FvH4_3g18911

F-box kelch-repeat protein At3g23880-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000068
Physical Location & Seq
Forward (+)
12150057 .. 12152869
2813 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g18911.t1

Sequence Viewer

Length: 1359 bp
ATGCAGGGTTTAAGGCAAGCAACGGCGCTTTCTCTTCACTCACTCTCAGGTCTCTCAGTCTCCTTCAAAATGTGGGAGGATTGCGATGAAGGTAAGTCTCAGCTGACCCCTGCATCCATCTCTAAGCTTTGTTTGTCTATCAATCATGTCTTCCAAAGTTGGCTCGATTCTCTCCCTCAAGAACTCATACCCGACATCCTAATCAGACTACCCATCAAATCCCTCATCAAATTCACCTCTGTCTCTAAATCCTGGAACTCCGCCATCAAACACCCAACCTTCATCCGCACCCACCTCACCCACACTCTCAATTCCACTCACCAAAACTCCACCCACCTCATTCTCATACACAATGTCTCCAATGAAGGCACTTCCAAGCACAATTATGGAGAAGTTCCCCTTTCCGGGTTTAAAGAAAACTCTTACTCTCTGCATTATGACAACACTGCTGTTACTGAGCATTGCAAGATTGAGTTTCCAATAGCTCTTAAGCAAATGATGAAGAATCCCTGTTTTCGCGTTGCGGGTACTTGTAATGGGCTTGTTTTACTTGCTGATGATGTATGCCGTGATGCTTACAACTTTGTTTTATGGAATCCTAGTATAAGAAAGTATGTGATACTTCCTAAGCCCACTGTTATGTCTTCGACACACGGTAAGCATGAGGCTTCCGTTGGTCTGGGTTATGATGTTATTAATAATGACTATAAGGTTGTGAGAGTGACATTTCTTATGGATATACCTGGTAATGGCTTCAGGACTTTAGTTCAGTACTATTCACTAGCCACAGGCTCTTGGGGCATGCTTCGGGTTCTTCCTCCATGTGTAGTGAATGCCACCAGGGGACAGGTTTTAGTCAATGGGGCACTGCACTGGTTCGCTATCCGTTGGACCGATGATCATAAAATGAATTTCATGGTTATGGGATTTGATGTGGGAAGTGAGTCATTACGAGAGATACTGCTGCCCGAGAGCCTCAACCAGAATGCCTTATTGGAGTTCAAGTTGGGTGCTACAGGAGATAGAAAATCCATTGGTCTGTTTGTGAGGTGTGACACTGAGACTGATAGCTATCTTGATATATGGGTGATGAAGGAGTATTTTGTTCAGAAGTCGTGGACCAAATTGATGATTCTCACTCCACAAGGTCCGGAAAGAAGTTTGTCCAAGCCAATTTGTTTTAGGAGGAGTGGTCATGAAGTGGTGTTGCAACTTGAAGATGACCATGGATTGGTTTCACTTGACATTGTGAGCAAACAGTTCAAAAGTTTCGGGATTTCTGCAGGTCTGGTTTGTTCTGTTGACTCGTATGAAGAGAGCCTTGTCTTGCTTGACAGGGAAAATGCAATTTCTTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

453

Amino Acids

50.85

Weight (kDa)

6.98

Isoelectric Point (pI)

