RchiOBHm_Chr5g0030021

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000068
Physical Location & Seq
Forward (+)
23811376 .. 23812572
1197 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ30938

Sequence Viewer

Length: 1197 bp
ATGACTTCGATTTTTCGTTTCTCACTCATAAACACTGTTTTGGTCATCTTTCGAAAATCTCGTAGATTATGTCAAAATATTATCTCGGAGTCGAGTCATACAATGGCAGTACCCGGCAATTTTCCTGAAGATCTCATAGAAGAAATCCTCCTGAAGTTGCCCATCAAGTCATTAATCAGATTCAGCGAAGTGTGCAAATCTTGGAATTCCCTGATCAAGAGCCCTAACTTCATTTACACCCAACTCAACCACACTATCCAATCCAACAACCAAAACGACTCTCACCTACTTCTACTGGAAGGGCTTCTCTCTTCGACTAAGATTTTCTTGTTGCATCCAGCACATAACCCTACATTCGACGTAGACAAAAAGCTTACGGAACCCTCCGCCATCAACACAACTGCAGTCTCTTTCTCATTAAAGAACTTTTCTGTGGTCGGAACCTGTAATGGTCTGGTATGCCTTGCTAATTACATCCATGGTGTTGCAGTAATTTGGAACCCCATAGTTAGAAAGTATGTGATACTGCCTAGTTGTAGTGTTAGGTCATTGAGTGGTTTTGTGAGGTTTGCTTTTGGCTACGTTTCACGTACCAATGACTATAAGGTTTTGAAAACTGTTGTTTGTGATCAAAAGCCTAGTCATGTTGAAGTTTGGTCACTGGCGAGGGGTTCCTGGATGAGTCTTGATGCTGCCATTATTCCTCCGGACTTTAAACCTCGAGACTATAGCTACTTGCGATATCCTTTTGTTAATGGTGCTTTGCATTGGGTTGGTCTGCGACATGGTGTTATCATGACGTTTGATATGTCCACTGAGTTATTTGGAGAGATAATGATGCCTGAAGTTGTGACAAGAGATGCAGAAAACAAATTTATATCCAAATACCGGGAGTCTCTCGCTTTGTTGTGTAAGAGTAATGAAAATTCAATTCACATATGGGTGATGAAAGAGTATGGTTCGGCAGATTCATGGATTCAATTGTCAACTTTACCCCAAGGAAGTTGGACTCGGCCATTATGTTTTACGGAGAGTTGTGATGAACTAGTGCTTCAAAGGGATGGTGTAGGGCTGCAATCAGTGGACCTTAAGAGCAAAACAGTTAACAAGTTACCTGTTAATATATACCTGTACTCCATGAATTCTTATACGGAGAGCCTTGTGTTACTTGGGGATTCGAATGCTGTCTCTTATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

398

Amino Acids

45.02

Weight (kDa)

8.47

Isoelectric Point (pI)

