Rroxscaffold_2G00107370

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0002118
Physical Location & Seq
Forward (+)
31246550 .. 31254579
8030 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00107370.1

Sequence Viewer

Length: 1641 bp
ATGTGGGACCGATATGCTTCGGTTCCTAGCTTCGATGCCATCTTGATGCGGCGCGTCGGCTATGATCCGGGGAATGAAGAGGCCGTCCCGCGATACAAGGATCGGAAGCCGTCTTGTACAGGTCCACCTGCCCAATTTGGCTTCAACCTCGGCTGTTGCGGGGCCTCCGTTCGATTCTCTCCCTCATCCACCTCGGCCGCGGTGGCCGCCGAACTCGGGGTTGGAGAGTGTATCACTCGTCCAGCAACCCGTCTCCACCTCTCTCGCTCTCTCGGTCTCGCAGTTCCTCCTCCGGGCTTGAGGTATCTCACTATCTCCCTCTCCGTCTCCGTCTCCTACTCTTCTCCTCCTCCCGACTTCCTCGGCGAGTCGGCAACCGCTCCTCCCTCCTCCTCCGTCCTCTTCTTTTTCTCTTCGAAGTTCGGCCTTCTAGTTGAATTGTTGAAATGGGTTCCGGGTTCGATTTTGGATTTCCGGTTGAATCTCCTCCTCTCCGTCTCTCGAGCTCTAGCGGGTGATTGGAACACCGCATTGTATTCTAAGCGGATCAAAAGTGAAACGAAACTGAAAAGCATTGGAGTTTCAAGCTCTTTTAAGATATTTAATTTTTCCATGGATTCATTCCTTCAAGCAATGGGAGGGAACATAGGAAGTGCAGATAGAGATCGAGGATTTGAGAGGGAACTTGAAGCAATGGGAGATATAAAGCACCGGAACATCGTGACTCTTAATGCTCGAATACTTTCTGTTGTTTTATCGTCTAAGGTTGGTGTGCGAGGACATAATCGGGGTCTAGAGGATATTGCCATTCCAGCTAGCAATTTGGTCGATGATCCGCCTGTTGCTCCTACAGCAAGTTACACGTATTGCAAGTCTATTCAAGTTGCGCAAAACGTGAAGCTTCCCGGAGATGCCACTGGATGCAATTGCAAAGGAAGTTGTGTAGATTCCAAGACCTGCCAATGTGTCAAACTTAACGGCACGACTTTCCATATGTGCACCGTGATGGTGGCAGCCAAGGATGTAGTGTTTGAATGTGGGCCAAAATGTGATTGTGGACCTTCTTTGTCAACCGTACTTCTCGTACGGGGCTCAAGTACCGATTTGAGTTATTCTACTTCTCATTTTGTGGTTGCCGAGGGGGAGATTCCACTCGTGGTAGCTAAAGGAGAGGAGATAGCACGTTATAAAGGACTTGATCCGACAGAGCGTTTACTAATGTTAAAAGCACTCCAAGATGAAGCATTGGCTTATATTAATGATGCTCTGAAACAAGGAACTGAAATTTCTTCATTCCGCAAAGATAAGATAGGAGGAGACGAAAAGATGACTTCTTATTGGTATGATGGAAATACAATAATAGGTCATAAATTATACAAGGAAGTAACTGTCATTGAGTCGAAGACAAAAGTTAGGGGAAAAGGGTGTTTGAACCTACCAAATATCAGTTTTCGGTGGGAAACACTAGCAACCAATCTCGAGGAATTTCAGAAAGTTATGGATGAACTCTCATCAAGCAAAGTTGCAGGAGAACGTGATGCTGCTAAGACTATTGAAACCGATGCTATTCCCGCTCTTGAGAAACTTCGAAGTTACAAGACGGTCGCCGTGGATTCTCTGCTAAGCTCACTCAACAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
WHIM1

Protein Analysis

546

Amino Acids

59.15

Weight (kDa)

