MD09G1091100.v1.1

F-box kelch-repeat protein At3g23880-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
OG0000068
Physical Location & Seq
Forward (+)
6688466 .. 6689707
1242 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1091100.v1.1.491

Sequence Viewer

Length: 1242 bp
ATGTTCGACTCCCTTCCTCAGGAAATCACTCATGATATCCTATTTAGACTACCCATTAAATCTTTGATCCAATGCACCTCGGTGTGCAAGCCATGGAGGTCCATGATCATAAACCAAAGCTTCATTCAGTCCCACCTTAGGCAAAAAATCAGTTTCCATAATCAGAATGACATTCACCTCTTCCTAGTCCACAGTGTTTCTGGTCATCTTATAACTTCTGTTAGAACCCACCGCCACAGAACGGTTGTGTCCAAAATAAGACAAGAGGTTTTTTCTGTGCATTATGATAACCAGGATTTTGACAAGAACTTCGAGATAGAATTTCCGAGTGCTCTCAAGGAAGAACTGAAGAATGAAATTCTTCGCGTTGTTGGTATTTGTAATGGTCTGGTATGCTTTGCAGATGATATGGCATGTTATGGTAACAGCTTCATAATATGGAACCCAATAATTAGGAAGTCAGTAACCCTTCCCAATCCTGGTATTACTTTTCCCATGTATAACAGCATTCCCAATTATGGCGGGTTTGATGCTGCTATTGGATTCGGTTATGATGCGATGACATCTGACTATAAGGTTGTTAGAGTTGCCACCCCTAAAAATAAACTTCAAGGTCCAACCATGGCTGAAGTTTATTCACTAGCCACTGGCTCGTGGAGGAGTCTTGGTTCGGTTGCTCCTCAATGTGCAATATATGGAAGAGAAAAACACCTTTTTTTCAATGGGGCTCTTCATTGGCCTGCAGTAAGTAGGGCAAGGGATGATCATTTCATATTGACTTTTGACGTAGGCAATGAGTTATTTTGCAAGATGTCGATGCCATCGAGTGTCATATGGAGTTACATATTGGGATTGTTGTTGTCTGTTTCGGGTGACAAAAAATTTATAGCTCTATTTGTGATGAACGCCGATTCTAAAGATTCTTATCTTGAAATATGGGTGATGAAGGAGTATGGCGTGAAGGAGTCATGGACCAAATTGATTAATCTCGGTCCACAGGGTCCCGAAAGACTTTTTCCTCGGGCGTTATGTTTCAGAAGGAACGGTGAAGTATTAGTAATGCTTCTTAAAGGAGGCAGGCAACTTGGGTTCGAGACCAATATATCAAAGCATGAACTTGTTTCCCTGGACCTTGTCAGCAAACAAATGGAAAGTCTTGAGATTTGTGGACCATATTGCTCTGTTGATTCTTATGAAGAGAGCCTTCTCTTACCGGACAAGACCGATGCAGTTTCTCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

414

Amino Acids

46.83

Weight (kDa)

7.19

Isoelectric Point (pI)

