RchiOBHm_Chr6g0284651

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000068
Physical Location & Seq
Reverse (-)
47994541 .. 47995713
1173 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ25527

Sequence Viewer

Length: 1173 bp
ATGGAAGCCCTTCCTGAAGAGATCATAGATGTAATCTTCCTGAGGTTACCCATCAAGTCTTTACTCAAATGTAAAGCAGTGTGCAAGACATGGAACTCTATAATCTCAACCTCTAGTTTCATCGACACCCACCTCCACCTCAACTGCAGAGACGGCCAACTCCTCTTGCTACAGGCTTTTTCATCACCTGCAGATAGGAGGGAGCCTTTCTCGTTGCATCGAGATAACCCTTCGTTCGATGTGTATACCAAGCTTAGAAATCCATTCTTAGCTTACGATAGGACACAAGCTGCTATCTCCAAAAAAAAATCAATAGCTTTAGGTAGTGAGCCTATCAATGTGGTCGGGACTTGTAACGGGCTGGTATGCCTTGTTGCTCGTGACTTTACTGTGTTAATTTGGAACCCTAGTATTCGAAAGTTCGTGGTTTTGGCCAGGCCTAGTGTCACCTTCATCAGGGATGATAACCCTAGAATAAGTTATGCCTTCGGTTATGATTCGTCCACCAATGACTATAAGGTTTTGAGAACTGTGAGTTATGTTCAGGGAGCTCGTTCATGTGAAGTTGAGATTTGGTCATTGGCCCGTGGCTCATGGAAGAGTCTAACTGCTTCCATTGTTATTTCTGGTGACGACGCCCGTTATCCCAAAGCTTTTCTTCATGACACTCATGCTTTTGTCAATGGTGCTCTGCATTGGTTTCATCAGTATAAGATGATAAACTACCACGATTCCATTGTTTCCTTTGATATTTCAAGTGAATCATTTGGCGAAATGACAATGCCTGCATTCTGGGGAAATAGAGAGATTTGCTTAATTTCAAGATACAGGGACTCCCTTGCTTTCTTTGAACAAGAATTTACTGATGTATTTCGTCTTGGCGTATTTCGTCTTAGCATGTGGGTCATGGAAGAGTATGGTGTGGCAAACTCCTGCACTATTATTTTCACTATGGACTTCCATCATATAACATATCCATATCCACGGCCGCTATGGTTCAGAAACAGTGGTGATGTAGTGCTCGAGCGCATTCAGGGAGTGCTGAAATCGGTGGATTCTAAGACCAAAAGCACTACTGATTTTCGAATCAATGGGTATGTGTCTTACGACTTTATGGATTATTTTGTAGAAAGCCTTGTATTACTAGACAAACCCAATGCTATTTCATACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

390

Amino Acids

44.79

Weight (kDa)

7.13

Isoelectric Point (pI)

