Rh2CG526300

MatE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0000068
Physical Location & Seq
Forward (+)
70138157 .. 70170760
32604 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG526300.1

Sequence Viewer

Length: 1119 bp
ATGTTGGATTGTGATGATATCAACGATGAGTATACCAAGCGTCGCGTAATTCCAACTTCTGACATTAAAGCAGTTTCTCCAATCTATGAAGGAAGAGAAATCAATGTGGATCAACAAAATTTCTATCCAGTTGGAACTTGCAACGGCCTCATCTGCCTGGTTTGTCTTGATACGGAAAAACGAATTTCAATACCAATAATATGGAATCCTTGTGTTAGAAAGTTTTTGGTTCTTCCTAGTCCAAGCTTTTCGCCCTACGAGGTTGCTTTTTTCCTCTATGAATTAGGCTATGATTCACATAACAATGACATCAAGCTTGTGCAAATTGTGGTTCCAAAATTTCAAGATGACCAAACGCCATGTACCTTTCAAGTTTTTTCATTACTCAGGGGCTCTTGGAAAGATCTTAACGCTCCTGCAGACTTTAAACCTTTTCTTAATGATCTTAGAGCTGTGGAGGCCGAGGCTGTTGGATTTCGTTACGGCATTGGACGAATCGGTGGTGAAGTGGAGACAGTAATAGCTGTTTCTTGCATCTTTGGTTTTTGGGTTCGCTTCTGGAATTTGGAACCTCAAGTGCAGAAGGCCTCGGAGTGCAAGCTAACGAAGAGTGCTCTACTACATGAAAATTCTATTTCAGGATGGGTGTTCATGATCTCAGTTGGGTTAAATGCAGCTGCAAGTGTGCGAGTAAGCAATGAGCTTGGAGCCGAAAATCCCAAGTCCACATCATTTTCTGTCATCGTGGTGACTACGATCTCCTTCATCATCTCCGTCATTGCAGCAATCGTTGTTCTTATTTTTTGTGATGTTATCAGCTACGCCTTCACAGAGGGTGAAGTCGTGGCCGCTGCTGTCTCAGATCTTACCCCTCTTCGTGCCCTCACCCTCCTCCTCAATGGAATTCAGCTAGTCTTGTCCGGTGTTGCTGTTGGGTGTGGATGGCAAGCTTTTGTGGCGTATGTAAATGTGGGCTGTTATTACTTTGTTGGAGTACCACTTGGTGCCCTTCTTGGATTTTACTTCAACTTTGGCGCTAAGGGAATATGGTTAGTGTTGGTGGAAGAGGTAGCCAAAAGGTTGAACAAGTGGGACGAGAAGGAACCCGTAAAAGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MatE

Protein Analysis

372

Amino Acids

41.12

Weight (kDa)

5.01

Isoelectric Point (pI)

