FvH4_1g22270

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000068
Physical Location & Seq
Forward (+)
14173189 .. 14175005
1817 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g22270.t1

Sequence Viewer

Length: 1194 bp
ATGGAGATCCAAAAACAAAAGAGGGTTATCGATAACTACTACTTTCCCGAAGAAATCATAGACAAAATCCTGTTGAAGTTGCCCGTCAAAGACTTGATCAGATGCAGCGCCGTGTGCAAGCTATGGAACTTCCTCGTCAAAACCCCTACCTTCATTCAAACCCACCTCAACAATCAAACCACCGCCGGCGACGTTTCGGGGCTCCTCCTCCTCATCTCCTCCGAATCAAACGCTTTGCATTGGGATAACCCTGCATCTTTATTCGGTCAGTATTCGAAACTCCTGCATCCGATTGACAACAATAAGAATAGTTGTTGGACCAAAAATAGGGGTTCCAAAGTGGTCGGAACTTGTAATGGACTCGTATGCCTGGCTGTTTCCTCATCTTATATTGACCCCTGCCCTCCTGTTATTCTCTGGAATCCATCCATTAGAAAATTCGGGTTTCTGCCTAGTCCTAGTCGTGCCGTTAAGTGCTTCCTGAATGAAAGTTATAGTCTCTGCTATGATTCTCGTATCGGTGATTATAAGGTTGTGAGAATTTTCATGGAACCCGATCCTGAAGTTGAGGTTGAGGTTTGGTCCTTAGCCAGGGGTACCTGGAAGAGTCTTAGTAATGTTCCTCCCGATTTTTACCCTGATACATCTCGTAAGGTTTTTGTCAATGGTGCTTTTCACTGGGTTAATTACCCCCGGAGGAGAACGGAGCTGGAGGAGATGGAGGATTTTACTGCTTCCGTTGTGGCACTGGATATGGTTGATGAATCATTTCGCAATGTTGAGATTCCTCAAGCTTTTTGGGGAAACCGTCCCCGTCCACTCATGATTTCAAGGTACTATGGTGATGGGGATCAGTTCTGGCTTGCCTTATTTGATCCCCAGGGAGACTCTTGTTTTGACTTGTGGGTGATGAAAGAGTATGGCGTGGCCGAATCATGGACTAAATTATTCAATGTGCGTCTGCTAGGATCTCTGGAAGAAAAACCTTATTGTATCGAGCCACTTGGTCTAACAAAGAGTGGTCAGGTGGTGGTCAGGTATGATCGAAATGGAGAGTTCATTTCGTACAAGTTTTATGACCCTGAGGACAAACAGTTCAGAGATTTTGGAAATCAGGGGGATCACTACTACTACATGGATTCTTTCGTGGAGAGCCTTGTCTTACTTGGCCAAACCAATGTTTTTTCTTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

398

Amino Acids

45.86

Weight (kDa)

5.44

Isoelectric Point (pI)

