FvH4_3g42380

F-box kelch-repeat protein At3g23880-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000068
Physical Location & Seq
Forward (+)
35382106 .. 35384895
2790 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g42380.t2

Sequence Viewer

Length: 1248 bp
ATGTCAGACTGTCTTCCTCAAGAAGTCATAACCAATATATTACTTAGACTGCCCGCTAAATCTTTGGTTGTATGCACTTCAGTCTGCAAGTCATGGAGGTCCATGATTAAAGACTCTAGCTTTATTAGCGCCCACCTCAGCCGCACAATCGACTTTAACGACCACCATGACACTCACCTCCTACTACTCCACAGGTTCTATACCATCTGGAGTGAAAAGGTTTCAGTTCACAGGCTAAAGCAGGAGGTTTACTCTTTGCACTATGATAACAATGATTTTTCTGATTGTTGTGAGATAGGCTTTCAATCTCCAATTGCTGATAGGGAAATCTGTAGTGACTTTTTCCGAGTGGTTGGTGTTTGTAACGGGCTGGTATGCCTCGCAGATGATTTTGAACGTTATGGCGAAAATTTCTTGTTATGGAATCCCTCTATAAGAAAGCTGGTAAGCCTTCCCAAGCCTGGCATTACTGTTCAGACTGTTGGTGGGTATGATGCACAACATGGTTTTGCATTTGATGTTGTTACCAATGACTATAAGGTTGTGAGGGTTGTCGAGGATCAATATGGATGGGAGGACGAAGAAACTGAGAATCGAATTTTTGTGGAGGTTTATTCACTAGCTGCTGGCTCATGGAGTTCTCGTAGGATTGTTGATCCCCAATGGTCAGTATTTGGACACTCACCCCAGGCTTTTGTCAATGGGGCTCTTCATTGGGATGTACGCTCTAAAGCAAGTAGCAAACATCGTTATTTTATTCTGGCATTTGATGTGAGCAGTGAGTTATTGCGGGAGATGATGATGCCAGAGAGTTTGGATTGGGATTCATTTAGGCCAGGGTTTGGAGACTTGTCATTGCAATTGACTGTTTCAGGAGATGGAAAGTCCCTTGCTCTGTTCTTGAGGTATCATGATGAGTATTCAGATCCCAGTTTACTGGATGTATGGGTAATGAAAGAGTATTGTGTAGAGGAGTCGTGGACCAAATTGATAACTCTCCGTCCACAAGGTCCACAAAGAAGTTTACCTAGAGCTGTATGTTTCAGGAAGAGAGGTGAAGTAGTGATGATAAGAAATCTTGAGAAACATTGTAATGGAGGGGAAGAAGCTAGAAATGAATTAGTTTCACTGGACCTTGAGAGCGGACAATTCAAGAGTCTCGGGATTTGTCGATATAAATATTACACCATTGATCCTTATGAAGAAAGCATTGTCTTAATTGACAGGAATGAAGCAATTTCTTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

416

Amino Acids

47.76

Weight (kDa)

5.36

Isoelectric Point (pI)

