FvH4_5g11830

F-box and associated interaction domains-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000068
Physical Location & Seq
Forward (+)
6701602 .. 6702753
1152 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g11830.t1

Sequence Viewer

Length: 1101 bp
ATGTCAGGCTACCTTGTTCCTGAAGAAATCATTCATGAAATCCTGCTGTGGTTGCCGGCCAAATCTTTACTGCGATTCAGCACAGTGTGCAAGTCATGGAGCTCTATGATCAACCACCCCAGTTTCATCGACACCCACCTGAAGCGCAGAAACCAACACAACCTCCAAAACGACATTCTTCACCTTCTAACAAGCAAGCGGAAGGATCGGATGAGTTACTCGTCGTGTCTGATCAAAGATGGTGAGTATATGTATACCAACCTTATGCTTCCATCACTATTAGTGAAAGGTATGGGTTTACTTAGTCTGATCGGAACTTGCAATGGCCTCCTATGCTTTGCATATAATAGGGAACCTAATTCTCCCGGAGCACCTCCAACAATAATATTCAACCCTTTAATCAGAAAGATTGTGATTTTGCCTAAGCCTAGTATTATTTGCGACCCTTTTACCCAGTATGAACAACCACACTCATTTGGCTATGATGCCCGGACCAATGACTATAAGGTTTTGAGACTTGTTCTTAAATTCCAAACTCCATACGCCGTGGAGGTTTACTCATTAGCTACGAATTCTTGGAAGCGTCTTAGTAGTGCTGCAATTCCGGCTTACGTTTGGTCAAAATATGGATTCCTTTCCGTCAATAATGCTCTCTATTGGATCCAATACCGTAACGTAAAACGAGAAGAATACGTCATCGTGTCATTTGATTTGGCCACTGAAATGTTCAGCCAGATAATGATGCCTGAAGATTTGGGGAGAAAATCTAATCGATACTTAGACTTGTCAAGATATGGGGAGTCTCTGTCTTTGATTGTTGCTGCAGAAAATATTGAGATATGGGTGATGAAAGAGGTTGGAGTGATGGAATCTTGGAAGCAAGTATTAACCATCAACTGTTCTAAGAATCCGTTGCTTAAAATTCCTAATAGCAGCGGTGAAGTACTATTCAAAACAAGAGAAAGCCCTCGAAAGATGCAGAGGCTGAATTATAAGACCGAACAAGCAGAAGATTTTGGAAAAGATAAGAATTACAACCCCAGGGATTCTTTTGCAGATTGCCTAGTTTTACTTGGCCAAACCAATGCCGTTCCTTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

367

Amino Acids

42.17

Weight (kDa)

9.04

Isoelectric Point (pI)