43.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 15 - 51 1.2e-09 F-box domain
F-box-like PF12937 16 - 49 3.4e-08 F-box-like
FBA_3 PF08268 102 - 373 7.1e-17 F-box associated beta propeller domain
FBA_1 PF07734 112 - 387 6.7e-18 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 528
Acc65I GGTACC 1 cut(s) 596
AccB1I GGYRCC 1 cut(s) 596
AciI CCGC 1 cut(s) 183
AclWI GGATC 5 cut(s) 551, 858, 869, 976, 1128
AcoI YGGCCR 2 cut(s) 927, 1168
AcsI RAATTY 2 cut(s) 437, 540
AcuI CTGAAG 1 cut(s) 582
AfaI GTAC 3 cut(s) 598, 836, 1067
AfiI CCNNNNNNNGG 3 cut(s) 327, 591, 936
AgsI TTSAA 4 cut(s) 76, 158, 831, 952
AjnI CCWGG 4 cut(s) 369, 590, 599, 879
AloI GAACNNNNNNTCC 2 cut(s) 1079, 1111
AluBI AGCT 3 cut(s) 121, 709, 794
AluI AGCT 3 cut(s) 121, 709, 794
Alw26I GTCTC 2 cut(s) 503, 879
AlwI GGATC 5 cut(s) 551, 858, 869, 976, 1128
AoxI GGCC 2 cut(s) 927, 1168
ApeKI GCWGC 1 cut(s) 105
ApoI RAATTY 2 cut(s) 437, 540
ArsI GACNNNNNNTTYG 2 cut(s) 878, 910
Asp700I GAANNNNTTC 1 cut(s) 768
Asp718I GGTACC 1 cut(s) 596
AspLEI GCGC 1 cut(s) 110
AspS9I GGNCC 2 cut(s) 318, 582
AsuC2I CCSGG 1 cut(s) 694
AsuHPI GGTGA 3 cut(s) 533, 854, 919
AsuII TTCGAA 1 cut(s) 275
AvaII GGWCC 2 cut(s) 318, 582
AxyI CCTNAGG 1 cut(s) 1083
BaeI ACNNNNGTAYC 2 cut(s) 826, 859
BalI TGGCCA 1 cut(s) 1170
BanI GGYRCC 1 cut(s) 596
BanII GRGCYC 1 cut(s) 204
BbvI GCAGC 1 cut(s) 117
BccI CCATC 3 cut(s) 433, 712, 839
BceAI ACGGC 2 cut(s) 95, 452
BcgI CGANNNNNNTGC 2 cut(s) 265, 299
BciT130I CCWGG 4 cut(s) 371, 592, 601, 881
BclI TGATCA 1 cut(s) 96
BcnI CCSGG 1 cut(s) 694
BcoDI GTCTC 2 cut(s) 503, 879
BfaI CTAG 3 cut(s) 453, 459, 965
BfoI RGCGCY 1 cut(s) 111
BisI GCNGC 1 cut(s) 106
BlsI GCNGC 1 cut(s) 107
Bme1390I CCNGG 5 cut(s) 371, 592, 601, 694, 881
Bme18I GGWCC 2 cut(s) 318, 582
BmgT120I GGNCC 2 cut(s) 318, 582
BmiI GGNNCC 4 cut(s) 203, 334, 552, 598
BmrFI CCNGG 5 cut(s) 371, 592, 601, 694, 881
BmrI ACTGGG 1 cut(s) 688
BmsI GCATC 3 cut(s) 92, 263, 295
BmuI ACTGGG 1 cut(s) 688
BpmI CTGGAG 1 cut(s) 731
Bpu10I CCTNAGC 1 cut(s) 586
Bpu14I TTCGAA 1 cut(s) 275
BpuEI CTTGAG 1 cut(s) 774
BpuMI CCSGG 1 cut(s) 694
Bsa29I ATCGAT 1 cut(s) 30
BsaBI GATNNNNATC 1 cut(s) 849
BsaJI CCNNGG 4 cut(s) 591, 692, 879, 880
Bsc4I CCNNNNNNNGG 3 cut(s) 327, 591, 936
Bse118I RCCGGY 1 cut(s) 185
Bse1I ACTGG 2 cut(s) 683, 753
Bse21I CCTNAGG 1 cut(s) 1083
