Rroxscaffold_1G00051610

F-box domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000068
Physical Location & Seq
Forward (+)
72282441 .. 72283604
1164 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00051610.1

Sequence Viewer

Length: 1164 bp
ATGATAGACTCTTTTCCTGAGGAAATCAGCCATGATATCCTATCCAGACTACCTATTAAGTGTTTGATCAGATGCACCTCGGTGAGCAAGCCATTGTTGTCCATTATCAAAAACTCTGGTTTTATTCGCGCCCACCTCAGACGTAGACATGAGACTCTACTTCTACTACATAGCAGGTGCTACAGAGCTTCCATGCATGAGGGAACAGAAGAGGTTTACCGTTTGCATTGTGATAATCCTGCTTTTGATGAGTATTGTAGGATAGATTTTCAAGTTGACCGCATGGTAGACCCGATAAATGGGCGTTTCCGTGTGGCTGGCATTTGTGACGGGCTAGTGTGCCTTGCGGATGATTTAATATCTAAAGCTTTAAGCTACATAATATGGAACCCATCAATAAGAAAGGCAGTGATGCTTCCCCGGCCTGGTTTTACCTTCTCCACTCATGGTCCTTTTGAAGATTCTATTGGGTTCGGGTTTGATGCTACGACCAATGACTACAAGGTTGTTCGACTTGTCACTCTTGAGAATCTTGTAGATGAAGATGCGGAAAATCCAACTGTAGCTGAGGTTTATTCACTAGCCGCAGGCTTGTGGAGAAGTCTGGGTTCTGTTGGTCTTCCGTGCCAAATATTTTGTATAAGACCGCATGCTTTCTTCAATGGGAACATTCATTGGGTTGTTCATGCTGTTGCTTCCTTCTATTTCATTTTGGCATTTGATCTTGTTAGTGAGTCATTTCGCAAGATATTGATACCAATTGGCACCAAATTGGGCTTCAATTCTCGAGTTTCTGTTACAGGAGATGGGAAATATCTTGCTTTGTTCACGTGGTATAATGATAAGAATGATATTAGTTATCTTGATATTTGGGTTATGAAACAGTATTGCCAGCAGGAGTCCTGGACCAAAATGATAACTCTCGCTCCACAAGGTCCAGAAGGAAGTGTGCGCCCCATGCCATTTTGTTTTAGAAAGAGCGGTGAAGTATTTTTGGAACTAAGAGAACCATATTTCTATCGTCGATATCAAACATTAGTTTCACTTGACCCTGTGAGTCAACAAATGAACAATGTTGATATTCTTGATTGTGAGTGTTATTCTCTTGATTCTTATGAAGAGAGTCTTGTTTTACTCGACGTGGAAAATGCAGTTTCCTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1 FBA_3

Protein Analysis

387

Amino Acids

44.25

Weight (kDa)

5.62

Isoelectric Point (pI)