41.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 40 - 77 1.8e-12 F-box domain
F-box-like PF12937 42 - 82 1e-06 F-box-like
FBA_1 PF07734 120 - 333 7.8e-23 F-box associated beta propeller domain
FBA_3 PF08268 130 - 331 4.5e-21 F-box associated beta propeller domain
Beta-prop_AT5G49610-like PF23635 200 - 330 1.7e-06 F-box protein AT5G49610-like, beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 363
AccIII TCCGGA 1 cut(s) 706
AciI CCGC 1 cut(s) 387
AcoI YGGCCR 1 cut(s) 1013
AcsI RAATTY 4 cut(s) 205, 872, 925, 1141
AcuI CTGAAG 3 cut(s) 147, 173, 864
AfaI GTAC 3 cut(s) 111, 592, 1133
AfiI CCNNNNNNNGG 1 cut(s) 888
AflII CTTAAG 1 cut(s) 1088
AgsI TTSAA 5 cut(s) 613, 650, 930, 980, 1055
AhlI ACTAGT 1 cut(s) 1045
AjnI CCWGG 1 cut(s) 674
AluBI AGCT 2 cut(s) 373, 732
AluI AGCT 2 cut(s) 373, 732
Alw26I GTCTC 4 cut(s) 412, 717, 900, 1192
Ama87I CYCGRG 1 cut(s) 720
Aor13HI TCCGGA 1 cut(s) 706
AoxI GGCC 1 cut(s) 1013
ApeKI GCWGC 2 cut(s) 692, 1072
ApoI RAATTY 4 cut(s) 205, 872, 925, 1141
ArsI GACNNNNNNTTYG 2 cut(s) 625, 657
AseI ATTAAT 1 cut(s) 173
Asp700I GAANNNNTTC 1 cut(s) 303
AspS9I GGNCC 1 cut(s) 1084
AsuC2I CCSGG 2 cut(s) 114, 890
AsuHPI GGTGA 2 cut(s) 275, 955
AsuII TTCGAA 2 cut(s) 52, 1178
AvaI CYCGRG 1 cut(s) 720
AvaII GGWCC 1 cut(s) 1084
BanII GRGCYC 1 cut(s) 224
BbvI GCAGC 2 cut(s) 679, 1059
BccI CCATC 3 cut(s) 170, 398, 1055
BciT130I CCWGG 1 cut(s) 676
BclI TGATCA 2 cut(s) 213, 628
BcnI CCSGG 2 cut(s) 114, 890
BcoDI GTCTC 4 cut(s) 412, 717, 900, 1192
BcuI ACTAGT 1 cut(s) 1045
BfaI CTAG 3 cut(s) 531, 639, 1046
BfmI CTRYAG 2 cut(s) 402, 727
BfrI CTTAAG 1 cut(s) 1088
BglII AGATCT 1 cut(s) 130
BisI GCNGC 2 cut(s) 693, 1073
BlsI GCNGC 2 cut(s) 694, 1074
Bme1390I CCNGG 3 cut(s) 114, 676, 890
Bme18I GGWCC 1 cut(s) 1084
BmeT110I CYCGRG 1 cut(s) 720
BmgT120I GGNCC 1 cut(s) 1084
BmiI GGNNCC 4 cut(s) 381, 442, 500, 673
BmrFI CCNGG 3 cut(s) 114, 676, 890
BmsI GCATC 4 cut(s) 343, 679, 828, 850
Bpu14I TTCGAA 2 cut(s) 52, 1178
BpuMI CCSGG 2 cut(s) 114, 890
BsaAI YACGTR 1 cut(s) 590
BsaJI CCNNGG 2 cut(s) 478, 997
BsaWI WCCGGW 1 cut(s) 706
BsaXI ACNNNNNCTCC 2 cut(s) 1118, 1148
Bsc4I CCNNNNNNNGG 1 cut(s) 888
Bse1I ACTGG 2 cut(s) 300, 666
BseAI TCCGGA 1 cut(s) 706
BseBI CCWGG 1 cut(s) 676
BseDI CCNNGG 2 cut(s) 478, 997
BseGI GGATG 4 cut(s) 334, 474, 684, 1066
BseLI CCNNNNNNNGG 1 cut(s) 888
BseMII CTCAG 1 cut(s) 807
BseNI ACTGG 2 cut(s) 300, 666
BseXI GCAGC 2 cut(s) 679, 1059
BshFI GGCC 1 cut(s) 1015
