MD03G1027900.v1.1

A Receptor for Ubiquitination Targets

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0000068
Physical Location & Seq
Forward (+)
2295969 .. 2297162
1194 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1027900.v1.1.491

Sequence Viewer

Length: 1194 bp
ATGGCTCACAATTTGCCGGAGGAAACCATACACGATATACTACATAGACTACCGCCGAAATCTTTGATCATATGCACCTCGGTGTGCAAGCCATGGAACTCCATGATAAAAAATCCGAGCTTTATACGCACCCACCTCACCCGTACAATCGATCTTAATAACCAGTTTGGCACCCACCTCCTCCTTGTGTGCTGTGCTCGTATAGTTAAACGGTCTAGATTCCGCCATGGTGACCCTGAGTTATTGGAGGAGCATTGCAATTTGCATTATGATAACCTTGCTTTTGATGAGCACTGCAAACTAGAATTTCCAATTGTTCCCAAGGAAGAACCGGGCAACAAAGTTTTAACAGTGGTCGGCGTTTGTAATGGGCTGGTGCTTCTTACGGATTGTATATTTTTTTCAGGTAACACCGTCATGTTATGCAACCCGTCTACGAGAAAGTCAGTGACCCTTCCCAAGCCTCATTATACCTTCAAAGGAGTTCGCGGTTATTACGATTGTATTGGTTTTGGTTTTGACGCTGTGACTACTGACTATAAGGTTGTGAGAATTACCTTTGAACAATGGCCCAATCCGAGTGCTTTTTATGAGGTTTATTCACTGGCTGGAGGCTCATGGAGTGATCCTTGTTCTTTGGATCACGTAAATGGACTTAAAAGAACTTGCAAACCCGTTTTTGTTAATGGTGCTATTCACTGGAAGGCATACCACCGTTTGACAAATGGTGGTTCTGAATATTTCATTTTGGCATTTGACGTGGGCAGCGACTCATTTCGCAGGATAATGACACCAGAGAATTTCAGAAGCTCAAGCGGCGAGGACTTCTATATTTCAGGTTACGGGAAATCTATTGCTCTGTCCAAGCGTTATTATACTAATATTCGAGAGCCTTGTCTTGATATATGGTTGATGAAAGAGTGTGGCATGGAAGAGTCATGGACCAAATTGACAACTCTATGTCCACCAGGTCCACAAACAGGAGTTGGCTACAGGCCATTATGTATTAGGAAGAGTGGTGATCTAGTGTTGGTACCGGCTGATGGTTATACTGGTAGGCATGAATTAATTTGTCTAGACCTTGTGAGCATGCAATTTAAAAGTCTTGGAATTCATGGATATAGATATTACTATGCCGAATCTTATGTTGAGAGCCTCGTCTTACTTGACAAGACCAATGCAGTTTCTTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_3

Protein Analysis

398

Amino Acids

45.08

Weight (kDa)

7.83

Isoelectric Point (pI)

