FvH4_5g35130

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000068
Physical Location & Seq
Forward (+)
25684285 .. 25686631
2347 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g35130.t1

Sequence Viewer

Length: 978 bp
ATGTCAGATTTCTTTCCTGAAGAAATCCTAGAAAAAATCCTGTTGAGGCTGCCCGTCAAAACCCTAATCAAATCCACCACACTCTGCAAGTCATGGTTGTCACTGATCAAAACCTCTACCTTCGTTCAATCCCATCTCTGCACCACAATCGATTCCAACAATCAAACCAACGCTCACCTCCTCCTCCTCAGCGCTTTCTCCCACTCCAAAGAAAACATGTGTTATGAGCATCACTGGTTGCATTGGGATAGCCCTGAATTTGGTCAGTATCCCAAGCTTTCCAATCCATTCCCCCTCTTCTCAGACGAAATCGGTCCGCGTGTTTTCGGAACCTGTAACGGGCTTGTGTGCCTTGAGAGTTATAATTGGCGCATCAGGTCTTGTTCTCCCGCCGTGATTTGGAATCCTTCCATTCTAAAGATTGTGAAGTTTCCTACACCGCCTCCTTGTTTTACCTCTACCAAATACCTCCATTACAGAAAACACCAATCGCATGGCTTTGGCTATGATTCACATTCTAATGACTATAAGGTTTTGAGAGTTGTTAGTCTTTCTGATGATCATTCGGATGTGTCCCGATTCACCACTGTGGTTCAGGTTTACTCCTTGGCCAGGGGATCTTGGAGGAGTCTTAGTGCTTCTGCTGTTCCGGTGGATTTGCAAGCCGGTGGTTCGGAACGTCCTGATTTTGTTAATGGCTGTTTGCATATGCTTGAAGTACGTTTAGATGTGTATTACGATGATCATCACCAAGAACACCGTAAGCGTGGAGGAGACTTCATTGCCTACTTTAATCTCACCACTGAAGTATTTGGTGAGATAATGATACCGGAAGCTTTGCGAAGAGATGACTGCTCTAGATCGAGATATGAAGAGTCCCTTGCCTTGATTAAGGATAAACAGTATAATCCGAATGATCCAGCTAATTGTGGTTGTGACATTTGGGTTATGAAAGAGTATGGTGTAGCAGAGTCGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

326

Amino Acids

37.28

Weight (kDa)

6.3

Isoelectric Point (pI)

