Rroxscaffold_1G00005800

F-box kelch-repeat protein At3g23880-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000068
Physical Location & Seq
Reverse (-)
7840738 .. 7841978
1241 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00005800.1

Sequence Viewer

Length: 1101 bp
ATGTCAGACTATCTTCCTCAGGAAGTCATAACCAATATATTACTTAGACTACCCAGTAAATCTTTGGTCATATGCACCTCAGTATGCAAGTCGTGGAGGTCCATGATTAAAGACTCATGCTTTATTGGCGCCCACCTCAGCCGAACGATCAATTTTAACAACCACCATGGCACTCACCTCCTACTACTTCACAGGTTTTCTAGCATCAGGGACCACAGGAGTTCAATCCACGGGGTAAAAGAGGAGGTTTGCTCTTTGCATTATGATAACGACGCTTTTGATGATTGCTGTGAGATAGGATTTCAATCTCCAGTTGCTGTTACGGAAATGTATAATGAGTGTTTCCGCGTGGTTGGTGTTTGTAATGGGCTGGTATGCCTCGCAGATGATTTAGAACACTATGGTTACAACTTCTTGATATGGAATCCCTCTATAAGAAAGTTAGTAACCCTTCCCAAGCCTGGCCTTACCTTTCAGACTGTTGGTGGGTATGATGCTTATCATGGTTTTGCGTTTGATGCTATTACCAATGACTATAAGGTTGTGAGGCTTGTCGAGGATCAATATGGATGGAATGACGAACAAGCTGAGAGTCGAACTTTTGTGGAGATTTATTCCCTAGCTGCAGGCTCATGGAGTAGTCCTAGGTTTGTTGATCCCCGACGTTCGTTACTTGGAGAACGCTTAGCCCAGGCTTTTGTTAATGGGGCTCTTCGTTGGGATGCATACGGTTCGGGAAGTAAGCTACATTATATATTGGCATTTGATGTGGGCAGTGAGTTATTCCGGGAGATAATGATGCCAGAGAGTTTGGATTGGGATTCATTTAAGTCATGGCATGGAGACTTGTCATTGCGATTGTCTGTTTCAGGAGATGGAAAATCCCTTGCTCTGTTCATGAGGAAGAGCGGTGAAGTAGTAATGGTACGTAATCTTAAGCAGCATTATGGAGGCGAAGAAGCTATAAATGAATTAGTTTCGCTAGATCTTGTGAGTGGACAATTCAAGAATCTTGGGATTTGTGGATATAAATATTACACCATTGATCCTTATGAAGAAAGCATTGTCCTACTTGACAAGAATGAAGCAGTTTCTTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

366

Amino Acids

41.41

Weight (kDa)

5.53

Isoelectric Point (pI)