40.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 2 - 39 4.4e-08 F-box-like
F-box PF00646 2 - 41 1.6e-07 F-box domain
FBA_1 PF07734 86 - 332 2.1e-29 F-box associated beta propeller domain
FBA_3 PF08268 91 - 333 4.4e-21 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 212
AccII CGCG 1 cut(s) 366
AciI CCGC 2 cut(s) 232, 522
AclWI GGATC 1 cut(s) 61
AcsI RAATTY 3 cut(s) 320, 357, 881
AcuI CTGAAG 2 cut(s) 368, 648
AfiI CCNNNNNNNGG 5 cut(s) 19, 138, 241, 479, 518
AgsI TTSAA 3 cut(s) 611, 721, 932
AjnI CCWGG 3 cut(s) 291, 478, 1125
AjuI GAANNNNNNNTTGG 2 cut(s) 108, 140
AleI CACNNNNGTG 1 cut(s) 80
AloI GAACNNNNNNTCC 2 cut(s) 652, 684
AluBI AGCT 3 cut(s) 120, 429, 890
AluI AGCT 3 cut(s) 120, 429, 890
Alw21I GWGCWC 1 cut(s) 334
Alw26I GTCTC 1 cut(s) 1088
AlwI GGATC 1 cut(s) 61
Ama87I CYCGRG 1 cut(s) 1020
AoxI GGCC 1 cut(s) 737
ApeKI GCWGC 1 cut(s) 533
ApoI RAATTY 3 cut(s) 320, 357, 881
ArsI GACNNNNNNTTYG 4 cut(s) 293, 325, 1138, 1170
AseI ATTAAT 1 cut(s) 984
Asp700I GAANNNNTTC 1 cut(s) 360
AspS9I GGNCC 7 cut(s) 99, 614, 972, 992, 1001, 1129, 1169
AsuHPI GGTGA 4 cut(s) 167, 884, 952, 1058
AvaI CYCGRG 1 cut(s) 1020
AvaII GGWCC 7 cut(s) 99, 614, 972, 992, 1001, 1129, 1169
AxyI CCTNAGG 2 cut(s) 18, 137
BanII GRGCYC 1 cut(s) 730
BauI CACGAG 1 cut(s) 652
Bbv12I GWGCWC 1 cut(s) 334
BbvI GCAGC 1 cut(s) 520
BccI CCATC 1 cut(s) 829
BciT130I CCWGG 3 cut(s) 293, 480, 1127
BclI TGATCA 2 cut(s) 105, 763
BcoDI GTCTC 1 cut(s) 1088
BfaI CTAG 2 cut(s) 185, 641
BfmI CTRYAG 1 cut(s) 741
BisI GCNGC 1 cut(s) 534
BlsI GCNGC 1 cut(s) 535
Bme1390I CCNGG 3 cut(s) 293, 480, 1127
Bme18I GGWCC 7 cut(s) 99, 614, 972, 992, 1001, 1129, 1169
BmeT110I CYCGRG 1 cut(s) 1020
BmgT120I GGNCC 7 cut(s) 99, 614, 972, 992, 1001, 1129, 1169
BmiI GGNNCC 3 cut(s) 443, 1002, 1003
BmrFI CCNGG 3 cut(s) 293, 480, 1127
BmsI GCATC 4 cut(s) 520, 544, 807, 1216
BpuEI CTTGAG 2 cut(s) 320, 1178
BsaBI GATNNNNATC 1 cut(s) 924
BsaI GGTCTC 1 cut(s) 1088
BsaJI CCNNGG 5 cut(s) 78, 92, 621, 1019, 1125
BsaWI WCCGGW 1 cut(s) 1213
BsaXI ACNNNNNCTCC 2 cut(s) 652, 682
Bsc4I CCNNNNNNNGG 5 cut(s) 19, 138, 241, 479, 518
Bse1I ACTGG 1 cut(s) 652
Bse21I CCTNAGG 2 cut(s) 18, 137
Bse3DI GCAATG 1 cut(s) 799
Bse8I GATNNNNATC 1 cut(s) 924
BseBI CCWGG 3 cut(s) 293, 480, 1127
BseDI CCNNGG 5 cut(s) 78, 92, 621, 1019, 1125
BseGI GGATG 1 cut(s) 766
BseJI GATNNNNATC 1 cut(s) 924
BseLI CCNNNNNNNGG 5 cut(s) 19, 138, 241, 479, 518