Bse3DI GCAATG 1 cut(s) 781
Bse8I GATNNNNATC 1 cut(s) 849
BseBI CCWGG 4 cut(s) 371, 592, 601, 881
BseCI ATCGAT 1 cut(s) 30
BseDI CCNNGG 4 cut(s) 591, 692, 879, 880
BseGI GGATG 2 cut(s) 286, 425
BseJI GATNNNNATC 1 cut(s) 849
BseLI CCNNNNNNNGG 3 cut(s) 327, 591, 936
BseMI GCAATG 1 cut(s) 781
BseMII CTCAG 1 cut(s) 1074
BseNI ACTGG 2 cut(s) 683, 753
BseRI GAGGAG 6 cut(s) 194, 197, 200, 208, 712, 728
BseXI GCAGC 1 cut(s) 117
BshFI GGCC 2 cut(s) 929, 1170
BshNI GGYRCC 1 cut(s) 596
BshVI ATCGAT 1 cut(s) 30
BsiSI CCGG 2 cut(s) 186, 694
BslFI GGGAC 1 cut(s) 795
BslI CCNNNNNNNGG 3 cut(s) 327, 591, 936
BsmAI GTCTC 2 cut(s) 503, 879
BsmFI GGGAC 1 cut(s) 795
BsnI GGCC 2 cut(s) 929, 1170
Bsp119I TTCGAA 1 cut(s) 275
Bsp1286I GDGCHC 1 cut(s) 204
Bsp143I GATC 8 cut(s) 6, 96, 556, 850, 874, 968, 1042, 1120
BspACI CCGC 1 cut(s) 183
BspANI GGCC 2 cut(s) 929, 1170
BspCNI CTCAG 1 cut(s) 1075
BspDI ATCGAT 1 cut(s) 30
BspHI TCATGA 1 cut(s) 822
BspLI GGNNCC 4 cut(s) 203, 334, 552, 598
BspPI GGATC 5 cut(s) 551, 858, 869, 976, 1128
BspT104I TTCGAA 1 cut(s) 275
BspT107I GGYRCC 1 cut(s) 596
BsrDI GCAATG 1 cut(s) 781
BsrFI RCCGGY 1 cut(s) 185
BsrI ACTGG 2 cut(s) 683, 753
BssAI RCCGGY 1 cut(s) 185
BssECI CCNNGG 4 cut(s) 591, 692, 879, 880
BssMI GATC 8 cut(s) 6, 96, 556, 850, 874, 968, 1042, 1120
Bst2UI CCWGG 4 cut(s) 371, 592, 601, 881
Bst4CI ACNGT 2 cut(s) 809, 1095
Bst6I CTCTTC 1 cut(s) 599
BstBI TTCGAA 1 cut(s) 275
BstC8I GCNNGC 3 cut(s) 119, 187, 864
BstDEI CTNAG 3 cut(s) 586, 611, 1083
BstENI CCTNNNNNAGG 1 cut(s) 589
BstF5I GGATG 2 cut(s) 286, 425
BstH2I RGCGCY 1 cut(s) 111
BstHHI GCGC 1 cut(s) 110
BstKTI GATC 8 cut(s) 9, 99, 559, 853, 877, 971, 1045, 1123
BstMAI GTCTC 2 cut(s) 503, 879
BstMBI GATC 8 cut(s) 6, 96, 556, 850, 874, 968, 1042, 1120
BstMWI GCNNNNNNNGC 1 cut(s) 114
BstNI CCWGG 4 cut(s) 371, 592, 601, 881
BstSCI CCNGG 5 cut(s) 369, 590, 599, 692, 879
BstV1I GCAGC 1 cut(s) 117
BstX2I RGATCY 2 cut(s) 6, 968
BstYI RGATCY 2 cut(s) 6, 968
Bsu15I ATCGAT 1 cut(s) 30
Bsu36I CCTNAGG 1 cut(s) 1083
BsuRI GGCC 2 cut(s) 929, 1170
BsuTUI ATCGAT 1 cut(s) 30
BtsCI GGATG 2 cut(s) 286, 425
BtsIMutI CAGTG 2 cut(s) 676, 746
Cac8I GCNNGC 3 cut(s) 119, 187, 864
CciI TCATGA 1 cut(s) 822
CfoI GCGC 1 cut(s) 110
Cfr10I RCCGGY 1 cut(s) 185
Cfr13I GGNCC 2 cut(s) 318, 582
ClaI ATCGAT 1 cut(s) 30
CseI GACGC 1 cut(s) 947
