Rmu_sc0017252.1_g000002

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0017252.1
OG0000068
Physical Location & Seq
Reverse (-)
6962 .. 8576
1615 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0017252.1_g000002.1.cds

Sequence Viewer

Length: 1101 bp
atgaaactgcactgcctcgatccagcacctcacaatcctcaccaccgtcgattcagaatctatgctgcctccgatccaagtcactatcccagtctctggttagcacaaccgccggtcagcaatgatgccccagaaacgatgccaagccatccagtaaacctcgagtccaaacacccacccaaagagcgccctcgaaccatatacgtcgagaacccgtccggtagcaacctcaagacatcagcgccgctggaaccagcccagactgcagggcaccaccggatgagcacgaattcgcactctaaaaggccggctggagggtttctcaaggagagagggcagtgtgcatggaattctctgatcaagagttctactttcattctcacccatctcaagtccacattattaatccaatccaacaacaataaggacgaccttcttctgttacatgcccaacgcgagaaagagggtccgtttggtggtgagtttttcatgttggattgtgatgatatcaacgatgaatataccaagcgttgtgtaattccaacttctgacattaaagcagtttctccaatctatgaaggaagagaaatcaatgtggatcaacaaaatttctatccagttggaacttgcaacggcctcatcagcctggtttgtcatgatatggaaaaaccaatttcaataccaataatatggaatccttgtgttagaaagtttttggttcttcctagtccaagcttttcgccctacaaggttgcttttttcctttatgagttaggctatgattcacataacaatgacattaagcttgtacaaattgtggttccaaaatttcaagatgaccaaacaccatgtacctttcaagtgatttcattactcaggggctcttggaaggatcttaacgctcctgcagactttaaaccttttcctaatgatcttacaactgtggagattagtggtgctttgcattggatttgtgggaaactgtatactgagatcaatgaaagcacggtcattgtgacctttaacttgtctagtgaattatttgggaagatgaagattcctaaagctttgaaaaaagattcaactaagaaatcttgttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

366

Amino Acids

41.24

Weight (kDa)

7.99

Isoelectric Point (pI)