44.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 7 - 42 3.9e-10 F-box domain
F-box-like PF12937 7 - 41 7.3e-09 F-box-like
FBA_3 PF08268 102 - 298 7.1e-24 F-box associated beta propeller domain
FBA_1 PF07734 104 - 318 9.4e-25 F-box associated beta propeller domain
Beta-prop_AT5G49610-like PF23635 137 - 300 3.8e-08 F-box protein AT5G49610-like, beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 993
AccI GTMKAC 1 cut(s) 254
AciI CCGC 2 cut(s) 199, 936
AclWI GGATC 3 cut(s) 213, 655, 668
AcoI YGGCCR 3 cut(s) 57, 714, 1075
AcsI RAATTY 3 cut(s) 527, 571, 921
AcuI CTGAAG 3 cut(s) 42, 161, 768
AdeI CACNNNGTG 1 cut(s) 87
AfaI GTAC 1 cut(s) 945
AgsI TTSAA 2 cut(s) 391, 952
AjnI CCWGG 1 cut(s) 1040
AjuI GAANNNNNNNTTGG 2 cut(s) 159, 191
AluBI AGCT 2 cut(s) 102, 566
AluI AGCT 2 cut(s) 102, 566
Alw21I GWGCWC 2 cut(s) 104, 373
Alw26I GTCTC 2 cut(s) 508, 807
AlwI GGATC 3 cut(s) 213, 655, 668
AlwNI CAGNNNCTG 1 cut(s) 985
AoxI GGCC 4 cut(s) 57, 325, 714, 1075
ApeKI GCWGC 3 cut(s) 596, 821, 933
ApoI RAATTY 3 cut(s) 527, 571, 921
Asp700I GAANNNNTTC 1 cut(s) 30
AspLEI GCGC 1 cut(s) 147
AspS9I GGNCC 1 cut(s) 492
AsuC2I CCSGG 2 cut(s) 366, 490
AsuHPI GGTGA 4 cut(s) 173, 254, 856, 950
AvaII GGWCC 1 cut(s) 492
BalI TGGCCA 2 cut(s) 716, 1077
BamHI GGATCC 1 cut(s) 660
BanII GRGCYC 1 cut(s) 104
Bbv12I GWGCWC 2 cut(s) 104, 373
BbvI GCAGC 3 cut(s) 583, 808, 945
BccI CCATC 4 cut(s) 233, 280, 859, 899
BceAI ACGGC 2 cut(s) 530, 1073
BciT130I CCWGG 1 cut(s) 1042
BclI TGATCA 2 cut(s) 108, 231
BcnI CCSGG 2 cut(s) 366, 490
BcoDI GTCTC 2 cut(s) 508, 807
BfaI CTAG 2 cut(s) 429, 1064
BfmI CTRYAG 1 cut(s) 822
BisI GCNGC 3 cut(s) 597, 822, 934
BlsI GCNGC 3 cut(s) 598, 823, 935
BmcAI AGTACT 1 cut(s) 945
Bme1390I CCNGG 3 cut(s) 366, 490, 1042
Bme18I GGWCC 1 cut(s) 492
BmgT120I GGNCC 1 cut(s) 492
BmiI GGNNCC 2 cut(s) 354, 662
BmrFI CCNGG 3 cut(s) 366, 490, 1042
BmrI ACTGGG 2 cut(s) 114, 448
BmsI GCATC 3 cut(s) 475, 732, 966
BmuI ACTGGG 2 cut(s) 114, 448
BplI GAGNNNNNCTC 2 cut(s) 542, 574
Bpu10I CCTNAGC 1 cut(s) 423
BpuMI CCSGG 2 cut(s) 366, 490
Bsa29I ATCGAT 1 cut(s) 772
BsaJI CCNNGG 3 cut(s) 546, 1040, 1041
BsaXI ACNNNNNCTCC 4 cut(s) 147, 177, 791, 821
Bse118I RCCGGY 1 cut(s) 55
Bse1I ACTGG 2 cut(s) 120, 454
Bse3DI GCAATG 1 cut(s) 328
BseBI CCWGG 1 cut(s) 1042