Csp6I GTAC 3 cut(s) 597, 835, 1066
CviAII CATG 4 cut(s) 547, 823, 936, 1135
CviQI GTAC 3 cut(s) 597, 835, 1066
DdeI CTNAG 3 cut(s) 586, 611, 1083
DpnI GATC 8 cut(s) 8, 98, 558, 852, 876, 970, 1044, 1122
DpnII GATC 8 cut(s) 6, 96, 556, 850, 874, 968, 1042, 1120
EaeI YGGCCR 2 cut(s) 927, 1168
Eam1104I CTCTTC 1 cut(s) 599
EarI CTCTTC 1 cut(s) 599
Eco24I GRGCYC 1 cut(s) 204
Eco47I GGWCC 2 cut(s) 318, 582
Eco57I CTGAAG 1 cut(s) 582
Eco81I CCTNAGG 1 cut(s) 1083
EcoNI CCTNNNNNAGG 1 cut(s) 589
EcoRII CCWGG 4 cut(s) 369, 590, 599, 879
EcoT38I GRGCYC 1 cut(s) 204
FaeI CATG 4 cut(s) 550, 826, 939, 1138
FaqI GGGAC 1 cut(s) 795
FatI CATG 4 cut(s) 546, 822, 935, 1134
FbaI TGATCA 1 cut(s) 96
Fnu4HI GCNGC 1 cut(s) 106
FokI GGATG 2 cut(s) 273, 412
FriOI GRGCYC 1 cut(s) 204
Fsp4HI GCNGC 1 cut(s) 106
FspBI CTAG 3 cut(s) 453, 459, 965
GlaI GCGC 1 cut(s) 109
GluI GCNGC 1 cut(s) 106
GsuI CTGGAG 1 cut(s) 731
HaeII RGCGCY 1 cut(s) 111
HaeIII GGCC 2 cut(s) 929, 1170
HapII CCGG 2 cut(s) 186, 694
HgaI GACGC 1 cut(s) 947
HhaI GCGC 1 cut(s) 110
Hin1II CATG 4 cut(s) 550, 826, 939, 1138
Hin6I GCGC 1 cut(s) 108
HinP1I GCGC 1 cut(s) 108
HindIII AAGCTT 1 cut(s) 792
HpaII CCGG 2 cut(s) 186, 694
HphI GGTGA 3 cut(s) 533, 854, 919
Hpy166II GTNNAC 1 cut(s) 818
Hpy188I TCNGA 5 cut(s) 101, 223, 291, 347, 1100
Hpy188III TCNNGA 7 cut(s) 47, 418, 481, 560, 626, 823, 974
Hpy8I GTNNAC 1 cut(s) 818
Hpy99I CGWCG 1 cut(s) 194
HpyAV CCTTC 1 cut(s) 160
HpyCH4III ACNGT 2 cut(s) 809, 1095
HpyCH4IV ACGT 1 cut(s) 192
HpyCH4V TGCA 5 cut(s) 105, 117, 238, 254, 286
HpyF10VI GCNNNNNNNGC 1 cut(s) 114
HpyF3I CTNAG 3 cut(s) 586, 611, 1083
HpySE526I ACGT 1 cut(s) 192
Hsp92II CATG 4 cut(s) 550, 826, 939, 1138
HspAI GCGC 1 cut(s) 108
KpnI GGTACC 1 cut(s) 600
KroI GCCGGC 1 cut(s) 185
KroNI GCCGGC 1 cut(s) 187
Ksp22I TGATCA 1 cut(s) 96
Kzo9I GATC 8 cut(s) 6, 96, 556, 850, 874, 968, 1042, 1120
LmnI GCTCC 2 cut(s) 207, 706
Lsp1109I GCAGC 1 cut(s) 117
LweI GCATC 3 cut(s) 92, 263, 295
MaeI CTAG 3 cut(s) 453, 459, 965
MaeII ACGT 1 cut(s) 192
MalI GATC 8 cut(s) 8, 98, 558, 852, 876, 970, 1044, 1122
MboI GATC 8 cut(s) 6, 96, 556, 850, 874, 968, 1042, 1120
MboII GAAGA 3 cut(s) 62, 616, 989
MflI RGATCY 2 cut(s) 6, 968
MhlI GDGCHC 1 cut(s) 204
MlsI TGGCCA 1 cut(s) 1170
MluCI AATT 4 cut(s) 437, 540, 685, 944
MluNI TGGCCA 1 cut(s) 1170
MlyI GAGTC 3 cut(s) 354, 616, 881
