RchiOBHm_Chr5g0075881

F-box kelch-repeat protein At3g23880-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000068
Physical Location & Seq
Forward (+)
81623394 .. 81626169
2776 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ35058

Sequence Viewer

Length: 1245 bp
ATGTCAGACTATCTTCCTCAGGAAGTCATAACCAATATATTACTTAGACTACCCAGTAAATCTTTGGTCATATGCACCTCAGTCTGCAAGTTATGGAGGTCCATGATTAAAGACTCGAGCTTTATTGGCGCCCACCTCAGCCGCATGATCAATTTTAACAACCACCATGGCACTCACCTCCTACTACTTCACAGGTTTTCTAGCATCAGGGACCACGTGAGTTCAGTCCACGGGGTAAAAGAGGAGGTTTACTCTTTGCATTATGATAACAATGCTTTTGATGATTGCTGTGAGACAGGATTTCAATCTCCAATTGCTGATACGGAAATGCATAATGAGTGTTTCCGCGTGGTTGGTGTTTGTAATGGGCTGGTGTGCCTCGCAGATGATTTACAATGCTATGGCTACAACTTCTTGATATGGAATCCCTCTATAAGAAAGTTAGTAACCCTTCCCAAGCCTGGCCTTACCTTTCAGACTGTTGGTGGGTATGATGCTTATCACGGGTTCGCGTTTGATGCTATTACCAATGACTATAAGGTTGTGAGGCTTGTCGAGGATCAATATGGATGGAATGACGAACAAACTGAGAATCGAACTTTTGTGGAGATTTATTCCCTAACTGCAGGCTCATGGAGTAGTCCTAGGTTTGTTGATCCCCGACCTTCGTTACTTGGAGAACGCTCAGCCCAGGCTTTTGTTAATGGGGCTCTTCATTGGGATGCATACGGTTTGGGAAGTAAGCTACATTATATATTGGCATTTGATGTGGGCAGTGAGTTATTCCGGGAGATAATGATGCCAAAGAGTTTGGATTGGGATTCATTTAAGTCATGGCATGGAGACTTGTCATTGCGATTGTCTGTTTCGGGAGATGGAAAATCCCTTGCTCTGTTCATGAGGTATGATGATGGTTATATAAATCCCAATTCTTTACTGGATGTATGGGTAATGAAAGAGTATTGTGTGGAGGAGTCGTGGACCAAATTGGTAACTCTCCGGCCACAAGGTCCACAAAGAAGTTTACCTAGAGCTTTATGTTTTAGGAAGAGCGGTGAAGTAGTAATGGTACGTAATCTTAAGCAGCATTATGGAGGAGAAGAAGCTATAAATGAATTAGTTTCGCTAGATCTTGTGAGTGGACAATTCAAGAATCTTGGGATTTGTGGATATAAATATTACACCATTGATCCTTATGAAGAAAGCATTGTCTTACTTAACAAGAATGAAGCAGTTTCTTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

414

Amino Acids

47.08

Weight (kDa)

5.69

Isoelectric Point (pI)