34.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 2 - 38 9.2e-09 F-box-like
F-box PF00646 3 - 40 2.6e-09 F-box domain
FBA_3 PF08268 108 - 310 1.3e-21 F-box associated beta propeller domain
FBA_1 PF07734 109 - 310 2.3e-22 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 196
Acc36I ACCTGC 1 cut(s) 196
AccI GTMKAC 1 cut(s) 245
AciI CCGC 1 cut(s) 989
AcoI YGGCCR 3 cut(s) 154, 432, 986
AcsI RAATTY 1 cut(s) 857
AcuI CTGAAG 1 cut(s) 36
AcyI GRCGYC 1 cut(s) 636
AfiI CCNNNNNNNGG 1 cut(s) 456
AgsI TTSAA 3 cut(s) 756, 822, 851
AjnI CCWGG 1 cut(s) 434
AluBI AGCT 6 cut(s) 253, 272, 290, 317, 551, 653
AluI AGCT 6 cut(s) 253, 272, 290, 317, 551, 653
Alw21I GWGCWC 3 cut(s) 553, 691, 1023
Alw26I GTCTC 1 cut(s) 144
Ama87I CYCGRG 1 cut(s) 1022
AoxI GGCC 5 cut(s) 154, 432, 437, 582, 986
ApeKI GCWGC 1 cut(s) 290
ApoI RAATTY 1 cut(s) 857
Asp700I GAANNNNTTC 1 cut(s) 9
AspLEI GCGC 1 cut(s) 1029
AspS9I GGNCC 1 cut(s) 583
AsuHPI GGTGA 4 cut(s) 177, 439, 641, 1022
AsuII TTCGAA 2 cut(s) 415, 1084
AvaI CYCGRG 1 cut(s) 1022
AxyI CCTNAGG 1 cut(s) 41
BalI TGGCCA 1 cut(s) 434
BanII GRGCYC 1 cut(s) 553
BauI CACGAG 1 cut(s) 378
Bbv12I GWGCWC 3 cut(s) 553, 691, 1023
BbvI GCAGC 1 cut(s) 277
BccI CCATC 2 cut(s) 59, 969
BceAI ACGGC 2 cut(s) 169, 1001
BciT130I CCWGG 1 cut(s) 436
BcoDI GTCTC 1 cut(s) 144
BfaI CTAG 5 cut(s) 114, 408, 441, 471, 1145
BfmI CTRYAG 3 cut(s) 145, 170, 189
BfuAI ACCTGC 1 cut(s) 196
BisI GCNGC 2 cut(s) 291, 989
BlsI GCNGC 2 cut(s) 292, 990
Bme1390I CCNGG 1 cut(s) 436
BmeT110I CYCGRG 1 cut(s) 1022
BmgT120I GGNCC 1 cut(s) 583
BmiI GGNNCC 2 cut(s) 204, 404
BmrFI CCNGG 1 cut(s) 436
BmsI GCATC 1 cut(s) 226
BplI GAGNNNNNCTC 2 cut(s) 194, 226
Bpu14I TTCGAA 2 cut(s) 415, 1084
BsaHI GRCGYC 1 cut(s) 636
BsaJI CCNNGG 2 cut(s) 586, 983
BsaXI ACNNNNNCTCC 2 cut(s) 818, 848
Bsc4I CCNNNNNNNGG 1 cut(s) 456
Bse21I CCTNAGG 1 cut(s) 41
BseBI CCWGG 1 cut(s) 436
BseDI CCNNGG 2 cut(s) 586, 983
BseGI GGATG 1 cut(s) 466
BseLI CCNNNNNNNGG 1 cut(s) 456
BseMII CTCAG 1 cut(s) 32
BseRI GAGGAG 1 cut(s) 152
BseX3I CGGCCG 1 cut(s) 986
BseXI GCAGC 1 cut(s) 277
BsgI GTGCAG 1 cut(s) 919
Bsh1285I CGRYCG 1 cut(s) 989
BshFI GGCC 5 cut(s) 156, 434, 439, 584, 988
BsiEI CGRYCG 1 cut(s) 989
BsiHKAI GWGCWC 3 cut(s) 553, 691, 1023