BsiHKCI CYCGRG 1 cut(s) 720
BsiSI CCGG 3 cut(s) 114, 707, 889
BslI CCNNNNNNNGG 1 cut(s) 888
BsmAI GTCTC 4 cut(s) 412, 717, 900, 1192
BsmI GAATGC 1 cut(s) 1186
BsnI GGCC 1 cut(s) 1015
BsoBI CYCGRG 1 cut(s) 720
Bsp119I TTCGAA 2 cut(s) 52, 1178
Bsp1286I GDGCHC 1 cut(s) 224
Bsp13I TCCGGA 1 cut(s) 706
Bsp143I GATC 3 cut(s) 130, 213, 628
Bsp19I CCATGG 1 cut(s) 478
BspACI CCGC 1 cut(s) 387
BspANI GGCC 1 cut(s) 1015
BspCNI CTCAG 1 cut(s) 808
BspEI TCCGGA 1 cut(s) 706
BspHI TCATGA 1 cut(s) 795
BspLI GGNNCC 4 cut(s) 381, 442, 500, 673
BspMAI CTGCAG 1 cut(s) 406
BspT104I TTCGAA 2 cut(s) 52, 1178
BspTI CTTAAG 1 cut(s) 1088
BsrI ACTGG 2 cut(s) 300, 666
BssECI CCNNGG 2 cut(s) 478, 997
BssMI GATC 3 cut(s) 130, 213, 628
BssT1I CCWWGG 2 cut(s) 478, 997
Bst2UI CCWGG 1 cut(s) 676
Bst4CI ACNGT 3 cut(s) 37, 619, 1102
Bst6I CTCTTC 1 cut(s) 316
BstAFI CTTAAG 1 cut(s) 1088
BstBAI YACGTR 1 cut(s) 590
BstBI TTCGAA 2 cut(s) 52, 1178
BstDEI CTNAG 2 cut(s) 318, 816
BstDSI CCRYGG 1 cut(s) 478
BstF5I GGATG 4 cut(s) 334, 474, 684, 1066
BstKTI GATC 3 cut(s) 133, 216, 631
BstMAI GTCTC 4 cut(s) 412, 717, 900, 1192
BstMBI GATC 3 cut(s) 130, 213, 628
BstMWI GCNNNNNNNGC 1 cut(s) 192
BstNI CCWGG 1 cut(s) 676
BstSCI CCNGG 3 cut(s) 112, 674, 888
BstSFI CTRYAG 2 cut(s) 402, 727
BstV1I GCAGC 2 cut(s) 679, 1059
BstX2I RGATCY 1 cut(s) 130
BstYI RGATCY 1 cut(s) 130
BsuRI GGCC 1 cut(s) 1015
BtgI CCRYGG 1 cut(s) 478
BtsCI GGATG 4 cut(s) 334, 474, 684, 1066
BtsIMutI CAGTG 4 cut(s) 33, 659, 813, 1086
CciI TCATGA 1 cut(s) 795
Cfr13I GGNCC 1 cut(s) 1084
Csp6I GTAC 3 cut(s) 110, 591, 1132
CviAII CATG 6 cut(s) 479, 644, 785, 796, 972, 1138
CviJI RGCY 9 cut(s) 222, 304, 373, 579, 637, 732, 1015, 1072, 1158
CviKI_1 RGCY 9 cut(s) 222, 304, 373, 579, 637, 732, 1015, 1072, 1158
CviQI GTAC 3 cut(s) 110, 591, 1132
DdeI CTNAG 2 cut(s) 318, 816
DpnI GATC 3 cut(s) 132, 215, 630
DpnII GATC 3 cut(s) 130, 213, 628
DraI TTTAAA 1 cut(s) 715
EaeI YGGCCR 1 cut(s) 1013
Eam1104I CTCTTC 1 cut(s) 316
EarI CTCTTC 1 cut(s) 316
EciI GGCGGA 1 cut(s) 376
Eco130I CCWWGG 2 cut(s) 478, 997
Eco24I GRGCYC 1 cut(s) 224
Eco32I GATATC 1 cut(s) 743
Eco47I GGWCC 1 cut(s) 1084
Eco57I CTGAAG 3 cut(s) 147, 173, 864
Eco88I CYCGRG 1 cut(s) 720
EcoRI GAATTC 2 cut(s) 205, 1141
EcoRII CCWGG 1 cut(s) 674
EcoRV GATATC 1 cut(s) 743
EcoT14I CCWWGG 2 cut(s) 478, 997
EcoT38I GRGCYC 1 cut(s) 224
ErhI CCWWGG 2 cut(s) 478, 997
FaeI CATG 6 cut(s) 482, 647, 788, 799, 975, 1141