40.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 4 - 40 4.7e-08 F-box-like
F-box PF00646 5 - 41 1.7e-08 F-box domain
FBA_1 PF07734 82 - 340 2.3e-19 F-box associated beta propeller domain
FBA_3 PF08268 108 - 358 5.1e-18 F-box associated beta propeller domain
b-prop_At3g26010-like PF24750 115 - 258 2.3e-07 F-box protein At3g26010-like, beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 128
AccBSI CCGCTC 1 cut(s) 1053
AccII CGCG 2 cut(s) 348, 512
AciI CCGC 3 cut(s) 142, 346, 1053
AclWI GGATC 3 cut(s) 567, 650, 1184
AcoI YGGCCR 1 cut(s) 1001
AcvI CACGTG 1 cut(s) 217
AcyI GRCGYC 1 cut(s) 129
AfaI GTAC 1 cut(s) 1071
AfiI CCNNNNNNNGG 1 cut(s) 461
AflII CTTAAG 1 cut(s) 1079
AgsI TTSAA 2 cut(s) 305, 1150
AjnI CCWGG 2 cut(s) 460, 690
AluBI AGCT 4 cut(s) 120, 745, 1034, 1106
AluI AGCT 4 cut(s) 120, 745, 1034, 1106
Alw26I GTCTC 2 cut(s) 287, 837
AlwI GGATC 3 cut(s) 567, 650, 1184
Ama87I CYCGRG 1 cut(s) 115
AoxI GGCC 2 cut(s) 463, 1001
ApeKI GCWGC 1 cut(s) 1084
AspA2I CCTAGG 1 cut(s) 644
AspLEI GCGC 1 cut(s) 131
AspS9I GGNCC 4 cut(s) 99, 211, 981, 1010
AsuC2I CCSGG 1 cut(s) 788
AsuHPI GGTGA 2 cut(s) 167, 1067
AvaI CYCGRG 1 cut(s) 115
AvaII GGWCC 4 cut(s) 99, 211, 981, 1010
AvrII CCTAGG 1 cut(s) 644
AxyI CCTNAGG 1 cut(s) 18
BanI GGYRCC 1 cut(s) 128
BanII GRGCYC 1 cut(s) 712
BbrPI CACGTG 1 cut(s) 217
BbvCI CCTCAGC 1 cut(s) 137
BbvI GCAGC 1 cut(s) 1096
BccI CCATC 3 cut(s) 564, 869, 905
BciT130I CCWGG 2 cut(s) 462, 692
BclI TGATCA 1 cut(s) 147
BcnI CCSGG 1 cut(s) 788
BcoDI GTCTC 2 cut(s) 287, 837
BfaI CTAG 4 cut(s) 201, 645, 1029, 1127
BfmI CTRYAG 1 cut(s) 624
BfoI RGCGCY 1 cut(s) 132
BfrI CTTAAG 1 cut(s) 1079
BglII AGATCT 1 cut(s) 1129
BisI GCNGC 2 cut(s) 142, 1085
BlnI CCTAGG 1 cut(s) 644
BlpI GCTNAGC 1 cut(s) 685
BlsI GCNGC 2 cut(s) 143, 1086
Bme1390I CCNGG 3 cut(s) 462, 692, 788
Bme18I GGWCC 4 cut(s) 99, 211, 981, 1010
BmeT110I CYCGRG 1 cut(s) 115
BmgT120I GGNCC 4 cut(s) 99, 211, 981, 1010
BmiI GGNNCC 2 cut(s) 130, 212
BmrFI CCNGG 3 cut(s) 462, 692, 788
BmrI ACTGGG 1 cut(s) 48
BmsI GCATC 5 cut(s) 213, 484, 508, 712, 789
BmuI ACTGGG 1 cut(s) 48
BplI GAGNNNNNCTC 2 cut(s) 236, 268
Bpu10I CCTNAGC 1 cut(s) 137
Bpu1102I GCTNAGC 1 cut(s) 685
BpuMI CCSGG 1 cut(s) 788
BsaAI YACGTR 2 cut(s) 217, 1073
BsaBI GATNNNNATC 2 cut(s) 304, 498
BsaHI GRCGYC 1 cut(s) 129
BsaJI CCNNGG 4 cut(s) 166, 229, 644, 690
BsaXI ACNNNNNCTCC 2 cut(s) 962, 992
Bsc4I CCNNNNNNNGG 1 cut(s) 461
Bse1I ACTGG 2 cut(s) 54, 942
Bse21I CCTNAGG 1 cut(s) 18
Bse3DI GCAATG 1 cut(s) 851
Bse8I GATNNNNATC 2 cut(s) 304, 498
BseBI CCWGG 2 cut(s) 462, 692
BseDI CCNNGG 4 cut(s) 166, 229, 644, 690
BseGI GGATG 3 cut(s) 575, 727, 946