8.49

Isoelectric Point (pI)

39.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pre-SET PF05033 263 - 353 1.3e-11 Pre-SET motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1188
AarI CACCTGC 1 cut(s) 136
Acc16I TGCGCA 1 cut(s) 888
Acc36I ACCTGC 2 cut(s) 136, 965
AccBSI CCGCTC 2 cut(s) 380, 1574
AccII CGCG 3 cut(s) 54, 91, 200
AclWI GGATC 5 cut(s) 59, 108, 554, 827, 1193
AcoI YGGCCR 2 cut(s) 195, 204
AcsI RAATTY 2 cut(s) 1284, 1484
AfaI GTAC 4 cut(s) 118, 1077, 1086, 1099
AfiI CCNNNNNNNGG 2 cut(s) 216, 293
AflIII ACRYGT 1 cut(s) 861
AjuI GAANNNNNNNTTGG 2 cut(s) 204, 236
AluBI AGCT 7 cut(s) 30, 506, 588, 815, 901, 1163, 1626
AluI AGCT 7 cut(s) 30, 506, 588, 815, 901, 1163, 1626
Alw21I GWGCWC 2 cut(s) 508, 1001
Alw26I GTCTC 6 cut(s) 257, 281, 331, 337, 502, 1311
Alw44I GTGCAC 1 cut(s) 997
AlwI GGATC 5 cut(s) 59, 108, 554, 827, 1193
Ama87I CYCGRG 3 cut(s) 215, 501, 1478
AoxI GGCC 6 cut(s) 81, 162, 195, 204, 424, 1040
ApaLI GTGCAC 1 cut(s) 997
ApeKI GCWGC 2 cut(s) 1013, 1541
ApoI RAATTY 2 cut(s) 1284, 1484
AseI ATTAAT 1 cut(s) 1257
Asp700I GAANNNNTTC 1 cut(s) 742
AspLEI GCGC 2 cut(s) 54, 889
AspS9I GGNCC 5 cut(s) 7, 122, 162, 1040, 1058
AsuC2I CCSGG 4 cut(s) 69, 294, 456, 906
AsuHPI GGTGA 1 cut(s) 527
AsuII TTCGAA 2 cut(s) 416, 1588
AsuNHI GCTAGC 1 cut(s) 815
AvaI CYCGRG 3 cut(s) 215, 501, 1478
AvaII GGWCC 3 cut(s) 7, 122, 1058
BaeGI GKGCMC 1 cut(s) 1001
BanII GRGCYC 2 cut(s) 508, 1094
BauI CACGAG 1 cut(s) 1154
BbsI GAAGAC 1 cut(s) 1409
Bbv12I GWGCWC 2 cut(s) 508, 1001
BbvI GCAGC 2 cut(s) 1025, 1528
BccI CCATC 3 cut(s) 47, 1000, 1340
BceAI ACGGC 4 cut(s) 68, 94, 994, 1592
BcgI CGANNNNNNTGC 2 cut(s) 808, 842
BcnI CCSGG 4 cut(s) 69, 294, 456, 906
BcoDI GTCTC 6 cut(s) 257, 281, 331, 337, 502, 1311
BfaI CTAG 6 cut(s) 27, 431, 509, 794, 816, 1466
BfmI CTRYAG 1 cut(s) 849
BfuAI ACCTGC 2 cut(s) 136, 965
BglI GCCNNNNNGGC 1 cut(s) 203
BisI GCNGC 5 cut(s) 50, 198, 207, 1014, 1542
BlpI GCTNAGC 1 cut(s) 1622
BlsI GCNGC 5 cut(s) 51, 199, 208, 1015, 1543
Bme1390I CCNGG 4 cut(s) 69, 294, 456, 906
Bme18I GGWCC 3 cut(s) 7, 122, 1058