40.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 2 - 41 4.8e-06 F-box domain
b-prop_At3g26010-like PF24750 105 - 303 3e-07 F-box protein At3g26010-like, beta-propeller
FBA_3 PF08268 106 - 367 5.9e-19 F-box associated beta propeller domain
FBA_1 PF07734 109 - 311 8.4e-24 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 165
Acc36I ACCTGC 1 cut(s) 165
AccB1I GGYRCC 1 cut(s) 764
AccBSI CCGCTC 1 cut(s) 981
AccI GTMKAC 2 cut(s) 145, 288
AccII CGCG 1 cut(s) 129
AciI CCGC 6 cut(s) 280, 347, 548, 585, 647, 981
AcvI CACGTG 1 cut(s) 831
AfiI CCNNNNNNNGG 2 cut(s) 299, 425
AgsI TTSAA 4 cut(s) 272, 458, 661, 781
AjiI CACGTC 1 cut(s) 1141
AjnI CCWGG 2 cut(s) 424, 902
AjuI GAANNNNNNNTTGG 4 cut(s) 450, 482, 761, 793
AleI CACNNNNGTG 1 cut(s) 80
AluBI AGCT 4 cut(s) 188, 368, 375, 566
AluI AGCT 4 cut(s) 188, 368, 375, 566
Alw26I GTCTC 1 cut(s) 146
Ama87I CYCGRG 1 cut(s) 786
AoxI GGCC 1 cut(s) 422
AspLEI GCGC 2 cut(s) 131, 954
AspS9I GGNCC 3 cut(s) 449, 906, 935
AsuC2I CCSGG 1 cut(s) 421
AsuHPI GGTGA 2 cut(s) 94, 995
AvaI CYCGRG 1 cut(s) 786
AvaII GGWCC 3 cut(s) 449, 906, 935
AxyI CCTNAGG 1 cut(s) 18
BanI GGYRCC 1 cut(s) 764
BbrPI CACGTG 1 cut(s) 831
BbsI GAAGAC 1 cut(s) 611
BbvCI CCTCAGC 1 cut(s) 567
BccI CCATC 2 cut(s) 400, 800
BciT130I CCWGG 2 cut(s) 426, 904
BclI TGATCA 1 cut(s) 66
BcnI CCSGG 1 cut(s) 421
BcoDI GTCTC 1 cut(s) 146
BfaI CTAG 2 cut(s) 335, 581
BfmI CTRYAG 2 cut(s) 181, 561
BfuAI ACCTGC 1 cut(s) 165
BisI GCNGC 1 cut(s) 585
BlsI GCNGC 1 cut(s) 586
Bme1390I CCNGG 3 cut(s) 421, 426, 904
Bme18I GGWCC 3 cut(s) 449, 906, 935
BmeT110I CYCGRG 1 cut(s) 786
BmgBI CACGTC 1 cut(s) 1141
BmgT120I GGNCC 3 cut(s) 449, 906, 935
BmiI GGNNCC 2 cut(s) 389, 766
BmrFI CCNGG 3 cut(s) 421, 426, 904
BmsI GCATC 4 cut(s) 62, 402, 472, 535
BpiI GAAGAC 1 cut(s) 611
Bpu10I CCTNAGC 1 cut(s) 567
BpuEI CTTGAG 1 cut(s) 545
BpuMI CCSGG 1 cut(s) 421
BsaAI YACGTR 1 cut(s) 831
BsaJI CCNNGG 2 cut(s) 78, 419
BsaXI ACNNNNNCTCC 2 cut(s) 910, 940
Bsc4I CCNNNNNNNGG 2 cut(s) 299, 425
Bse21I CCTNAGG 1 cut(s) 18
BseBI CCWGG 2 cut(s) 426, 904
BseDI CCNNGG 2 cut(s) 78, 419
BseGI GGATG 1 cut(s) 355
BseLI CCNNNNNNNGG 2 cut(s) 299, 425
BseMII CTCAG 3 cut(s) 9, 151, 558
Bsh1236I CGCG 1 cut(s) 129
BshFI GGCC 1 cut(s) 424
BshNI GGYRCC 1 cut(s) 764
BsiHKCI CYCGRG 1 cut(s) 786
BsiSI CCGG 1 cut(s) 421
BslI CCNNNNNNNGG 2 cut(s) 299, 425
BsmAI GTCTC 1 cut(s) 146
BsnI GGCC 1 cut(s) 424
BsoBI CYCGRG 1 cut(s) 786
Bsp143I GATC 2 cut(s) 66, 721
BspACI CCGC 6 cut(s) 280, 347, 548, 585, 647, 981
BspANI GGCC 1 cut(s) 424
BspCNI CTCAG 3 cut(s) 10, 150, 559
BspFNI CGCG 1 cut(s) 129
BspLI GGNNCC 2 cut(s) 389, 766
BspMI ACCTGC 1 cut(s) 165
BspT107I GGYRCC 1 cut(s) 764
BsrBI CCGCTC 1 cut(s) 981
BssECI CCNNGG 2 cut(s) 78, 419
BssMI GATC 2 cut(s) 66, 721
Bst2UI CCWGG 2 cut(s) 426, 904
Bst4CI ACNGT 3 cut(s) 221, 562, 885