BseJI GATNNNNATC 2 cut(s) 304, 498
BseLI CCNNNNNNNGG 1 cut(s) 461
BseMI GCAATG 1 cut(s) 851
BseMII CTCAG 5 cut(s) 32, 93, 151, 579, 699
BseNI ACTGG 2 cut(s) 54, 942
BseRI GAGGAG 3 cut(s) 257, 986, 1110
BseXI GCAGC 1 cut(s) 1096
Bsh1236I CGCG 2 cut(s) 348, 512
BshFI GGCC 2 cut(s) 465, 1003
BshNI GGYRCC 1 cut(s) 128
BsiHKCI CYCGRG 1 cut(s) 115
BsiSI CCGG 2 cut(s) 787, 1000
BslFI GGGAC 1 cut(s) 224
BslI CCNNNNNNNGG 1 cut(s) 461
BsmAI GTCTC 2 cut(s) 287, 837
BsmFI GGGAC 1 cut(s) 224
BsnI GGCC 2 cut(s) 465, 1003
BsoBI CYCGRG 1 cut(s) 115
Bsp1286I GDGCHC 1 cut(s) 712
Bsp143I GATC 5 cut(s) 147, 559, 655, 1129, 1189
Bsp1720I GCTNAGC 1 cut(s) 685
Bsp19I CCATGG 1 cut(s) 166
BspACI CCGC 3 cut(s) 142, 346, 1053
BspANI GGCC 2 cut(s) 465, 1003
BspCNI CTCAG 5 cut(s) 31, 92, 150, 580, 698
BspFNI CGCG 2 cut(s) 348, 512
BspHI TCATGA 1 cut(s) 897
BspLI GGNNCC 2 cut(s) 130, 212
BspMAI CTGCAG 1 cut(s) 628
BspPI GGATC 3 cut(s) 567, 650, 1184
BspQI GCTCTTC 2 cut(s) 717, 1043
BspT107I GGYRCC 1 cut(s) 128
BspTI CTTAAG 1 cut(s) 1079
BsrBI CCGCTC 1 cut(s) 1053
BsrDI GCAATG 1 cut(s) 851
BsrI ACTGG 2 cut(s) 54, 942
BssECI CCNNGG 4 cut(s) 166, 229, 644, 690
BssMI GATC 5 cut(s) 147, 559, 655, 1129, 1189
BssNI GRCGYC 1 cut(s) 129
BssT1I CCWWGG 2 cut(s) 166, 644
Bst2UI CCWGG 2 cut(s) 462, 692
Bst4CI ACNGT 2 cut(s) 481, 731
Bst6I CTCTTC 2 cut(s) 717, 1043
BstACI GRCGYC 1 cut(s) 129
BstAFI CTTAAG 1 cut(s) 1079
BstBAI YACGTR 2 cut(s) 217, 1073
BstC8I GCNNGC 1 cut(s) 628
BstDEI CTNAG 6 cut(s) 18, 44, 79, 137, 588, 685
BstDSI CCRYGG 2 cut(s) 166, 229
BstF5I GGATG 3 cut(s) 575, 727, 946
BstFNI CGCG 2 cut(s) 348, 512
BstH2I RGCGCY 1 cut(s) 132
BstHHI GCGC 1 cut(s) 131
BstKTI GATC 5 cut(s) 150, 562, 658, 1132, 1192
BstMAI GTCTC 2 cut(s) 287, 837
BstMBI GATC 5 cut(s) 147, 559, 655, 1129, 1189
BstMWI GCNNNNNNNGC 2 cut(s) 126, 518
BstNI CCWGG 2 cut(s) 462, 692
BstSCI CCNGG 3 cut(s) 460, 690, 786
BstSFI CTRYAG 1 cut(s) 624
BstSNI TACGTA 1 cut(s) 1073
BstUI CGCG 2 cut(s) 348, 512
BstV1I GCAGC 1 cut(s) 1096
BstX2I RGATCY 1 cut(s) 1129
BstYI RGATCY 1 cut(s) 1129
Bsu36I CCTNAGG 1 cut(s) 18
BsuRI GGCC 2 cut(s) 465, 1003
BtgI CCRYGG 2 cut(s) 166, 229
BtsCI GGATG 3 cut(s) 575, 727, 946
BtsI GCAGTG 1 cut(s) 781
BtsIMutI CAGTG 1 cut(s) 781
Cac8I GCNNGC 1 cut(s) 628
CciI TCATGA 1 cut(s) 897
CfoI GCGC 1 cut(s) 131
Cfr13I GGNCC 4 cut(s) 99, 211, 981, 1010
Csp6I GTAC 1 cut(s) 1070
CviAII CATG 7 cut(s) 103, 145, 167, 633, 834, 839, 898
CviQI GTAC 1 cut(s) 1070
DdeI CTNAG 6 cut(s) 18, 44, 79, 137, 588, 685
DinI GGCGCC 1 cut(s) 130
DpnI GATC 5 cut(s) 149, 561, 657, 1131, 1191
DpnII GATC 5 cut(s) 147, 559, 655, 1129, 1189
EaeI YGGCCR 1 cut(s) 1001