46.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 5 - 41 1.6e-06 F-box domain
FBA_3 PF08268 107 - 319 2e-13 F-box associated beta propeller domain
FBA_1 PF07734 109 - 320 4.5e-15 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 363
AccII CGCG 1 cut(s) 319
AciI CCGC 3 cut(s) 317, 390, 440
AclWI GGATC 2 cut(s) 625, 911
AcoI YGGCCR 1 cut(s) 609
AcsI RAATTY 1 cut(s) 257
AcuI CTGAAG 2 cut(s) 39, 825
AfaI GTAC 1 cut(s) 720
AfeI AGCGCT 1 cut(s) 193
AfiI CCNNNNNNNGG 4 cut(s) 260, 339, 399, 612
AflIII ACRYGT 1 cut(s) 216
AgsI TTSAA 2 cut(s) 128, 716
AjnI CCWGG 1 cut(s) 611
AleI CACNNNNGTG 1 cut(s) 587
AluBI AGCT 3 cut(s) 277, 836, 923
AluI AGCT 3 cut(s) 277, 836, 923
Alw26I GTCTC 1 cut(s) 768
AlwI GGATC 2 cut(s) 625, 911
Aor51HI AGCGCT 1 cut(s) 193
AoxI GGCC 1 cut(s) 609
ApeKI GCWGC 1 cut(s) 49
ApoI RAATTY 1 cut(s) 257
AspLEI GCGC 2 cut(s) 194, 372
AspS9I GGNCC 1 cut(s) 314
AsuHPI GGTGA 5 cut(s) 167, 574, 740, 790, 827
AvaII GGWCC 1 cut(s) 314
BalI TGGCCA 1 cut(s) 611
BbvCI CCTCAGC 1 cut(s) 188
BbvI GCAGC 1 cut(s) 36
BccI CCATC 1 cut(s) 141
BceAI ACGGC 1 cut(s) 377
BcgI CGANNNNNNTGC 2 cut(s) 130, 164
BciT130I CCWGG 1 cut(s) 613
BciVI GTATCC 1 cut(s) 279
BclI TGATCA 3 cut(s) 105, 559, 742
BcoDI GTCTC 1 cut(s) 768
BfaI CTAG 2 cut(s) 29, 858
BfoI RGCGCY 1 cut(s) 195
BfuI GTATCC 1 cut(s) 279
BisI GCNGC 1 cut(s) 50
BlsI GCNGC 1 cut(s) 51
Bme1390I CCNGG 1 cut(s) 613
Bme18I GGWCC 1 cut(s) 314
BmgT120I GGNCC 1 cut(s) 314
BmiI GGNNCC 1 cut(s) 331
BmrFI CCNGG 1 cut(s) 613
BmsI GCATC 2 cut(s) 238, 381
Bpu10I CCTNAGC 1 cut(s) 188
BpuEI CTTGAG 1 cut(s) 374
Bsa29I ATCGAT 1 cut(s) 150
BsaBI GATNNNNATC 1 cut(s) 744
BsaJI CCNNGG 2 cut(s) 606, 612
BsaWI WCCGGW 2 cut(s) 649, 829
BsaXI ACNNNNNCTCC 4 cut(s) 427, 457, 619, 649
Bsc4I CCNNNNNNNGG 4 cut(s) 260, 339, 399, 612
Bse118I RCCGGY 1 cut(s) 665
Bse1I ACTGG 1 cut(s) 239
Bse3DI GCAATG 1 cut(s) 780
Bse8I GATNNNNATC 1 cut(s) 744
BseBI CCWGG 1 cut(s) 613
BseCI ATCGAT 1 cut(s) 150
BseDI CCNNGG 2 cut(s) 606, 612
BseGI GGATG 1 cut(s) 574
BseJI GATNNNNATC 1 cut(s) 744
BseLI CCNNNNNNNGG 4 cut(s) 260, 339, 399, 612
BseMI GCAATG 1 cut(s) 780
BseMII CTCAG 2 cut(s) 202, 315
BseNI ACTGG 1 cut(s) 239
BseRI GAGGAG 5 cut(s) 170, 173, 176, 640, 786
BseXI GCAGC 1 cut(s) 36
BsgI GTGCAG 1 cut(s) 124
Bsh1236I CGCG 1 cut(s) 319
BshFI GGCC 1 cut(s) 611
BshVI ATCGAT 1 cut(s) 150
BsiSI CCGG 3 cut(s) 650, 666, 830
BslFI GGGAC 2 cut(s) 559, 862
BslI CCNNNNNNNGG 4 cut(s) 260, 339, 399, 612
BsmAI GTCTC 1 cut(s) 768
BsmFI GGGAC 2 cut(s) 559, 862
BsnI GGCC 1 cut(s) 611
Bsp143I GATC 6 cut(s) 105, 559, 617, 742, 860, 916
BspACI CCGC 3 cut(s) 317, 390, 440
BspANI GGCC 1 cut(s) 611
BspCNI CTCAG 2 cut(s) 201, 314
BspDI ATCGAT 1 cut(s) 150
BspFNI CGCG 1 cut(s) 319
BspLI GGNNCC 1 cut(s) 331
BspPI GGATC 2 cut(s) 625, 911