46.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 4 - 39 1.6e-08 F-box-like
F-box PF00646 5 - 41 3.9e-09 F-box domain
FBA_3 PF08268 111 - 272 3.2e-16 F-box associated beta propeller domain
b-prop_At3g26010-like PF24750 116 - 257 8.3e-06 F-box protein At3g26010-like, beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 128
AccBSI CCGCTC 1 cut(s) 909
AccII CGCG 1 cut(s) 348
AciI CCGC 2 cut(s) 346, 909
AclWI GGATC 3 cut(s) 567, 650, 1040
AcyI GRCGYC 1 cut(s) 129
AfaI GTAC 1 cut(s) 927
AfiI CCNNNNNNNGG 1 cut(s) 461
AflII CTTAAG 1 cut(s) 935
AgsI TTSAA 3 cut(s) 225, 305, 1006
AjnI CCWGG 2 cut(s) 460, 690
AluBI AGCT 4 cut(s) 587, 623, 745, 962
AluI AGCT 4 cut(s) 587, 623, 745, 962
Alw26I GTCTC 1 cut(s) 837
AlwI GGATC 3 cut(s) 567, 650, 1040
AlwNI CAGNNNCTG 1 cut(s) 317
AoxI GGCC 1 cut(s) 463
ApeKI GCWGC 2 cut(s) 623, 940
AspA2I CCTAGG 1 cut(s) 644
AspLEI GCGC 1 cut(s) 131
AspS9I GGNCC 2 cut(s) 99, 211
AsuC2I CCSGG 1 cut(s) 788
AsuHPI GGTGA 2 cut(s) 167, 923
AvaII GGWCC 2 cut(s) 99, 211
AvrII CCTAGG 1 cut(s) 644
AxyI CCTNAGG 1 cut(s) 18
BanI GGYRCC 1 cut(s) 128
BanII GRGCYC 1 cut(s) 712
BbvCI CCTCAGC 1 cut(s) 137
BbvI GCAGC 2 cut(s) 610, 952
BccI CCATC 2 cut(s) 564, 869
BcgI CGANNNNNNTGC 2 cut(s) 714, 748
BciT130I CCWGG 2 cut(s) 462, 692
BcnI CCSGG 1 cut(s) 788
BcoDI GTCTC 1 cut(s) 837
BfaI CTAG 4 cut(s) 201, 620, 645, 983
BfmI CTRYAG 1 cut(s) 624
BfoI RGCGCY 1 cut(s) 132
BfrI CTTAAG 1 cut(s) 935
BglII AGATCT 1 cut(s) 985
BisI GCNGC 2 cut(s) 624, 941
BlnI CCTAGG 1 cut(s) 644
BlpI GCTNAGC 1 cut(s) 685
BlsI GCNGC 2 cut(s) 625, 942
Bme1390I CCNGG 3 cut(s) 462, 692, 788
Bme18I GGWCC 2 cut(s) 99, 211
BmgT120I GGNCC 2 cut(s) 99, 211
BmiI GGNNCC 2 cut(s) 130, 212
BmrFI CCNGG 3 cut(s) 462, 692, 788
BmrI ACTGGG 1 cut(s) 48
BmsI GCATC 5 cut(s) 213, 484, 508, 712, 789
BmuI ACTGGG 1 cut(s) 48
BplI GAGNNNNNCTC 2 cut(s) 236, 268
BpmI CTGGAG 1 cut(s) 294
Bpu10I CCTNAGC 1 cut(s) 137
Bpu1102I GCTNAGC 1 cut(s) 685
BpuMI CCSGG 1 cut(s) 788
BsaAI YACGTR 1 cut(s) 929
BsaBI GATNNNNATC 2 cut(s) 304, 498
BsaHI GRCGYC 1 cut(s) 129
BsaJI CCNNGG 4 cut(s) 166, 229, 644, 690
Bsc4I CCNNNNNNNGG 1 cut(s) 461
Bse1I ACTGG 2 cut(s) 54, 311
Bse21I CCTNAGG 1 cut(s) 18
Bse3DI GCAATG 1 cut(s) 851
Bse8I GATNNNNATC 2 cut(s) 304, 498
BseBI CCWGG 2 cut(s) 462, 692
BseDI CCNNGG 4 cut(s) 166, 229, 644, 690
BseGI GGATG 2 cut(s) 575, 727
BseJI GATNNNNATC 2 cut(s) 304, 498