BsiHKCI CYCGRG 1 cut(s) 1022
BslFI GGGAC 2 cut(s) 361, 845
BslI CCNNNNNNNGG 1 cut(s) 456
BsmAI GTCTC 1 cut(s) 144
BsmBI CGTCTC 1 cut(s) 144
BsmFI GGGAC 2 cut(s) 361, 845
BsmI GAATGC 2 cut(s) 788, 1029
BsnI GGCC 5 cut(s) 156, 434, 439, 584, 988
BsoBI CYCGRG 1 cut(s) 1022
Bsp119I TTCGAA 2 cut(s) 415, 1084
Bsp1286I GDGCHC 3 cut(s) 553, 691, 1023
Bsp143I GATC 1 cut(s) 21
BspACI CCGC 1 cut(s) 989
BspANI GGCC 5 cut(s) 156, 434, 439, 584, 988
BspCNI CTCAG 1 cut(s) 33
BspHI TCATGA 1 cut(s) 661
BspLI GGNNCC 2 cut(s) 204, 404
BspMAI CTGCAG 2 cut(s) 149, 193
BspMI ACCTGC 1 cut(s) 196
BspT104I TTCGAA 2 cut(s) 415, 1084
BssECI CCNNGG 2 cut(s) 586, 983
BssMI GATC 1 cut(s) 21
BssNAI GTATAC 1 cut(s) 246
BssNI GRCGYC 1 cut(s) 636
BssSI CACGAG 1 cut(s) 378
Bst1107I GTATAC 1 cut(s) 246
Bst2BI CACGAG 1 cut(s) 378
Bst2UI CCWGG 1 cut(s) 436
Bst4CI ACNGT 3 cut(s) 391, 532, 1007
Bst6I CTCTTC 3 cut(s) 12, 593, 906
BstACI GRCGYC 1 cut(s) 636
BstBI TTCGAA 2 cut(s) 415, 1084
BstC8I GCNNGC 1 cut(s) 786
BstDEI CTNAG 5 cut(s) 41, 254, 268, 893, 1059
BstDSI CCRYGG 2 cut(s) 586, 983
BstEII GGTNACC 1 cut(s) 45
BstENI CCTNNNNNAGG 1 cut(s) 454
BstF5I GGATG 1 cut(s) 466
BstHHI GCGC 1 cut(s) 1029
BstKTI GATC 1 cut(s) 24
BstMAI GTCTC 1 cut(s) 144
BstMBI GATC 1 cut(s) 21
BstMCI CGRYCG 1 cut(s) 989
BstMWI GCNNNNNNNGC 1 cut(s) 153
BstNI CCWGG 1 cut(s) 436
BstNSI RCATGY 1 cut(s) 901
BstPI GGTNACC 1 cut(s) 45
BstSCI CCNGG 1 cut(s) 434
BstSFI CTRYAG 3 cut(s) 145, 170, 189
BstV1I GCAGC 1 cut(s) 277
BstZ17I GTATAC 1 cut(s) 246
BstZI CGGCCG 1 cut(s) 986
Bsu36I CCTNAGG 1 cut(s) 41
BsuRI GGCC 5 cut(s) 156, 434, 439, 584, 988
BtgI CCRYGG 2 cut(s) 586, 983
BtsCI GGATG 1 cut(s) 466
BtsI GCAGTG 1 cut(s) 84
BtsIMutI CAGTG 2 cut(s) 84, 1012
BveI ACCTGC 1 cut(s) 196
Cac8I GCNNGC 1 cut(s) 786
CciI TCATGA 1 cut(s) 661
CfoI GCGC 1 cut(s) 1029
Cfr13I GGNCC 1 cut(s) 583
CseI GACGC 1 cut(s) 644
CviAII CATG 7 cut(s) 90, 558, 594, 662, 671, 898, 907
DdeI CTNAG 5 cut(s) 41, 254, 268, 893, 1059
DpnI GATC 1 cut(s) 23
DpnII GATC 1 cut(s) 21
EaeI YGGCCR 3 cut(s) 154, 432, 986
EagI CGGCCG 1 cut(s) 986
Eam1104I CTCTTC 3 cut(s) 12, 593, 906
EarI CTCTTC 3 cut(s) 12, 593, 906
Ecl136II GAGCTC 1 cut(s) 551
EclXI CGGCCG 1 cut(s) 986
Eco147I AGGCCT 1 cut(s) 439