46.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 270
AccB7I CCANNNNNTGG 1 cut(s) 96
AccI GTMKAC 1 cut(s) 986
AccII CGCG 1 cut(s) 456
AciI CCGC 2 cut(s) 110, 245
AclWI GGATC 4 cut(s) 14, 68, 606, 900
AcsI RAATTY 4 cut(s) 289, 349, 607, 827
AfaI GTAC 2 cut(s) 810, 853
AfiI CCNNNNNNNGG 3 cut(s) 96, 314, 476
AgsI TTSAA 5 cut(s) 678, 833, 860, 1072, 1083
AjnI CCWGG 1 cut(s) 645
AluBI AGCT 3 cut(s) 735, 805, 1067
AluI AGCT 3 cut(s) 735, 805, 1067
Alw21I GWGCWC 1 cut(s) 287
Alw26I GTCTC 1 cut(s) 98
AlwI GGATC 4 cut(s) 14, 68, 606, 900
AlwNI CAGNNNCTG 1 cut(s) 96
Ama87I CYCGRG 1 cut(s) 161
AoxI GGCC 2 cut(s) 305, 634
ApeKI GCWGC 1 cut(s) 65
ApoI RAATTY 4 cut(s) 289, 349, 607, 827
AseI ATTAAT 1 cut(s) 404
AspLEI GCGC 2 cut(s) 189, 244
AspS9I GGNCC 1 cut(s) 467
AsuHPI GGTGA 3 cut(s) 32, 373, 491
AvaI CYCGRG 1 cut(s) 161
AvaII GGWCC 1 cut(s) 467
BaeGI GKGCMC 1 cut(s) 273
BanI GGYRCC 1 cut(s) 270
BanII GRGCYC 1 cut(s) 884
Bbv12I GWGCWC 1 cut(s) 287
BbvI GCAGC 1 cut(s) 52
BccI CCATC 2 cut(s) 156, 393
BceAI ACGGC 1 cut(s) 649
BciT130I CCWGG 1 cut(s) 647
BclI TGATCA 1 cut(s) 357
BcoDI GTCTC 1 cut(s) 98
BfaI CTAG 2 cut(s) 726, 1032
BfmI CTRYAG 2 cut(s) 264, 906
BfoI RGCGCY 2 cut(s) 190, 245
BisI GCNGC 2 cut(s) 66, 245
BlsI GCNGC 2 cut(s) 67, 246
Bme1390I CCNGG 1 cut(s) 647
Bme18I GGWCC 1 cut(s) 467
BmeT110I CYCGRG 1 cut(s) 161
BmgT120I GGNCC 1 cut(s) 467
BmiI GGNNCC 4 cut(s) 252, 272, 468, 822
BmrFI CCNGG 1 cut(s) 647
BmrI ACTGGG 1 cut(s) 84
BmsI GCATC 2 cut(s) 115, 129
BmuI ACTGGG 1 cut(s) 84
BplI GAGNNNNNCTC 2 cut(s) 306, 338
BpmI CTGGAG 1 cut(s) 333
BpuEI CTTGAG 3 cut(s) 215, 308, 374
BsaWI WCCGGW 2 cut(s) 218, 276
Bsc4I CCNNNNNNNGG 3 cut(s) 96, 314, 476
Bse118I RCCGGY 2 cut(s) 112, 307
Bse1I ACTGG 3 cut(s) 90, 152, 617
Bse3DI GCAATG 1 cut(s) 127
BseBI CCWGG 1 cut(s) 647
BseGI GGATG 2 cut(s) 148, 285
BseLI CCNNNNNNNGG 3 cut(s) 96, 314, 476
BseMI GCAATG 1 cut(s) 127
BseMII CTCAG 2 cut(s) 889, 981
BseNI ACTGG 3 cut(s) 90, 152, 617
BseSI GKGCMC 1 cut(s) 273
BseXI GCAGC 1 cut(s) 52
Bsh1236I CGCG 1 cut(s) 456
BshFI GGCC 2 cut(s) 307, 636
BshNI GGYRCC 1 cut(s) 270
BsiHKAI GWGCWC 1 cut(s) 287
BsiHKCI CYCGRG 1 cut(s) 161
BsiSI CCGG 4 cut(s) 113, 219, 277, 308
BslI CCNNNNNNNGG 3 cut(s) 96, 314, 476
BsmAI GTCTC 1 cut(s) 98
BsnI GGCC 2 cut(s) 307, 636
