Prupe.1G172300_v2.0.a1

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000068
Physical Location & Seq
Forward (+)
14400968 .. 14402172
1205 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G172300.1

Sequence Viewer

Length: 1149 bp
ATGGACTCCACATCTTCGTCGAAACTCACCTACATTCCTGAAGAAATTGTACGTGAAATCCTCCTGAGGTTGCCGGCCAAATCTTTAGTCATGTGCATTGCGGTGTGCAAGTCATGGAGTTTTCTGATCAAAAGATGTAACTTCATTGACGCCCATCTCAGCCGCAAATTATCATTCCAATCCAACCACCAAATCGTCGATGGTTGTCAAGTTCTTGTGCTGGAAAATCACACCAAGTTGAACTTGTTGTCATGTTATGGGGATATCCTTTTCCATAACCCTGCGTTACCTGGTGGTGCTGCTGACTATATTACCGAGCTTATGAATCCGCCAATTTCAAACGAAAACACTGGTTTTGACATGGTCCAAACTCGTAACGGGCTTATATGCCTTACTTGTTCTAAGGATGATGACATAGCTGCGACTGACATCTTTCTTTGGAACCCTTCAATTAGAAGGTATGTGGTGTTGCCTAGGCCTAATTTTATTGTATATCTAAAAAATTATTATAACATTGTTCGTCACTACTTTGGCTATGATTCTCACACCAACGACTATAAGGTTTTGAGATGTGTGAGTAATCATTCTACCCTAGTTGCGGTTGAGATTTATTCCTTAGCCAGGGGCTCCTGGAAAACCCTTACCGCGTCAGCTCCTACATATTTTGGGTTTGGCGCTGCTACATGGCCTTTCTCTTACTGGGCTGTTGTCAATGATGCGCTCATTGGCACTGAATTGTTTGGCGAGATAATGATGCCTCAAGGTGTGAGAAAAATAGAACATCGATACGTGGACAGCAACGTCTGGATGTCAAAACATAAGGGGTCCGTTGCCTTGCTCGAGTGTAGCAATATGTTCACCCAAAATTCTGAGACTCAACTTCACTTGTGGGTCATGGAAGAGTATGGTGTAGTGGAATCCTGGACCAAATTGTATACTTATTCAATGGCAGAGTATTTTCTATTCTCTCTTGGTTTTAACATCAGTCACGAACATGTGTTTATGCTTGAGATCCGTAAAACTCTACCTCCATCTCCACTGAAGAACCTTGGCATTGGGGAGAGCCAGAAAACTCATCGAGGGGACATATTGAATTTTTTTGTAGAGAGCCTTGTCTTACTTGGCCACCCCAATGCCATTTCCTACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

383

Amino Acids

43.56

Weight (kDa)

6.53

Isoelectric Point (pI)