30.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FBA_1 PF07734 35 - 140 9.9e-09 F-box associated beta propeller domain
FBA_3 PF08268 37 - 141 2.6e-08 F-box associated beta propeller domain
MatE PF01554 210 - 336 1.6e-22 MatE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1004
AccI GTMKAC 1 cut(s) 32
AccII CGCG 1 cut(s) 45
AciI CCGC 1 cut(s) 849
AclWI GGATC 1 cut(s) 117
AcoI YGGCCR 1 cut(s) 846
AcsI RAATTY 6 cut(s) 118, 183, 338, 562, 628, 903
AdeI CACNNNGTG 1 cut(s) 1004
AfaI GTAC 2 cut(s) 364, 996
AfiI CCNNNNNNNGG 1 cut(s) 1112
AgsI TTSAA 5 cut(s) 189, 344, 371, 1027, 1084
AjnI CCWGG 1 cut(s) 156
Alw21I GWGCWC 1 cut(s) 616
Alw26I GTCTC 2 cut(s) 506, 862
AlwI GGATC 1 cut(s) 117
AoxI GGCC 4 cut(s) 145, 459, 585, 846
ApeKI GCWGC 4 cut(s) 674, 677, 782, 851
ApoI RAATTY 6 cut(s) 118, 183, 338, 562, 628, 903
AspLEI GCGC 1 cut(s) 1037
AsuHPI GGTGA 4 cut(s) 515, 760, 848, 877
BaeGI GKGCMC 2 cut(s) 883, 1009
BanI GGYRCC 1 cut(s) 1004
BanII GRGCYC 1 cut(s) 395
Bbv12I GWGCWC 1 cut(s) 616
BbvI GCAGC 4 cut(s) 664, 686, 794, 838
BccI CCATC 2 cut(s) 636, 936
BceAI ACGGC 2 cut(s) 160, 499
BciT130I CCWGG 1 cut(s) 158
BcoDI GTCTC 2 cut(s) 506, 862
BfaI CTAG 2 cut(s) 237, 911
BfmI CTRYAG 1 cut(s) 417
BfoI RGCGCY 1 cut(s) 1038
BglII AGATCT 2 cut(s) 403, 862
BisI GCNGC 5 cut(s) 675, 678, 783, 849, 852
BlsI GCNGC 5 cut(s) 676, 679, 784, 850, 853
Bme1390I CCNGG 1 cut(s) 158
BmiI GGNNCC 5 cut(s) 333, 570, 709, 1006, 1104
BmrFI CCNGG 1 cut(s) 158
BmsI GCATC 1 cut(s) 543
Bpu10I CCTNAGC 1 cut(s) 1038
BpuEI CTTGAG 1 cut(s) 558
BsaJI CCNNGG 2 cut(s) 462, 588
BsaWI WCCGGW 1 cut(s) 920
Bsc4I CCNNNNNNNGG 1 cut(s) 1112
Bse1I ACTGG 1 cut(s) 128
Bse3DI GCAATG 2 cut(s) 703, 777
BseBI CCWGG 1 cut(s) 158
BseDI CCNNGG 2 cut(s) 462, 588
BseGI GGATG 2 cut(s) 647, 947
BseLI CCNNNNNNNGG 1 cut(s) 1112
BseMI GCAATG 2 cut(s) 703, 777
BseMII CTCAG 3 cut(s) 400, 672, 873
BseNI ACTGG 1 cut(s) 128
BseRI GAGGAG 2 cut(s) 881, 884
BseSI GKGCMC 2 cut(s) 883, 1009
BseXI GCAGC 4 cut(s) 664, 686, 794, 838
BsgI GTGCAG 1 cut(s) 599
Bsh1236I CGCG 1 cut(s) 45
BshFI GGCC 4 cut(s) 147, 461, 587, 848
BshNI GGYRCC 1 cut(s) 1004
BsiHKAI GWGCWC 1 cut(s) 616
BsiSI CCGG 1 cut(s) 921
BslFI GGGAC 1 cut(s) 1106
BslI CCNNNNNNNGG 1 cut(s) 1112
BsmAI GTCTC 2 cut(s) 506, 862
BsmFI GGGAC 1 cut(s) 1106
BsnI GGCC 4 cut(s) 147, 461, 587, 848
Bsp1286I GDGCHC 4 cut(s) 395, 616, 883, 1009
Bsp143I GATC 6 cut(s) 109, 403, 442, 654, 756, 862
BspACI CCGC 1 cut(s) 849
BspANI GGCC 4 cut(s) 147, 461, 587, 848
BspCNI CTCAG 3 cut(s) 399, 671, 872
BspFNI CGCG 1 cut(s) 45
BspHI TCATGA 1 cut(s) 651
BspLI GGNNCC 5 cut(s) 333, 570, 709, 1006, 1104
BspMAI CTGCAG 1 cut(s) 421
BspPI GGATC 1 cut(s) 117
BspT107I GGYRCC 1 cut(s) 1004