31.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 55 - 95 2.3e-08 F-box domain
F-box-like PF12937 55 - 95 5.1e-06 F-box-like
FBA_3 PF08268 166 - 384 2.1e-20 F-box associated beta propeller domain
b-prop_At3g26010-like PF24750 169 - 422 1.1e-10 F-box protein At3g26010-like, beta-propeller
FBA_1 PF07734 170 - 442 3.4e-23 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1274
AccB7I CCANNNNNTGG 1 cut(s) 1231
AccII CGCG 1 cut(s) 519
AccIII TCCGGA 1 cut(s) 1150
AciI CCGC 3 cut(s) 261, 286, 524
AcsI RAATTY 2 cut(s) 230, 910
AcuI CTGAAG 1 cut(s) 739
AfaI GTAC 2 cut(s) 529, 773
AfiI CCNNNNNNNGG 4 cut(s) 404, 405, 749, 1231
AflII CTTAAG 1 cut(s) 488
AgsI TTSAA 4 cut(s) 67, 1003, 1217, 1264
AjnI CCWGG 3 cut(s) 251, 742, 839
AjuI GAANNNNNNNTTGG 2 cut(s) 977, 1009
AluBI AGCT 4 cut(s) 103, 127, 485, 1071
AluI AGCT 4 cut(s) 103, 127, 485, 1071
Alw26I GTCTC 6 cut(s) 56, 64, 102, 247, 361, 1055
Ama87I CYCGRG 1 cut(s) 968
Aor13HI TCCGGA 1 cut(s) 1150
ApeKI GCWGC 1 cut(s) 964
ApoI RAATTY 2 cut(s) 230, 910
AseI ATTAAT 1 cut(s) 696
AspLEI GCGC 1 cut(s) 28
AspS9I GGNCC 3 cut(s) 891, 1119, 1148
AsuC2I CCSGG 1 cut(s) 406
AsuHPI GGTGA 4 cut(s) 226, 289, 311, 1099
AvaI CYCGRG 1 cut(s) 968
AvaII GGWCC 3 cut(s) 891, 1119, 1148
BaeGI GKGCMC 1 cut(s) 868
BbsI GAAGAC 2 cut(s) 142, 636
BbvI GCAGC 1 cut(s) 951
BccI CCATC 3 cut(s) 125, 221, 272
BceAI ACGGC 2 cut(s) 39, 552
BciT130I CCWGG 3 cut(s) 253, 744, 841
BclI TGATCA 1 cut(s) 898
BcnI CCSGG 1 cut(s) 406
BcoDI GTCTC 6 cut(s) 56, 64, 102, 247, 361, 1055
BfaI CTAG 2 cut(s) 600, 782
BfmI CTRYAG 2 cut(s) 1014, 1281
BfoI RGCGCY 1 cut(s) 29
BfrI CTTAAG 1 cut(s) 488
BfuAI ACCTGC 1 cut(s) 1274
BisI GCNGC 1 cut(s) 965
BlsI GCNGC 1 cut(s) 966
BmcAI AGTACT 1 cut(s) 773
Bme1390I CCNGG 4 cut(s) 253, 406, 744, 841
Bme18I GGWCC 3 cut(s) 891, 1119, 1148
BmeT110I CYCGRG 1 cut(s) 968
BmgT120I GGNCC 3 cut(s) 891, 1119, 1148
BmrFI CCNGG 4 cut(s) 253, 406, 744, 841
BmsI GCATC 2 cut(s) 122, 562
BpiI GAAGAC 2 cut(s) 142, 636
Bpu10I CCTNAGC 1 cut(s) 627
BpuEI CTTGAG 1 cut(s) 162
BpuMI CCSGG 1 cut(s) 406
BsaBI GATNNNNATC 1 cut(s) 1071
BsaI GGTCTC 1 cut(s) 56
BsaJI CCNNGG 2 cut(s) 840, 1225
BsaWI WCCGGW 1 cut(s) 1150
BsaXI ACNNNNNCTCC 8 cut(s) 311, 341, 341, 371, 989, 1019, 1177, 1207
Bsc4I CCNNNNNNNGG 4 cut(s) 404, 405, 749, 1231
Bse1I ACTGG 1 cut(s) 878
Bse3DI GCAATG 1 cut(s) 460
Bse8I GATNNNNATC 1 cut(s) 1071
BseAI TCCGGA 1 cut(s) 1150
