RchiOBHm_Chr6g0284591

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000068
Physical Location & Seq
Reverse (-)
47803649 .. 47804809
1161 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ25522

Sequence Viewer

Length: 1161 bp
ATGGAAGCCCTTCCTGAAGAGATCATACATGTAATCTTCCTGAGGTTACCCATCAAATCTTTACTCAAATGTACAGCAATATGCAAGACATGGAACTCTATAATCTCAACCTCTAGTTTCATCGACACCCACCTCCACCTCAACTGCAGAGATGGCCAACTCCTCTTGCTACAGGCTTTTTCATCACCTGCAGATAGGAGGGAGCCTTTCTCGTTGCATCGAGATAACCCTTCGTTCGATGAGTATACCAAGCCTAGAAATCCATTCTTAGCTTACGATAGGACACAAGCTGCTATCTCCAAAAAAAGATCAATAGCTTTAGGTAGTGAGCCTATCAATGTGGTCGGGACTTGTAACGGGCTGGTATGCCTTGTTGCTCATGACTTTACTGTGTTAATTTGGAACCCTAGTATTCGAAAGTTCGTGGTTTTGGCCAGGCCTAGTGTTACCTTCATCAGGGATCATAACCCTAGAATAAGTTATGCCTTCGGTTATGATTCGTCCACCAATGACTATAAGGTTCTGAGAACTGTGAGTTATGTTCAGGGAGCTCGTTCATGTGAAGTTGAGATTTGGTCATTGGCCCGTGGCTCTTGGAAGAGCCTAACTGCTTCCATTGCCATTCCTGGTGACGACCCCTGTTATCCAAAAGCTTTTCTTCATGACACTCATGCTTTTGTCAATGGTGCTCTGCATTGGTTTCATCAGTATAAGATGATAAACTACCACGATTCCATTGTTTCCTTTGATATTTCAAGTGAATCCTTTGGCGAAATGACAATGCCTGCATTCTGGGGAAATAGAGAGATTTGCTTAATTTCAAGATACAGGGACTCCCTTGCTTTCTTTGAACGAGAATTTACTGGTGTATTTCGTCTTAGCATGTGGGTCATGGAAGAGTACGGTGTGGCAAACTCCTGCACTAATATTTTCACTATGGACTTCCATCACATAACATATCCATATCCACGGCCGCTTTGGTTCAGAAACAGTAGTGGTGATGTAGTGCTCGAGGGCATTCAGGGAGTGCTGAAATCGGTGGATTCTAAGACCAAAAGCACTACTGATTTTCGAATCAATGGGTATGCGTCTTACGACTTTATGGATTATTTTGTAGAAAGCCTTGTATTACTAGACAAACCCAATGCTATTTCATACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

386

Amino Acids

44.16

Weight (kDa)

6.67

Isoelectric Point (pI)