BseMI GCAATG 1 cut(s) 799
BseMII CTCAG 1 cut(s) 32
BseNI ACTGG 1 cut(s) 652
BseRI GAGGAG 2 cut(s) 669, 673
BseXI GCAGC 1 cut(s) 520
Bsh1236I CGCG 1 cut(s) 366
BshFI GGCC 1 cut(s) 739
BsiHKAI GWGCWC 1 cut(s) 334
BsiHKCI CYCGRG 1 cut(s) 1020
BsiSI CCGG 1 cut(s) 1214
BslFI GGGAC 2 cut(s) 115, 987
BslI CCNNNNNNNGG 5 cut(s) 19, 138, 241, 479, 518
BsmAI GTCTC 1 cut(s) 1088
BsmFI GGGAC 2 cut(s) 115, 987
BsmI GAATGC 1 cut(s) 507
BsnI GGCC 1 cut(s) 739
Bso31I GGTCTC 1 cut(s) 1088
BsoBI CYCGRG 1 cut(s) 1020
Bsp1286I GDGCHC 2 cut(s) 334, 730
Bsp143I GATC 3 cut(s) 66, 105, 763
Bsp19I CCATGG 2 cut(s) 92, 621
BspACI CCGC 2 cut(s) 232, 522
BspANI GGCC 1 cut(s) 739
BspCNI CTCAG 1 cut(s) 31
BspFNI CGCG 1 cut(s) 366
BspHI TCATGA 1 cut(s) 31
BspLI GGNNCC 3 cut(s) 443, 1002, 1003
BspMAI CTGCAG 1 cut(s) 745
BspPI GGATC 1 cut(s) 61
BspQI GCTCTTC 1 cut(s) 735
BspTNI GGTCTC 1 cut(s) 1088
BsrDI GCAATG 1 cut(s) 799
BsrI ACTGG 1 cut(s) 652
BssECI CCNNGG 5 cut(s) 78, 92, 621, 1019, 1125
BssMI GATC 3 cut(s) 66, 105, 763
BssSI CACGAG 1 cut(s) 652
BssT1I CCWWGG 2 cut(s) 92, 621
Bst2BI CACGAG 1 cut(s) 652
Bst2UI CCWGG 3 cut(s) 293, 480, 1127
Bst4CI ACNGT 3 cut(s) 194, 244, 1046
Bst6I CTCTTC 4 cut(s) 185, 694, 735, 1191
BstC8I GCNNGC 3 cut(s) 89, 741, 1079
BstDEI CTNAG 2 cut(s) 18, 137
BstDSI CCRYGG 2 cut(s) 92, 621
BstENI CCTNNNNNAGG 1 cut(s) 17
BstF5I GGATG 1 cut(s) 766
BstFNI CGCG 1 cut(s) 366
BstKTI GATC 3 cut(s) 69, 108, 766
BstMAI GTCTC 1 cut(s) 1088
BstMBI GATC 3 cut(s) 66, 105, 763
BstNI CCWGG 3 cut(s) 293, 480, 1127
BstNSI RCATGY 1 cut(s) 417
BstSCI CCNGG 3 cut(s) 291, 478, 1125
BstSFI CTRYAG 1 cut(s) 741
BstUI CGCG 1 cut(s) 366
BstV1I GCAGC 1 cut(s) 520
Bsu36I CCTNAGG 2 cut(s) 18, 137
BsuRI GGCC 1 cut(s) 739
BtgI CCRYGG 2 cut(s) 92, 621
BtgZI GCGATG 1 cut(s) 572
BtsCI GGATG 1 cut(s) 766
BtsIMutI CAGTG 2 cut(s) 199, 645
Cac8I GCNNGC 3 cut(s) 89, 741, 1079
CciI TCATGA 1 cut(s) 31
Cfr13I GGNCC 7 cut(s) 99, 614, 972, 992, 1001, 1129, 1169
CviAII CATG 8 cut(s) 32, 93, 103, 414, 496, 622, 969, 1112
DdeI CTNAG 2 cut(s) 18, 137
DpnI GATC 3 cut(s) 68, 107, 765
DpnII GATC 3 cut(s) 66, 105, 763
Eam1104I CTCTTC 4 cut(s) 185, 694, 735, 1191
EarI CTCTTC 4 cut(s) 185, 694, 735, 1191
Eco130I CCWWGG 2 cut(s) 92, 621
Eco24I GRGCYC 1 cut(s) 730
Eco31I GGTCTC 1 cut(s) 1088
Eco32I GATATC 1 cut(s) 37
Eco47I GGWCC 7 cut(s) 99, 614, 972, 992, 1001, 1129, 1169
Eco57I CTGAAG 2 cut(s) 368, 648