BseLI CCNNNNNNNGG 1 cut(s) 461
BseMI GCAATG 1 cut(s) 851
BseMII CTCAG 4 cut(s) 32, 93, 151, 579
BseNI ACTGG 2 cut(s) 54, 311
BseRI GAGGAG 1 cut(s) 257
BseXI GCAGC 2 cut(s) 610, 952
Bsh1236I CGCG 1 cut(s) 348
BshFI GGCC 1 cut(s) 465
BshNI GGYRCC 1 cut(s) 128
BsiSI CCGG 1 cut(s) 787
BslFI GGGAC 1 cut(s) 224
BslI CCNNNNNNNGG 1 cut(s) 461
BsmAI GTCTC 1 cut(s) 837
BsmFI GGGAC 1 cut(s) 224
BsnI GGCC 1 cut(s) 465
Bsp1286I GDGCHC 1 cut(s) 712
Bsp143I GATC 5 cut(s) 147, 559, 655, 985, 1045
Bsp1720I GCTNAGC 1 cut(s) 685
Bsp19I CCATGG 1 cut(s) 166
BspACI CCGC 2 cut(s) 346, 909
BspANI GGCC 1 cut(s) 465
BspCNI CTCAG 4 cut(s) 31, 92, 150, 580
BspFNI CGCG 1 cut(s) 348
BspHI TCATGA 1 cut(s) 897
BspLI GGNNCC 2 cut(s) 130, 212
BspMAI CTGCAG 1 cut(s) 628
BspPI GGATC 3 cut(s) 567, 650, 1040
BspQI GCTCTTC 2 cut(s) 717, 899
BspT107I GGYRCC 1 cut(s) 128
BspTI CTTAAG 1 cut(s) 935
BsrBI CCGCTC 1 cut(s) 909
BsrDI GCAATG 1 cut(s) 851
BsrI ACTGG 2 cut(s) 54, 311
BssECI CCNNGG 4 cut(s) 166, 229, 644, 690
BssMI GATC 5 cut(s) 147, 559, 655, 985, 1045
BssNI GRCGYC 1 cut(s) 129
BssT1I CCWWGG 2 cut(s) 166, 644
Bst2UI CCWGG 2 cut(s) 462, 692
Bst4CI ACNGT 2 cut(s) 481, 731
Bst6I CTCTTC 2 cut(s) 717, 899
BstACI GRCGYC 1 cut(s) 129
BstAFI CTTAAG 1 cut(s) 935
BstBAI YACGTR 1 cut(s) 929
BstC8I GCNNGC 1 cut(s) 628
BstDEI CTNAG 6 cut(s) 18, 44, 79, 137, 588, 685
BstDSI CCRYGG 2 cut(s) 166, 229
BstF5I GGATG 2 cut(s) 575, 727
BstFNI CGCG 1 cut(s) 348
BstH2I RGCGCY 1 cut(s) 132
BstHHI GCGC 1 cut(s) 131
BstKTI GATC 5 cut(s) 150, 562, 658, 988, 1048
BstMAI GTCTC 1 cut(s) 837
BstMBI GATC 5 cut(s) 147, 559, 655, 985, 1045
BstMWI GCNNNNNNNGC 2 cut(s) 126, 518
BstNI CCWGG 2 cut(s) 462, 692
BstSCI CCNGG 3 cut(s) 460, 690, 786
BstSFI CTRYAG 1 cut(s) 624
BstSNI TACGTA 1 cut(s) 929
BstUI CGCG 1 cut(s) 348
BstV1I GCAGC 2 cut(s) 610, 952
BstX2I RGATCY 1 cut(s) 985
BstYI RGATCY 1 cut(s) 985
Bsu36I CCTNAGG 1 cut(s) 18
BsuRI GGCC 1 cut(s) 465
BtgI CCRYGG 2 cut(s) 166, 229
BtsCI GGATG 2 cut(s) 575, 727
BtsI GCAGTG 1 cut(s) 781
BtsIMutI CAGTG 1 cut(s) 781
Cac8I GCNNGC 1 cut(s) 628
CaiI CAGNNNCTG 1 cut(s) 317
CciI TCATGA 1 cut(s) 897
CfoI GCGC 1 cut(s) 131
Cfr13I GGNCC 2 cut(s) 99, 211
CseI GACGC 1 cut(s) 281
Csp6I GTAC 1 cut(s) 926
CviAII CATG 8 cut(s) 103, 117, 167, 503, 633, 834, 839, 898
CviQI GTAC 1 cut(s) 926
DdeI CTNAG 6 cut(s) 18, 44, 79, 137, 588, 685