38.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 2 - 38 1.8e-08 F-box-like
F-box PF00646 3 - 40 2.1e-08 F-box domain
FBA_3 PF08268 110 - 312 2.8e-23 F-box associated beta propeller domain
FBA_1 PF07734 111 - 317 4.9e-23 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 196
Acc36I ACCTGC 1 cut(s) 196
AccI GTMKAC 1 cut(s) 245
AciI CCGC 1 cut(s) 974
AclWI GGATC 1 cut(s) 468
AcoI YGGCCR 3 cut(s) 154, 432, 971
AcsI RAATTY 1 cut(s) 857
AcuI CTGAAG 1 cut(s) 36
AfaI GTAC 2 cut(s) 73, 902
AfiI CCNNNNNNNGG 1 cut(s) 456
AflIII ACRYGT 1 cut(s) 28
AgsI TTSAA 3 cut(s) 756, 822, 851
AjnI CCWGG 2 cut(s) 434, 625
AluBI AGCT 5 cut(s) 272, 290, 317, 551, 653
AluI AGCT 5 cut(s) 272, 290, 317, 551, 653
Alw21I GWGCWC 3 cut(s) 553, 691, 1011
AlwI GGATC 1 cut(s) 468
Ama87I CYCGRG 1 cut(s) 1010
AoxI GGCC 5 cut(s) 154, 432, 437, 582, 971
ApeKI GCWGC 1 cut(s) 290
ApoI RAATTY 1 cut(s) 857
Asp700I GAANNNNTTC 1 cut(s) 9
AspS9I GGNCC 1 cut(s) 583
AsuHPI GGTGA 3 cut(s) 177, 641, 1010
AsuII TTCGAA 2 cut(s) 415, 1072
AvaI CYCGRG 1 cut(s) 1010
AxyI CCTNAGG 1 cut(s) 41
BalI TGGCCA 2 cut(s) 156, 434
BanII GRGCYC 1 cut(s) 553
BarI GAAGNNNNNNTAC 2 cut(s) 9, 41
Bbv12I GWGCWC 3 cut(s) 553, 691, 1011
BbvI GCAGC 1 cut(s) 277
BccI CCATC 3 cut(s) 59, 146, 954
BceAI ACGGC 1 cut(s) 986
BciT130I CCWGG 2 cut(s) 436, 627
BfaI CTAG 6 cut(s) 114, 255, 408, 441, 471, 1133
BfmI CTRYAG 3 cut(s) 145, 170, 189
BfuAI ACCTGC 1 cut(s) 196
BisI GCNGC 2 cut(s) 291, 974
BlsI GCNGC 2 cut(s) 292, 975
Bme1390I CCNGG 2 cut(s) 436, 627
BmeT110I CYCGRG 1 cut(s) 1010
BmgT120I GGNCC 1 cut(s) 583
BmiI GGNNCC 2 cut(s) 204, 404
BmrFI CCNGG 2 cut(s) 436, 627
BmsI GCATC 1 cut(s) 226
BplI GAGNNNNNCTC 2 cut(s) 194, 226
Bpu14I TTCGAA 2 cut(s) 415, 1072
BsaJI CCNNGG 2 cut(s) 586, 968
BsaXI ACNNNNNCTCC 2 cut(s) 818, 848
Bsc4I CCNNNNNNNGG 1 cut(s) 456
Bse1I ACTGG 1 cut(s) 868
Bse21I CCTNAGG 1 cut(s) 41
Bse3DI GCAATG 1 cut(s) 615
BseBI CCWGG 2 cut(s) 436, 627
BseDI CCNNGG 2 cut(s) 586, 968
BseLI CCNNNNNNNGG 1 cut(s) 456
BseMI GCAATG 1 cut(s) 615
BseMII CTCAG 2 cut(s) 32, 515
BseNI ACTGG 1 cut(s) 868
BseRI GAGGAG 1 cut(s) 152
BseX3I CGGCCG 1 cut(s) 971
BseXI GCAGC 1 cut(s) 277
BsgI GTGCAG 1 cut(s) 904
Bsh1285I CGRYCG 1 cut(s) 974
BshFI GGCC 5 cut(s) 156, 434, 439, 584, 973