35.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 4 - 42 1.5e-09 F-box domain
F-box-like PF12937 4 - 44 4e-09 F-box-like
b-prop_At3g26010-like PF24750 105 - 267 8.3e-08 F-box protein At3g26010-like, beta-propeller
FBA_1 PF07734 109 - 387 4.9e-21 F-box associated beta propeller domain
FBA_3 PF08268 133 - 377 3.6e-23 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1033
AccB1I GGYRCC 2 cut(s) 170, 1033
AccI GTMKAC 1 cut(s) 434
AccII CGCG 1 cut(s) 489
AciI CCGC 4 cut(s) 53, 223, 489, 816
AclWI GGATC 2 cut(s) 620, 648
AcsI RAATTY 3 cut(s) 305, 799, 1110
AfaI GTAC 2 cut(s) 145, 1035
AfiI CCNNNNNNNGG 2 cut(s) 980, 1043
AgsI TTSAA 2 cut(s) 478, 563
AjiI CACGTC 1 cut(s) 760
AjnI CCWGG 1 cut(s) 967
AleI CACNNNNGTG 1 cut(s) 80
AluBI AGCT 2 cut(s) 120, 810
AluI AGCT 2 cut(s) 120, 810
Alw21I GWGCWC 2 cut(s) 199, 294
AlwI GGATC 2 cut(s) 620, 648
AoxI GGCC 2 cut(s) 569, 995
ApeKI GCWGC 1 cut(s) 765
ApoI RAATTY 3 cut(s) 305, 799, 1110
AseI ATTAAT 1 cut(s) 1067
Asp718I GGTACC 1 cut(s) 1033
AspS9I GGNCC 3 cut(s) 570, 942, 971
AsuC2I CCSGG 1 cut(s) 333
AsuHPI GGTGA 3 cut(s) 130, 242, 1031
AvaII GGWCC 2 cut(s) 942, 971
BanI GGYRCC 2 cut(s) 170, 1033
Bbv12I GWGCWC 2 cut(s) 199, 294
BbvI GCAGC 1 cut(s) 777
BccI CCATC 1 cut(s) 1037
BciT130I CCWGG 1 cut(s) 969
BclI TGATCA 1 cut(s) 66
BcnI CCSGG 1 cut(s) 333
BfaI CTAG 4 cut(s) 216, 302, 1025, 1076
BfmI CTRYAG 1 cut(s) 991
BisI GCNGC 2 cut(s) 766, 817
BlsI GCNGC 2 cut(s) 767, 818
Bme1390I CCNGG 2 cut(s) 333, 969
Bme18I GGWCC 2 cut(s) 942, 971
BmgBI CACGTC 1 cut(s) 760
BmgT120I GGNCC 3 cut(s) 570, 942, 971
BmiI GGNNCC 2 cut(s) 172, 1035
BmrFI CCNGG 2 cut(s) 333, 969
BpmI CTGGAG 1 cut(s) 630
BpuEI CTTGAG 1 cut(s) 796
BpuMI CCSGG 1 cut(s) 333
Bsa29I ATCGAT 1 cut(s) 150
BsaAI YACGTR 1 cut(s) 646
BsaJI CCNNGG 4 cut(s) 78, 92, 226, 321
Bsc4I CCNNNNNNNGG 2 cut(s) 980, 1043
Bse118I RCCGGY 1 cut(s) 1036
Bse1I ACTGG 4 cut(s) 163, 609, 704, 1057
Bse3DI GCAATG 1 cut(s) 253
BseBI CCWGG 1 cut(s) 969
BseCI ATCGAT 1 cut(s) 150
BseDI CCNNGG 4 cut(s) 78, 92, 226, 321
BseLI CCNNNNNNNGG 2 cut(s) 980, 1043
BseMI GCAATG 1 cut(s) 253
BseMII CTCAG 1 cut(s) 228
BseNI ACTGG 4 cut(s) 163, 609, 704, 1057
BseRI GAGGAG 2 cut(s) 170, 263
BseXI GCAGC 1 cut(s) 777
Bsh1236I CGCG 1 cut(s) 489
BshFI GGCC 2 cut(s) 571, 997
BshNI GGYRCC 2 cut(s) 170, 1033
BshVI ATCGAT 1 cut(s) 150
BsiHKAI GWGCWC 2 cut(s) 199, 294
BsiSI CCGG 3 cut(s) 17, 332, 1037
BslI CCNNNNNNNGG 2 cut(s) 980, 1043
BsnI GGCC 2 cut(s) 571, 997
Bsp1286I GDGCHC 2 cut(s) 199, 294
Bsp143I GATC 5 cut(s) 66, 151, 625, 640, 1021
Bsp19I CCATGG 2 cut(s) 92, 226
BspACI CCGC 4 cut(s) 53, 223, 489, 816
BspANI GGCC 2 cut(s) 571, 997
BspCNI CTCAG 1 cut(s) 229
BspDI ATCGAT 1 cut(s) 150
BspFNI CGCG 1 cut(s) 489
BspLI GGNNCC 2 cut(s) 172, 1035
BspPI GGATC 2 cut(s) 620, 648