BsoBI CYCGRG 1 cut(s) 161
Bsp1286I GDGCHC 3 cut(s) 273, 287, 884
Bsp1407I TGTACA 1 cut(s) 808
Bsp143I GATC 7 cut(s) 19, 73, 357, 598, 892, 931, 993
BspACI CCGC 2 cut(s) 110, 245
BspANI GGCC 2 cut(s) 307, 636
BspCNI CTCAG 2 cut(s) 888, 982
BspFNI CGCG 1 cut(s) 456
BspHI TCATGA 1 cut(s) 655
BspLI GGNNCC 4 cut(s) 252, 272, 468, 822
BspMAI CTGCAG 2 cut(s) 268, 910
BspPI GGATC 4 cut(s) 14, 68, 606, 900
BspT107I GGYRCC 1 cut(s) 270
BsrDI GCAATG 1 cut(s) 127
BsrFI RCCGGY 2 cut(s) 112, 307
BsrGI TGTACA 1 cut(s) 808
BsrI ACTGG 3 cut(s) 90, 152, 617
BssAI RCCGGY 2 cut(s) 112, 307
BssMI GATC 7 cut(s) 19, 73, 357, 598, 892, 931, 993
BssNAI GTATAC 1 cut(s) 987
Bst1107I GTATAC 1 cut(s) 987
Bst2UI CCWGG 1 cut(s) 647
Bst4CI ACNGT 4 cut(s) 47, 943, 984, 1009
Bst6I CTCTTC 1 cut(s) 577
BstAUI TGTACA 1 cut(s) 808
BstC8I GCNNGC 1 cut(s) 309
BstDEI CTNAG 3 cut(s) 875, 990, 1086
BstF5I GGATG 2 cut(s) 148, 285
BstFNI CGCG 1 cut(s) 456
BstH2I RGCGCY 2 cut(s) 190, 245
BstHHI GCGC 2 cut(s) 189, 244
BstKTI GATC 7 cut(s) 22, 76, 360, 601, 895, 934, 996
BstMAI GTCTC 1 cut(s) 98
BstMBI GATC 7 cut(s) 19, 73, 357, 598, 892, 931, 993
BstMWI GCNNNNNNNGC 2 cut(s) 263, 642
BstNI CCWGG 1 cut(s) 647
BstNSI RCATGY 1 cut(s) 449
BstSCI CCNGG 1 cut(s) 645
BstSFI CTRYAG 2 cut(s) 264, 906
BstSLI GKGCMC 1 cut(s) 273
BstUI CGCG 1 cut(s) 456
BstV1I GCAGC 1 cut(s) 52
BstX2I RGATCY 1 cut(s) 892
BstXI CCANNNNNNTGG 1 cut(s) 690
BstYI RGATCY 1 cut(s) 892
BstZ17I GTATAC 1 cut(s) 987
BsuRI GGCC 2 cut(s) 307, 636
BtsCI GGATG 2 cut(s) 148, 285
BtsI GCAGTG 2 cut(s) 10, 344
BtsIMutI CAGTG 2 cut(s) 10, 344
Cac8I GCNNGC 1 cut(s) 309
CaiI CAGNNNCTG 1 cut(s) 96
CciI TCATGA 1 cut(s) 655
CfoI GCGC 2 cut(s) 189, 244
Cfr10I RCCGGY 2 cut(s) 112, 307
Cfr13I GGNCC 1 cut(s) 467
Csp6I GTAC 2 cut(s) 809, 852
CviAII CATG 5 cut(s) 345, 446, 490, 656, 849
CviQI GTAC 2 cut(s) 809, 852
DdeI CTNAG 3 cut(s) 875, 990, 1086
DpnI GATC 7 cut(s) 21, 75, 359, 600, 894, 933, 995
DpnII GATC 7 cut(s) 19, 73, 357, 598, 892, 931, 993
DraI TTTAAA 1 cut(s) 916
Eam1104I CTCTTC 1 cut(s) 577
EarI CTCTTC 1 cut(s) 577
Eco24I GRGCYC 1 cut(s) 884
Eco32I GATATC 1 cut(s) 508
Eco47I GGWCC 1 cut(s) 467
Eco88I CYCGRG 1 cut(s) 161
EcoRI GAATTC 2 cut(s) 289, 349
EcoRII CCWGG 1 cut(s) 645
EcoRV GATATC 1 cut(s) 508
EcoT38I GRGCYC 1 cut(s) 884