BsiEI CGRYCG 1 cut(s) 974
BsiHKAI GWGCWC 3 cut(s) 553, 691, 1011
BsiHKCI CYCGRG 1 cut(s) 1010
BslFI GGGAC 2 cut(s) 361, 845
BslI CCNNNNNNNGG 1 cut(s) 456
BsmFI GGGAC 2 cut(s) 361, 845
BsmI GAATGC 2 cut(s) 788, 1017
BsnI GGCC 5 cut(s) 156, 434, 439, 584, 973
BsoBI CYCGRG 1 cut(s) 1010
Bsp119I TTCGAA 2 cut(s) 415, 1072
Bsp1286I GDGCHC 3 cut(s) 553, 691, 1011
Bsp1407I TGTACA 1 cut(s) 71
Bsp143I GATC 3 cut(s) 21, 308, 460
BspACI CCGC 1 cut(s) 974
BspANI GGCC 5 cut(s) 156, 434, 439, 584, 973
BspCNI CTCAG 2 cut(s) 33, 516
BspHI TCATGA 2 cut(s) 379, 661
BspLI GGNNCC 2 cut(s) 204, 404
BspMAI CTGCAG 2 cut(s) 149, 193
BspMI ACCTGC 1 cut(s) 196
BspPI GGATC 1 cut(s) 468
BspQI GCTCTTC 1 cut(s) 593
BspT104I TTCGAA 2 cut(s) 415, 1072
BsrDI GCAATG 1 cut(s) 615
BsrGI TGTACA 1 cut(s) 71
BsrI ACTGG 1 cut(s) 868
BssECI CCNNGG 2 cut(s) 586, 968
BssMI GATC 3 cut(s) 21, 308, 460
BssNAI GTATAC 1 cut(s) 246
Bst1107I GTATAC 1 cut(s) 246
Bst2UI CCWGG 2 cut(s) 436, 627
Bst4CI ACNGT 4 cut(s) 391, 532, 905, 992
Bst6I CTCTTC 3 cut(s) 12, 593, 891
BstAUI TGTACA 1 cut(s) 71
BstBI TTCGAA 2 cut(s) 415, 1072
BstC8I GCNNGC 1 cut(s) 786
BstDEI CTNAG 5 cut(s) 41, 268, 524, 878, 1047
BstDSI CCRYGG 2 cut(s) 586, 968
BstEII GGTNACC 1 cut(s) 45
BstENI CCTNNNNNAGG 1 cut(s) 454
BstKTI GATC 3 cut(s) 24, 311, 463
BstMBI GATC 3 cut(s) 21, 308, 460
BstMCI CGRYCG 1 cut(s) 974
BstMWI GCNNNNNNNGC 2 cut(s) 153, 617
BstNI CCWGG 2 cut(s) 436, 627
BstNSI RCATGY 2 cut(s) 32, 886
BstPI GGTNACC 1 cut(s) 45
BstSCI CCNGG 2 cut(s) 434, 625
BstSFI CTRYAG 3 cut(s) 145, 170, 189
BstV1I GCAGC 1 cut(s) 277
BstZ17I GTATAC 1 cut(s) 246
BstZI CGGCCG 1 cut(s) 971
Bsu36I CCTNAGG 1 cut(s) 41
BsuRI GGCC 5 cut(s) 156, 434, 439, 584, 973
BtgI CCRYGG 2 cut(s) 586, 968
BveI ACCTGC 1 cut(s) 196
Cac8I GCNNGC 1 cut(s) 786
CciI TCATGA 2 cut(s) 379, 661
Cfr13I GGNCC 1 cut(s) 583
CseI GACGC 1 cut(s) 1077
Csp6I GTAC 2 cut(s) 72, 901
CviAII CATG 8 cut(s) 29, 90, 380, 558, 662, 671, 883, 892
CviQI GTAC 2 cut(s) 72, 901
DdeI CTNAG 5 cut(s) 41, 268, 524, 878, 1047
DpnI GATC 3 cut(s) 23, 310, 462
DpnII GATC 3 cut(s) 21, 308, 460
EaeI YGGCCR 3 cut(s) 154, 432, 971
EagI CGGCCG 1 cut(s) 971
Eam1104I CTCTTC 3 cut(s) 12, 593, 891
EarI CTCTTC 3 cut(s) 12, 593, 891
Ecl136II GAGCTC 1 cut(s) 551
EclXI CGGCCG 1 cut(s) 971