DinI GGCGCC 1 cut(s) 130
DpnI GATC 5 cut(s) 149, 561, 657, 987, 1047
DpnII GATC 5 cut(s) 147, 559, 655, 985, 1045
Eam1104I CTCTTC 2 cut(s) 717, 899
EarI CTCTTC 2 cut(s) 717, 899
Eco105I TACGTA 1 cut(s) 929
Eco130I CCWWGG 2 cut(s) 166, 644
Eco24I GRGCYC 1 cut(s) 712
Eco47I GGWCC 2 cut(s) 99, 211
Eco81I CCTNAGG 1 cut(s) 18
EcoRII CCWGG 2 cut(s) 460, 690
EcoT14I CCWWGG 2 cut(s) 166, 644
EcoT22I ATGCAT 1 cut(s) 727
EcoT38I GRGCYC 1 cut(s) 712
EgeI GGCGCC 1 cut(s) 130
EheI GGCGCC 1 cut(s) 130
ErhI CCWWGG 2 cut(s) 166, 644
FaeI CATG 8 cut(s) 106, 120, 170, 506, 636, 837, 842, 901
FaqI GGGAC 1 cut(s) 224
FatI CATG 8 cut(s) 102, 116, 166, 502, 632, 833, 838, 897
FauNDI CATATG 1 cut(s) 71
Fnu4HI GCNGC 2 cut(s) 624, 941
FokI GGATG 2 cut(s) 582, 734
FriOI GRGCYC 1 cut(s) 712
Fsp4HI GCNGC 2 cut(s) 624, 941
FspBI CTAG 4 cut(s) 201, 620, 645, 983
GlaI GCGC 1 cut(s) 130
GluI GCNGC 2 cut(s) 624, 941
GsuI CTGGAG 1 cut(s) 294
HaeII RGCGCY 1 cut(s) 132
HaeIII GGCC 1 cut(s) 465
HapII CCGG 1 cut(s) 787
HgaI GACGC 1 cut(s) 281
HhaI GCGC 1 cut(s) 131
Hin1I GRCGYC 1 cut(s) 129
Hin1II CATG 8 cut(s) 106, 120, 170, 506, 636, 837, 842, 901
Hin6I GCGC 1 cut(s) 129
HinP1I GCGC 1 cut(s) 129
HinfI GANTC 5 cut(s) 113, 424, 592, 821, 1009
HpaII CCGG 1 cut(s) 787
HphI GGTGA 2 cut(s) 167, 923
Hpy166II GTNNAC 1 cut(s) 998
Hpy188I TCNGA 2 cut(s) 7, 477
Hpy188III TCNNGA 6 cut(s) 20, 415, 735, 870, 898, 1006
Hpy8I GTNNAC 1 cut(s) 998
Hpy99I CGWCG 2 cut(s) 275, 666
HpyAV CCTTC 1 cut(s) 461
HpyCH4III ACNGT 2 cut(s) 481, 731
HpyCH4IV ACGT 2 cut(s) 664, 928
HpyCH4V TGCA 5 cut(s) 75, 87, 259, 626, 725
HpyF10VI GCNNNNNNNGC 2 cut(s) 126, 518
HpyF3I CTNAG 6 cut(s) 18, 44, 79, 137, 588, 685
HpySE526I ACGT 2 cut(s) 664, 928
Hsp92I GRCGYC 1 cut(s) 129
Hsp92II CATG 8 cut(s) 106, 120, 170, 506, 636, 837, 842, 901
HspAI GCGC 1 cut(s) 129
KasI GGCGCC 1 cut(s) 128
Kzo9I GATC 5 cut(s) 147, 559, 655, 985, 1045
LguI GCTCTTC 2 cut(s) 717, 899
Lsp1109I GCAGC 2 cut(s) 610, 952
LweI GCATC 5 cut(s) 213, 484, 508, 712, 789
MaeI CTAG 4 cut(s) 201, 620, 645, 983
MaeII ACGT 2 cut(s) 664, 928
MaeIII GTNAC 4 cut(s) 319, 404, 445, 669
MalI GATC 5 cut(s) 149, 561, 657, 987, 1047
MbiI CCGCTC 1 cut(s) 909
MboI GATC 5 cut(s) 147, 559, 655, 985, 1045
MboII GAAGA 5 cut(s) 5, 704, 916, 968, 1067
MflI RGATCY 1 cut(s) 985
MhlI GDGCHC 1 cut(s) 712
MluCI AATT 3 cut(s) 151, 971, 1001
Mly113I GGCGCC 1 cut(s) 129