Bst6I CTCTTC 2 cut(s) 204, 1113
BstBAI YACGTR 1 cut(s) 831
BstC8I GCNNGC 5 cut(s) 89, 319, 589, 651, 893
BstDEI CTNAG 4 cut(s) 18, 137, 567, 1001
BstF5I GGATG 1 cut(s) 355
BstFNI CGCG 1 cut(s) 129
BstHHI GCGC 2 cut(s) 131, 954
BstKTI GATC 2 cut(s) 69, 724
BstMAI GTCTC 1 cut(s) 146
BstMBI GATC 2 cut(s) 66, 721
BstMWI GCNNNNNNNGC 2 cut(s) 421, 958
BstNI CCWGG 2 cut(s) 426, 904
BstNSI RCATGY 1 cut(s) 653
BstSCI CCNGG 3 cut(s) 419, 424, 902
BstSFI CTRYAG 2 cut(s) 181, 561
BstUI CGCG 1 cut(s) 129
BstV2I GAAGAC 1 cut(s) 611
Bsu36I CCTNAGG 1 cut(s) 18
BsuRI GGCC 1 cut(s) 424
BtrI CACGTC 1 cut(s) 1141
BtsCI GGATG 1 cut(s) 355
BtsI GCAGTG 1 cut(s) 414
BtsIMutI CAGTG 1 cut(s) 414
BveI ACCTGC 1 cut(s) 165
Cac8I GCNNGC 5 cut(s) 89, 319, 589, 651, 893
CfoI GCGC 2 cut(s) 131, 954
Cfr13I GGNCC 3 cut(s) 449, 906, 935
CviAII CATG 9 cut(s) 32, 149, 193, 197, 283, 446, 650, 686, 958
DdeI CTNAG 4 cut(s) 18, 137, 567, 1001
DpnI GATC 2 cut(s) 68, 723
DpnII GATC 2 cut(s) 66, 721
Eam1104I CTCTTC 2 cut(s) 204, 1113
EarI CTCTTC 2 cut(s) 204, 1113
Eco32I GATATC 2 cut(s) 37, 1028
Eco47I GGWCC 3 cut(s) 449, 906, 935
Eco72I CACGTG 1 cut(s) 831
Eco81I CCTNAGG 1 cut(s) 18
Eco88I CYCGRG 1 cut(s) 786
EcoRII CCWGG 2 cut(s) 424, 902
EcoRV GATATC 2 cut(s) 37, 1028
EcoT22I ATGCAT 1 cut(s) 198
FaeI CATG 9 cut(s) 35, 152, 196, 200, 286, 449, 653, 689, 961
FalI AAGNNNNNCTT 2 cut(s) 1110, 1142
FatI CATG 9 cut(s) 31, 148, 192, 196, 282, 445, 649, 685, 957
FbaI TGATCA 1 cut(s) 66
FblI GTMKAC 2 cut(s) 145, 288
Fnu4HI GCNGC 1 cut(s) 585
FokI GGATG 1 cut(s) 362
Fsp4HI GCNGC 1 cut(s) 585
FspBI CTAG 2 cut(s) 335, 581
GlaI GCGC 2 cut(s) 130, 953
GluI GCNGC 1 cut(s) 585
HaeIII GGCC 1 cut(s) 424
HapII CCGG 1 cut(s) 421
HhaI GCGC 2 cut(s) 131, 954
Hin1II CATG 9 cut(s) 35, 152, 196, 200, 286, 449, 653, 689, 961
Hin6I GCGC 2 cut(s) 129, 952
HinP1I GCGC 2 cut(s) 129, 952
HincII GTYRAC 2 cut(s) 277, 1061
HindII GTYRAC 2 cut(s) 277, 1061
HindIII AAGCTT 1 cut(s) 366
HinfI GANTC 9 cut(s) 8, 154, 461, 529, 734, 899, 1057, 1109, 1123
HpaII CCGG 1 cut(s) 421
HphI GGTGA 2 cut(s) 94, 995
Hpy166II GTNNAC 6 cut(s) 146, 217, 277, 289, 828, 1061
Hpy188I TCNGA 2 cut(s) 71, 140
Hpy188III TCNNGA 8 cut(s) 17, 45, 524, 786, 863, 938, 1085, 1106
Hpy8I GTNNAC 6 cut(s) 146, 217, 277, 289, 828, 1061
Hpy99I CGWCG 2 cut(s) 1026, 1142
HpyAV CCTTC 3 cut(s) 445, 709, 935
HpyCH4III ACNGT 3 cut(s) 221, 562, 885
HpyCH4IV ACGT 3 cut(s) 142, 830, 1140
HpyCH4V TGCA 4 cut(s) 75, 196, 226, 1151
HpyF10VI GCNNNNNNNGC 2 cut(s) 421, 958
HpyF3I CTNAG 4 cut(s) 18, 137, 567, 1001
HpySE526I ACGT 3 cut(s) 142, 830, 1140
Hsp92II CATG 9 cut(s) 35, 152, 196, 200, 286, 449, 653, 689, 961
HspAI GCGC 2 cut(s) 129, 952
Ksp22I TGATCA 1 cut(s) 66
Kzo9I GATC 2 cut(s) 66, 721
LmnI GCTCC 1 cut(s) 931
LweI GCATC 4 cut(s) 62, 402, 472, 535