BspT107I GGYRCC 2 cut(s) 170, 1033
BsrDI GCAATG 1 cut(s) 253
BsrFI RCCGGY 1 cut(s) 1036
BsrI ACTGG 4 cut(s) 163, 609, 704, 1057
BssAI RCCGGY 1 cut(s) 1036
BssECI CCNNGG 4 cut(s) 78, 92, 226, 321
BssMI GATC 5 cut(s) 66, 151, 625, 640, 1021
BssT1I CCWWGG 3 cut(s) 92, 226, 321
Bst2UI CCWGG 1 cut(s) 969
Bst4CI ACNGT 4 cut(s) 213, 352, 415, 716
Bst6I CTCTTC 2 cut(s) 927, 1007
BstBAI YACGTR 1 cut(s) 646
BstC8I GCNNGC 2 cut(s) 89, 1091
BstDEI CTNAG 1 cut(s) 237
BstDSI CCRYGG 2 cut(s) 92, 226
BstEII GGTNACC 1 cut(s) 230
BstFNI CGCG 1 cut(s) 489
BstKTI GATC 5 cut(s) 69, 154, 628, 643, 1024
BstMBI GATC 5 cut(s) 66, 151, 625, 640, 1021
BstMWI GCNNNNNNNGC 2 cut(s) 126, 816
BstNI CCWGG 1 cut(s) 969
BstNSI RCATGY 1 cut(s) 1093
BstPI GGTNACC 1 cut(s) 230
BstSCI CCNGG 2 cut(s) 331, 967
BstSFI CTRYAG 1 cut(s) 991
BstUI CGCG 1 cut(s) 489
BstV1I GCAGC 1 cut(s) 777
Bsu15I ATCGAT 1 cut(s) 150
BsuRI GGCC 2 cut(s) 571, 997
BsuTUI ATCGAT 1 cut(s) 150
BtgI CCRYGG 2 cut(s) 92, 226
BtrI CACGTC 1 cut(s) 760
BtsI GCAGTG 1 cut(s) 292
BtsIMutI CAGTG 5 cut(s) 292, 357, 453, 602, 697
Cac8I GCNNGC 2 cut(s) 89, 1091
Cfr10I RCCGGY 1 cut(s) 1036
Cfr13I GGNCC 3 cut(s) 570, 942, 971
ClaI ATCGAT 1 cut(s) 150
CseI GACGC 1 cut(s) 530
CsiI ACCWGGT 1 cut(s) 967
Csp6I GTAC 2 cut(s) 144, 1034
CviQI GTAC 2 cut(s) 144, 1034
DdeI CTNAG 1 cut(s) 237
DpnI GATC 5 cut(s) 68, 153, 627, 642, 1023
DpnII GATC 5 cut(s) 66, 151, 625, 640, 1021
DraI TTTAAA 1 cut(s) 1099
Eam1104I CTCTTC 2 cut(s) 927, 1007
EarI CTCTTC 2 cut(s) 927, 1007
EciI GGCGGA 1 cut(s) 212
Eco130I CCWWGG 3 cut(s) 92, 226, 321
Eco47I GGWCC 2 cut(s) 942, 971
Eco91I GGTNACC 1 cut(s) 230
EcoO65I GGTNACC 1 cut(s) 230
EcoRI GAATTC 1 cut(s) 1110
EcoRII CCWGG 1 cut(s) 967
EcoT14I CCWWGG 3 cut(s) 92, 226, 321
ErhI CCWWGG 3 cut(s) 92, 226, 321
FauNDI CATATG 1 cut(s) 71
FbaI TGATCA 1 cut(s) 66
FblI GTMKAC 1 cut(s) 434
Fnu4HI GCNGC 2 cut(s) 766, 817
Fsp4HI GCNGC 2 cut(s) 766, 817
FspBI CTAG 4 cut(s) 216, 302, 1025, 1076
GluI GCNGC 2 cut(s) 766, 817
GsuI CTGGAG 1 cut(s) 630
HaeIII GGCC 2 cut(s) 571, 997
HapII CCGG 3 cut(s) 17, 332, 1037
HgaI GACGC 1 cut(s) 530
HinfI GANTC 4 cut(s) 219, 770, 935, 1139
HpaII CCGG 3 cut(s) 17, 332, 1037
HphI GGTGA 3 cut(s) 130, 242, 1031
Hpy166II GTNNAC 3 cut(s) 435, 965, 974
Hpy188I TCNGA 4 cut(s) 117, 579, 736, 806
Hpy188III TCNNGA 4 cut(s) 216, 887, 899, 1076
Hpy8I GTNNAC 3 cut(s) 435, 965, 974
HpyAV CCTTC 3 cut(s) 464, 484, 697
HpyCH4III ACNGT 4 cut(s) 213, 352, 415, 716
HpyCH4IV ACGT 2 cut(s) 645, 759
HpyCH4V TGCA 9 cut(s) 75, 87, 258, 265, 297, 426, 669, 1093, 1181
HpyF10VI GCNNNNNNNGC 2 cut(s) 126, 816
HpyF3I CTNAG 1 cut(s) 237
HpySE526I ACGT 2 cut(s) 645, 759
KpnI GGTACC 1 cut(s) 1037
Ksp22I TGATCA 1 cut(s) 66
Kzo9I GATC 5 cut(s) 66, 151, 625, 640, 1021
LmnI GCTCC 1 cut(s) 250