BsrDI GCAATG 2 cut(s) 703, 777
BsrI ACTGG 1 cut(s) 128
BssECI CCNNGG 2 cut(s) 462, 588
BssMI GATC 6 cut(s) 109, 403, 442, 654, 756, 862
BssNAI GTATAC 1 cut(s) 33
Bst1107I GTATAC 1 cut(s) 33
Bst2UI CCWGG 1 cut(s) 158
Bst4CI ACNGT 1 cut(s) 517
Bst6I CTCTTC 4 cut(s) 88, 602, 879, 1059
BstC8I GCNNGC 2 cut(s) 599, 948
BstDEI CTNAG 5 cut(s) 386, 446, 658, 859, 1038
BstF5I GGATG 2 cut(s) 647, 947
BstFNI CGCG 1 cut(s) 45
BstH2I RGCGCY 1 cut(s) 1038
BstHHI GCGC 1 cut(s) 1037
BstKTI GATC 6 cut(s) 112, 406, 445, 657, 759, 865
BstMAI GTCTC 2 cut(s) 506, 862
BstMBI GATC 6 cut(s) 109, 403, 442, 654, 756, 862
BstMWI GCNNNNNNNGC 3 cut(s) 153, 458, 956
BstNI CCWGG 1 cut(s) 158
BstSCI CCNGG 1 cut(s) 156
BstSFI CTRYAG 1 cut(s) 417
BstSLI GKGCMC 2 cut(s) 883, 1009
BstUI CGCG 1 cut(s) 45
BstV1I GCAGC 4 cut(s) 664, 686, 794, 838
BstX2I RGATCY 2 cut(s) 403, 862
BstXI CCANNNNNNTGG 1 cut(s) 201
BstYI RGATCY 2 cut(s) 403, 862
BstZ17I GTATAC 1 cut(s) 33
BsuRI GGCC 4 cut(s) 147, 461, 587, 848
BtsCI GGATG 2 cut(s) 647, 947
Cac8I GCNNGC 2 cut(s) 599, 948
CciI TCATGA 1 cut(s) 651
CfoI GCGC 1 cut(s) 1037
CseI GACGC 1 cut(s) 29
Csp6I GTAC 2 cut(s) 363, 995
CviAII CATG 3 cut(s) 360, 623, 652
CviQI GTAC 2 cut(s) 363, 995
DdeI CTNAG 5 cut(s) 386, 446, 658, 859, 1038
DpnI GATC 6 cut(s) 111, 405, 444, 656, 758, 864
DpnII GATC 6 cut(s) 109, 403, 442, 654, 756, 862
DraI TTTAAA 1 cut(s) 427
DraIII CACNNNGTG 1 cut(s) 1004
EaeI YGGCCR 1 cut(s) 846
Eam1104I CTCTTC 4 cut(s) 88, 602, 879, 1059
EarI CTCTTC 4 cut(s) 88, 602, 879, 1059
Eco147I AGGCCT 1 cut(s) 587
Eco24I GRGCYC 1 cut(s) 395
Eco32I GATATC 1 cut(s) 19
EcoRI GAATTC 1 cut(s) 903
EcoRII CCWGG 1 cut(s) 156
EcoRV GATATC 1 cut(s) 19
EcoT38I GRGCYC 1 cut(s) 395
FaeI CATG 3 cut(s) 363, 626, 655
FaqI GGGAC 1 cut(s) 1106
FatI CATG 3 cut(s) 359, 622, 651
FblI GTMKAC 1 cut(s) 32
Fnu4HI GCNGC 5 cut(s) 675, 678, 783, 849, 852
FokI GGATG 2 cut(s) 654, 954
FriOI GRGCYC 1 cut(s) 395
Fsp4HI GCNGC 5 cut(s) 675, 678, 783, 849, 852
FspBI CTAG 2 cut(s) 237, 911
GlaI GCGC 1 cut(s) 1036
GluI GCNGC 5 cut(s) 675, 678, 783, 849, 852
HaeII RGCGCY 1 cut(s) 1038
HaeIII GGCC 4 cut(s) 147, 461, 587, 848
HapII CCGG 1 cut(s) 921
HgaI GACGC 1 cut(s) 29
HhaI GCGC 1 cut(s) 1037
Hin1II CATG 3 cut(s) 363, 626, 655
Hin6I GCGC 1 cut(s) 1035
HinP1I GCGC 1 cut(s) 1035
HindIII AAGCTT 3 cut(s) 244, 314, 948
HinfI GANTC 3 cut(s) 205, 293, 495
HpaII CCGG 1 cut(s) 921
HphI GGTGA 4 cut(s) 515, 760, 848, 877
Hpy166II GTNNAC 2 cut(s) 33, 726
Hpy188I TCNGA 3 cut(s) 61, 592, 862
Hpy188III TCNNGA 5 cut(s) 167, 344, 559, 639, 652
Hpy8I GTNNAC 2 cut(s) 33, 726
Hpy99I CGWCG 1 cut(s) 45
HpyAV CCTTC 6 cut(s) 83, 577, 772, 835, 1019, 1093
HpyCH4III ACNGT 1 cut(s) 517