MaeI CTAG 2 cut(s) 335, 581
MaeII ACGT 3 cut(s) 142, 830, 1140
MaeIII GTNAC 3 cut(s) 326, 517, 796
MalI GATC 2 cut(s) 68, 723
MbiI CCGCTC 1 cut(s) 981
MboI GATC 2 cut(s) 66, 721
MboII GAAGA 6 cut(s) 221, 470, 554, 611, 649, 1130
MfeI CAATTG 1 cut(s) 759
MluCI AATT 3 cut(s) 759, 770, 781
MlyI GAGTC 6 cut(s) 2, 148, 743, 908, 1066, 1132
MmeI TCCRAC 1 cut(s) 581
MnlI CCTC 6 cut(s) 13, 88, 146, 193, 205, 562
Mph1103I ATGCAT 1 cut(s) 198
MseI TTAA 3 cut(s) 57, 356, 371
MslI CAYNNNNRTG 1 cut(s) 80
MspI CCGG 1 cut(s) 421
MspR9I CCNGG 3 cut(s) 421, 426, 904
MunI CAATTG 1 cut(s) 759
MvaI CCWGG 2 cut(s) 426, 904
MvnI CGCG 1 cut(s) 129
MwoI GCNNNNNNNGC 2 cut(s) 421, 958
NciI CCSGG 1 cut(s) 421
NdeII GATC 2 cut(s) 66, 721
NlaIII CATG 9 cut(s) 35, 152, 196, 200, 286, 449, 653, 689, 961
NlaIV GGNNCC 2 cut(s) 389, 766
NmuCI GTSAC 2 cut(s) 326, 517
NsiI ATGCAT 1 cut(s) 198
NspI RCATGY 1 cut(s) 653
OliI CACNNNNGTG 1 cut(s) 80
PaeI GCATGC 1 cut(s) 653
PaeR7I CTCGAG 1 cut(s) 786
PaqCI CACCTGC 1 cut(s) 165
PfeI GAWTC 3 cut(s) 461, 529, 1109
PfoI TCCNGGA 1 cut(s) 902
PkrI GCNGC 1 cut(s) 586
PleI GAGTC 6 cut(s) 2, 148, 742, 907, 1065, 1131
PmaCI CACGTG 1 cut(s) 831
PmlI CACGTG 1 cut(s) 831
PpsI GAGTC 6 cut(s) 2, 148, 742, 907, 1065, 1131
Ppu21I YACGTR 1 cut(s) 831
Psp6I CCWGG 2 cut(s) 424, 902
PspCI CACGTG 1 cut(s) 831
PspGI CCWGG 2 cut(s) 424, 902
PspN4I GGNNCC 2 cut(s) 389, 766
PspPI GGNCC 3 cut(s) 449, 906, 935
RseI CAYNNNNRTG 1 cut(s) 80
SaqAI TTAA 3 cut(s) 57, 356, 371
SatI GCNGC 1 cut(s) 585
Sau3AI GATC 2 cut(s) 66, 721
Sau96I GGNCC 3 cut(s) 449, 906, 935
SchI GAGTC 6 cut(s) 2, 148, 743, 908, 1066, 1132
ScrFI CCNGG 3 cut(s) 421, 426, 904
SfaNI GCATC 4 cut(s) 62, 402, 472, 535
SfcI CTRYAG 2 cut(s) 181, 561
Sfr274I CTCGAG 1 cut(s) 786
SinI GGWCC 3 cut(s) 449, 906, 935
SlaI CTCGAG 1 cut(s) 786
SmiMI CAYNNNNRTG 1 cut(s) 80
SmlI CTYRAG 2 cut(s) 524, 786
SmoI CTYRAG 2 cut(s) 524, 786
SphI GCATGC 1 cut(s) 653
Sse9I AATT 3 cut(s) 759, 770, 781
SsiI CCGC 6 cut(s) 280, 347, 548, 585, 647, 981
SspI AATATT 1 cut(s) 633
SspMI CTAG 2 cut(s) 335, 581
StyD4I CCNGG 3 cut(s) 419, 424, 902
TaaI ACNGT 3 cut(s) 221, 562, 885
TaiI ACGT 3 cut(s) 145, 833, 1143
TaqI TCGA 4 cut(s) 511, 787, 1024, 1137
TasI AATT 3 cut(s) 759, 770, 781
TauI GCSGC 1 cut(s) 587
TfiI GAWTC 3 cut(s) 461, 529, 1109
Tru1I TTAA 3 cut(s) 57, 356, 371
Tru9I TTAA 3 cut(s) 57, 356, 371
TscAI CASTG 1 cut(s) 414
TseFI GTSAC 2 cut(s) 326, 517
Tsp45I GTSAC 2 cut(s) 326, 517
TspDTI ATGAA 7 cut(s) 555, 662, 674, 697, 893, 1082, 1131
TspGWI ACGGA 2 cut(s) 299, 612
TspRI CASTG 1 cut(s) 414
VpaK11BI GGWCC 3 cut(s) 449, 906, 935
XceI RCATGY 1 cut(s) 653
XhoI CTCGAG 1 cut(s) 786
XmiI GTMKAC 2 cut(s) 145, 288
XspI CTAG 2 cut(s) 335, 581
Zsp2I ATGCAT 1 cut(s) 198
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.