Eco81I CCTNAGG 2 cut(s) 18, 137
Eco88I CYCGRG 1 cut(s) 1020
EcoNI CCTNNNNNAGG 1 cut(s) 17
EcoO109I RGGNCCY 1 cut(s) 1001
EcoRII CCWGG 3 cut(s) 291, 478, 1125
EcoRV GATATC 1 cut(s) 37
EcoT14I CCWWGG 2 cut(s) 92, 621
EcoT38I GRGCYC 1 cut(s) 730
ErhI CCWWGG 2 cut(s) 92, 621
FaeI CATG 8 cut(s) 35, 96, 106, 417, 499, 625, 972, 1115
FalI AAGNNNNNCTT 2 cut(s) 1188, 1220
FaqI GGGAC 2 cut(s) 115, 987
FatI CATG 8 cut(s) 31, 92, 102, 413, 495, 621, 968, 1111
FauI CCCGC 1 cut(s) 515
FauNDI CATATG 1 cut(s) 833
FbaI TGATCA 2 cut(s) 105, 763
Fnu4HI GCNGC 1 cut(s) 534
FokI GGATG 1 cut(s) 773
FriOI GRGCYC 1 cut(s) 730
Fsp4HI GCNGC 1 cut(s) 534
FspBI CTAG 2 cut(s) 185, 641
GluI GCNGC 1 cut(s) 534
HaeIII GGCC 1 cut(s) 739
HapII CCGG 1 cut(s) 1214
Hin1II CATG 8 cut(s) 35, 96, 106, 417, 499, 625, 972, 1115
HindIII AAGCTT 1 cut(s) 118
HinfI GANTC 7 cut(s) 8, 543, 661, 911, 920, 965, 1187
HpaII CCGG 1 cut(s) 1214
HphI GGTGA 4 cut(s) 167, 884, 952, 1058
Hpy166II GTNNAC 3 cut(s) 190, 995, 1169
Hpy188I TCNGA 4 cut(s) 165, 327, 568, 1037
Hpy188III TCNNGA 7 cut(s) 20, 32, 313, 929, 1004, 1093, 1157
Hpy8I GTNNAC 3 cut(s) 190, 995, 1169
HpyAV CCTTC 6 cut(s) 23, 479, 940, 955, 1032, 1214
HpyCH4III ACNGT 3 cut(s) 194, 244, 1046
HpyCH4IV ACGT 1 cut(s) 786
HpyCH4V TGCA 8 cut(s) 75, 87, 280, 401, 689, 743, 807, 1229
HpyF3I CTNAG 2 cut(s) 18, 137
HpySE526I ACGT 1 cut(s) 786
Hsp92II CATG 8 cut(s) 35, 96, 106, 417, 499, 625, 972, 1115
KflI GGGWCCC 1 cut(s) 1001
Ksp22I TGATCA 2 cut(s) 105, 763
Kzo9I GATC 3 cut(s) 66, 105, 763
LguI GCTCTTC 1 cut(s) 735
LmnI GCTCC 1 cut(s) 682
Lsp1109I GCAGC 1 cut(s) 520
LweI GCATC 4 cut(s) 520, 544, 807, 1216
MaeI CTAG 2 cut(s) 185, 641
MaeII ACGT 1 cut(s) 786
MaeIII GTNAC 4 cut(s) 422, 463, 839, 872
MalI GATC 3 cut(s) 68, 107, 765
MboI GATC 3 cut(s) 66, 105, 763
MboII GAAGA 7 cut(s) 172, 353, 353, 361, 711, 722, 1208
MhlI GDGCHC 2 cut(s) 334, 730
MluCI AATT 6 cut(s) 320, 357, 450, 514, 881, 977
MlyI GAGTC 3 cut(s) 2, 670, 974
MmeI TCCRAC 1 cut(s) 641
MnlI CCTC 9 cut(s) 27, 88, 90, 188, 259, 651, 690, 1029, 1067
MroXI GAANNNNTTC 1 cut(s) 360
MseI TTAA 4 cut(s) 57, 984, 1068, 1240
MslI CAYNNNNRTG 1 cut(s) 80
MspI CCGG 1 cut(s) 1214
MspR9I CCNGG 3 cut(s) 293, 480, 1127
Mva1269I GAATGC 1 cut(s) 507
MvaI CCWGG 3 cut(s) 293, 480, 1127
MvnI CGCG 1 cut(s) 366
NcoI CCATGG 2 cut(s) 92, 621
NdeI CATATG 1 cut(s) 833
NdeII GATC 3 cut(s) 66, 105, 763
