) 1091
BstSLI GKGCMC 1 cut(s) 784
BstUI CGCG 1 cut(s) 562
BstV1I GCAGC 2 cut(s) 705, 784
BstV2I GAAGAC 1 cut(s) 345
BstXI CCANNNNNNTGG 2 cut(s) 326, 895
BsuRI GGCC 2 cut(s) 698, 762
BtsCI GGATG 1 cut(s) 44
BtsI GCAGTG 1 cut(s) 366
BtsIMutI CAGTG 5 cut(s) 280, 366, 692, 787, 1033
Cac8I GCNNGC 3 cut(s) 474, 716, 818
CciI TCATGA 1 cut(s) 358
CfoI GCGC 1 cut(s) 564
Cfr13I GGNCC 1 cut(s) 1073
CseI GACGC 2 cut(s) 568, 710
Csp6I GTAC 2 cut(s) 450, 1024
CspCI CAANNNNNGTGG 2 cut(s) 1035, 1070
CviAII CATG 5 cut(s) 359, 715, 889, 1041, 1098
CviQI GTAC 2 cut(s) 450, 1024
DdeI CTNAG 5 cut(s) 54, 378, 681, 1061, 1155
DpnI GATC 2 cut(s) 425, 639
DpnII GATC 2 cut(s) 423, 637
DraI TTTAAA 2 cut(s) 1113, 1192
DraIII CACNNNGTG 1 cut(s) 793
DrdI GACNNNNNNGTC 1 cut(s) 371
DseDI GACNNNNNNGTC 1 cut(s) 371
EaeI YGGCCR 1 cut(s) 696
Eam1104I CTCTTC 1 cut(s) 1236
EarI CTCTTC 1 cut(s) 1236
EciI GGCGGA 1 cut(s) 37
Eco130I CCWWGG 1 cut(s) 699
Eco47I GGWCC 1 cut(s) 1073
Eco57I CTGAAG 1 cut(s) 327
EcoRII CCWGG 1 cut(s) 1091
EcoT14I CCWWGG 1 cut(s) 699
ErhI CCWWGG 1 cut(s) 699
FaeI CATG 5 cut(s) 362, 718, 892, 1044, 1101
FalI AAGNNNNNCTT 4 cut(s) 17, 49, 1233, 1265
FaqI GGGAC 1 cut(s) 20
FatI CATG 5 cut(s) 358, 714, 888, 1040, 1097
FbaI TGATCA 1 cut(s) 423
FblI GTMKAC 1 cut(s) 1087
Fnu4HI GCNGC 2 cut(s) 719, 798
FokI GGATG 1 cut(s) 31
Fsp4HI GCNGC 2 cut(s) 719, 798
FspBI CTAG 2 cut(s) 522, 1199
GlaI GCGC 1 cut(s) 563
GluI GCNGC 2 cut(s) 719, 798
GsuI CTGGAG 3 cut(s) 316, 957, 1230
HaeIII GGCC 2 cut(s) 698, 762
HapII CCGG 2 cut(s) 670, 1076
HgaI GACGC 2 cut(s) 568, 710
HhaI GCGC 1 cut(s) 564
Hin1II CATG 5 cut(s) 362, 718, 892, 1044, 1101
Hin6I GCGC 1 cut(s) 562
HinP1I GCGC 1 cut(s) 562
HincII GTYRAC 2 cut(s) 287, 1231
HindII GTYRAC 2 cut(s) 287, 1231
HindIII AAGCTT 1 cut(s) 56
HinfI GANTC 5 cut(s) 98, 315, 517, 992, 1232
HpaII CCGG 2 cut(s) 670, 1076
HphI GGTGA 4 cut(s) 157, 872, 1001, 1136
Hpy166II GTNNAC 7 cut(s) 280, 287, 656, 916, 1067, 1088, 1231
Hpy188I TCNGA 2 cut(s) 137, 379
Hpy8I GTNNAC 7 cut(s) 280, 287, 656, 916, 1067, 1088, 1231
Hpy99I CGWCG 2 cut(s) 562, 650
HpyAV CCTTC 2 cut(s) 272, 554
HpyCH4III ACNGT 4 cut(s) 284, 1028, 1148, 1188
HpyCH4IV ACGT 3 cut(s) 22, 909, 1173
HpyCH4V TGCA 2 cut(s) 1138, 1274
HpyF10VI GCNNNNNNNGC 2 cut(s) 469, 704
HpyF3I CTNAG 5 cut(s) 54, 378, 681, 1061, 1155
HpySE526I ACGT 3 cut(s) 22, 909, 1173
Hsp92II CATG 5 cut(s) 362, 718, 892, 1044, 1101
HspAI GCGC 1 cut(s) 562
Kpn2I TCCGGA 1 cut(s) 1075
Ksp22I TGATCA 1 cut(s) 423
Kzo9I GATC 2 cut(s) 423, 637
LmnI GCTCC 2 cut(s) 704, 711
Lsp1109I GCAGC 2 cut(s) 705, 784
LweI GCATC 3 cut(s) 565, 589, 1261