MmeI TCCRAC 2 cut(s) 296, 325
Mox20I TGGCCA 1 cut(s) 1170
MreI CGCCGGCG 1 cut(s) 185
MroNI GCCGGC 1 cut(s) 185
MroXI GAANNNNTTC 1 cut(s) 768
MscI TGGCCA 1 cut(s) 1170
MseI TTAA 2 cut(s) 471, 684
Msp20I TGGCCA 1 cut(s) 1170
MspI CCGG 2 cut(s) 186, 694
MspR9I CCNGG 5 cut(s) 371, 592, 601, 694, 881
MvaI CCWGG 4 cut(s) 371, 592, 601, 881
MwoI GCNNNNNNNGC 1 cut(s) 114
NaeI GCCGGC 1 cut(s) 187
NciI CCSGG 1 cut(s) 694
NdeII GATC 8 cut(s) 6, 96, 556, 850, 874, 968, 1042, 1120
NgoMIV GCCGGC 1 cut(s) 185
NlaIII CATG 4 cut(s) 550, 826, 939, 1138
NlaIV GGNNCC 4 cut(s) 203, 334, 552, 598
NspV TTCGAA 1 cut(s) 275
PagI TCATGA 1 cut(s) 822
PasI CCCWGGG 1 cut(s) 880
PdiI GCCGGC 1 cut(s) 187
PdmI GAANNNNTTC 1 cut(s) 768
PfeI GAWTC 7 cut(s) 224, 421, 509, 764, 784, 932, 1139
PkrI GCNGC 1 cut(s) 107
PleI GAGTC 3 cut(s) 354, 615, 881
PpsI GAGTC 3 cut(s) 354, 615, 881
PsiI TTATAA 1 cut(s) 528
Psp6I CCWGG 4 cut(s) 369, 590, 599, 879
PspGI CCWGG 4 cut(s) 369, 590, 599, 879
PspN4I GGNNCC 4 cut(s) 203, 334, 552, 598
PspPI GGNCC 2 cut(s) 318, 582
PsuI RGATCY 2 cut(s) 6, 968
RsaI GTAC 3 cut(s) 598, 836, 1067
RsaNI GTAC 3 cut(s) 597, 835, 1066
SaqAI TTAA 2 cut(s) 471, 684
SatI GCNGC 1 cut(s) 106
Sau3AI GATC 8 cut(s) 6, 96, 556, 850, 874, 968, 1042, 1120
Sau96I GGNCC 2 cut(s) 318, 582
SchI GAGTC 3 cut(s) 354, 616, 881
ScrFI CCNGG 5 cut(s) 371, 592, 601, 694, 881
SduI GDGCHC 1 cut(s) 204
SfaNI GCATC 3 cut(s) 92, 263, 295
SfuI TTCGAA 1 cut(s) 275
SgrAI CRCCGGYG 1 cut(s) 185
SinI GGWCC 2 cut(s) 318, 582
SmlI CTYRAG 1 cut(s) 789
SmoI CTYRAG 1 cut(s) 789
Sse9I AATT 4 cut(s) 437, 540, 685, 944
SsiI CCGC 1 cut(s) 183
SspMI CTAG 3 cut(s) 453, 459, 965
StyD4I CCNGG 5 cut(s) 369, 590, 599, 692, 879
TaaI ACNGT 2 cut(s) 809, 1095
TaiI ACGT 1 cut(s) 195
TaqI TCGA 4 cut(s) 30, 275, 996, 1045
TaqII GACCGA 1 cut(s) 254
TasI AATT 4 cut(s) 437, 540, 685, 944
TfiI GAWTC 7 cut(s) 224, 421, 509, 764, 784, 932, 1139
Tru1I TTAA 2 cut(s) 471, 684
Tru9I TTAA 2 cut(s) 471, 684
TscAI CASTG 2 cut(s) 683, 753
TseI GCWGC 1 cut(s) 105
TspDTI ATGAA 6 cut(s) 142, 501, 535, 777, 926, 1048
TspGWI ACGGA 2 cut(s) 719, 727
TspRI CASTG 2 cut(s) 683, 753
VpaK11BI GGWCC 2 cut(s) 318, 582
XagI CCTNNNNNAGG 1 cut(s) 589
XapI RAATTY 2 cut(s) 437, 540
XmnI GAANNNNTTC 1 cut(s) 768
XspI CTAG 3 cut(s) 453, 459, 965
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.