36.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 510
AasI GACNNNNNNGTC 1 cut(s) 800
AccI GTMKAC 1 cut(s) 935
AccII CGCG 1 cut(s) 647
AciI CCGC 5 cut(s) 101, 163, 329, 599, 645
AclWI GGATC 1 cut(s) 1006
AcoI YGGCCR 2 cut(s) 75, 1123
AcsI RAATTY 2 cut(s) 865, 1093
AcuI CTGAAG 2 cut(s) 60, 1061
AcyI GRCGYC 1 cut(s) 150
AfaI GTAC 1 cut(s) 51
AfiI CCNNNNNNNGG 2 cut(s) 598, 621
AflIII ACRYGT 1 cut(s) 994
AgsI TTSAA 5 cut(s) 241, 339, 450, 945, 1093
AjnI CCWGG 4 cut(s) 289, 620, 629, 920
AluBI AGCT 3 cut(s) 319, 419, 653
AluI AGCT 3 cut(s) 319, 419, 653
Alw26I GTCTC 1 cut(s) 866
AlwI GGATC 1 cut(s) 1006
Ama87I CYCGRG 1 cut(s) 839
AoxI GGCC 4 cut(s) 75, 476, 686, 1123
ApeKI GCWGC 3 cut(s) 299, 419, 677
ApoI RAATTY 2 cut(s) 865, 1093
ArsI GACNNNNNNTTYG 2 cut(s) 72, 104
AspA2I CCTAGG 1 cut(s) 473
AspLEI GCGC 2 cut(s) 677, 721
AspS9I GGNCC 3 cut(s) 364, 825, 924
AsuHPI GGTGA 2 cut(s) 19, 850
AvaI CYCGRG 1 cut(s) 839
AvaII GGWCC 3 cut(s) 364, 825, 924
AvrII CCTAGG 1 cut(s) 473
AxyI CCTNAGG 1 cut(s) 65
BalI TGGCCA 1 cut(s) 1125
BanII GRGCYC 1 cut(s) 629
BarI GAAGNNNNNNTAC 2 cut(s) 33, 65
BbvI GCAGC 3 cut(s) 286, 406, 664
BccI CCATC 3 cut(s) 162, 194, 1039
BciT130I CCWGG 4 cut(s) 291, 622, 631, 922
BclI TGATCA 1 cut(s) 126
BcoDI GTCTC 1 cut(s) 866
BfaI CTAG 3 cut(s) 474, 593, 1147
BfoI RGCGCY 1 cut(s) 678
BisI GCNGC 4 cut(s) 163, 300, 420, 678
BlnI CCTAGG 1 cut(s) 473
BlsI GCNGC 4 cut(s) 164, 301, 421, 679
Bme1390I CCNGG 4 cut(s) 291, 622, 631, 922
Bme18I GGWCC 3 cut(s) 364, 825, 924
BmeT110I CYCGRG 1 cut(s) 839
BmgT120I GGNCC 3 cut(s) 364, 825, 924
BmiI GGNNCC 3 cut(s) 443, 628, 826
BmrFI CCNGG 4 cut(s) 291, 622, 631, 922
BmrI ACTGGG 1 cut(s) 709
BmsI GCATC 2 cut(s) 706, 744
BmuI ACTGGG 1 cut(s) 709
Bpu10I CCTNAGC 1 cut(s) 616
BpuEI CTTGAG 2 cut(s) 744, 1028
Bsa29I ATCGAT 1 cut(s) 784
BsaAI YACGTR 2 cut(s) 53, 790
BsaHI GRCGYC 1 cut(s) 150
BsaJI CCNNGG 3 cut(s) 473, 621, 1048
BsaXI ACNNNNNCTCC 2 cut(s) 1012, 1042
Bsc4I CCNNNNNNNGG 2 cut(s) 598, 621
Bse118I RCCGGY 1 cut(s) 73
Bse1I ACTGG 2 cut(s) 355, 704
Bse21I CCTNAGG 1 cut(s) 65
Bse3DI GCAATG 1 cut(s) 96
BseBI CCWGG 4 cut(s) 291, 622, 631, 922
BseCI ATCGAT 1 cut(s) 784
BseDI CCNNGG 3 cut(s) 473, 621, 1048
BseGI GGATG 2 cut(s) 412, 813
BseLI CCNNNNNNNGG 2 cut(s) 598, 621
BseMI GCAATG 1 cut(s) 96
BseMII CTCAG 3 cut(s) 56, 172, 861
BseNI ACTGG 2 cut(s) 355, 704
BseXI GCAGC 3 cut(s) 286, 406, 664
Bsh1236I CGCG 1 cut(s) 647
BshFI GGCC 4 cut(s) 77, 478, 688, 1125
