Rorug02G0043500

F-box and associated interaction domains-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000068
Physical Location & Seq
Reverse (-)
3406769 .. 3408197
1429 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0043500.1

Sequence Viewer

Length: 1068 bp
ATGAGTTCAACTACTACCCGAAACCTCTCCCATATCGTCCCACTCGACTTCAACTCCATCCACACATTACCCGACTCCCACACTTGGGACTCCTCCACGGACCACCACCCCTTCACAGAACTCGTACCCATCATAGACTTACTCAACCCGAATGCCGCCTCGCTCATACAGCTTGCCTCTGAGCAATGGGGTGTCTTCCAAGTCACCAACCACGGCATTCCAATGAACTTAATCCAAGAAGCGGAGCTACAAGCCCGTGGATTGTTTGAGCTGTCTAGGGACCAAAAACTCCAGGCACTTCGATCACCGGTACCGGAGAGCTTAACCGGTTACGGGCGAGCCCGCATTTCCGCCAACTTCTCAAAGCTGATGTGGTCGGAGAGTTTCACGATGATCGGGTCTCCGCTTGAACATGCGGCTCAGCTCTGGCCAGATGACCACTCGGTCCAAACCTACTTCTGTAATGTAATGGAAGAGTACCAAAAGAAGATGAAGGGCCTATGTGTAAAATTGATAAGGCTGATGCTTGGATCATTGGGCTTGGACCATGAAGATGTTAAATGGCTGAACCGGCCCAAAAAGAGTGGCAGAAATTTTCCACAGGTCTTGCAACTGAACTCGTATCCGGTTTGTCCGGACCCGACCCGAGCCATGGGGTTGGCTCCTCACACAGACTCCTCAATTTTCACAGTGCTAAACCAAAGCAACGTAAGTGGCCTTCAAGTCTTTGAGGATGGGATTGGTTGGGTGCCGGTTCACCCGATCCCCGGTGCACTTGTAGTCAATGTAGGTGATTTGATGCACATACTATCCAACGGCCGGTTCAAGGCTGCAGTGCATCGTGCGGTTGTCAATGAGCTATATCACCGCATCTCCATCGCCTACTTCTACAGCCCACCGTACGACGTGAAGATATCACCGCCGATGAAGTTGATCGACCAAGATCATCCTCCCCTATATCGACCGGTAACTTGGAAGGAATACCTTGGTATCAAAGGAACACATTTCAACAGGGCACTTGATCTAATCAGGAATGACACGGACCAAGCACCATACATGCATGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

355

Amino Acids

40.11

Weight (kDa)

6.37

Isoelectric Point (pI)