MaeI CTAG 2 cut(s) 522, 1199
MaeII ACGT 3 cut(s) 22, 909, 1173
MaeIII GTNAC 3 cut(s) 396, 497, 538
MalI GATC 2 cut(s) 425, 639
MboI GATC 2 cut(s) 423, 637
MboII GAAGA 3 cut(s) 320, 350, 1253
MhlI GDGCHC 1 cut(s) 784
MlsI TGGCCA 1 cut(s) 698
MluCI AATT 9 cut(s) 161, 209, 232, 419, 752, 899, 976, 1049, 1218
MluNI TGGCCA 1 cut(s) 698
MlyI GAGTC 2 cut(s) 324, 1226
Mox20I TGGCCA 1 cut(s) 698
MroI TCCGGA 1 cut(s) 1075
MscI TGGCCA 1 cut(s) 698
MseI TTAA 2 cut(s) 1112, 1191
Msp20I TGGCCA 1 cut(s) 698
MspI CCGG 2 cut(s) 670, 1076
MspR9I CCNGG 1 cut(s) 1093
MssI GTTTAAAC 1 cut(s) 1192
MvaI CCWGG 1 cut(s) 1093
MvnI CGCG 1 cut(s) 562
MwoI GCNNNNNNNGC 2 cut(s) 469, 704
NdeII GATC 2 cut(s) 423, 637
NlaIII CATG 5 cut(s) 362, 718, 892, 1044, 1101
NlaIV GGNNCC 1 cut(s) 332
NmuCI GTSAC 2 cut(s) 497, 538
NspI RCATGY 1 cut(s) 718
PaeI GCATGC 1 cut(s) 718
PagI TCATGA 1 cut(s) 358
PasI CCCWGGG 1 cut(s) 1092
PfeI GAWTC 3 cut(s) 98, 517, 992
PflMI CCANNNNNTGG 1 cut(s) 1098
PkrI GCNGC 2 cut(s) 720, 799
PleI GAGTC 2 cut(s) 323, 1226
PmeI GTTTAAAC 1 cut(s) 1192
PpsI GAGTC 2 cut(s) 323, 1226
Psp6I CCWGG 1 cut(s) 1091
PspGI CCWGG 1 cut(s) 1091
PspN4I GGNNCC 1 cut(s) 332
PspPI GGNCC 1 cut(s) 1073
RsaI GTAC 2 cut(s) 451, 1025
RsaNI GTAC 2 cut(s) 450, 1024
SaqAI TTAA 2 cut(s) 1112, 1191
SatI GCNGC 2 cut(s) 719, 798
Sau3AI GATC 2 cut(s) 423, 637
Sau96I GGNCC 1 cut(s) 1073
SchI GAGTC 2 cut(s) 324, 1226
ScrFI CCNGG 1 cut(s) 1093
SduI GDGCHC 1 cut(s) 784
SfaNI GCATC 3 cut(s) 565, 589, 1261
SinI GGWCC 1 cut(s) 1073
SmlI CTYRAG 2 cut(s) 108, 919
SmoI CTYRAG 2 cut(s) 108, 919
SphI GCATGC 1 cut(s) 718
Sse9I AATT 9 cut(s) 161, 209, 232, 419, 752, 899, 976, 1049, 1218
SsiI CCGC 2 cut(s) 48, 217
SspMI CTAG 2 cut(s) 522, 1199
StyD4I CCNGG 1 cut(s) 1091
StyI CCWWGG 1 cut(s) 699
TaaI ACNGT 4 cut(s) 284, 1028, 1148, 1188
TaiI ACGT 3 cut(s) 25, 912, 1176
TaqI TCGA 4 cut(s) 96, 557, 645, 1260
TaqII GACCGA 1 cut(s) 258
TasI AATT 9 cut(s) 161, 209, 232, 419, 752, 899, 976, 1049, 1218
TatI WGTACW 1 cut(s) 1023
TfiI GAWTC 3 cut(s) 98, 517, 992
Tru1I TTAA 2 cut(s) 1112, 1191
Tru9I TTAA 2 cut(s) 1112, 1191
TscAI CASTG 5 cut(s) 287, 373, 699, 794, 1033
TseFI GTSAC 2 cut(s) 497, 538
TseI GCWGC 2 cut(s) 718, 797
Tsp45I GTSAC 2 cut(s) 497, 538
TspDTI ATGAA 6 cut(s) 33, 347, 765, 826, 1031, 1269
TspGWI ACGGA 1 cut(s) 420
TspRI CASTG 5 cut(s) 287, 373, 699, 794, 1033
Van91I CCANNNNNTGG 1 cut(s) 1098
VpaK11BI GGWCC 1 cut(s) 1073
XapI RAATTY 5 cut(s) 161, 209, 752, 976, 1218
XceI RCATGY 1 cut(s) 718
XmiI GTMKAC 1 cut(s) 1087
XspI CTAG 2 cut(s) 522, 1199
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.