Eam1104I CTCTTC 2 cut(s) 717, 1043
EarI CTCTTC 2 cut(s) 717, 1043
Eco105I TACGTA 1 cut(s) 1073
Eco130I CCWWGG 2 cut(s) 166, 644
Eco24I GRGCYC 1 cut(s) 712
Eco47I GGWCC 4 cut(s) 99, 211, 981, 1010
Eco72I CACGTG 1 cut(s) 217
Eco81I CCTNAGG 1 cut(s) 18
Eco88I CYCGRG 1 cut(s) 115
EcoRII CCWGG 2 cut(s) 460, 690
EcoT14I CCWWGG 2 cut(s) 166, 644
EcoT22I ATGCAT 2 cut(s) 333, 727
EcoT38I GRGCYC 1 cut(s) 712
EgeI GGCGCC 1 cut(s) 130
EheI GGCGCC 1 cut(s) 130
ErhI CCWWGG 2 cut(s) 166, 644
FaeI CATG 7 cut(s) 106, 148, 170, 636, 837, 842, 901
FaqI GGGAC 1 cut(s) 224
FatI CATG 7 cut(s) 102, 144, 166, 632, 833, 838, 897
FauNDI CATATG 1 cut(s) 71
FbaI TGATCA 1 cut(s) 147
Fnu4HI GCNGC 2 cut(s) 142, 1085
FokI GGATG 3 cut(s) 582, 734, 953
FriOI GRGCYC 1 cut(s) 712
Fsp4HI GCNGC 2 cut(s) 142, 1085
FspBI CTAG 4 cut(s) 201, 645, 1029, 1127
GlaI GCGC 1 cut(s) 130
GluI GCNGC 2 cut(s) 142, 1085
HaeII RGCGCY 1 cut(s) 132
HaeIII GGCC 2 cut(s) 465, 1003
HapII CCGG 2 cut(s) 787, 1000
HhaI GCGC 1 cut(s) 131
Hin1I GRCGYC 1 cut(s) 129
Hin1II CATG 7 cut(s) 106, 148, 170, 636, 837, 842, 901
Hin6I GCGC 1 cut(s) 129
HinP1I GCGC 1 cut(s) 129
HinfI GANTC 6 cut(s) 113, 424, 592, 821, 974, 1153
HpaII CCGG 2 cut(s) 787, 1000
HphI GGTGA 2 cut(s) 167, 1067
Hpy166II GTNNAC 6 cut(s) 229, 250, 981, 1013, 1025, 1142
Hpy188I TCNGA 2 cut(s) 7, 477
Hpy188III TCNNGA 5 cut(s) 20, 415, 870, 898, 1150
Hpy8I GTNNAC 6 cut(s) 229, 250, 981, 1013, 1025, 1142
HpyAV CCTTC 2 cut(s) 461, 675
HpyCH4III ACNGT 2 cut(s) 481, 731
HpyCH4IV ACGT 2 cut(s) 216, 1072
HpyCH4V TGCA 6 cut(s) 75, 87, 259, 331, 626, 725
HpyF10VI GCNNNNNNNGC 2 cut(s) 126, 518
HpyF3I CTNAG 6 cut(s) 18, 44, 79, 137, 588, 685
HpySE526I ACGT 2 cut(s) 216, 1072
Hsp92I GRCGYC 1 cut(s) 129
Hsp92II CATG 7 cut(s) 106, 148, 170, 636, 837, 842, 901
HspAI GCGC 1 cut(s) 129
KasI GGCGCC 1 cut(s) 128
Ksp22I TGATCA 1 cut(s) 147
Kzo9I GATC 5 cut(s) 147, 559, 655, 1129, 1189
LguI GCTCTTC 2 cut(s) 717, 1043
Lsp1109I GCAGC 1 cut(s) 1096
LweI GCATC 5 cut(s) 213, 484, 508, 712, 789
MaeI CTAG 4 cut(s) 201, 645, 1029, 1127
MaeII ACGT 2 cut(s) 216, 1072
MaeIII GTNAC 3 cut(s) 445, 669, 991
MalI GATC 5 cut(s) 149, 561, 657, 1131, 1191
MbiI CCGCTC 1 cut(s) 1053
MboI GATC 5 cut(s) 147, 559, 655, 1129, 1189
MboII GAAGA 5 cut(s) 5, 704, 1060, 1112, 1211
MfeI CAATTG 1 cut(s) 312
MflI RGATCY 1 cut(s) 1129
MhlI GDGCHC 1 cut(s) 712
MluCI AATT 6 cut(s) 151, 312, 928, 986, 1115, 1145
Mly113I GGCGCC 1 cut(s) 129
MlyI GAGTC 2 cut(s) 107, 983
Mph1103I ATGCAT 2 cut(s) 333, 727
MseI TTAA 6 cut(s) 108, 156, 702, 828, 1080, 1218
MslI CAYNNNNRTG 1 cut(s) 720
MspCI CTTAAG 1 cut(s) 1079
MspI CCGG 2 cut(s) 787, 1000
MspR9I CCNGG 3 cut(s) 462, 692, 788