BshVI ATCGAT 1 cut(s) 784
BsiHKCI CYCGRG 1 cut(s) 839
BsiSI CCGG 1 cut(s) 74
BslFI GGGAC 1 cut(s) 1097
BslI CCNNNNNNNGG 2 cut(s) 598, 621
BsmAI GTCTC 1 cut(s) 866
BsmFI GGGAC 1 cut(s) 1097
BsnI GGCC 4 cut(s) 77, 478, 688, 1125
BsoBI CYCGRG 1 cut(s) 839
Bsp1286I GDGCHC 1 cut(s) 629
Bsp143I GATC 2 cut(s) 126, 1011
BspACI CCGC 5 cut(s) 101, 163, 329, 599, 645
BspANI GGCC 4 cut(s) 77, 478, 688, 1125
BspCNI CTCAG 3 cut(s) 57, 171, 862
BspDI ATCGAT 1 cut(s) 784
BspFNI CGCG 1 cut(s) 647
BspLI GGNNCC 3 cut(s) 443, 628, 826
BspPI GGATC 1 cut(s) 1006
BsrDI GCAATG 1 cut(s) 96
BsrFI RCCGGY 1 cut(s) 73
BsrI ACTGG 2 cut(s) 355, 704
BssAI RCCGGY 1 cut(s) 73
BssECI CCNNGG 3 cut(s) 473, 621, 1048
BssMI GATC 2 cut(s) 126, 1011
BssNAI GTATAC 1 cut(s) 936
BssNI GRCGYC 1 cut(s) 150
BssT1I CCWWGG 2 cut(s) 473, 1048
Bst1107I GTATAC 1 cut(s) 936
Bst2UI CCWGG 4 cut(s) 291, 622, 631, 922
Bst6I CTCTTC 1 cut(s) 894
BstACI GRCGYC 1 cut(s) 150
BstBAI YACGTR 2 cut(s) 53, 790
BstC8I GCNNGC 1 cut(s) 75
BstDEI CTNAG 5 cut(s) 65, 158, 402, 616, 870
BstENI CCTNNNNNAGG 1 cut(s) 619
BstF5I GGATG 2 cut(s) 412, 813
BstFNI CGCG 1 cut(s) 647
BstH2I RGCGCY 1 cut(s) 678
BstHHI GCGC 2 cut(s) 677, 721
BstKTI GATC 2 cut(s) 129, 1014
BstMAI GTCTC 1 cut(s) 866
BstMBI GATC 2 cut(s) 126, 1011
BstNI CCWGG 4 cut(s) 291, 622, 631, 922
BstNSI RCATGY 1 cut(s) 998
BstSCI CCNGG 4 cut(s) 289, 620, 629, 920
BstUI CGCG 1 cut(s) 647
BstV1I GCAGC 3 cut(s) 286, 406, 664
BstX2I RGATCY 1 cut(s) 1011
BstYI RGATCY 1 cut(s) 1011
BstZ17I GTATAC 1 cut(s) 936
Bsu15I ATCGAT 1 cut(s) 784
Bsu36I CCTNAGG 1 cut(s) 65
BsuRI GGCC 4 cut(s) 77, 478, 688, 1125
BsuTUI ATCGAT 1 cut(s) 784
BtsCI GGATG 2 cut(s) 412, 813
BtsIMutI CAGTG 3 cut(s) 348, 729, 1037
Cac8I GCNNGC 1 cut(s) 75
CfoI GCGC 2 cut(s) 677, 721
Cfr10I RCCGGY 1 cut(s) 73
Cfr13I GGNCC 3 cut(s) 364, 825, 924
ClaI ATCGAT 1 cut(s) 784
CseI GACGC 2 cut(s) 158, 636
CsiI ACCWGGT 1 cut(s) 289
Csp6I GTAC 1 cut(s) 50
CviAII CATG 7 cut(s) 91, 114, 252, 361, 684, 895, 995
CviQI GTAC 1 cut(s) 50
DdeI CTNAG 5 cut(s) 65, 158, 402, 616, 870
DpnI GATC 2 cut(s) 128, 1013
DpnII GATC 2 cut(s) 126, 1011
DrdI GACNNNNNNGTC 1 cut(s) 800
DseDI GACNNNNNNGTC 1 cut(s) 800
EaeI YGGCCR 2 cut(s) 75, 1123
Eam1104I CTCTTC 1 cut(s) 894
EarI CTCTTC 1 cut(s) 894
EciI GGCGGA 1 cut(s) 318
Eco130I CCWWGG 2 cut(s) 473, 1048
Eco147I AGGCCT 1 cut(s) 478
Eco24I GRGCYC 1 cut(s) 629
Eco32I GATATC 1 cut(s) 265
Eco47I GGWCC 3 cut(s) 364, 825, 924