NlaIII CATG 8 cut(s) 35, 96, 106, 417, 499, 625, 972, 1115
NlaIV GGNNCC 3 cut(s) 443, 1002, 1003
NmuCI GTSAC 1 cut(s) 872
NspI RCATGY 1 cut(s) 417
OliI CACNNNNGTG 1 cut(s) 80
PagI TCATGA 1 cut(s) 31
PciSI GCTCTTC 1 cut(s) 735
PcsI WCGNNNNNNNCGW 1 cut(s) 821
PctI GAATGC 1 cut(s) 507
PdmI GAANNNNTTC 1 cut(s) 360
PfeI GAWTC 4 cut(s) 543, 911, 920, 1187
PflFI GACNNNGTC 1 cut(s) 1133
PkrI GCNGC 1 cut(s) 535
PleI GAGTC 3 cut(s) 2, 669, 973
PpsI GAGTC 3 cut(s) 2, 669, 973
PpuMI RGGWCCY 1 cut(s) 1001
PshBI ATTAAT 1 cut(s) 984
PsiI TTATAA 1 cut(s) 212
Psp5II RGGWCCY 1 cut(s) 1001
Psp6I CCWGG 3 cut(s) 291, 478, 1125
PspGI CCWGG 3 cut(s) 291, 478, 1125
PspN4I GGNNCC 3 cut(s) 443, 1002, 1003
PspPI GGNCC 7 cut(s) 99, 614, 972, 992, 1001, 1129, 1169
PspPPI RGGWCCY 1 cut(s) 1001
PstI CTGCAG 1 cut(s) 745
PsyI GACNNNGTC 1 cut(s) 1133
RseI CAYNNNNRTG 1 cut(s) 80
SapI GCTCTTC 1 cut(s) 735
SaqAI TTAA 4 cut(s) 57, 984, 1068, 1240
SatI GCNGC 1 cut(s) 534
Sau3AI GATC 3 cut(s) 66, 105, 763
Sau96I GGNCC 7 cut(s) 99, 614, 972, 992, 1001, 1129, 1169
SchI GAGTC 3 cut(s) 2, 670, 974
ScrFI CCNGG 3 cut(s) 293, 480, 1127
SduI GDGCHC 2 cut(s) 334, 730
SfaNI GCATC 4 cut(s) 520, 544, 807, 1216
SfcI CTRYAG 1 cut(s) 741
SinI GGWCC 7 cut(s) 99, 614, 972, 992, 1001, 1129, 1169
SmiMI CAYNNNNRTG 1 cut(s) 80
SmlI CTYRAG 2 cut(s) 335, 1157
SmoI CTYRAG 2 cut(s) 335, 1157
Sse9I AATT 6 cut(s) 320, 357, 450, 514, 881, 977
SsiI CCGC 2 cut(s) 232, 522
SspMI CTAG 2 cut(s) 185, 641
StyD4I CCNGG 3 cut(s) 291, 478, 1125
StyI CCWWGG 2 cut(s) 92, 621
TaaI ACNGT 3 cut(s) 194, 244, 1046
TaiI ACGT 1 cut(s) 789
TaqI TCGA 5 cut(s) 6, 312, 815, 824, 1092
TaqII GACCGA 2 cut(s) 980, 1238
TasI AATT 6 cut(s) 320, 357, 450, 514, 881, 977
TfiI GAWTC 4 cut(s) 543, 911, 920, 1187
Tru1I TTAA 4 cut(s) 57, 984, 1068, 1240
Tru9I TTAA 4 cut(s) 57, 984, 1068, 1240
TscAI CASTG 2 cut(s) 199, 652
TseFI GTSAC 1 cut(s) 872
TseI GCWGC 1 cut(s) 533
Tsp45I GTSAC 1 cut(s) 872
TspDTI ATGAA 9 cut(s) 112, 369, 421, 722, 760, 917, 959, 1128, 1209
TspRI CASTG 2 cut(s) 199, 652
Tth111I GACNNNGTC 1 cut(s) 1133
VpaK11BI GGWCC 7 cut(s) 99, 614, 972, 992, 1001, 1129, 1169
VspI ATTAAT 1 cut(s) 984
XagI CCTNNNNNAGG 1 cut(s) 17
XapI RAATTY 3 cut(s) 320, 357, 881
XceI RCATGY 1 cut(s) 417
XcmI CCANNNNNNNNNTGG 1 cut(s) 197
XmnI GAANNNNTTC 1 cut(s) 360
XspI CTAG 2 cut(s) 185, 641
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.