MlyI GAGTC 2 cut(s) 107, 601
Mph1103I ATGCAT 1 cut(s) 727
MseI TTAA 5 cut(s) 108, 156, 702, 828, 936
MspCI CTTAAG 1 cut(s) 935
MspI CCGG 1 cut(s) 787
MspR9I CCNGG 3 cut(s) 462, 692, 788
MvaI CCWGG 2 cut(s) 462, 692
MvnI CGCG 1 cut(s) 348
MwoI GCNNNNNNNGC 2 cut(s) 126, 518
NarI GGCGCC 1 cut(s) 129
NciI CCSGG 1 cut(s) 788
NcoI CCATGG 1 cut(s) 166
NdeI CATATG 1 cut(s) 71
NdeII GATC 5 cut(s) 147, 559, 655, 985, 1045
NlaIII CATG 8 cut(s) 106, 120, 170, 506, 636, 837, 842, 901
NlaIV GGNNCC 2 cut(s) 130, 212
NsiI ATGCAT 1 cut(s) 727
PagI TCATGA 1 cut(s) 897
PciSI GCTCTTC 2 cut(s) 717, 899
PfeI GAWTC 3 cut(s) 424, 821, 1009
PfoI TCCNGGA 1 cut(s) 786
PkrI GCNGC 2 cut(s) 625, 942
PleI GAGTC 2 cut(s) 107, 600
PluTI GGCGCC 1 cut(s) 132
PpsI GAGTC 2 cut(s) 107, 600
Ppu21I YACGTR 1 cut(s) 929
Psp6I CCWGG 2 cut(s) 460, 690
PspGI CCWGG 2 cut(s) 460, 690
PspN4I GGNNCC 2 cut(s) 130, 212
PspPI GGNCC 2 cut(s) 99, 211
PstI CTGCAG 1 cut(s) 628
PstNI CAGNNNCTG 1 cut(s) 317
PsuI RGATCY 1 cut(s) 985
RsaI GTAC 1 cut(s) 927
RsaNI GTAC 1 cut(s) 926
SapI GCTCTTC 2 cut(s) 717, 899
SaqAI TTAA 5 cut(s) 108, 156, 702, 828, 936
SatI GCNGC 2 cut(s) 624, 941
Sau3AI GATC 5 cut(s) 147, 559, 655, 985, 1045
Sau96I GGNCC 2 cut(s) 99, 211
SchI GAGTC 2 cut(s) 107, 601
ScrFI CCNGG 3 cut(s) 462, 692, 788
SduI GDGCHC 1 cut(s) 712
SfaNI GCATC 5 cut(s) 213, 484, 508, 712, 789
SfcI CTRYAG 1 cut(s) 624
SfoI GGCGCC 1 cut(s) 130
SinI GGWCC 2 cut(s) 99, 211
SmlI CTYRAG 1 cut(s) 935
SmoI CTYRAG 1 cut(s) 935
SnaBI TACGTA 1 cut(s) 929
Sse9I AATT 3 cut(s) 151, 971, 1001
SsiI CCGC 2 cut(s) 346, 909
SspDI GGCGCC 1 cut(s) 128
SspI AATATT 1 cut(s) 1034
SspMI CTAG 4 cut(s) 201, 620, 645, 983
StyD4I CCNGG 3 cut(s) 460, 690, 786
StyI CCWWGG 2 cut(s) 166, 644
TaaI ACNGT 2 cut(s) 481, 731
TaiI ACGT 2 cut(s) 667, 931
TaqI TCGA 2 cut(s) 555, 595
TasI AATT 3 cut(s) 151, 971, 1001
TfiI GAWTC 3 cut(s) 424, 821, 1009
Tru1I TTAA 5 cut(s) 108, 156, 702, 828, 936
Tru9I TTAA 5 cut(s) 108, 156, 702, 828, 936
TscAI CASTG 1 cut(s) 781
TseI GCWGC 2 cut(s) 623, 940
TspDTI ATGAA 5 cut(s) 813, 886, 984, 1068, 1098
TspGWI ACGGA 1 cut(s) 338
TspRI CASTG 1 cut(s) 781
Vha464I CTTAAG 1 cut(s) 935
VpaK11BI GGWCC 2 cut(s) 99, 211
XcmI CCANNNNNNNNNTGG 1 cut(s) 61
XmaJI CCTAGG 1 cut(s) 644
XspI CTAG 4 cut(s) 201, 620, 645, 983
Zsp2I ATGCAT 1 cut(s) 727
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.