BmeT110I CYCGRG 3 cut(s) 215, 501, 1478
BmgT120I GGNCC 5 cut(s) 7, 122, 162, 1040, 1058
BmiI GGNNCC 4 cut(s) 8, 24, 163, 453
BmrFI CCNGG 4 cut(s) 69, 294, 456, 906
BmsI GCATC 7 cut(s) 25, 36, 901, 911, 1252, 1528, 1552
BmtI GCTAGC 1 cut(s) 819
BpiI GAAGAC 1 cut(s) 1409
Bpu1102I GCTNAGC 1 cut(s) 1622
Bpu14I TTCGAA 2 cut(s) 416, 1588
BpuEI CTTGAG 3 cut(s) 319, 1078, 1598
BpuMI CCSGG 4 cut(s) 69, 294, 456, 906
BsaAI YACGTR 1 cut(s) 864
BsaBI GATNNNNATC 1 cut(s) 663
BsaI GGTCTC 1 cut(s) 281
BsaJI CCNNGG 9 cut(s) 68, 148, 192, 198, 361, 612, 1017, 1137, 1608
BsaWI WCCGGW 2 cut(s) 474, 711
BsaXI ACNNNNNCTCC 2 cut(s) 367, 397
Bsc4I CCNNNNNNNGG 2 cut(s) 216, 293
Bse1I ACTGG 1 cut(s) 922
Bse3DI GCAATG 2 cut(s) 639, 699
Bse8I GATNNNNATC 1 cut(s) 663
BseDI CCNNGG 9 cut(s) 68, 148, 192, 198, 361, 612, 1017, 1137, 1608
BseGI GGATG 4 cut(s) 185, 926, 1027, 1507
BseJI GATNNNNATC 1 cut(s) 663
BseLI CCNNNNNNNGG 2 cut(s) 216, 293
BseMI GCAATG 2 cut(s) 639, 699
BseNI ACTGG 1 cut(s) 922
BseSI GKGCMC 1 cut(s) 1001
BseX3I CGGCCG 1 cut(s) 195
BseXI GCAGC 2 cut(s) 1025, 1528
BsgI GTGCAG 1 cut(s) 675
Bsh1236I CGCG 3 cut(s) 54, 91, 200
Bsh1285I CGRYCG 2 cut(s) 198, 1605
BshFI GGCC 6 cut(s) 83, 164, 197, 206, 426, 1042
BsiEI CGRYCG 2 cut(s) 198, 1605
BsiHKAI GWGCWC 2 cut(s) 508, 1001
BsiHKCI CYCGRG 3 cut(s) 215, 501, 1478
BsiSI CCGG 6 cut(s) 68, 293, 455, 475, 712, 906
BsiWI CGTACG 1 cut(s) 1084
BslFI GGGAC 2 cut(s) 20, 71
BslI CCNNNNNNNGG 2 cut(s) 216, 293
BsmAI GTCTC 6 cut(s) 257, 281, 331, 337, 502, 1311
BsmBI CGTCTC 5 cut(s) 257, 331, 337, 502, 1311
BsmFI GGGAC 2 cut(s) 20, 71
BsnI GGCC 6 cut(s) 83, 164, 197, 206, 426, 1042
Bso31I GGTCTC 1 cut(s) 281
BsoBI CYCGRG 3 cut(s) 215, 501, 1478
Bsp119I TTCGAA 2 cut(s) 416, 1588
Bsp1286I GDGCHC 3 cut(s) 508, 1001, 1094
Bsp1407I TGTACA 1 cut(s) 116
Bsp143I GATC 6 cut(s) 64, 100, 546, 664, 832, 1198
Bsp1720I GCTNAGC 1 cut(s) 1622
Bsp19I CCATGG 1 cut(s) 612
BspANI GGCC 6 cut(s) 83, 164, 197, 206, 426, 1042
BspFNI CGCG 3 cut(s) 54, 91, 200
BspLI GGNNCC 4 cut(s) 8, 24, 163, 453
BspMI ACCTGC 2 cut(s) 136, 965