FalI AAGNNNNNCTT 2 cut(s) 311, 343
FatI CATG 6 cut(s) 478, 643, 784, 795, 971, 1137
FauNDI CATATG 1 cut(s) 938
FbaI TGATCA 2 cut(s) 213, 628
FblI GTMKAC 1 cut(s) 363
Fnu4HI GCNGC 2 cut(s) 693, 1073
FokI GGATG 4 cut(s) 321, 461, 691, 1073
FriOI GRGCYC 1 cut(s) 224
Fsp4HI GCNGC 2 cut(s) 693, 1073
FspBI CTAG 3 cut(s) 531, 639, 1046
GluI GCNGC 2 cut(s) 693, 1073
HaeIII GGCC 1 cut(s) 1015
HapII CCGG 3 cut(s) 114, 707, 889
Hin1II CATG 6 cut(s) 482, 647, 788, 799, 975, 1141
HincII GTYRAC 2 cut(s) 987, 1105
HindII GTYRAC 2 cut(s) 987, 1105
HindIII AAGCTT 1 cut(s) 371
HpaI GTTAAC 1 cut(s) 1105
HpaII CCGG 3 cut(s) 114, 707, 889
HphI GGTGA 2 cut(s) 275, 955
Hpy166II GTNNAC 5 cut(s) 364, 813, 987, 1084, 1105
Hpy188I TCNGA 3 cut(s) 88, 179, 440
Hpy188III TCNNGA 7 cut(s) 125, 151, 217, 686, 707, 722, 796
Hpy8I GTNNAC 5 cut(s) 364, 813, 987, 1084, 1105
Hpy99I CGWCG 1 cut(s) 362
HpyAV CCTTC 1 cut(s) 293
HpyCH4III ACNGT 3 cut(s) 37, 619, 1102
HpyCH4IV ACGT 4 cut(s) 360, 582, 589, 800
HpyCH4V TGCA 7 cut(s) 195, 334, 404, 488, 766, 863, 1075
HpyF10VI GCNNNNNNNGC 1 cut(s) 192
HpyF3I CTNAG 2 cut(s) 318, 816
HpySE526I ACGT 4 cut(s) 360, 582, 589, 800
Hsp92II CATG 6 cut(s) 482, 647, 788, 799, 975, 1141
Kpn2I TCCGGA 1 cut(s) 706
Ksp22I TGATCA 2 cut(s) 213, 628
KspAI GTTAAC 1 cut(s) 1105
Kzo9I GATC 3 cut(s) 130, 213, 628
Lsp1109I GCAGC 2 cut(s) 679, 1059
LweI GCATC 4 cut(s) 343, 679, 828, 850
MaeI CTAG 3 cut(s) 531, 639, 1046
MaeII ACGT 4 cut(s) 360, 582, 589, 800
MaeIII GTNAC 4 cut(s) 657, 850, 1110, 1164
MalI GATC 3 cut(s) 132, 215, 630
MboI GATC 3 cut(s) 130, 213, 628
MboII GAAGA 3 cut(s) 140, 152, 303
MfeI CAATTG 1 cut(s) 980
MflI RGATCY 1 cut(s) 130
MhlI GDGCHC 1 cut(s) 224
MluCI AATT 9 cut(s) 118, 205, 469, 492, 872, 925, 930, 980, 1141
MlyI GAGTC 6 cut(s) 98, 103, 272, 691, 902, 1003
MmeI TCCRAC 3 cut(s) 288, 418, 986
MnlI CCTC 6 cut(s) 158, 394, 558, 660, 714, 729
MroI TCCGGA 1 cut(s) 706
MroXI GAANNNNTTC 1 cut(s) 303
MseI TTAA 7 cut(s) 173, 419, 714, 753, 1089, 1104, 1119
MslI CAYNNNNRTG 1 cut(s) 941
MspCI CTTAAG 1 cut(s) 1088
MspI CCGG 3 cut(s) 114, 707, 889
MspR9I CCNGG 3 cut(s) 114, 676, 890
MunI CAATTG 1 cut(s) 980
Mva1269I GAATGC 1 cut(s) 1186
MvaI CCWGG 1 cut(s) 676
MwoI GCNNNNNNNGC 1 cut(s) 192
NciI CCSGG 2 cut(s) 114, 890
NcoI CCATGG 1 cut(s) 478
NdeI CATATG 1 cut(s) 938
NdeII GATC 3 cut(s) 130, 213, 628
NlaIII CATG 6 cut(s) 482, 647, 788, 799, 975, 1141
NlaIV GGNNCC 4 cut(s) 381, 442, 500, 673