43.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 42 - 145 1.9e-16 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 201 - 299 7.4e-33 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 443
Acc65I GGTACC 1 cut(s) 310
AccB1I GGYRCC 2 cut(s) 310, 748
AccIII TCCGGA 1 cut(s) 634
AciI CCGC 9 cut(s) 156, 242, 343, 351, 404, 416, 845, 868, 920
AclWI GGATC 2 cut(s) 538, 757
AcoI YGGCCR 2 cut(s) 428, 817
AcsI RAATTY 1 cut(s) 592
AfaI GTAC 4 cut(s) 126, 312, 479, 902
AfiI CCNNNNNNNGG 8 cut(s) 84, 85, 241, 333, 652, 767, 819, 826
AgeI ACCGGT 3 cut(s) 307, 326, 964
AgsI TTSAA 6 cut(s) 9, 52, 410, 722, 826, 1009
AjiI CACGTC 1 cut(s) 907
AjnI CCWGG 1 cut(s) 291
AjuI GAANNNNNNNTTGG 2 cut(s) 806, 838
AluBI AGCT 7 cut(s) 172, 247, 271, 321, 367, 424, 859
AluI AGCT 7 cut(s) 172, 247, 271, 321, 367, 424, 859
Alw21I GWGCWC 1 cut(s) 775
Alw26I GTCTC 1 cut(s) 405
Alw44I GTGCAC 1 cut(s) 771
AlwI GGATC 2 cut(s) 538, 757
Ama87I CYCGRG 1 cut(s) 645
Aor13HI TCCGGA 1 cut(s) 634
AoxI GGCC 5 cut(s) 428, 496, 572, 715, 817
ApaLI GTGCAC 1 cut(s) 771
ApeKI GCWGC 1 cut(s) 830
ApoI RAATTY 1 cut(s) 592
AsiGI ACCGGT 3 cut(s) 307, 326, 964
Asp718I GGTACC 1 cut(s) 310
AspS9I GGNCC 8 cut(s) 100, 280, 445, 496, 544, 573, 637, 1042
AsuC2I CCSGG 1 cut(s) 768
AsuHPI GGTGA 6 cut(s) 196, 297, 749, 803, 857, 909
AvaI CYCGRG 1 cut(s) 645
AvaII GGWCC 6 cut(s) 100, 280, 445, 544, 637, 1042
BaeGI GKGCMC 2 cut(s) 775, 1018
BaeI ACNNNNGTAYC 2 cut(s) 973, 1006
BalI TGGCCA 1 cut(s) 430
BanI GGYRCC 2 cut(s) 310, 748
BanII GRGCYC 1 cut(s) 343
BarI GAAGNNNNNNTAC 4 cut(s) 231, 263, 702, 734
BbsI GAAGAC 1 cut(s) 187
Bbv12I GWGCWC 1 cut(s) 775
BbvI GCAGC 1 cut(s) 817
BccI CCATC 4 cut(s) 65, 137, 728, 884
BceAI ACGGC 2 cut(s) 229, 832
BcgI CGANNNNNNTGC 2 cut(s) 859, 893
BciT130I CCWGG 1 cut(s) 293
BciVI GTATCC 1 cut(s) 633
BcnI CCSGG 1 cut(s) 768
BcoDI GTCTC 1 cut(s) 405
BfaI CTAG 1 cut(s) 276
BfmI CTRYAG 2 cut(s) 831, 889
BfuI GTATCC 1 cut(s) 633
BisI GCNGC 3 cut(s) 156, 417, 831
BlpI GCTNAGC 1 cut(s) 420
BlsI GCNGC 3 cut(s) 157, 418, 832
Bme1390I CCNGG 2 cut(s) 293, 768
Bme18I GGWCC 6 cut(s) 100, 280, 445, 544, 637, 1042
BmeT110I CYCGRG 1 cut(s) 645
BmgBI CACGTC 1 cut(s) 907
BmgT120I GGNCC 8 cut(s) 100, 280, 445, 496, 544, 573, 637, 1042
BmiI GGNNCC 5 cut(s) 281, 312, 639, 663, 750
BmrFI CCNGG 2 cut(s) 293, 768
BmsI GCATC 4 cut(s) 513, 789, 847, 879
BpiI GAAGAC 1 cut(s) 187
BpmI CTGGAG 1 cut(s) 275
Bpu1102I GCTNAGC 1 cut(s) 420
BpuMI CCSGG 1 cut(s) 768
BsaI GGTCTC 1 cut(s) 405
BsaJI CCNNGG 6 cut(s) 96, 211, 256, 651, 766, 985
BsaWI WCCGGW 6 cut(s) 307, 313, 326, 625, 634, 964
BsaXI ACNNNNNCTCC 6 cut(s) 38, 68, 659, 689, 857, 887
Bsc4I CCNNNNNNNGG 8 cut(s) 84, 85, 241, 333, 652, 767, 819, 826