BsrDI GCAATG 1 cut(s) 780
BsrFI RCCGGY 1 cut(s) 665
BsrI ACTGG 1 cut(s) 239
BssAI RCCGGY 1 cut(s) 665
BssECI CCNNGG 2 cut(s) 606, 612
BssMI GATC 6 cut(s) 105, 559, 617, 742, 860, 916
BssT1I CCWWGG 1 cut(s) 606
Bst2UI CCWGG 1 cut(s) 613
Bst4CI ACNGT 3 cut(s) 589, 761, 903
Bst6I CTCTTC 3 cut(s) 302, 838, 867
BstC8I GCNNGC 1 cut(s) 663
BstDEI CTNAG 3 cut(s) 188, 301, 632
BstENI CCTNNNNNAGG 1 cut(s) 610
BstF5I GGATG 1 cut(s) 574
BstFNI CGCG 1 cut(s) 319
BstH2I RGCGCY 1 cut(s) 195
BstHHI GCGC 2 cut(s) 194, 372
BstKTI GATC 6 cut(s) 108, 562, 620, 745, 863, 919
BstMAI GTCTC 1 cut(s) 768
BstMBI GATC 6 cut(s) 105, 559, 617, 742, 860, 916
BstNI CCWGG 1 cut(s) 613
BstNSI RCATGY 1 cut(s) 220
BstSCI CCNGG 1 cut(s) 611
BstUI CGCG 1 cut(s) 319
BstV1I GCAGC 1 cut(s) 36
BstX2I RGATCY 1 cut(s) 617
BstXI CCANNNNNNTGG 1 cut(s) 494
BstYI RGATCY 1 cut(s) 617
Bsu15I ATCGAT 1 cut(s) 150
BsuI GTATCC 1 cut(s) 279
BsuRI GGCC 1 cut(s) 611
BsuTUI ATCGAT 1 cut(s) 150
BtsCI GGATG 1 cut(s) 574
BtsIMutI CAGTG 4 cut(s) 101, 232, 585, 801
Cac8I GCNNGC 1 cut(s) 663
CfoI GCGC 2 cut(s) 194, 372
Cfr10I RCCGGY 1 cut(s) 665
Cfr13I GGNCC 1 cut(s) 314
ClaI ATCGAT 1 cut(s) 150
CpoI CGGWCCG 1 cut(s) 314
Csp6I GTAC 1 cut(s) 719
CspI CGGWCCG 1 cut(s) 314
CviAII CATG 3 cut(s) 93, 217, 494
CviQI GTAC 1 cut(s) 719
DdeI CTNAG 3 cut(s) 188, 301, 632
DpnI GATC 6 cut(s) 107, 561, 619, 744, 862, 918
DpnII GATC 6 cut(s) 105, 559, 617, 742, 860, 916
EaeI YGGCCR 1 cut(s) 609
Eam1104I CTCTTC 3 cut(s) 302, 838, 867
EarI CTCTTC 3 cut(s) 302, 838, 867
Eco130I CCWWGG 1 cut(s) 606
Eco47I GGWCC 1 cut(s) 314
Eco47III AGCGCT 1 cut(s) 193
Eco57I CTGAAG 2 cut(s) 39, 825
EcoNI CCTNNNNNAGG 1 cut(s) 610
EcoRII CCWGG 1 cut(s) 611
EcoT14I CCWWGG 1 cut(s) 606
ErhI CCWWGG 1 cut(s) 606
FaeI CATG 3 cut(s) 96, 220, 497
FalI AAGNNNNNCTT 2 cut(s) 864, 896
FaqI GGGAC 2 cut(s) 559, 862
FatI CATG 3 cut(s) 92, 216, 493
FauI CCCGC 1 cut(s) 397
FauNDI CATATG 1 cut(s) 708
FbaI TGATCA 3 cut(s) 105, 559, 742
Fnu4HI GCNGC 1 cut(s) 50
FokI GGATG 1 cut(s) 581
Fsp4HI GCNGC 1 cut(s) 50
FspBI CTAG 2 cut(s) 29, 858
GlaI GCGC 2 cut(s) 193, 371
GluI GCNGC 1 cut(s) 50
HaeII RGCGCY 1 cut(s) 195
HaeIII GGCC 1 cut(s) 611
HapII CCGG 3 cut(s) 650, 666, 830
HhaI GCGC 2 cut(s) 194, 372
Hin1II CATG 3 cut(s) 96, 220, 497
Hin6I GCGC 2 cut(s) 192, 370
HinP1I GCGC 2 cut(s) 192, 370
HindIII AAGCTT 2 cut(s) 275, 834
HinfI GANTC 7 cut(s) 152, 403, 509, 579, 628, 875, 971
HpaII CCGG 3 cut(s) 650, 666, 830
HphI GGTGA 5 cut(s) 167, 574, 740, 790, 827
Hpy166II GTNNAC 1 cut(s) 601
Hpy188I TCNGA 7 cut(s) 7, 304, 329, 556, 568, 676, 912
Hpy188III TCNNGA 5 cut(s) 17, 576, 683, 858, 864
Hpy8I GTNNAC 1 cut(s) 601
HpyAV CCTTC 2 cut(s) 130, 417
HpyCH4III ACNGT 3 cut(s) 589, 761, 903
HpyCH4IV ACGT 2 cut(s) 679, 721
HpyCH4V TGCA 5 cut(s) 87, 141, 241, 661, 706