BseBI CCWGG 3 cut(s) 253, 744, 841
BseDI CCNNGG 2 cut(s) 840, 1225
BseGI GGATG 3 cut(s) 113, 195, 282
BseJI GATNNNNATC 1 cut(s) 1071
BseLI CCNNNNNNNGG 4 cut(s) 404, 405, 749, 1231
BseMI GCAATG 1 cut(s) 460
BseMII CTCAG 5 cut(s) 60, 69, 113, 447, 1050
BseNI ACTGG 1 cut(s) 878
BseRI GAGGAG 1 cut(s) 1201
BseSI GKGCMC 1 cut(s) 868
BseXI GCAGC 1 cut(s) 951
BsgI GTGCAG 1 cut(s) 854
Bsh1236I CGCG 1 cut(s) 519
BsiHKCI CYCGRG 1 cut(s) 968
BsiSI CCGG 2 cut(s) 405, 1151
BslFI GGGAC 1 cut(s) 858
BslI CCNNNNNNNGG 4 cut(s) 404, 405, 749, 1231
BsmAI GTCTC 6 cut(s) 56, 64, 102, 247, 361, 1055
BsmFI GGGAC 1 cut(s) 858
BsmI GAATGC 2 cut(s) 838, 991
Bso31I GGTCTC 1 cut(s) 56
BsoBI CYCGRG 1 cut(s) 968
Bsp1286I GDGCHC 1 cut(s) 868
Bsp13I TCCGGA 1 cut(s) 1150
Bsp143I GATC 1 cut(s) 898
Bsp19I CCATGG 1 cut(s) 1225
BspACI CCGC 3 cut(s) 261, 286, 524
BspCNI CTCAG 5 cut(s) 59, 68, 112, 448, 1051
BspEI TCCGGA 1 cut(s) 1150
BspFNI CGCG 1 cut(s) 519
BspHI TCATGA 1 cut(s) 1195
BspMAI CTGCAG 1 cut(s) 1285
BspMI ACCTGC 1 cut(s) 1274
BspTI CTTAAG 1 cut(s) 488
BspTNI GGTCTC 1 cut(s) 56
BsrDI GCAATG 1 cut(s) 460
BsrI ACTGG 1 cut(s) 878
BssECI CCNNGG 2 cut(s) 840, 1225
BssMI GATC 1 cut(s) 898
BssT1I CCWWGG 1 cut(s) 1225
Bst2UI CCWGG 3 cut(s) 253, 744, 841
Bst4CI ACNGT 3 cut(s) 637, 656, 1260
Bst6I CTCTTC 2 cut(s) 39, 1308
BstAFI CTTAAG 1 cut(s) 488
BstC8I GCNNGC 2 cut(s) 18, 803
BstDEI CTNAG 7 cut(s) 46, 55, 99, 123, 456, 627, 1059
BstDSI CCRYGG 1 cut(s) 1225
BstF5I GGATG 3 cut(s) 113, 195, 282
BstFNI CGCG 1 cut(s) 519
BstH2I RGCGCY 1 cut(s) 29
BstHHI GCGC 1 cut(s) 28
BstKTI GATC 1 cut(s) 901
BstMAI GTCTC 6 cut(s) 56, 64, 102, 247, 361, 1055
BstMBI GATC 1 cut(s) 898
BstMWI GCNNNNNNNGC 1 cut(s) 798
BstNI CCWGG 3 cut(s) 253, 744, 841
BstNSI RCATGY 1 cut(s) 805
BstSCI CCNGG 4 cut(s) 251, 404, 742, 839
BstSFI CTRYAG 2 cut(s) 1014, 1281
BstSLI GKGCMC 1 cut(s) 868
BstUI CGCG 1 cut(s) 519
BstV1I GCAGC 1 cut(s) 951
BstV2I GAAGAC 2 cut(s) 142, 636
BtgI CCRYGG 1 cut(s) 1225
BtgZI GCGATG 1 cut(s) 99
BtsCI GGATG 3 cut(s) 113, 195, 282
BtsI GCAGTG 2 cut(s) 444, 866
BtsIMutI CAGTG 5 cut(s) 444, 633, 866, 871, 1056
BveI ACCTGC 1 cut(s) 1274
Cac8I GCNNGC 2 cut(s) 18, 803
CciI TCATGA 1 cut(s) 1195
CfoI GCGC 1 cut(s) 28
Cfr13I GGNCC 3 cut(s) 891, 1119, 1148
CsiI ACCWGGT 1 cut(s) 742
Csp6I GTAC 2 cut(s) 528, 772
CviAII CATG 7 cut(s) 146, 662, 802, 822, 916, 1196, 1226
CviQI GTAC 2 cut(s) 528, 772