Bse118I RCCGGY 6 cut(s) 307, 326, 570, 751, 819, 964
Bse3DI GCAATG 1 cut(s) 191
BseAI TCCGGA 1 cut(s) 634
BseBI CCWGG 1 cut(s) 293
BseDI CCNNGG 6 cut(s) 96, 211, 256, 651, 766, 985
BseGI GGATG 3 cut(s) 57, 739, 946
BseLI CCNNNNNNNGG 8 cut(s) 84, 85, 241, 333, 652, 767, 819, 826
BseMI GCAATG 1 cut(s) 191
BseMII CTCAG 2 cut(s) 171, 434
BseRI GAGGAG 3 cut(s) 82, 654, 667
BseSI GKGCMC 2 cut(s) 775, 1018
BseX3I CGGCCG 1 cut(s) 817
BseXI GCAGC 1 cut(s) 817
Bsh1285I CGRYCG 2 cut(s) 820, 965
BshFI GGCC 5 cut(s) 430, 498, 574, 717, 819
BshNI GGYRCC 2 cut(s) 310, 748
BshTI ACCGGT 3 cut(s) 307, 326, 964
BsiEI CGRYCG 2 cut(s) 820, 965
BsiHKAI GWGCWC 1 cut(s) 775
BsiHKCI CYCGRG 1 cut(s) 645
BsiWI CGTACG 1 cut(s) 900
BslFI GGGAC 3 cut(s) 23, 101, 293
BslI CCNNNNNNNGG 8 cut(s) 84, 85, 241, 333, 652, 767, 819, 826
BsmAI GTCTC 1 cut(s) 405
BsmFI GGGAC 3 cut(s) 23, 101, 293
BsmI GAATGC 2 cut(s) 157, 216
BsnI GGCC 5 cut(s) 430, 498, 574, 717, 819
Bso31I GGTCTC 1 cut(s) 405
BsoBI CYCGRG 1 cut(s) 645
Bsp1286I GDGCHC 3 cut(s) 343, 775, 1018
Bsp13I TCCGGA 1 cut(s) 634
Bsp143I GATC 7 cut(s) 302, 393, 530, 762, 933, 943, 1021
Bsp1720I GCTNAGC 1 cut(s) 420
Bsp19I CCATGG 1 cut(s) 651
BspACI CCGC 9 cut(s) 156, 242, 343, 351, 404, 416, 845, 868, 920
BspANI GGCC 5 cut(s) 430, 498, 574, 717, 819
BspCNI CTCAG 2 cut(s) 172, 433
BspEI TCCGGA 1 cut(s) 634
BspLI GGNNCC 5 cut(s) 281, 312, 639, 663, 750
BspMAI CTGCAG 1 cut(s) 835
BspPI GGATC 2 cut(s) 538, 757
BspT107I GGYRCC 2 cut(s) 310, 748
BspTNI GGTCTC 1 cut(s) 405
BsrDI GCAATG 1 cut(s) 191
BsrFI RCCGGY 6 cut(s) 307, 326, 570, 751, 819, 964
BssAI RCCGGY 6 cut(s) 307, 326, 570, 751, 819, 964
BssECI CCNNGG 6 cut(s) 96, 211, 256, 651, 766, 985
BssMI GATC 7 cut(s) 302, 393, 530, 762, 933, 943, 1021
BssT1I CCWWGG 2 cut(s) 651, 985
Bst2UI CCWGG 1 cut(s) 293
Bst4CI ACNGT 2 cut(s) 691, 900
Bst6I CTCTTC 1 cut(s) 468
BstC8I GCNNGC 3 cut(s) 174, 339, 343
BstDEI CTNAG 2 cut(s) 180, 420
BstDSI CCRYGG 4 cut(s) 96, 211, 256, 651
BstF5I GGATG 3 cut(s) 57, 739, 946
BstKTI GATC 7 cut(s) 305, 396, 533, 765, 936, 946, 1024
BstMAI GTCTC 1 cut(s) 405
BstMBI GATC 7 cut(s) 302, 393, 530, 762, 933, 943, 1021
BstMCI CGRYCG 2 cut(s) 820, 965
BstMWI GCNNNNNNNGC 2 cut(s) 169, 571
BstNI CCWGG 1 cut(s) 293
BstNSI RCATGY 2 cut(s) 416, 1060
BstSCI CCNGG 2 cut(s) 291, 766
BstSFI CTRYAG 2 cut(s) 831, 889
BstSLI GKGCMC 2 cut(s) 775, 1018
BstV1I GCAGC 1 cut(s) 817
BstV2I GAAGAC 1 cut(s) 187
BstXI CCANNNNNNTGG 1 cut(s) 658
BstZI CGGCCG 1 cut(s) 817
BsuI GTATCC 1 cut(s) 633
BsuRI GGCC 5 cut(s) 430, 498, 574, 717, 819
BtgI CCRYGG 4 cut(s) 96, 211, 256, 651
BtgZI GCGATG 1 cut(s) 862
BtrI CACGTC 1 cut(s) 907
BtsCI GGATG 3 cut(s) 57, 739, 946