Eco57I CTGAAG 2 cut(s) 60, 1061
Eco81I CCTNAGG 1 cut(s) 65
Eco88I CYCGRG 1 cut(s) 839
EcoNI CCTNNNNNAGG 1 cut(s) 619
EcoRII CCWGG 4 cut(s) 289, 620, 629, 920
EcoRV GATATC 1 cut(s) 265
EcoT14I CCWWGG 2 cut(s) 473, 1048
EcoT38I GRGCYC 1 cut(s) 629
ErhI CCWWGG 2 cut(s) 473, 1048
FaeI CATG 7 cut(s) 94, 117, 255, 364, 687, 898, 998
FalI AAGNNNNNCTT 2 cut(s) 227, 259
FaqI GGGAC 1 cut(s) 1097
FatI CATG 7 cut(s) 90, 113, 251, 360, 683, 894, 994
FbaI TGATCA 1 cut(s) 126
FblI GTMKAC 1 cut(s) 935
Fnu4HI GCNGC 4 cut(s) 163, 300, 420, 678
FokI GGATG 2 cut(s) 419, 820
FriOI GRGCYC 1 cut(s) 629
Fsp4HI GCNGC 4 cut(s) 163, 300, 420, 678
FspBI CTAG 3 cut(s) 474, 593, 1147
GlaI GCGC 2 cut(s) 676, 720
GluI GCNGC 4 cut(s) 163, 300, 420, 678
HaeII RGCGCY 1 cut(s) 678
HaeIII GGCC 4 cut(s) 77, 478, 688, 1125
HapII CCGG 1 cut(s) 74
HgaI GACGC 2 cut(s) 158, 636
HhaI GCGC 2 cut(s) 677, 721
Hin1I GRCGYC 1 cut(s) 150
Hin1II CATG 7 cut(s) 94, 117, 255, 364, 687, 898, 998
Hin6I GCGC 2 cut(s) 675, 719
HinP1I GCGC 2 cut(s) 675, 719
HinfI GANTC 5 cut(s) 5, 325, 539, 874, 917
HpaII CCGG 1 cut(s) 74
HphI GGTGA 2 cut(s) 19, 850
Hpy166II GTNNAC 3 cut(s) 793, 858, 936
Hpy188I TCNGA 2 cut(s) 126, 871
Hpy188III TCNNGA 4 cut(s) 38, 64, 805, 989
Hpy8I GTNNAC 3 cut(s) 793, 858, 936
Hpy99I CGWCG 2 cut(s) 22, 200
HpyAV CCTTC 2 cut(s) 450, 456
HpyCH4IV ACGT 3 cut(s) 52, 789, 801
HpyCH4V TGCA 2 cut(s) 96, 108
HpyF3I CTNAG 5 cut(s) 65, 158, 402, 616, 870
HpySE526I ACGT 3 cut(s) 52, 789, 801
Hsp92I GRCGYC 1 cut(s) 150
Hsp92II CATG 7 cut(s) 94, 117, 255, 364, 687, 898, 998
HspAI GCGC 2 cut(s) 675, 719
KroI GCCGGC 1 cut(s) 73
KroNI GCCGGC 1 cut(s) 75
Ksp22I TGATCA 1 cut(s) 126
Kzo9I GATC 2 cut(s) 126, 1011
LmnI GCTCC 2 cut(s) 632, 658
Lsp1109I GCAGC 3 cut(s) 286, 406, 664
LweI GCATC 2 cut(s) 706, 744
MabI ACCWGGT 1 cut(s) 289
MaeI CTAG 3 cut(s) 474, 593, 1147
MaeII ACGT 3 cut(s) 52, 789, 801
MaeIII GTNAC 5 cut(s) 137, 285, 374, 521, 986
MalI GATC 2 cut(s) 128, 1013
MboI GATC 2 cut(s) 126, 1011
MboII GAAGA 4 cut(s) 6, 53, 911, 1054
MflI RGATCY 1 cut(s) 1011
MhlI GDGCHC 1 cut(s) 629
MlsI TGGCCA 1 cut(s) 1125
MluNI TGGCCA 1 cut(s) 1125
MlyI GAGTC 1 cut(s) 868
MmeI TCCRAC 1 cut(s) 207
MnlI CCTC 5 cut(s) 60, 71, 768, 1038, 1073
Mox20I TGGCCA 1 cut(s) 1125
MroNI GCCGGC 1 cut(s) 73
MscI TGGCCA 1 cut(s) 1125
MseI TTAA 1 cut(s) 978
MslI CAYNNNNRTG 3 cut(s) 101, 993, 1131
Msp20I TGGCCA 1 cut(s) 1125
MspI CCGG 1 cut(s) 74