HpyF3I CTNAG 3 cut(s) 188, 301, 632
HpySE526I ACGT 2 cut(s) 679, 721
Hsp92II CATG 3 cut(s) 96, 220, 497
HspAI GCGC 2 cut(s) 192, 370
Ksp22I TGATCA 3 cut(s) 105, 559, 742
Kzo9I GATC 6 cut(s) 105, 559, 617, 742, 860, 916
Lsp1109I GCAGC 1 cut(s) 36
LweI GCATC 2 cut(s) 238, 381
MaeI CTAG 2 cut(s) 29, 858
MaeII ACGT 2 cut(s) 679, 721
MaeIII GTNAC 3 cut(s) 99, 335, 935
MalI GATC 6 cut(s) 107, 561, 619, 744, 862, 918
MboI GATC 6 cut(s) 105, 559, 617, 742, 860, 916
MboII GAAGA 4 cut(s) 32, 289, 855, 884
MflI RGATCY 1 cut(s) 617
MlsI TGGCCA 1 cut(s) 611
MluCI AATT 3 cut(s) 257, 364, 925
MluNI TGGCCA 1 cut(s) 611
MlyI GAGTC 2 cut(s) 637, 884
MmeI TCCRAC 1 cut(s) 180
Mox20I TGGCCA 1 cut(s) 611
MscI TGGCCA 1 cut(s) 611
MseI TTAA 3 cut(s) 693, 792, 891
MslI CAYNNNNRTG 3 cut(s) 519, 567, 587
Msp20I TGGCCA 1 cut(s) 611
MspI CCGG 3 cut(s) 650, 666, 830
MspR9I CCNGG 1 cut(s) 613
MvaI CCWGG 1 cut(s) 613
MvnI CGCG 1 cut(s) 319
NdeI CATATG 1 cut(s) 708
NdeII GATC 6 cut(s) 105, 559, 617, 742, 860, 916
NlaIII CATG 3 cut(s) 96, 220, 497
NlaIV GGNNCC 1 cut(s) 331
NmuCI GTSAC 2 cut(s) 99, 935
NspI RCATGY 1 cut(s) 220
OliI CACNNNNGTG 1 cut(s) 587
PciI ACATGT 1 cut(s) 216
PfeI GAWTC 4 cut(s) 152, 403, 509, 579
PkrI GCNGC 1 cut(s) 51
PleI GAGTC 2 cut(s) 636, 883
PpsI GAGTC 2 cut(s) 636, 883
PscI ACATGT 1 cut(s) 216
PsiI TTATAA 1 cut(s) 363
Psp6I CCWGG 1 cut(s) 611
PspGI CCWGG 1 cut(s) 611
PspN4I GGNNCC 1 cut(s) 331
PspPI GGNCC 1 cut(s) 314
PsuI RGATCY 1 cut(s) 617
RsaI GTAC 1 cut(s) 720
RsaNI GTAC 1 cut(s) 719
RseI CAYNNNNRTG 3 cut(s) 519, 567, 587
Rsr2I CGGWCCG 1 cut(s) 314
RsrII CGGWCCG 1 cut(s) 314
SaqAI TTAA 3 cut(s) 693, 792, 891
SatI GCNGC 1 cut(s) 50
Sau3AI GATC 6 cut(s) 105, 559, 617, 742, 860, 916
Sau96I GGNCC 1 cut(s) 314
SchI GAGTC 2 cut(s) 637, 884
ScrFI CCNGG 1 cut(s) 613
SfaNI GCATC 2 cut(s) 238, 381
SinI GGWCC 1 cut(s) 314
SmiMI CAYNNNNRTG 3 cut(s) 519, 567, 587
SmlI CTYRAG 1 cut(s) 353
SmoI CTYRAG 1 cut(s) 353
Sse9I AATT 3 cut(s) 257, 364, 925
SsiI CCGC 3 cut(s) 317, 390, 440
SspMI CTAG 2 cut(s) 29, 858
StyD4I CCNGG 1 cut(s) 611
StyI CCWWGG 1 cut(s) 606
TaaI ACNGT 3 cut(s) 589, 761, 903
TaiI ACGT 2 cut(s) 682, 724
TaqI TCGA 2 cut(s) 150, 863
TaqII GACCGA 1 cut(s) 302
TasI AATT 3 cut(s) 257, 364, 925
TfiI GAWTC 4 cut(s) 152, 403, 509, 579
Tru1I TTAA 3 cut(s) 693, 792, 891
Tru9I TTAA 3 cut(s) 693, 792, 891
TscAI CASTG 4 cut(s) 108, 239, 592, 808
TseFI GTSAC 2 cut(s) 99, 935
TseI GCWGC 1 cut(s) 49
Tsp45I GTSAC 2 cut(s) 99, 935
TspDTI ATGAA 3 cut(s) 769, 885, 965
TspRI CASTG 4 cut(s) 108, 239, 592, 808
VpaK11BI GGWCC 1 cut(s) 314
XagI CCTNNNNNAGG 1 cut(s) 610
XapI RAATTY 1 cut(s) 257
XbaI TCTAGA 1 cut(s) 857
XceI RCATGY 1 cut(s) 220
XspI CTAG 2 cut(s) 29, 858
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.