FaeI CATG 5 cut(s) 348, 449, 493, 659, 852
FatI CATG 5 cut(s) 344, 445, 489, 655, 848
FbaI TGATCA 1 cut(s) 357
FblI GTMKAC 1 cut(s) 986
Fnu4HI GCNGC 2 cut(s) 66, 245
FokI GGATG 2 cut(s) 135, 292
FriOI GRGCYC 1 cut(s) 884
Fsp4HI GCNGC 2 cut(s) 66, 245
FspBI CTAG 2 cut(s) 726, 1032
GlaI GCGC 2 cut(s) 188, 243
GluI GCNGC 2 cut(s) 66, 245
GsuI CTGGAG 1 cut(s) 333
HaeII RGCGCY 2 cut(s) 190, 245
HaeIII GGCC 2 cut(s) 307, 636
HapII CCGG 4 cut(s) 113, 219, 277, 308
HhaI GCGC 2 cut(s) 189, 244
Hin1II CATG 5 cut(s) 348, 449, 493, 659, 852
Hin6I GCGC 2 cut(s) 187, 242
HinP1I GCGC 2 cut(s) 187, 242
HindIII AAGCTT 3 cut(s) 733, 803, 1065
HinfI GANTC 7 cut(s) 51, 57, 164, 694, 782, 1057, 1079
HpaII CCGG 4 cut(s) 113, 219, 277, 308
HphI GGTGA 3 cut(s) 32, 373, 491
Hpy166II GTNNAC 3 cut(s) 157, 396, 987
Hpy188I TCNGA 4 cut(s) 56, 73, 357, 550
Hpy188III TCNNGA 5 cut(s) 208, 232, 361, 656, 833
Hpy8I GTNNAC 3 cut(s) 157, 396, 987
Hpy99I CGWCG 2 cut(s) 51, 209
HpyAV CCTTC 3 cut(s) 443, 572, 883
HpyCH4III ACNGT 4 cut(s) 47, 943, 984, 1009
HpyCH4IV ACGT 1 cut(s) 204
HpyCH4V TGCA 6 cut(s) 10, 266, 344, 630, 908, 964
HpyF10VI GCNNNNNNNGC 2 cut(s) 263, 642
HpyF3I CTNAG 3 cut(s) 875, 990, 1086
HpySE526I ACGT 1 cut(s) 204
Hsp92II CATG 5 cut(s) 348, 449, 493, 659, 852
HspAI GCGC 2 cut(s) 187, 242
KroI GCCGGC 1 cut(s) 307
KroNI GCCGGC 1 cut(s) 309
Ksp22I TGATCA 1 cut(s) 357
Kzo9I GATC 7 cut(s) 19, 73, 357, 598, 892, 931, 993
LmnI GCTCC 1 cut(s) 907
Lsp1109I GCAGC 1 cut(s) 52
LweI GCATC 2 cut(s) 115, 129
MaeI CTAG 2 cut(s) 726, 1032
MaeII ACGT 1 cut(s) 204
MaeIII GTNAC 3 cut(s) 80, 441, 1015
MalI GATC 7 cut(s) 21, 75, 359, 600, 894, 933, 995
MboI GATC 7 cut(s) 19, 73, 357, 598, 892, 931, 993
MboII GAAGA 5 cut(s) 428, 594, 713, 1060, 1066
MflI RGATCY 1 cut(s) 892
MhlI GDGCHC 3 cut(s) 273, 287, 884
MluCI AATT 8 cut(s) 289, 349, 537, 607, 672, 813, 827, 1037
MlyI GAGTC 1 cut(s) 173
MmeI TCCRAC 4 cut(s) 438, 474, 566, 601
MroNI GCCGGC 1 cut(s) 307
MseI TTAA 7 cut(s) 404, 555, 801, 897, 915, 1023, 1099
MslI CAYNNNNRTG 1 cut(s) 792
MspA1I CMGCKG 1 cut(s) 247
MspI CCGG 4 cut(s) 113, 219, 277, 308
MspR9I CCNGG 1 cut(s) 647
MvaI CCWGG 1 cut(s) 647
MvnI CGCG 1 cut(s) 456
MwoI GCNNNNNNNGC 2 cut(s) 263, 642
NaeI GCCGGC 1 cut(s) 309
NdeII GATC 7 cut(s) 19, 73, 357, 598, 892, 931, 993