DdeI CTNAG 7 cut(s) 46, 55, 99, 123, 456, 627, 1059
DpnI GATC 1 cut(s) 900
DpnII GATC 1 cut(s) 898
DraI TTTAAA 1 cut(s) 412
Eam1104I CTCTTC 2 cut(s) 39, 1308
EarI CTCTTC 2 cut(s) 39, 1308
EciI GGCGGA 1 cut(s) 250
Eco130I CCWWGG 1 cut(s) 1225
Eco31I GGTCTC 1 cut(s) 56
Eco47I GGWCC 3 cut(s) 891, 1119, 1148
Eco57I CTGAAG 1 cut(s) 739
Eco88I CYCGRG 1 cut(s) 968
EcoRII CCWGG 3 cut(s) 251, 742, 839
EcoT14I CCWWGG 1 cut(s) 1225
ErhI CCWWGG 1 cut(s) 1225
FaeI CATG 7 cut(s) 149, 665, 805, 825, 919, 1199, 1229
FalI AAGNNNNNCTT 4 cut(s) 384, 416, 1305, 1337
FaqI GGGAC 1 cut(s) 858
FatI CATG 7 cut(s) 145, 661, 801, 821, 915, 1195, 1225
FauI CCCGC 1 cut(s) 517
FbaI TGATCA 1 cut(s) 898
Fnu4HI GCNGC 1 cut(s) 965
FokI GGATG 3 cut(s) 100, 182, 269
Fsp4HI GCNGC 1 cut(s) 965
FspBI CTAG 2 cut(s) 600, 782
GlaI GCGC 1 cut(s) 27
GluI GCNGC 1 cut(s) 965
HaeII RGCGCY 1 cut(s) 29
HapII CCGG 2 cut(s) 405, 1151
HhaI GCGC 1 cut(s) 28
Hin1II CATG 7 cut(s) 149, 665, 805, 825, 919, 1199, 1229
Hin6I GCGC 1 cut(s) 26
HinP1I GCGC 1 cut(s) 26
HincII GTYRAC 1 cut(s) 1303
HindII GTYRAC 1 cut(s) 1303
HindIII AAGCTT 1 cut(s) 125
HinfI GANTC 6 cut(s) 167, 505, 595, 944, 1132, 1304
HpaII CCGG 2 cut(s) 405, 1151
HphI GGTGA 4 cut(s) 226, 289, 311, 1099
Hpy166II GTNNAC 2 cut(s) 1119, 1303
Hpy188I TCNGA 2 cut(s) 206, 1110
Hpy188III TCNNGA 6 cut(s) 179, 757, 1076, 1151, 1196, 1273
Hpy8I GTNNAC 2 cut(s) 1119, 1303
HpyAV CCTTC 5 cut(s) 73, 83, 289, 359, 1087
HpyCH4III ACNGT 3 cut(s) 637, 656, 1260
HpyCH4V TGCA 8 cut(s) 4, 113, 433, 465, 871, 1210, 1283, 1346
HpyF10VI GCNNNNNNNGC 1 cut(s) 798
HpyF3I CTNAG 7 cut(s) 46, 55, 99, 123, 456, 627, 1059
Hsp92II CATG 7 cut(s) 149, 665, 805, 825, 919, 1199, 1229
HspAI GCGC 1 cut(s) 26
Kpn2I TCCGGA 1 cut(s) 1150
Ksp22I TGATCA 1 cut(s) 898
Kzo9I GATC 1 cut(s) 898
Lsp1109I GCAGC 1 cut(s) 951
LweI GCATC 2 cut(s) 122, 562
MabI ACCWGGT 1 cut(s) 742
MaeI CTAG 2 cut(s) 600, 782
MaeIII GTNAC 3 cut(s) 451, 721, 1052
MalI GATC 1 cut(s) 900
MboI GATC 1 cut(s) 898
MboII GAAGA 7 cut(s) 26, 142, 514, 636, 806, 1229, 1325
MhlI GDGCHC 1 cut(s) 868
MluCI AATT 7 cut(s) 230, 310, 382, 910, 1124, 1173, 1347
MlyI GAGTC 2 cut(s) 953, 1298
MmeI TCCRAC 1 cut(s) 869
MroI TCCGGA 1 cut(s) 1150
MseI TTAA 4 cut(s) 11, 411, 489, 696
MslI CAYNNNNRTG 3 cut(s) 384, 638, 920
MspA1I CMGCKG 1 cut(s) 103
MspCI CTTAAG 1 cut(s) 488
MspI CCGG 2 cut(s) 405, 1151
MspR9I CCNGG 4 cut(s) 253, 406, 744, 841