MspR9I CCNGG 4 cut(s) 291, 622, 631, 922
MvaI CCWGG 4 cut(s) 291, 622, 631, 922
MvnI CGCG 1 cut(s) 647
NaeI GCCGGC 1 cut(s) 75
NdeII GATC 2 cut(s) 126, 1011
NgoMIV GCCGGC 1 cut(s) 73
NlaIII CATG 7 cut(s) 94, 117, 255, 364, 687, 898, 998
NlaIV GGNNCC 3 cut(s) 443, 628, 826
NmuCI GTSAC 2 cut(s) 521, 986
NspI RCATGY 1 cut(s) 998
PaeR7I CTCGAG 1 cut(s) 839
PceI AGGCCT 1 cut(s) 478
PciI ACATGT 1 cut(s) 994
PdiI GCCGGC 1 cut(s) 75
PfeI GAWTC 3 cut(s) 325, 539, 917
PflFI GACNNNGTC 1 cut(s) 362
PfoI TCCNGGA 2 cut(s) 629, 920
PkrI GCNGC 4 cut(s) 164, 301, 421, 679
PleI GAGTC 1 cut(s) 868
PpsI GAGTC 1 cut(s) 868
Ppu21I YACGTR 2 cut(s) 53, 790
PscI ACATGT 1 cut(s) 994
PsiI TTATAA 1 cut(s) 510
Psp6I CCWGG 4 cut(s) 289, 620, 629, 920
PspGI CCWGG 4 cut(s) 289, 620, 629, 920
PspN4I GGNNCC 3 cut(s) 443, 628, 826
PspPI GGNCC 3 cut(s) 364, 825, 924
PspXI VCTCGAGB 1 cut(s) 839
PsuI RGATCY 1 cut(s) 1011
PsyI GACNNNGTC 1 cut(s) 362
RsaI GTAC 1 cut(s) 51
RsaNI GTAC 1 cut(s) 50
RseI CAYNNNNRTG 3 cut(s) 101, 993, 1131
SaqAI TTAA 1 cut(s) 978
SatI GCNGC 4 cut(s) 163, 300, 420, 678
Sau3AI GATC 2 cut(s) 126, 1011
Sau96I GGNCC 3 cut(s) 364, 825, 924
SchI GAGTC 1 cut(s) 868
ScrFI CCNGG 4 cut(s) 291, 622, 631, 922
SduI GDGCHC 1 cut(s) 629
SexAI ACCWGGT 1 cut(s) 289
SfaNI GCATC 2 cut(s) 706, 744
Sfr274I CTCGAG 1 cut(s) 839
SinI GGWCC 3 cut(s) 364, 825, 924
SlaI CTCGAG 1 cut(s) 839
SmiMI CAYNNNNRTG 3 cut(s) 101, 993, 1131
SmlI CTYRAG 3 cut(s) 759, 839, 1007
SmoI CTYRAG 3 cut(s) 759, 839, 1007
SseBI AGGCCT 1 cut(s) 478
SsiI CCGC 5 cut(s) 101, 163, 329, 599, 645
SspMI CTAG 3 cut(s) 474, 593, 1147
StuI AGGCCT 1 cut(s) 478
StyD4I CCNGG 4 cut(s) 289, 620, 629, 920
StyI CCWWGG 2 cut(s) 473, 1048
TaiI ACGT 3 cut(s) 55, 792, 804
TaqI TCGA 5 cut(s) 20, 198, 784, 840, 1078
TauI GCSGC 1 cut(s) 165
TfiI GAWTC 3 cut(s) 325, 539, 917
Tru1I TTAA 1 cut(s) 978
Tru9I TTAA 1 cut(s) 978
TscAI CASTG 3 cut(s) 355, 736, 1044
TseFI GTSAC 2 cut(s) 521, 986
TseI GCWGC 3 cut(s) 299, 419, 677
Tsp45I GTSAC 2 cut(s) 521, 986
TspDTI ATGAA 2 cut(s) 133, 338
TspGWI ACGGA 2 cut(s) 817, 1004
TspRI CASTG 3 cut(s) 355, 736, 1044
Tth111I GACNNNGTC 1 cut(s) 362
VpaK11BI GGWCC 3 cut(s) 364, 825, 924
XagI CCTNNNNNAGG 1 cut(s) 619
XapI RAATTY 2 cut(s) 865, 1093
XceI RCATGY 1 cut(s) 998
XcmI CCANNNNNNNNNTGG 1 cut(s) 197
XhoI CTCGAG 1 cut(s) 839
XmaJI CCTAGG 1 cut(s) 473
XmiI GTMKAC 1 cut(s) 935
XspI CTAG 3 cut(s) 474, 593, 1147
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.