41.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 3 - 40 2.1e-09 F-box-like
F-box PF00646 4 - 41 2.8e-10 F-box domain
FBA_1 PF07734 81 - 340 1.1e-21 F-box associated beta propeller domain
FBA_3 PF08268 114 - 358 3.9e-17 F-box associated beta propeller domain
b-prop_At3g26010-like PF24750 117 - 260 1.9e-09 F-box protein At3g26010-like, beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 842
AccBSI CCGCTC 1 cut(s) 1143
AciI CCGC 4 cut(s) 54, 142, 790, 1143
AclI AACGTT 1 cut(s) 397
AclWI GGATC 4 cut(s) 567, 650, 920, 1187
AcsI RAATTY 2 cut(s) 409, 597
AcuI CTGAAG 1 cut(s) 63
AfaI GTAC 1 cut(s) 723
AfiI CCNNNNNNNGG 2 cut(s) 461, 842
AgsI TTSAA 3 cut(s) 305, 395, 1153
AjnI CCWGG 3 cut(s) 460, 687, 835
AluBI AGCT 5 cut(s) 120, 442, 623, 1034, 1109
AluI AGCT 5 cut(s) 120, 442, 623, 1034, 1109
Alw26I GTCTC 2 cut(s) 840, 1163
AlwI GGATC 4 cut(s) 567, 650, 920, 1187
Ama87I CYCGRG 1 cut(s) 1160
AoxI GGCC 1 cut(s) 833
ApeKI GCWGC 1 cut(s) 623
ApoI RAATTY 2 cut(s) 409, 597
AspLEI GCGC 1 cut(s) 131
AspS9I GGNCC 4 cut(s) 99, 981, 1010, 1132
AsuHPI GGTGA 3 cut(s) 167, 675, 1067
AvaI CYCGRG 1 cut(s) 1160
AvaII GGWCC 4 cut(s) 99, 981, 1010, 1132
BanII GRGCYC 1 cut(s) 709
BbsI GAAGAC 1 cut(s) 5
BbvCI CCTCAGC 1 cut(s) 137
BbvI GCAGC 1 cut(s) 610
BccI CCATC 3 cut(s) 212, 564, 872
BciT130I CCWGG 3 cut(s) 462, 689, 837
BcoDI GTCTC 2 cut(s) 840, 1163
BfaI CTAG 4 cut(s) 117, 620, 1029, 1110
BfmI CTRYAG 1 cut(s) 331
BfoI RGCGCY 1 cut(s) 132
BisI GCNGC 2 cut(s) 142, 624
BlsI GCNGC 2 cut(s) 143, 625
Bme1390I CCNGG 3 cut(s) 462, 689, 837
Bme18I GGWCC 4 cut(s) 99, 981, 1010, 1132
BmeT110I CYCGRG 1 cut(s) 1160
BmgT120I GGNCC 4 cut(s) 99, 981, 1010, 1132
BmrFI CCNGG 3 cut(s) 462, 689, 837
BmrI ACTGGG 1 cut(s) 924
BmsI GCATC 2 cut(s) 484, 792
BmuI ACTGGG 1 cut(s) 924
BpiI GAAGAC 1 cut(s) 5
BplI GAGNNNNNCTC 2 cut(s) 236, 268
BpmI CTGGAG 1 cut(s) 229
Bpu10I CCTNAGC 1 cut(s) 137
BpuEI CTTGAG 3 cut(s) 922, 1100, 1157
BsaJI CCNNGG 2 cut(s) 687, 836
BsaXI ACNNNNNCTCC 2 cut(s) 628, 658
Bsc4I CCNNNNNNNGG 2 cut(s) 461, 842
Bse1I ACTGG 3 cut(s) 930, 942, 1134
Bse3DI GCAATG 1 cut(s) 854
BseBI CCWGG 3 cut(s) 462, 689, 837
BseDI CCNNGG 2 cut(s) 687, 836
BseGI GGATG 3 cut(s) 575, 724, 946
BseLI CCNNNNNNNGG 2 cut(s) 461, 842
BseMI GCAATG 1 cut(s) 854
BseMII CTCAG 2 cut(s) 151, 579
BseNI ACTGG 3 cut(s) 930, 942, 1134
BseRI GAGGAG 1 cut(s) 986
BseXI GCAGC 1 cut(s) 610
BshFI GGCC 1 cut(s) 835
BsiHKCI CYCGRG 1 cut(s) 1160
BslFI GGGAC 1 cut(s) 871
BslI CCNNNNNNNGG 2 cut(s) 461, 842
BsmAI GTCTC 2 cut(s) 840, 1163
BsmFI GGGAC 1 cut(s) 871
BsnI GGCC 1 cut(s) 835
BsoBI CYCGRG 1 cut(s) 1160
Bsp1286I GDGCHC 1 cut(s) 709
Bsp143I GATC 4 cut(s) 559, 655, 925, 1192
BspACI CCGC 4 cut(s) 54, 142, 790, 1143
BspANI GGCC 1 cut(s) 835
BspCNI CTCAG 2 cut(s) 150, 580
BspHI TCATGA 1 cut(s) 910