BtsI GCAGTG 1 cut(s) 840
BtsIMutI CAGTG 2 cut(s) 696, 840
Cac8I GCNNGC 3 cut(s) 174, 339, 343
Cfr10I RCCGGY 6 cut(s) 307, 326, 570, 751, 819, 964
Cfr13I GGNCC 8 cut(s) 100, 280, 445, 496, 544, 573, 637, 1042
Csp6I GTAC 4 cut(s) 125, 311, 478, 901
CspAI ACCGGT 3 cut(s) 307, 326, 964
CspCI CAANNNNNGTGG 6 cut(s) 565, 588, 600, 623, 694, 729
CviAII CATG 5 cut(s) 413, 548, 652, 1057, 1061
CviQI GTAC 4 cut(s) 125, 311, 478, 901
DdeI CTNAG 2 cut(s) 180, 420
DpnI GATC 7 cut(s) 304, 395, 532, 764, 935, 945, 1023
DpnII GATC 7 cut(s) 302, 393, 530, 762, 933, 943, 1021
DrdI GACNNNNNNGTC 1 cut(s) 443
DseDI GACNNNNNNGTC 1 cut(s) 443
EaeI YGGCCR 2 cut(s) 428, 817
EagI CGGCCG 1 cut(s) 817
Eam1104I CTCTTC 1 cut(s) 468
EarI CTCTTC 1 cut(s) 468
EciI GGCGGA 1 cut(s) 340
EclXI CGGCCG 1 cut(s) 817
Eco130I CCWWGG 2 cut(s) 651, 985
Eco24I GRGCYC 1 cut(s) 343
Eco31I GGTCTC 1 cut(s) 405
Eco32I GATATC 1 cut(s) 915
Eco47I GGWCC 6 cut(s) 100, 280, 445, 544, 637, 1042
Eco52I CGGCCG 1 cut(s) 817
Eco88I CYCGRG 1 cut(s) 645
EcoO109I RGGNCCY 1 cut(s) 496
EcoRII CCWGG 1 cut(s) 291
EcoRV GATATC 1 cut(s) 915
EcoT14I CCWWGG 2 cut(s) 651, 985
EcoT22I ATGCAT 1 cut(s) 1062
EcoT38I GRGCYC 1 cut(s) 343
ErhI CCWWGG 2 cut(s) 651, 985
FaeI CATG 5 cut(s) 416, 551, 655, 1060, 1064
FaqI GGGAC 3 cut(s) 23, 101, 293
FatI CATG 5 cut(s) 412, 547, 651, 1056, 1060
FauI CCCGC 1 cut(s) 350
Fnu4HI GCNGC 3 cut(s) 156, 417, 831
FokI GGATG 3 cut(s) 44, 746, 933
FriOI GRGCYC 1 cut(s) 343
Fsp4HI GCNGC 3 cut(s) 156, 417, 831
FspBI CTAG 1 cut(s) 276
GluI GCNGC 3 cut(s) 156, 417, 831
GsuI CTGGAG 1 cut(s) 275
HaeIII GGCC 5 cut(s) 430, 498, 574, 717, 819
Hin1II CATG 5 cut(s) 416, 551, 655, 1060, 1064
HinfI GANTC 3 cut(s) 74, 89, 674
HphI GGTGA 6 cut(s) 196, 297, 749, 803, 857, 909
Hpy166II GTNNAC 2 cut(s) 757, 773
Hpy188I TCNGA 2 cut(s) 181, 379
Hpy188III TCNNGA 3 cut(s) 388, 635, 1030
Hpy8I GTNNAC 2 cut(s) 757, 773
Hpy99I CGWCG 1 cut(s) 908
HpyAV CCTTC 4 cut(s) 121, 487, 728, 970
HpyCH4III ACNGT 2 cut(s) 691, 900
HpyCH4IV ACGT 2 cut(s) 708, 906
HpyCH4V TGCA 6 cut(s) 610, 773, 802, 833, 838, 1060
HpyF10VI GCNNNNNNNGC 2 cut(s) 169, 571
HpyF3I CTNAG 2 cut(s) 180, 420
HpySE526I ACGT 2 cut(s) 708, 906
Hsp92II CATG 5 cut(s) 416, 551, 655, 1060, 1064
Kpn2I TCCGGA 1 cut(s) 634
KpnI GGTACC 1 cut(s) 314
Kzo9I GATC 7 cut(s) 302, 393, 530, 762, 933, 943, 1021
LmnI GCTCC 2 cut(s) 244, 667
Lsp1109I GCAGC 1 cut(s) 817
LweI GCATC 4 cut(s) 513, 789, 847, 879
MaeI CTAG 1 cut(s) 276
MaeII ACGT 2 cut(s) 708, 906
MaeIII GTNAC 3 cut(s) 202, 329, 967
MalI GATC 7 cut(s) 304, 395, 532, 764, 935, 945, 1023
MboI GATC 7 cut(s) 302, 393, 530, 762, 933, 943, 1021
MboII GAAGA 5 cut(s) 187, 485, 499, 563, 922
MhlI GDGCHC 3 cut(s) 343, 775, 1018