MunI CAATTG 1 cut(s) 312
MvaI CCWGG 2 cut(s) 462, 692
MvnI CGCG 2 cut(s) 348, 512
MwoI GCNNNNNNNGC 2 cut(s) 126, 518
NarI GGCGCC 1 cut(s) 129
NciI CCSGG 1 cut(s) 788
NcoI CCATGG 1 cut(s) 166
NdeI CATATG 1 cut(s) 71
NdeII GATC 5 cut(s) 147, 559, 655, 1129, 1189
NlaIII CATG 7 cut(s) 106, 148, 170, 636, 837, 842, 901
NlaIV GGNNCC 2 cut(s) 130, 212
NsiI ATGCAT 2 cut(s) 333, 727
PaeR7I CTCGAG 1 cut(s) 115
PagI TCATGA 1 cut(s) 897
PciSI GCTCTTC 2 cut(s) 717, 1043
PfeI GAWTC 4 cut(s) 424, 592, 821, 1153
PfoI TCCNGGA 1 cut(s) 786
PkrI GCNGC 2 cut(s) 143, 1086
PleI GAGTC 2 cut(s) 107, 982
PluTI GGCGCC 1 cut(s) 132
PmaCI CACGTG 1 cut(s) 217
PmlI CACGTG 1 cut(s) 217
PpsI GAGTC 2 cut(s) 107, 982
Ppu21I YACGTR 2 cut(s) 217, 1073
Psp6I CCWGG 2 cut(s) 460, 690
PspCI CACGTG 1 cut(s) 217
PspGI CCWGG 2 cut(s) 460, 690
PspN4I GGNNCC 2 cut(s) 130, 212
PspPI GGNCC 4 cut(s) 99, 211, 981, 1010
PspXI VCTCGAGB 1 cut(s) 115
PstI CTGCAG 1 cut(s) 628
PsuI RGATCY 1 cut(s) 1129
RsaI GTAC 1 cut(s) 1071
RsaNI GTAC 1 cut(s) 1070
RseI CAYNNNNRTG 1 cut(s) 720
SapI GCTCTTC 2 cut(s) 717, 1043
SaqAI TTAA 6 cut(s) 108, 156, 702, 828, 1080, 1218
SatI GCNGC 2 cut(s) 142, 1085
Sau3AI GATC 5 cut(s) 147, 559, 655, 1129, 1189
Sau96I GGNCC 4 cut(s) 99, 211, 981, 1010
SchI GAGTC 2 cut(s) 107, 983
ScrFI CCNGG 3 cut(s) 462, 692, 788
SduI GDGCHC 1 cut(s) 712
SfaNI GCATC 5 cut(s) 213, 484, 508, 712, 789
SfcI CTRYAG 1 cut(s) 624
SfoI GGCGCC 1 cut(s) 130
Sfr274I CTCGAG 1 cut(s) 115
SinI GGWCC 4 cut(s) 99, 211, 981, 1010
SlaI CTCGAG 1 cut(s) 115
SmiMI CAYNNNNRTG 1 cut(s) 720
SmlI CTYRAG 2 cut(s) 115, 1079
SmoI CTYRAG 2 cut(s) 115, 1079
SnaBI TACGTA 1 cut(s) 1073
Sse9I AATT 6 cut(s) 151, 312, 928, 986, 1115, 1145
SsiI CCGC 3 cut(s) 142, 346, 1053
SspDI GGCGCC 1 cut(s) 128
SspI AATATT 1 cut(s) 1178
SspMI CTAG 4 cut(s) 201, 645, 1029, 1127
StyD4I CCNGG 3 cut(s) 460, 690, 786
StyI CCWWGG 2 cut(s) 166, 644
TaaI ACNGT 2 cut(s) 481, 731
TaiI ACGT 2 cut(s) 219, 1075
TaqI TCGA 3 cut(s) 116, 555, 595
TasI AATT 6 cut(s) 151, 312, 928, 986, 1115, 1145
TauI GCSGC 1 cut(s) 144
TfiI GAWTC 4 cut(s) 424, 592, 821, 1153
Tru1I TTAA 6 cut(s) 108, 156, 702, 828, 1080, 1218
Tru9I TTAA 6 cut(s) 108, 156, 702, 828, 1080, 1218
TscAI CASTG 1 cut(s) 781
TseI GCWGC 1 cut(s) 1084
TspDTI ATGAA 7 cut(s) 704, 813, 886, 968, 1128, 1212, 1242
TspGWI ACGGA 1 cut(s) 338
TspRI CASTG 1 cut(s) 781
Vha464I CTTAAG 1 cut(s) 1079
VpaK11BI GGWCC 4 cut(s) 99, 211, 981, 1010
XcmI CCANNNNNNNNNTGG 2 cut(s) 61, 934
XhoI CTCGAG 1 cut(s) 115
XmaJI CCTAGG 1 cut(s) 644
XspI CTAG 4 cut(s) 201, 645, 1029, 1127
Zsp2I ATGCAT 2 cut(s) 333, 727
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.