BspPI GGATC 4 cut(s) 567, 650, 920, 1187
BspQI GCTCTTC 1 cut(s) 714
BsrBI CCGCTC 1 cut(s) 1143
BsrDI GCAATG 1 cut(s) 854
BsrI ACTGG 3 cut(s) 930, 942, 1134
BssECI CCNNGG 2 cut(s) 687, 836
BssMI GATC 4 cut(s) 559, 655, 925, 1192
Bst2UI CCWGG 3 cut(s) 462, 689, 837
Bst4CI ACNGT 4 cut(s) 11, 472, 481, 868
Bst6I CTCTTC 2 cut(s) 714, 1043
BstC8I GCNNGC 2 cut(s) 54, 628
BstDEI CTNAG 3 cut(s) 44, 137, 588
BstF5I GGATG 3 cut(s) 575, 724, 946
BstH2I RGCGCY 1 cut(s) 132
BstHHI GCGC 1 cut(s) 131
BstKTI GATC 4 cut(s) 562, 658, 928, 1195
BstMAI GTCTC 2 cut(s) 840, 1163
BstMBI GATC 4 cut(s) 559, 655, 925, 1192
BstMWI GCNNNNNNNGC 1 cut(s) 126
BstNI CCWGG 3 cut(s) 462, 689, 837
BstSCI CCNGG 3 cut(s) 460, 687, 835
BstSFI CTRYAG 1 cut(s) 331
BstV1I GCAGC 1 cut(s) 610
BstV2I GAAGAC 1 cut(s) 5
BstX2I RGATCY 1 cut(s) 925
BstXI CCANNNNNNTGG 1 cut(s) 937
BstYI RGATCY 1 cut(s) 925
BsuRI GGCC 1 cut(s) 835
BtsCI GGATG 3 cut(s) 575, 724, 946
BtsI GCAGTG 1 cut(s) 784
BtsIMutI CAGTG 2 cut(s) 784, 1127
Cac8I GCNNGC 2 cut(s) 54, 628
CciI TCATGA 1 cut(s) 910
CfoI GCGC 1 cut(s) 131
Cfr13I GGNCC 4 cut(s) 99, 981, 1010, 1132
Csp6I GTAC 1 cut(s) 722
CviAII CATG 6 cut(s) 93, 103, 167, 503, 633, 911
CviQI GTAC 1 cut(s) 722
DdeI CTNAG 3 cut(s) 44, 137, 588
DpnI GATC 4 cut(s) 561, 657, 927, 1194
DpnII GATC 4 cut(s) 559, 655, 925, 1192
Eam1104I CTCTTC 2 cut(s) 714, 1043
EarI CTCTTC 2 cut(s) 714, 1043
Eco24I GRGCYC 1 cut(s) 709
Eco47I GGWCC 4 cut(s) 99, 981, 1010, 1132
Eco57I CTGAAG 1 cut(s) 63
Eco88I CYCGRG 1 cut(s) 1160
EcoRII CCWGG 3 cut(s) 460, 687, 835
EcoT38I GRGCYC 1 cut(s) 709
FaeI CATG 6 cut(s) 96, 106, 170, 506, 636, 914
FaqI GGGAC 1 cut(s) 871
FatI CATG 6 cut(s) 92, 102, 166, 502, 632, 910
FauI CCCGC 2 cut(s) 61, 783
Fnu4HI GCNGC 2 cut(s) 142, 624
FokI GGATG 3 cut(s) 582, 731, 953
FriOI GRGCYC 1 cut(s) 709
Fsp4HI GCNGC 2 cut(s) 142, 624
FspBI CTAG 4 cut(s) 117, 620, 1029, 1110
GlaI GCGC 1 cut(s) 130
GluI GCNGC 2 cut(s) 142, 624
GsuI CTGGAG 1 cut(s) 229
HaeII RGCGCY 1 cut(s) 132
HaeIII GGCC 1 cut(s) 835
HhaI GCGC 1 cut(s) 131
Hin1II CATG 6 cut(s) 96, 106, 170, 506, 636, 914
Hin6I GCGC 1 cut(s) 129
HinP1I GCGC 1 cut(s) 129
HinfI GANTC 6 cut(s) 113, 424, 592, 824, 974, 1156
HphI GGTGA 3 cut(s) 167, 675, 1067
Hpy166II GTNNAC 7 cut(s) 229, 250, 935, 981, 1004, 1013, 1025
Hpy188I TCNGA 5 cut(s) 7, 283, 347, 477, 925
Hpy188III TCNNGA 9 cut(s) 20, 208, 873, 901, 911, 1045, 1079, 1153, 1162
Hpy8I GTNNAC 7 cut(s) 229, 250, 935, 981, 1004, 1013, 1025
HpyAV CCTTC 1 cut(s) 461
HpyCH4III ACNGT 4 cut(s) 11, 472, 481, 868
HpyCH4IV ACGT 1 cut(s) 397
HpyCH4V TGCA 6 cut(s) 75, 87, 259, 497, 512, 859
HpyF10VI GCNNNNNNNGC 1 cut(s) 126
HpyF3I CTNAG 3 cut(s) 44, 137, 588
HpySE526I ACGT 1 cut(s) 397
Hsp92II CATG 6 cut(s) 96, 106, 170, 506, 636, 914
HspAI GCGC 1 cut(s) 129