Eco24I GRGCYC 1 cut(s) 553
Eco52I CGGCCG 1 cut(s) 986
Eco53kI GAGCTC 1 cut(s) 551
Eco57I CTGAAG 1 cut(s) 36
Eco81I CCTNAGG 1 cut(s) 41
Eco88I CYCGRG 1 cut(s) 1022
Eco91I GGTNACC 1 cut(s) 45
EcoICRI GAGCTC 1 cut(s) 551
EcoNI CCTNNNNNAGG 1 cut(s) 454
EcoO65I GGTNACC 1 cut(s) 45
EcoRII CCWGG 1 cut(s) 434
EcoT38I GRGCYC 1 cut(s) 553
Esp3I CGTCTC 1 cut(s) 144
FaeI CATG 7 cut(s) 93, 561, 597, 665, 674, 901, 910
FalI AAGNNNNNCTT 2 cut(s) 642, 674
FaqI GGGAC 2 cut(s) 361, 845
FatI CATG 7 cut(s) 89, 557, 593, 661, 670, 897, 906
FblI GTMKAC 1 cut(s) 245
Fnu4HI GCNGC 2 cut(s) 291, 989
FokI GGATG 1 cut(s) 473
FriOI GRGCYC 1 cut(s) 553
Fsp4HI GCNGC 2 cut(s) 291, 989
FspBI CTAG 5 cut(s) 114, 408, 441, 471, 1145
GlaI GCGC 1 cut(s) 1028
GluI GCNGC 2 cut(s) 291, 989
HaeIII GGCC 5 cut(s) 156, 434, 439, 584, 988
HgaI GACGC 1 cut(s) 644
HhaI GCGC 1 cut(s) 1029
Hin1I GRCGYC 1 cut(s) 636
Hin1II CATG 7 cut(s) 93, 561, 597, 665, 674, 901, 910
Hin6I GCGC 1 cut(s) 1027
HinP1I GCGC 1 cut(s) 1027
HindIII AAGCTT 2 cut(s) 251, 651
HinfI GANTC 7 cut(s) 497, 601, 731, 761, 833, 1055, 1086
HphI GGTGA 4 cut(s) 177, 439, 641, 1022
Hpy166II GTNNAC 2 cut(s) 246, 504
Hpy188I TCNGA 1 cut(s) 1001
Hpy188III TCNNGA 7 cut(s) 14, 40, 221, 346, 380, 662, 822
Hpy8I GTNNAC 2 cut(s) 246, 504
Hpy99I CGWCG 1 cut(s) 638
HpyAV CCTTC 4 cut(s) 20, 240, 460, 496
HpyCH4III ACNGT 3 cut(s) 391, 532, 1007
HpyCH4V TGCA 7 cut(s) 84, 147, 191, 217, 694, 788, 936
HpyF10VI GCNNNNNNNGC 1 cut(s) 153
HpyF3I CTNAG 5 cut(s) 41, 254, 268, 893, 1059
Hsp92I GRCGYC 1 cut(s) 636
Hsp92II CATG 7 cut(s) 93, 561, 597, 665, 674, 901, 910
HspAI GCGC 1 cut(s) 1027
Kzo9I GATC 1 cut(s) 21
LmnI GCTCC 2 cut(s) 202, 548
Lsp1109I GCAGC 1 cut(s) 277
LweI GCATC 1 cut(s) 226
MaeI CTAG 5 cut(s) 114, 408, 441, 471, 1145
MaeIII GTNAC 5 cut(s) 45, 353, 380, 445, 629
MalI GATC 1 cut(s) 23
MboI GATC 1 cut(s) 21
MboII GAAGA 5 cut(s) 28, 29, 610, 650, 923
MhlI GDGCHC 3 cut(s) 553, 691, 1023
MlsI TGGCCA 1 cut(s) 434
MluCI AATT 3 cut(s) 396, 816, 857
MluNI TGGCCA 1 cut(s) 434
MlyI GAGTC 2 cut(s) 610, 827
MnlI CCTC 6 cut(s) 36, 121, 143, 149, 173, 192
Mox20I TGGCCA 1 cut(s) 434
MroXI GAANNNNTTC 1 cut(s) 9
MscI TGGCCA 1 cut(s) 434
MseI TTAA 2 cut(s) 395, 815