MlsI TGGCCA 1 cut(s) 430
MluCI AATT 3 cut(s) 509, 592, 681
MluNI TGGCCA 1 cut(s) 430
MlyI GAGTC 3 cut(s) 68, 83, 668
MmeI TCCRAC 2 cut(s) 357, 837
MnlI CCTC 8 cut(s) 35, 103, 169, 187, 675, 688, 724, 960
Mox20I TGGCCA 1 cut(s) 430
Mph1103I ATGCAT 1 cut(s) 1062
MroI TCCGGA 1 cut(s) 634
MscI TGGCCA 1 cut(s) 430
MseI TTAA 3 cut(s) 230, 323, 558
MslI CAYNNNNRTG 2 cut(s) 221, 552
Msp20I TGGCCA 1 cut(s) 430
MspR9I CCNGG 2 cut(s) 293, 768
Mva1269I GAATGC 2 cut(s) 157, 216
MvaI CCWGG 1 cut(s) 293
MwoI GCNNNNNNNGC 2 cut(s) 169, 571
NciI CCSGG 1 cut(s) 768
NcoI CCATGG 1 cut(s) 651
NdeII GATC 7 cut(s) 302, 393, 530, 762, 933, 943, 1021
NlaIII CATG 5 cut(s) 416, 551, 655, 1060, 1064
NlaIV GGNNCC 5 cut(s) 281, 312, 639, 663, 750
NmuCI GTSAC 1 cut(s) 202
NsiI ATGCAT 1 cut(s) 1062
NspI RCATGY 2 cut(s) 416, 1060
PcsI WCGNNNNNNNCGW 1 cut(s) 42
PctI GAATGC 2 cut(s) 157, 216
Pfl23II CGTACG 1 cut(s) 900
PinAI ACCGGT 3 cut(s) 307, 326, 964
PkrI GCNGC 3 cut(s) 157, 418, 832
PleI GAGTC 3 cut(s) 68, 83, 668
PpsI GAGTC 3 cut(s) 68, 83, 668
Psp6I CCWGG 1 cut(s) 291
PspGI CCWGG 1 cut(s) 291
PspLI CGTACG 1 cut(s) 900
PspN4I GGNNCC 5 cut(s) 281, 312, 639, 663, 750
PspPI GGNCC 8 cut(s) 100, 280, 445, 496, 544, 573, 637, 1042
PstI CTGCAG 1 cut(s) 835
RsaI GTAC 4 cut(s) 126, 312, 479, 902
RsaNI GTAC 4 cut(s) 125, 311, 478, 901
RseI CAYNNNNRTG 2 cut(s) 221, 552
SaqAI TTAA 3 cut(s) 230, 323, 558
SatI GCNGC 3 cut(s) 156, 417, 831
Sau3AI GATC 7 cut(s) 302, 393, 530, 762, 933, 943, 1021
Sau96I GGNCC 8 cut(s) 100, 280, 445, 496, 544, 573, 637, 1042
SchI GAGTC 3 cut(s) 68, 83, 668
ScrFI CCNGG 2 cut(s) 293, 768
SduI GDGCHC 3 cut(s) 343, 775, 1018
SfaNI GCATC 4 cut(s) 513, 789, 847, 879
SfcI CTRYAG 2 cut(s) 831, 889
SinI GGWCC 6 cut(s) 100, 280, 445, 544, 637, 1042
SmiMI CAYNNNNRTG 2 cut(s) 221, 552
Sse9I AATT 3 cut(s) 509, 592, 681
SsiI CCGC 9 cut(s) 156, 242, 343, 351, 404, 416, 845, 868, 920
SspMI CTAG 1 cut(s) 276
StyD4I CCNGG 2 cut(s) 291, 766
StyI CCWWGG 2 cut(s) 651, 985
TaaI ACNGT 2 cut(s) 691, 900
TaiI ACGT 2 cut(s) 711, 909
TaqI TCGA 4 cut(s) 45, 301, 936, 961
TaqII GACCGA 1 cut(s) 433
TasI AATT 3 cut(s) 509, 592, 681
TauI GCSGC 2 cut(s) 158, 419
Tru1I TTAA 3 cut(s) 230, 323, 558
Tru9I TTAA 3 cut(s) 230, 323, 558
TscAI CASTG 2 cut(s) 696, 840
TseFI GTSAC 1 cut(s) 202
TseI GCWGC 1 cut(s) 830
Tsp45I GTSAC 1 cut(s) 202
TspDTI ATGAA 4 cut(s) 239, 506, 564, 941
TspGWI ACGGA 2 cut(s) 113, 1055
TspRI CASTG 2 cut(s) 696, 840
VneI GTGCAC 1 cut(s) 771
VpaK11BI GGWCC 6 cut(s) 100, 280, 445, 544, 637, 1042
XapI RAATTY 1 cut(s) 592
XceI RCATGY 2 cut(s) 416, 1060
XspI CTAG 1 cut(s) 276
Zsp2I ATGCAT 1 cut(s) 1062
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.