BseCI ATCGAT 1 cut(s) 772
BseDI CCNNGG 3 cut(s) 546, 1040, 1041
BseGI GGATG 1 cut(s) 216
BseMI GCAATG 1 cut(s) 328
BseNI ACTGG 2 cut(s) 120, 454
BseXI GCAGC 3 cut(s) 583, 808, 945
BshFI GGCC 4 cut(s) 59, 327, 716, 1077
BshVI ATCGAT 1 cut(s) 772
BsiHKAI GWGCWC 2 cut(s) 104, 373
BsiSI CCGG 4 cut(s) 56, 366, 490, 605
BsmAI GTCTC 2 cut(s) 508, 807
BsnI GGCC 4 cut(s) 59, 327, 716, 1077
Bsp1286I GDGCHC 2 cut(s) 104, 373
Bsp143I GATC 5 cut(s) 108, 205, 231, 309, 660
BspACI CCGC 2 cut(s) 199, 936
BspANI GGCC 4 cut(s) 59, 327, 716, 1077
BspDI ATCGAT 1 cut(s) 772
BspHI TCATGA 1 cut(s) 34
BspLI GGNNCC 2 cut(s) 354, 662
BspMAI CTGCAG 1 cut(s) 826
BspPI GGATC 3 cut(s) 213, 655, 668
BsrDI GCAATG 1 cut(s) 328
BsrFI RCCGGY 1 cut(s) 55
BsrI ACTGG 2 cut(s) 120, 454
BssAI RCCGGY 1 cut(s) 55
BssECI CCNNGG 3 cut(s) 546, 1040, 1041
BssMI GATC 5 cut(s) 108, 205, 231, 309, 660
BssNAI GTATAC 1 cut(s) 255
Bst1107I GTATAC 1 cut(s) 255
Bst2UI CCWGG 1 cut(s) 1042
Bst4CI ACNGT 3 cut(s) 85, 671, 899
BstAPI GCANNNNNTGC 1 cut(s) 87
BstC8I GCNNGC 2 cut(s) 57, 197
BstDEI CTNAG 5 cut(s) 302, 423, 587, 778, 903
BstDSI CCRYGG 1 cut(s) 546
BstF5I GGATG 1 cut(s) 216
BstHHI GCGC 1 cut(s) 147
BstKTI GATC 5 cut(s) 111, 208, 234, 312, 663
BstMAI GTCTC 2 cut(s) 508, 807
BstMBI GATC 5 cut(s) 108, 205, 231, 309, 660
BstMWI GCNNNNNNNGC 4 cut(s) 52, 87, 333, 605
BstNI CCWGG 1 cut(s) 1042
BstSCI CCNGG 3 cut(s) 364, 488, 1040
BstSFI CTRYAG 1 cut(s) 822
BstV1I GCAGC 3 cut(s) 583, 808, 945
BstX2I RGATCY 1 cut(s) 660
BstYI RGATCY 1 cut(s) 660
BstZ17I GTATAC 1 cut(s) 255
Bsu15I ATCGAT 1 cut(s) 772
BsuRI GGCC 4 cut(s) 59, 327, 716, 1077
BsuTUI ATCGAT 1 cut(s) 772
BtgI CCRYGG 1 cut(s) 546
BtsCI GGATG 1 cut(s) 216
BtsIMutI CAGTG 2 cut(s) 90, 717
Cac8I GCNNGC 2 cut(s) 57, 197
CaiI CAGNNNCTG 1 cut(s) 985
CciI TCATGA 1 cut(s) 34
CfoI GCGC 1 cut(s) 147
Cfr10I RCCGGY 1 cut(s) 55
Cfr13I GGNCC 1 cut(s) 492
ClaI ATCGAT 1 cut(s) 772
CseI GACGC 1 cut(s) 572
Csp6I GTAC 1 cut(s) 944
CviAII CATG 2 cut(s) 35, 96
CviQI GTAC 1 cut(s) 944
DdeI CTNAG 5 cut(s) 302, 423, 587, 778, 903
DpnI GATC 5 cut(s) 110, 207, 233, 311, 662
DpnII GATC 5 cut(s) 108, 205, 231, 309, 660
DraIII CACNNNGTG 1 cut(s) 87
EaeI YGGCCR 3 cut(s) 57, 714, 1075
Ecl136II GAGCTC 1 cut(s) 102
Eco24I GRGCYC 1 cut(s) 104
Eco47I GGWCC 1 cut(s) 492