HpyCH4V TGCA 9 cut(s) 141, 322, 419, 534, 580, 597, 674, 680, 782
HpyF10VI GCNNNNNNNGC 3 cut(s) 153, 458, 956
HpyF3I CTNAG 5 cut(s) 386, 446, 658, 859, 1038
Hsp92II CATG 3 cut(s) 363, 626, 655
HspAI GCGC 1 cut(s) 1035
Kzo9I GATC 6 cut(s) 109, 403, 442, 654, 756, 862
LmnI GCTCC 2 cut(s) 418, 707
LpnPI CCDG 8 cut(s) 141, 143, 170, 373, 429, 544, 624, 934
Lsp1109I GCAGC 4 cut(s) 664, 686, 794, 838
LweI GCATC 1 cut(s) 543
MaeI CTAG 2 cut(s) 237, 911
MaeIII GTNAC 2 cut(s) 479, 748
MalI GATC 6 cut(s) 111, 405, 444, 656, 758, 864
MboI GATC 6 cut(s) 109, 403, 442, 654, 756, 862
MboII GAAGA 5 cut(s) 105, 224, 619, 866, 1076
MflI RGATCY 2 cut(s) 403, 862
MhlI GDGCHC 4 cut(s) 395, 616, 883, 1009
MluCI AATT 9 cut(s) 48, 118, 183, 281, 324, 338, 562, 628, 903
MmeI TCCRAC 4 cut(s) 77, 112, 451, 970
MseI TTAA 5 cut(s) 66, 408, 426, 438, 668
MslI CAYNNNNRTG 2 cut(s) 303, 746
MspA1I CMGCKG 2 cut(s) 677, 851
MspI CCGG 1 cut(s) 921
MspR9I CCNGG 1 cut(s) 158
MvaI CCWGG 1 cut(s) 158
MvnI CGCG 1 cut(s) 45
MwoI GCNNNNNNNGC 3 cut(s) 153, 458, 956
NdeII GATC 6 cut(s) 109, 403, 442, 654, 756, 862
NlaIII CATG 3 cut(s) 363, 626, 655
NlaIV GGNNCC 5 cut(s) 333, 570, 709, 1006, 1104
NmeAIII GCCGAG 1 cut(s) 487
NmuCI GTSAC 1 cut(s) 748
PagI TCATGA 1 cut(s) 651
PceI AGGCCT 1 cut(s) 587
PfeI GAWTC 3 cut(s) 205, 293, 495
PkrI GCNGC 5 cut(s) 676, 679, 784, 850, 853
Psp6I CCWGG 1 cut(s) 156
PspGI CCWGG 1 cut(s) 156
PspN4I GGNNCC 5 cut(s) 333, 570, 709, 1006, 1104
PstI CTGCAG 1 cut(s) 421
PsuI RGATCY 2 cut(s) 403, 862
PvuII CAGCTG 1 cut(s) 677
RsaI GTAC 2 cut(s) 364, 996
RsaNI GTAC 2 cut(s) 363, 995
RseI CAYNNNNRTG 2 cut(s) 303, 746
SaqAI TTAA 5 cut(s) 66, 408, 426, 438, 668
SatI GCNGC 5 cut(s) 675, 678, 783, 849, 852
Sau3AI GATC 6 cut(s) 109, 403, 442, 654, 756, 862
ScrFI CCNGG 1 cut(s) 158
SduI GDGCHC 4 cut(s) 395, 616, 883, 1009
SfaNI GCATC 1 cut(s) 543
SfcI CTRYAG 1 cut(s) 417
SmiMI CAYNNNNRTG 2 cut(s) 303, 746
SmlI CTYRAG 1 cut(s) 573
SmoI CTYRAG 1 cut(s) 573
Sse9I AATT 9 cut(s) 48, 118, 183, 281, 324, 338, 562, 628, 903
SseBI AGGCCT 1 cut(s) 587
SsiI CCGC 1 cut(s) 849
SspMI CTAG 2 cut(s) 237, 911
StuI AGGCCT 1 cut(s) 587
StyD4I CCNGG 1 cut(s) 156
TaaI ACNGT 1 cut(s) 517
TasI AATT 9 cut(s) 48, 118, 183, 281, 324, 338, 562, 628, 903
TauI GCSGC 1 cut(s) 851
TfiI GAWTC 3 cut(s) 205, 293, 495
Tru1I TTAA 5 cut(s) 66, 408, 426, 438, 668
Tru9I TTAA 5 cut(s) 66, 408, 426, 438, 668
TseFI GTSAC 1 cut(s) 748
TseI GCWGC 4 cut(s) 674, 677, 782, 851
Tsp45I GTSAC 1 cut(s) 748
TspDTI ATGAA 6 cut(s) 102, 294, 369, 639, 640, 754
TspGWI ACGGA 2 cut(s) 188, 763
XapI RAATTY 6 cut(s) 118, 183, 338, 562, 628, 903
XmiI GTMKAC 1 cut(s) 32
XspI CTAG 2 cut(s) 237, 911
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.