Eco147I AGGCCT 1 cut(s) 439
Eco24I GRGCYC 1 cut(s) 553
Eco52I CGGCCG 1 cut(s) 971
Eco53kI GAGCTC 1 cut(s) 551
Eco57I CTGAAG 1 cut(s) 36
Eco81I CCTNAGG 1 cut(s) 41
Eco88I CYCGRG 1 cut(s) 1010
Eco91I GGTNACC 1 cut(s) 45
EcoICRI GAGCTC 1 cut(s) 551
EcoNI CCTNNNNNAGG 1 cut(s) 454
EcoO65I GGTNACC 1 cut(s) 45
EcoRII CCWGG 2 cut(s) 434, 625
EcoT38I GRGCYC 1 cut(s) 553
FaeI CATG 8 cut(s) 32, 93, 383, 561, 665, 674, 886, 895
FalI AAGNNNNNCTT 2 cut(s) 642, 674
FaqI GGGAC 2 cut(s) 361, 845
FatI CATG 8 cut(s) 28, 89, 379, 557, 661, 670, 882, 891
FblI GTMKAC 1 cut(s) 245
Fnu4HI GCNGC 2 cut(s) 291, 974
FriOI GRGCYC 1 cut(s) 553
Fsp4HI GCNGC 2 cut(s) 291, 974
FspBI CTAG 6 cut(s) 114, 255, 408, 441, 471, 1133
GluI GCNGC 2 cut(s) 291, 974
HaeIII GGCC 5 cut(s) 156, 434, 439, 584, 973
HgaI GACGC 1 cut(s) 1077
Hin1II CATG 8 cut(s) 32, 93, 383, 561, 665, 674, 886, 895
HindIII AAGCTT 1 cut(s) 651
HinfI GANTC 6 cut(s) 497, 731, 761, 833, 1043, 1074
HphI GGTGA 3 cut(s) 177, 641, 1010
Hpy166II GTNNAC 2 cut(s) 246, 504
Hpy188I TCNGA 2 cut(s) 525, 986
Hpy188III TCNNGA 7 cut(s) 14, 40, 221, 346, 380, 662, 822
Hpy8I GTNNAC 2 cut(s) 246, 504
HpyAV CCTTC 4 cut(s) 20, 240, 460, 496
HpyCH4III ACNGT 4 cut(s) 391, 532, 905, 992
HpyCH4V TGCA 7 cut(s) 84, 147, 191, 217, 694, 788, 921
HpyF10VI GCNNNNNNNGC 2 cut(s) 153, 617
HpyF3I CTNAG 5 cut(s) 41, 268, 524, 878, 1047
Hsp92II CATG 8 cut(s) 32, 93, 383, 561, 665, 674, 886, 895
Kzo9I GATC 3 cut(s) 21, 308, 460
LguI GCTCTTC 1 cut(s) 593
LmnI GCTCC 2 cut(s) 202, 548
Lsp1109I GCAGC 1 cut(s) 277
LweI GCATC 1 cut(s) 226
MaeI CTAG 6 cut(s) 114, 255, 408, 441, 471, 1133
MaeIII GTNAC 4 cut(s) 45, 353, 445, 629
MalI GATC 3 cut(s) 23, 310, 462
MboI GATC 3 cut(s) 21, 308, 460
MboII GAAGA 5 cut(s) 28, 29, 610, 650, 908
MhlI GDGCHC 3 cut(s) 553, 691, 1011
MlsI TGGCCA 2 cut(s) 156, 434
MluCI AATT 3 cut(s) 396, 816, 857
MluNI TGGCCA 2 cut(s) 156, 434
MlyI GAGTC 1 cut(s) 827
MnlI CCTC 7 cut(s) 36, 121, 143, 149, 173, 192, 1006
Mox20I TGGCCA 2 cut(s) 156, 434
MroXI GAANNNNTTC 1 cut(s) 9
MscI TGGCCA 2 cut(s) 156, 434
MseI TTAA 2 cut(s) 395, 815
Msp20I TGGCCA 2 cut(s) 156, 434
MspR9I CCNGG 2 cut(s) 436, 627
Mva1269I GAATGC 2 cut(s) 788, 1017
MvaI CCWGG 2 cut(s) 436, 627
MwoI GCNNNNNNNGC 2 cut(s) 153, 617