Eco53kI GAGCTC 1 cut(s) 102
Eco57I CTGAAG 3 cut(s) 42, 161, 768
EcoICRI GAGCTC 1 cut(s) 102
EcoRI GAATTC 1 cut(s) 571
EcoRII CCWGG 1 cut(s) 1040
EcoT38I GRGCYC 1 cut(s) 104
FaeI CATG 2 cut(s) 38, 99
FatI CATG 2 cut(s) 34, 95
FbaI TGATCA 2 cut(s) 108, 231
FblI GTMKAC 1 cut(s) 254
Fnu4HI GCNGC 3 cut(s) 597, 822, 934
FokI GGATG 1 cut(s) 223
FriOI GRGCYC 1 cut(s) 104
Fsp4HI GCNGC 3 cut(s) 597, 822, 934
FspBI CTAG 2 cut(s) 429, 1064
GlaI GCGC 1 cut(s) 146
GluI GCNGC 3 cut(s) 597, 822, 934
HaeIII GGCC 4 cut(s) 59, 327, 716, 1077
HapII CCGG 4 cut(s) 56, 366, 490, 605
HgaI GACGC 1 cut(s) 572
HhaI GCGC 1 cut(s) 147
Hin1II CATG 2 cut(s) 38, 99
Hin6I GCGC 1 cut(s) 145
HinP1I GCGC 1 cut(s) 145
HinfI GANTC 6 cut(s) 75, 630, 800, 869, 907, 1046
HpaII CCGG 4 cut(s) 56, 366, 490, 605
HphI GGTGA 4 cut(s) 173, 254, 856, 950
Hpy166II GTNNAC 3 cut(s) 255, 299, 556
Hpy188I TCNGA 5 cut(s) 210, 231, 309, 314, 404
Hpy188III TCNNGA 3 cut(s) 20, 35, 789
Hpy8I GTNNAC 3 cut(s) 255, 299, 556
Hpy99I CGWCG 1 cut(s) 226
HpyAV CCTTC 2 cut(s) 194, 196
HpyCH4III ACNGT 3 cut(s) 85, 671, 899
HpyCH4IV ACGT 3 cut(s) 612, 675, 693
HpyCH4V TGCA 7 cut(s) 90, 321, 341, 599, 824, 979, 1055
HpyF10VI GCNNNNNNNGC 4 cut(s) 52, 87, 333, 605
HpyF3I CTNAG 5 cut(s) 302, 423, 587, 778, 903
HpySE526I ACGT 3 cut(s) 612, 675, 693
Hsp92II CATG 2 cut(s) 38, 99
HspAI GCGC 1 cut(s) 145
KroI GCCGGC 1 cut(s) 55
KroNI GCCGGC 1 cut(s) 57
Ksp22I TGATCA 2 cut(s) 108, 231
Kzo9I GATC 5 cut(s) 108, 205, 231, 309, 660
LmnI GCTCC 2 cut(s) 99, 368
Lsp1109I GCAGC 3 cut(s) 583, 808, 945
LweI GCATC 3 cut(s) 475, 732, 966
MaeI CTAG 2 cut(s) 429, 1064
MaeII ACGT 3 cut(s) 612, 675, 693
MaeIII GTNAC 2 cut(s) 215, 671
MalI GATC 5 cut(s) 110, 207, 233, 311, 662
MboI GATC 5 cut(s) 108, 205, 231, 309, 660
MboII GAAGA 5 cut(s) 35, 170, 698, 761, 1022
MflI RGATCY 1 cut(s) 660
MhlI GDGCHC 2 cut(s) 104, 373
MlsI TGGCCA 2 cut(s) 716, 1077
MluCI AATT 7 cut(s) 358, 527, 571, 600, 921, 988, 1030
MluNI TGGCCA 2 cut(s) 716, 1077
MlyI GAGTC 1 cut(s) 809
MmeI TCCRAC 2 cut(s) 401, 838
MnlI CCTC 7 cut(s) 173, 338, 384, 544, 847, 975, 978
Mox20I TGGCCA 2 cut(s) 716, 1077
MroNI GCCGGC 1 cut(s) 55
MroXI GAANNNNTTC 1 cut(s) 30
MscI TGGCCA 2 cut(s) 716, 1077
MseI TTAA 4 cut(s) 398, 525, 887, 918
MslI CAYNNNNRTG 1 cut(s) 722