Msp20I TGGCCA 1 cut(s) 434
MspR9I CCNGG 1 cut(s) 436
Mva1269I GAATGC 2 cut(s) 788, 1029
MvaI CCWGG 1 cut(s) 436
MwoI GCNNNNNNNGC 1 cut(s) 153
NdeII GATC 1 cut(s) 21
NlaIII CATG 7 cut(s) 93, 561, 597, 665, 674, 901, 910
NlaIV GGNNCC 2 cut(s) 204, 404
NmuCI GTSAC 3 cut(s) 380, 445, 629
NspI RCATGY 1 cut(s) 901
NspV TTCGAA 2 cut(s) 415, 1084
PaeR7I CTCGAG 1 cut(s) 1022
PagI TCATGA 1 cut(s) 661
PaqCI CACCTGC 1 cut(s) 196
PceI AGGCCT 1 cut(s) 439
PctI GAATGC 2 cut(s) 788, 1029
PdmI GAANNNNTTC 1 cut(s) 9
PfeI GAWTC 5 cut(s) 497, 731, 761, 1055, 1086
PkrI GCNGC 2 cut(s) 292, 990
PleI GAGTC 2 cut(s) 609, 827
PpsI GAGTC 2 cut(s) 609, 827
Psp124BI GAGCTC 1 cut(s) 553
Psp6I CCWGG 1 cut(s) 434
PspEI GGTNACC 1 cut(s) 45
PspGI CCWGG 1 cut(s) 434
PspN4I GGNNCC 2 cut(s) 204, 404
PspPI GGNCC 1 cut(s) 583
PspXI VCTCGAGB 1 cut(s) 1022
PstI CTGCAG 2 cut(s) 149, 193
SacI GAGCTC 1 cut(s) 553
SaqAI TTAA 2 cut(s) 395, 815
SatI GCNGC 2 cut(s) 291, 989
Sau3AI GATC 1 cut(s) 21
Sau96I GGNCC 1 cut(s) 583
SchI GAGTC 2 cut(s) 610, 827
ScrFI CCNGG 1 cut(s) 436
SduI GDGCHC 3 cut(s) 553, 691, 1023
SfaNI GCATC 1 cut(s) 226
SfcI CTRYAG 3 cut(s) 145, 170, 189
Sfr274I CTCGAG 1 cut(s) 1022
SfuI TTCGAA 2 cut(s) 415, 1084
SlaI CTCGAG 1 cut(s) 1022
SmlI CTYRAG 1 cut(s) 1022
SmoI CTYRAG 1 cut(s) 1022
Sse9I AATT 3 cut(s) 396, 816, 857
SseBI AGGCCT 1 cut(s) 439
SsiI CCGC 1 cut(s) 989
SspMI CTAG 5 cut(s) 114, 408, 441, 471, 1145
SstI GAGCTC 1 cut(s) 553
StuI AGGCCT 1 cut(s) 439
StyD4I CCNGG 1 cut(s) 434
TaaI ACNGT 3 cut(s) 391, 532, 1007
TaqI TCGA 6 cut(s) 123, 220, 237, 415, 1023, 1084
TasI AATT 3 cut(s) 396, 816, 857
TauI GCSGC 1 cut(s) 991
TfiI GAWTC 5 cut(s) 497, 731, 761, 1055, 1086
Tru1I TTAA 2 cut(s) 395, 815
Tru9I TTAA 2 cut(s) 395, 815
TscAI CASTG 2 cut(s) 84, 1012
TseFI GTSAC 3 cut(s) 380, 445, 629
TseI GCWGC 1 cut(s) 290
Tsp45I GTSAC 3 cut(s) 380, 445, 629
TspDTI ATGAA 7 cut(s) 109, 171, 442, 546, 650, 692, 1155
TspRI CASTG 2 cut(s) 84, 1012
XagI CCTNNNNNAGG 1 cut(s) 454
XapI RAATTY 1 cut(s) 857
XceI RCATGY 1 cut(s) 901
XcmI CCANNNNNNNNNTGG 1 cut(s) 990
XhoI CTCGAG 1 cut(s) 1022
XmiI GTMKAC 1 cut(s) 245
XmnI GAANNNNTTC 1 cut(s) 9
XspI CTAG 5 cut(s) 114, 408, 441, 471, 1145
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.