NdeII GATC 3 cut(s) 21, 308, 460
NlaIII CATG 8 cut(s) 32, 93, 383, 561, 665, 674, 886, 895
NlaIV GGNNCC 2 cut(s) 204, 404
NmuCI GTSAC 1 cut(s) 629
NspI RCATGY 2 cut(s) 32, 886
NspV TTCGAA 2 cut(s) 415, 1072
PaeR7I CTCGAG 1 cut(s) 1010
PagI TCATGA 2 cut(s) 379, 661
PaqCI CACCTGC 1 cut(s) 196
PceI AGGCCT 1 cut(s) 439
PciI ACATGT 1 cut(s) 28
PciSI GCTCTTC 1 cut(s) 593
PctI GAATGC 2 cut(s) 788, 1017
PdmI GAANNNNTTC 1 cut(s) 9
PfeI GAWTC 5 cut(s) 497, 731, 761, 1043, 1074
PkrI GCNGC 2 cut(s) 292, 975
PleI GAGTC 1 cut(s) 827
PpsI GAGTC 1 cut(s) 827
PscI ACATGT 1 cut(s) 28
Psp124BI GAGCTC 1 cut(s) 553
Psp6I CCWGG 2 cut(s) 434, 625
PspEI GGTNACC 1 cut(s) 45
PspGI CCWGG 2 cut(s) 434, 625
PspN4I GGNNCC 2 cut(s) 204, 404
PspPI GGNCC 1 cut(s) 583
PspXI VCTCGAGB 1 cut(s) 1010
PstI CTGCAG 2 cut(s) 149, 193
RsaI GTAC 2 cut(s) 73, 902
RsaNI GTAC 2 cut(s) 72, 901
SacI GAGCTC 1 cut(s) 553
SapI GCTCTTC 1 cut(s) 593
SaqAI TTAA 2 cut(s) 395, 815
SatI GCNGC 2 cut(s) 291, 974
Sau3AI GATC 3 cut(s) 21, 308, 460
Sau96I GGNCC 1 cut(s) 583
SchI GAGTC 1 cut(s) 827
ScrFI CCNGG 2 cut(s) 436, 627
SduI GDGCHC 3 cut(s) 553, 691, 1011
SfaNI GCATC 1 cut(s) 226
SfcI CTRYAG 3 cut(s) 145, 170, 189
Sfr274I CTCGAG 1 cut(s) 1010
SfuI TTCGAA 2 cut(s) 415, 1072
SlaI CTCGAG 1 cut(s) 1010
SmlI CTYRAG 1 cut(s) 1010
SmoI CTYRAG 1 cut(s) 1010
Sse9I AATT 3 cut(s) 396, 816, 857
SseBI AGGCCT 1 cut(s) 439
SsiI CCGC 1 cut(s) 974
SspI AATATT 1 cut(s) 928
SspMI CTAG 6 cut(s) 114, 255, 408, 441, 471, 1133
SstI GAGCTC 1 cut(s) 553
StuI AGGCCT 1 cut(s) 439
StyD4I CCNGG 2 cut(s) 434, 625
TaaI ACNGT 4 cut(s) 391, 532, 905, 992
TaqI TCGA 6 cut(s) 123, 220, 237, 415, 1011, 1072
TasI AATT 3 cut(s) 396, 816, 857
TatI WGTACW 1 cut(s) 71
TauI GCSGC 1 cut(s) 976
TfiI GAWTC 5 cut(s) 497, 731, 761, 1043, 1074
Tru1I TTAA 2 cut(s) 395, 815
Tru9I TTAA 2 cut(s) 395, 815
TseFI GTSAC 1 cut(s) 629
TseI GCWGC 1 cut(s) 290
Tsp45I GTSAC 1 cut(s) 629
TspDTI ATGAA 7 cut(s) 109, 171, 442, 546, 650, 692, 1143
XagI CCTNNNNNAGG 1 cut(s) 454
XapI RAATTY 1 cut(s) 857
XceI RCATGY 2 cut(s) 32, 886
XcmI CCANNNNNNNNNTGG 1 cut(s) 975
XhoI CTCGAG 1 cut(s) 1010
XmiI GTMKAC 1 cut(s) 245
XmnI GAANNNNTTC 1 cut(s) 9
XspI CTAG 6 cut(s) 114, 255, 408, 441, 471, 1133
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.