Kzo9I GATC 4 cut(s) 559, 655, 925, 1192
LguI GCTCTTC 1 cut(s) 714
Lsp1109I GCAGC 1 cut(s) 610
LweI GCATC 2 cut(s) 484, 792
MaeI CTAG 4 cut(s) 117, 620, 1029, 1110
MaeII ACGT 1 cut(s) 397
MaeIII GTNAC 3 cut(s) 335, 362, 523
MalI GATC 4 cut(s) 561, 657, 927, 1194
MbiI CCGCTC 1 cut(s) 1143
MboI GATC 4 cut(s) 559, 655, 925, 1192
MboII GAAGA 6 cut(s) 5, 593, 701, 1060, 1115, 1214
MfeI CAATTG 2 cut(s) 312, 860
MflI RGATCY 1 cut(s) 925
MhlI GDGCHC 1 cut(s) 709
MluCI AATT 9 cut(s) 312, 409, 597, 860, 986, 1118, 1148, 1218, 1236
MlyI GAGTC 3 cut(s) 107, 983, 1165
MseI TTAA 3 cut(s) 108, 156, 1217
MslI CAYNNNNRTG 2 cut(s) 717, 1092
MspR9I CCNGG 3 cut(s) 462, 689, 837
MunI CAATTG 2 cut(s) 312, 860
MvaI CCWGG 3 cut(s) 462, 689, 837
MwoI GCNNNNNNNGC 1 cut(s) 126
NdeII GATC 4 cut(s) 559, 655, 925, 1192
NlaIII CATG 6 cut(s) 96, 106, 170, 506, 636, 914
NmuCI GTSAC 1 cut(s) 335
PagI TCATGA 1 cut(s) 910
PciSI GCTCTTC 1 cut(s) 714
PcsI WCGNNNNNNNCGW 1 cut(s) 156
PfeI GAWTC 3 cut(s) 424, 592, 824
PflMI CCANNNNNTGG 1 cut(s) 842
PkrI GCNGC 2 cut(s) 143, 625
PleI GAGTC 3 cut(s) 107, 982, 1164
PpsI GAGTC 3 cut(s) 107, 982, 1164
Psp1406I AACGTT 1 cut(s) 397
Psp6I CCWGG 3 cut(s) 460, 687, 835
PspGI CCWGG 3 cut(s) 460, 687, 835
PspPI GGNCC 4 cut(s) 99, 981, 1010, 1132
PsuI RGATCY 1 cut(s) 925
RsaI GTAC 1 cut(s) 723
RsaNI GTAC 1 cut(s) 722
RseI CAYNNNNRTG 2 cut(s) 717, 1092
SapI GCTCTTC 1 cut(s) 714
SaqAI TTAA 3 cut(s) 108, 156, 1217
SatI GCNGC 2 cut(s) 142, 624
Sau3AI GATC 4 cut(s) 559, 655, 925, 1192
Sau96I GGNCC 4 cut(s) 99, 981, 1010, 1132
SchI GAGTC 3 cut(s) 107, 983, 1165
ScrFI CCNGG 3 cut(s) 462, 689, 837
SduI GDGCHC 1 cut(s) 709
SfaNI GCATC 2 cut(s) 484, 792
SfcI CTRYAG 1 cut(s) 331
SinI GGWCC 4 cut(s) 99, 981, 1010, 1132
SmiMI CAYNNNNRTG 2 cut(s) 717, 1092
SmlI CTYRAG 4 cut(s) 18, 901, 1079, 1136
SmoI CTYRAG 4 cut(s) 18, 901, 1079, 1136
Sse9I AATT 9 cut(s) 312, 409, 597, 860, 986, 1118, 1148, 1218, 1236
SsiI CCGC 4 cut(s) 54, 142, 790, 1143
SspI AATATT 1 cut(s) 1181
SspMI CTAG 4 cut(s) 117, 620, 1029, 1110
StyD4I CCNGG 3 cut(s) 460, 687, 835
TaaI ACNGT 4 cut(s) 11, 472, 481, 868
TaiI ACGT 1 cut(s) 400
TaqI TCGA 4 cut(s) 150, 555, 595, 1171
TasI AATT 9 cut(s) 312, 409, 597, 860, 986, 1118, 1148, 1218, 1236
TauI GCSGC 1 cut(s) 144
TfiI GAWTC 3 cut(s) 424, 592, 824
Tru1I TTAA 3 cut(s) 108, 156, 1217
Tru9I TTAA 3 cut(s) 108, 156, 1217
TscAI CASTG 2 cut(s) 784, 1134
TseFI GTSAC 1 cut(s) 335
TseI GCWGC 1 cut(s) 623
Tsp45I GTSAC 1 cut(s) 335
TspDTI ATGAA 6 cut(s) 701, 816, 968, 1131, 1215, 1245
TspGWI ACGGA 1 cut(s) 989
TspRI CASTG 2 cut(s) 784, 1134
Van91I CCANNNNNTGG 1 cut(s) 842
VpaK11BI GGWCC 4 cut(s) 99, 981, 1010, 1132
XapI RAATTY 2 cut(s) 409, 597
XspI CTAG 4 cut(s) 117, 620, 1029, 1110
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.