NgoMIV GCCGGC 1 cut(s) 307
NlaIII CATG 5 cut(s) 348, 449, 493, 659, 852
NlaIV GGNNCC 4 cut(s) 252, 272, 468, 822
NmuCI GTSAC 2 cut(s) 80, 1015
NspI RCATGY 1 cut(s) 449
PaeR7I CTCGAG 1 cut(s) 161
PagI TCATGA 1 cut(s) 655
PdiI GCCGGC 1 cut(s) 309
PfeI GAWTC 6 cut(s) 51, 57, 694, 782, 1057, 1079
PflMI CCANNNNNTGG 1 cut(s) 96
PkrI GCNGC 2 cut(s) 67, 246
PleI GAGTC 1 cut(s) 172
PpsI GAGTC 1 cut(s) 172
PshBI ATTAAT 1 cut(s) 404
Psp6I CCWGG 1 cut(s) 645
PspGI CCWGG 1 cut(s) 645
PspN4I GGNNCC 4 cut(s) 252, 272, 468, 822
PspPI GGNCC 1 cut(s) 467
PspXI VCTCGAGB 1 cut(s) 161
PstI CTGCAG 2 cut(s) 268, 910
PstNI CAGNNNCTG 1 cut(s) 96
PsuI RGATCY 1 cut(s) 892
RsaI GTAC 2 cut(s) 810, 853
RsaNI GTAC 2 cut(s) 809, 852
RseI CAYNNNNRTG 1 cut(s) 792
SaqAI TTAA 7 cut(s) 404, 555, 801, 897, 915, 1023, 1099
SatI GCNGC 2 cut(s) 66, 245
Sau3AI GATC 7 cut(s) 19, 73, 357, 598, 892, 931, 993
Sau96I GGNCC 1 cut(s) 467
SchI GAGTC 1 cut(s) 173
ScrFI CCNGG 1 cut(s) 647
SduI GDGCHC 3 cut(s) 273, 287, 884
SfaNI GCATC 2 cut(s) 115, 129
SfcI CTRYAG 2 cut(s) 264, 906
Sfr274I CTCGAG 1 cut(s) 161
SinI GGWCC 1 cut(s) 467
SlaI CTCGAG 1 cut(s) 161
SmiMI CAYNNNNRTG 1 cut(s) 792
SmlI CTYRAG 4 cut(s) 161, 230, 323, 389
SmoI CTYRAG 4 cut(s) 161, 230, 323, 389
Sse9I AATT 8 cut(s) 289, 349, 537, 607, 672, 813, 827, 1037
SsiI CCGC 2 cut(s) 110, 245
SspMI CTAG 2 cut(s) 726, 1032
StyD4I CCNGG 1 cut(s) 645
TaaI ACNGT 4 cut(s) 47, 943, 984, 1009
TaiI ACGT 1 cut(s) 207
TaqI TCGA 5 cut(s) 18, 49, 162, 193, 207
TasI AATT 8 cut(s) 289, 349, 537, 607, 672, 813, 827, 1037
TatI WGTACW 1 cut(s) 808
TauI GCSGC 1 cut(s) 247
TfiI GAWTC 6 cut(s) 51, 57, 694, 782, 1057, 1079
Tru1I TTAA 7 cut(s) 404, 555, 801, 897, 915, 1023, 1099
Tru9I TTAA 7 cut(s) 404, 555, 801, 897, 915, 1023, 1099
TscAI CASTG 2 cut(s) 17, 344
TseFI GTSAC 2 cut(s) 80, 1015
TseI GCWGC 1 cut(s) 65
Tsp45I GTSAC 2 cut(s) 80, 1015
TspDTI ATGAA 8 cut(s) 17, 364, 478, 531, 591, 858, 1014, 1067
TspGWI ACGGA 1 cut(s) 459
TspRI CASTG 2 cut(s) 17, 344
Van91I CCANNNNNTGG 1 cut(s) 96
VpaK11BI GGWCC 1 cut(s) 467
VspI ATTAAT 1 cut(s) 404
XapI RAATTY 4 cut(s) 289, 349, 607, 827
XceI RCATGY 1 cut(s) 449
XhoI CTCGAG 1 cut(s) 161
XmiI GTMKAC 1 cut(s) 986
XspI CTAG 2 cut(s) 726, 1032
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.