Msp20I TGGCCA 2 cut(s) 716, 1077
MspA1I CMGCKG 1 cut(s) 936
MspI CCGG 4 cut(s) 56, 366, 490, 605
MspR9I CCNGG 3 cut(s) 366, 490, 1042
MvaI CCWGG 1 cut(s) 1042
MwoI GCNNNNNNNGC 4 cut(s) 52, 87, 333, 605
NaeI GCCGGC 1 cut(s) 57
NciI CCSGG 2 cut(s) 366, 490
NdeII GATC 5 cut(s) 108, 205, 231, 309, 660
NgoMIV GCCGGC 1 cut(s) 55
NlaIII CATG 2 cut(s) 38, 99
NlaIV GGNNCC 2 cut(s) 354, 662
PagI TCATGA 1 cut(s) 34
PasI CCCWGGG 1 cut(s) 1041
PdiI GCCGGC 1 cut(s) 57
PdmI GAANNNNTTC 1 cut(s) 30
PfeI GAWTC 5 cut(s) 75, 630, 869, 907, 1046
PfoI TCCNGGA 1 cut(s) 364
PkrI GCNGC 3 cut(s) 598, 823, 935
PleI GAGTC 1 cut(s) 808
PpsI GAGTC 1 cut(s) 808
PsiI TTATAA 1 cut(s) 993
Psp124BI GAGCTC 1 cut(s) 104
Psp6I CCWGG 1 cut(s) 1040
PspGI CCWGG 1 cut(s) 1040
PspN4I GGNNCC 2 cut(s) 354, 662
PspPI GGNCC 1 cut(s) 492
PstI CTGCAG 1 cut(s) 826
PstNI CAGNNNCTG 1 cut(s) 985
PsuI RGATCY 1 cut(s) 660
RsaI GTAC 1 cut(s) 945
RsaNI GTAC 1 cut(s) 944
RseI CAYNNNNRTG 1 cut(s) 722
SacI GAGCTC 1 cut(s) 104
SaqAI TTAA 4 cut(s) 398, 525, 887, 918
SatI GCNGC 3 cut(s) 597, 822, 934
Sau3AI GATC 5 cut(s) 108, 205, 231, 309, 660
Sau96I GGNCC 1 cut(s) 492
ScaI AGTACT 1 cut(s) 945
SchI GAGTC 1 cut(s) 809
ScrFI CCNGG 3 cut(s) 366, 490, 1042
SduI GDGCHC 2 cut(s) 104, 373
SfaNI GCATC 3 cut(s) 475, 732, 966
SfcI CTRYAG 1 cut(s) 822
SinI GGWCC 1 cut(s) 492
SmiMI CAYNNNNRTG 1 cut(s) 722
Sse9I AATT 7 cut(s) 358, 527, 571, 600, 921, 988, 1030
SsiI CCGC 2 cut(s) 199, 936
SspI AATATT 2 cut(s) 387, 832
SspMI CTAG 2 cut(s) 429, 1064
SstI GAGCTC 1 cut(s) 104
StyD4I CCNGG 3 cut(s) 364, 488, 1040
TaaI ACNGT 3 cut(s) 85, 671, 899
TaiI ACGT 3 cut(s) 615, 678, 696
TaqI TCGA 3 cut(s) 129, 772, 970
TaqII GACCGA 1 cut(s) 1013
TasI AATT 7 cut(s) 358, 527, 571, 600, 921, 988, 1030
TatI WGTACW 1 cut(s) 943
TfiI GAWTC 5 cut(s) 75, 630, 869, 907, 1046
Tru1I TTAA 4 cut(s) 398, 525, 887, 918
Tru9I TTAA 4 cut(s) 398, 525, 887, 918
TscAI CASTG 2 cut(s) 90, 724
TseI GCWGC 3 cut(s) 596, 821, 933
TspDTI ATGAA 5 cut(s) 23, 51, 115, 474, 863
TspGWI ACGGA 2 cut(s) 628, 900
TspRI CASTG 2 cut(s) 90, 724
VpaK11BI GGWCC 1 cut(s) 492
XapI RAATTY 3 cut(s) 527, 571, 921
XmiI GTMKAC 1 cut(s) 254
XmnI GAANNNNTTC 1 cut(s) 30
XspI CTAG 2 cut(s) 429, 1064
ZrmI AGTACT 1 cut(s) 945
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.