BspOI GCTAGC 1 cut(s) 819
BspPI GGATC 5 cut(s) 59, 108, 554, 827, 1193
BspT104I TTCGAA 2 cut(s) 416, 1588
BspTNI GGTCTC 1 cut(s) 281
BsrBI CCGCTC 2 cut(s) 380, 1574
BsrDI GCAATG 2 cut(s) 639, 699
BsrGI TGTACA 1 cut(s) 116
BsrI ACTGG 1 cut(s) 922
BssECI CCNNGG 9 cut(s) 68, 148, 192, 198, 361, 612, 1017, 1137, 1608
BssMI GATC 6 cut(s) 64, 100, 546, 664, 832, 1198
BssSI CACGAG 1 cut(s) 1154
BssT1I CCWWGG 2 cut(s) 612, 1017
Bst2BI CACGAG 1 cut(s) 1154
Bst4CI ACNGT 4 cut(s) 1003, 1075, 1390, 1603
Bst6I CTCTTC 4 cut(s) 72, 346, 407, 418
BstAUI TGTACA 1 cut(s) 116
BstBAI YACGTR 1 cut(s) 864
BstBI TTCGAA 2 cut(s) 416, 1588
BstC8I GCNNGC 1 cut(s) 817
BstDEI CTNAG 4 cut(s) 540, 762, 1545, 1622
BstDSI CCRYGG 3 cut(s) 198, 612, 1608
BstF5I GGATG 4 cut(s) 185, 926, 1027, 1507
BstFNI CGCG 3 cut(s) 54, 91, 200
BstHHI GCGC 2 cut(s) 54, 889
BstKTI GATC 6 cut(s) 67, 103, 549, 667, 835, 1201
BstMAI GTCTC 6 cut(s) 257, 281, 331, 337, 502, 1311
BstMBI GATC 6 cut(s) 64, 100, 546, 664, 832, 1198
BstMCI CGRYCG 2 cut(s) 198, 1605
BstMWI GCNNNNNNNGC 5 cut(s) 203, 206, 812, 851, 1571
BstSCI CCNGG 4 cut(s) 67, 292, 454, 904
BstSFI CTRYAG 1 cut(s) 849
BstSLI GKGCMC 1 cut(s) 1001
BstUI CGCG 3 cut(s) 54, 91, 200
BstV1I GCAGC 2 cut(s) 1025, 1528
BstV2I GAAGAC 1 cut(s) 1409
BstZI CGGCCG 1 cut(s) 195
BsuRI GGCC 6 cut(s) 83, 164, 197, 206, 426, 1042
BtgI CCRYGG 3 cut(s) 198, 612, 1608
BtsCI GGATG 4 cut(s) 185, 926, 1027, 1507
BtsIMutI CAGTG 1 cut(s) 915
BveI ACCTGC 2 cut(s) 136, 965
Cac8I GCNNGC 1 cut(s) 817
CfoI GCGC 2 cut(s) 54, 889
Cfr13I GGNCC 5 cut(s) 7, 122, 162, 1040, 1058
Cfr42I CCGCGG 1 cut(s) 201
CseI GACGC 1 cut(s) 43
Csp6I GTAC 4 cut(s) 117, 1076, 1085, 1098
CviAII CATG 1 cut(s) 613
CviQI GTAC 4 cut(s) 117, 1076, 1085, 1098
DdeI CTNAG 4 cut(s) 540, 762, 1545, 1622
DpnI GATC 6 cut(s) 66, 102, 548, 666, 834, 1200
DpnII GATC 6 cut(s) 64, 100, 546, 664, 832, 1198
EaeI YGGCCR 2 cut(s) 195, 204
EagI CGGCCG 1 cut(s) 195
Eam1104I CTCTTC 4 cut(s) 72, 346, 407, 418
EarI CTCTTC 4 cut(s) 72, 346, 407, 418
EciI GGCGGA 1 cut(s) 825
Ecl136II GAGCTC 1 cut(s) 506