Lsp1109I GCAGC 1 cut(s) 777
MabI ACCWGGT 1 cut(s) 967
MaeI CTAG 4 cut(s) 216, 302, 1025, 1076
MaeII ACGT 2 cut(s) 645, 759
MaeIII GTNAC 5 cut(s) 230, 407, 448, 526, 839
MalI GATC 5 cut(s) 68, 153, 627, 642, 1023
MboI GATC 5 cut(s) 66, 151, 625, 640, 1021
MboII GAAGA 3 cut(s) 338, 944, 1024
MfeI CAATTG 1 cut(s) 312
MhlI GDGCHC 2 cut(s) 199, 294
MlyI GAGTC 2 cut(s) 764, 944
MseI TTAA 7 cut(s) 156, 207, 347, 657, 684, 1067, 1098
MslI CAYNNNNRTG 3 cut(s) 80, 416, 648
MspI CCGG 3 cut(s) 17, 332, 1037
MspR9I CCNGG 2 cut(s) 333, 969
MunI CAATTG 1 cut(s) 312
MvaI CCWGG 1 cut(s) 969
MvnI CGCG 1 cut(s) 489
MwoI GCNNNNNNNGC 2 cut(s) 126, 816
NciI CCSGG 1 cut(s) 333
NcoI CCATGG 2 cut(s) 92, 226
NdeI CATATG 1 cut(s) 71
NdeII GATC 5 cut(s) 66, 151, 625, 640, 1021
NlaIV GGNNCC 2 cut(s) 172, 1035
NmuCI GTSAC 3 cut(s) 230, 448, 526
NspI RCATGY 1 cut(s) 1093
OliI CACNNNNGTG 1 cut(s) 80
PaeI GCATGC 1 cut(s) 1093
PcsI WCGNNNNNNNCGW 1 cut(s) 765
PfeI GAWTC 2 cut(s) 219, 1139
PkrI GCNGC 2 cut(s) 767, 818
PleI GAGTC 2 cut(s) 764, 943
PpsI GAGTC 2 cut(s) 764, 943
Ppu21I YACGTR 1 cut(s) 646
PshBI ATTAAT 1 cut(s) 1067
Psp6I CCWGG 1 cut(s) 967
PspEI GGTNACC 1 cut(s) 230
PspGI CCWGG 1 cut(s) 967
PspN4I GGNNCC 2 cut(s) 172, 1035
PspPI GGNCC 3 cut(s) 570, 942, 971
RsaI GTAC 2 cut(s) 145, 1035
RsaNI GTAC 2 cut(s) 144, 1034
RseI CAYNNNNRTG 3 cut(s) 80, 416, 648
SaqAI TTAA 7 cut(s) 156, 207, 347, 657, 684, 1067, 1098
SatI GCNGC 2 cut(s) 766, 817
Sau3AI GATC 5 cut(s) 66, 151, 625, 640, 1021
Sau96I GGNCC 3 cut(s) 570, 942, 971
SchI GAGTC 2 cut(s) 764, 944
ScrFI CCNGG 2 cut(s) 333, 969
SduI GDGCHC 2 cut(s) 199, 294
SexAI ACCWGGT 1 cut(s) 967
SfcI CTRYAG 1 cut(s) 991
SinI GGWCC 2 cut(s) 942, 971
SmiMI CAYNNNNRTG 3 cut(s) 80, 416, 648
SmlI CTYRAG 1 cut(s) 811
SmoI CTYRAG 1 cut(s) 811
SphI GCATGC 1 cut(s) 1093
SsiI CCGC 4 cut(s) 53, 223, 489, 816
SspI AATATT 2 cut(s) 740, 883
SspMI CTAG 4 cut(s) 216, 302, 1025, 1076
StyD4I CCNGG 2 cut(s) 331, 967
StyI CCWWGG 3 cut(s) 92, 226, 321
TaaI ACNGT 4 cut(s) 213, 352, 415, 716
TaiI ACGT 2 cut(s) 648, 762
TaqI TCGA 2 cut(s) 150, 886
TauI GCSGC 1 cut(s) 819
TfiI GAWTC 2 cut(s) 219, 1139
Tru1I TTAA 7 cut(s) 156, 207, 347, 657, 684, 1067, 1098
Tru9I TTAA 7 cut(s) 156, 207, 347, 657, 684, 1067, 1098
TscAI CASTG 5 cut(s) 299, 357, 453, 609, 704
TseFI GTSAC 3 cut(s) 230, 448, 526
TseI GCWGC 1 cut(s) 765
Tsp45I GTSAC 3 cut(s) 230, 448, 526
TspDTI ATGAA 4 cut(s) 733, 929, 1077, 1103
TspGWI ACGGA 1 cut(s) 401
TspRI CASTG 5 cut(s) 299, 357, 453, 609, 704
VpaK11BI GGWCC 2 cut(s) 942, 971
VspI ATTAAT 1 cut(s) 1067
XapI RAATTY 3 cut(s) 305, 799, 1110
XbaI TCTAGA 2 cut(s) 215, 1075
XceI RCATGY 1 cut(s) 1093
XmiI GTMKAC 1 cut(s) 434
XspI CTAG 4 cut(s) 216, 302, 1025, 1076
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.