NmeAIII GCCGAG 1 cut(s) 991
NmuCI GTSAC 2 cut(s) 657, 850
NspV TTCGAA 2 cut(s) 52, 1178
PaeR7I CTCGAG 1 cut(s) 720
PagI TCATGA 1 cut(s) 795
PcsI WCGNNNNNNNCGW 1 cut(s) 58
PctI GAATGC 1 cut(s) 1186
PdmI GAANNNNTTC 1 cut(s) 303
PfeI GAWTC 4 cut(s) 180, 968, 976, 1175
PfoI TCCNGGA 1 cut(s) 674
PkrI GCNGC 2 cut(s) 694, 1074
PleI GAGTC 6 cut(s) 97, 102, 272, 690, 901, 1003
PpsI GAGTC 6 cut(s) 97, 102, 272, 690, 901, 1003
Ppu21I YACGTR 1 cut(s) 590
PshBI ATTAAT 1 cut(s) 173
Psp6I CCWGG 1 cut(s) 674
PspGI CCWGG 1 cut(s) 674
PspN4I GGNNCC 4 cut(s) 381, 442, 500, 673
PspPI GGNCC 1 cut(s) 1084
PstI CTGCAG 1 cut(s) 406
PsuI RGATCY 1 cut(s) 130
RsaI GTAC 3 cut(s) 111, 592, 1133
RsaNI GTAC 3 cut(s) 110, 591, 1132
RseI CAYNNNNRTG 1 cut(s) 941
SaqAI TTAA 7 cut(s) 173, 419, 714, 753, 1089, 1104, 1119
SatI GCNGC 2 cut(s) 693, 1073
Sau3AI GATC 3 cut(s) 130, 213, 628
Sau96I GGNCC 1 cut(s) 1084
SchI GAGTC 6 cut(s) 98, 103, 272, 691, 902, 1003
ScrFI CCNGG 3 cut(s) 114, 676, 890
SduI GDGCHC 1 cut(s) 224
SfaNI GCATC 4 cut(s) 343, 679, 828, 850
SfcI CTRYAG 2 cut(s) 402, 727
Sfr274I CTCGAG 1 cut(s) 720
SfuI TTCGAA 2 cut(s) 52, 1178
SinI GGWCC 1 cut(s) 1084
SlaI CTCGAG 1 cut(s) 720
SmiMI CAYNNNNRTG 1 cut(s) 941
SmlI CTYRAG 2 cut(s) 720, 1088
SmoI CTYRAG 2 cut(s) 720, 1088
SpeI ACTAGT 1 cut(s) 1045
Sse9I AATT 9 cut(s) 118, 205, 469, 492, 872, 925, 930, 980, 1141
SsiI CCGC 1 cut(s) 387
SspI AATATT 1 cut(s) 79
SspMI CTAG 3 cut(s) 531, 639, 1046
StyD4I CCNGG 3 cut(s) 112, 674, 888
StyI CCWWGG 2 cut(s) 478, 997
TaaI ACNGT 3 cut(s) 37, 619, 1102
TaiI ACGT 4 cut(s) 363, 585, 592, 803
TaqI TCGA 7 cut(s) 8, 52, 92, 314, 357, 721, 1178
TasI AATT 9 cut(s) 118, 205, 469, 492, 872, 925, 930, 980, 1141
TatI WGTACW 1 cut(s) 1131
TfiI GAWTC 4 cut(s) 180, 968, 976, 1175
Tru1I TTAA 7 cut(s) 173, 419, 714, 753, 1089, 1104, 1119
Tru9I TTAA 7 cut(s) 173, 419, 714, 753, 1089, 1104, 1119
TscAI CASTG 4 cut(s) 40, 666, 820, 1086
TseFI GTSAC 2 cut(s) 657, 850
TseI GCWGC 2 cut(s) 692, 1072
Tsp45I GTSAC 2 cut(s) 657, 850
TspDTI ATGAA 6 cut(s) 220, 936, 960, 962, 1056, 1154
TspGWI ACGGA 3 cut(s) 392, 1043, 1166
TspRI CASTG 4 cut(s) 40, 666, 820, 1086
Vha464I CTTAAG 1 cut(s) 1088
VpaK11BI GGWCC 1 cut(s) 1084
VspI ATTAAT 1 cut(s) 173
XapI RAATTY 4 cut(s) 205, 872, 925, 1141
XhoI CTCGAG 1 cut(s) 720
XmiI GTMKAC 1 cut(s) 363
XmnI GAANNNNTTC 1 cut(s) 303
XspI CTAG 3 cut(s) 531, 639, 1046
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.