Mva1269I GAATGC 2 cut(s) 838, 991
MvaI CCWGG 3 cut(s) 253, 744, 841
MvnI CGCG 1 cut(s) 519
MwoI GCNNNNNNNGC 1 cut(s) 798
NciI CCSGG 1 cut(s) 406
NcoI CCATGG 1 cut(s) 1225
NdeII GATC 1 cut(s) 898
NlaIII CATG 7 cut(s) 149, 665, 805, 825, 919, 1199, 1229
NmuCI GTSAC 2 cut(s) 721, 1052
NspI RCATGY 1 cut(s) 805
PaeI GCATGC 1 cut(s) 805
PagI TCATGA 1 cut(s) 1195
PctI GAATGC 2 cut(s) 838, 991
PfeI GAWTC 4 cut(s) 167, 505, 595, 1132
PflMI CCANNNNNTGG 1 cut(s) 1231
PfoI TCCNGGA 1 cut(s) 251
PkrI GCNGC 1 cut(s) 966
PleI GAGTC 2 cut(s) 952, 1298
PpsI GAGTC 2 cut(s) 952, 1298
PshBI ATTAAT 1 cut(s) 696
Psp6I CCWGG 3 cut(s) 251, 742, 839
PspGI CCWGG 3 cut(s) 251, 742, 839
PspPI GGNCC 3 cut(s) 891, 1119, 1148
PstI CTGCAG 1 cut(s) 1285
PvuII CAGCTG 1 cut(s) 103
RsaI GTAC 2 cut(s) 529, 773
RsaNI GTAC 2 cut(s) 528, 772
RseI CAYNNNNRTG 3 cut(s) 384, 638, 920
SaqAI TTAA 4 cut(s) 11, 411, 489, 696
SatI GCNGC 1 cut(s) 965
Sau3AI GATC 1 cut(s) 898
Sau96I GGNCC 3 cut(s) 891, 1119, 1148
ScaI AGTACT 1 cut(s) 773
SchI GAGTC 2 cut(s) 953, 1298
ScrFI CCNGG 4 cut(s) 253, 406, 744, 841
SduI GDGCHC 1 cut(s) 868
SexAI ACCWGGT 1 cut(s) 742
SfaNI GCATC 2 cut(s) 122, 562
SfcI CTRYAG 2 cut(s) 1014, 1281
SinI GGWCC 3 cut(s) 891, 1119, 1148
SmiMI CAYNNNNRTG 3 cut(s) 384, 638, 920
SmlI CTYRAG 2 cut(s) 177, 488
SmoI CTYRAG 2 cut(s) 177, 488
SphI GCATGC 1 cut(s) 805
Sse9I AATT 7 cut(s) 230, 310, 382, 910, 1124, 1173, 1347
SsiI CCGC 3 cut(s) 261, 286, 524
SspMI CTAG 2 cut(s) 600, 782
StyD4I CCNGG 4 cut(s) 251, 404, 742, 839
StyI CCWWGG 1 cut(s) 1225
TaaI ACNGT 3 cut(s) 637, 656, 1260
TaqI TCGA 2 cut(s) 165, 647
TaqII GACCGA 1 cut(s) 908
TasI AATT 7 cut(s) 230, 310, 382, 910, 1124, 1173, 1347
TatI WGTACW 1 cut(s) 771
TfiI GAWTC 4 cut(s) 167, 505, 595, 1132
Tru1I TTAA 4 cut(s) 11, 411, 489, 696
Tru9I TTAA 4 cut(s) 11, 411, 489, 696
TscAI CASTG 5 cut(s) 451, 640, 873, 878, 1063
TseFI GTSAC 2 cut(s) 721, 1052
TseI GCWGC 1 cut(s) 964
Tsp45I GTSAC 2 cut(s) 721, 1052
TspDTI ATGAA 9 cut(s) 102, 271, 378, 515, 904, 923, 1106, 1212, 1326
TspGWI ACGGA 2 cut(s) 661, 875
TspRI CASTG 5 cut(s) 451, 640, 873, 878, 1063
Van91I CCANNNNNTGG 1 cut(s) 1231
Vha464I CTTAAG 1 cut(s) 488
VpaK11BI GGWCC 3 cut(s) 891, 1119, 1148
VspI ATTAAT 1 cut(s) 696
XapI RAATTY 2 cut(s) 230, 910
XceI RCATGY 1 cut(s) 805
XspI CTAG 2 cut(s) 600, 782
ZrmI AGTACT 1 cut(s) 773
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.