EclXI CGGCCG 1 cut(s) 195
Eco130I CCWWGG 2 cut(s) 612, 1017
Eco24I GRGCYC 2 cut(s) 508, 1094
Eco31I GGTCTC 1 cut(s) 281
Eco47I GGWCC 3 cut(s) 7, 122, 1058
Eco52I CGGCCG 1 cut(s) 195
Eco53kI GAGCTC 1 cut(s) 506
Eco88I CYCGRG 3 cut(s) 215, 501, 1478
EcoICRI GAGCTC 1 cut(s) 506
EcoO109I RGGNCCY 1 cut(s) 162
EcoT14I CCWWGG 2 cut(s) 612, 1017
EcoT38I GRGCYC 2 cut(s) 508, 1094
ErhI CCWWGG 2 cut(s) 612, 1017
Esp3I CGTCTC 5 cut(s) 257, 331, 337, 502, 1311
FaeI CATG 1 cut(s) 616
FaqI GGGAC 2 cut(s) 20, 71
FatI CATG 1 cut(s) 612
FauI CCCGC 4 cut(s) 96, 152, 505, 1579
FauNDI CATATG 1 cut(s) 993
Fnu4HI GCNGC 5 cut(s) 50, 198, 207, 1014, 1542
FokI GGATG 4 cut(s) 172, 933, 1034, 1514
FriOI GRGCYC 2 cut(s) 508, 1094
Fsp4HI GCNGC 5 cut(s) 50, 198, 207, 1014, 1542
FspBI CTAG 6 cut(s) 27, 431, 509, 794, 816, 1466
FspI TGCGCA 1 cut(s) 888
GlaI GCGC 2 cut(s) 53, 888
GluI GCNGC 5 cut(s) 50, 198, 207, 1014, 1542
HaeIII GGCC 6 cut(s) 83, 164, 197, 206, 426, 1042
HapII CCGG 6 cut(s) 68, 293, 455, 475, 712, 906
HgaI GACGC 1 cut(s) 43
HhaI GCGC 2 cut(s) 54, 889
Hin1II CATG 1 cut(s) 616
Hin6I GCGC 2 cut(s) 52, 887
HinP1I GCGC 2 cut(s) 52, 887
HincII GTYRAC 1 cut(s) 1071
HindII GTYRAC 1 cut(s) 1071
HindIII AAGCTT 1 cut(s) 899
HinfI GANTC 9 cut(s) 174, 368, 481, 617, 724, 947, 1147, 1397, 1613
HpaII CCGG 6 cut(s) 68, 293, 455, 475, 712, 906
HphI GGTGA 1 cut(s) 527
Hpy166II GTNNAC 5 cut(s) 125, 999, 1058, 1071, 1214
Hpy188I TCNGA 4 cut(s) 105, 1203, 1269, 1491
Hpy188III TCNNGA 7 cut(s) 43, 353, 501, 721, 794, 1478, 1577
Hpy8I GTNNAC 5 cut(s) 125, 999, 1058, 1071, 1214
Hpy99I CGWCG 1 cut(s) 59
HpyAV CCTTC 3 cut(s) 437, 635, 1071
HpyCH4III ACNGT 4 cut(s) 1003, 1075, 1390, 1603
HpyCH4IV ACGT 4 cut(s) 863, 894, 1183, 1534
HpyCH4V TGCA 6 cut(s) 656, 870, 924, 930, 999, 1526
HpyF10VI GCNNNNNNNGC 5 cut(s) 203, 206, 812, 851, 1571
HpyF3I CTNAG 4 cut(s) 540, 762, 1545, 1622
HpySE526I ACGT 4 cut(s) 863, 894, 1183, 1534
Hsp92II CATG 1 cut(s) 616
HspAI GCGC 2 cut(s) 52, 887
KspI CCGCGG 1 cut(s) 201
Kzo9I GATC 6 cut(s) 64, 100, 546, 664, 832, 1198
LmnI GCTCC 2 cut(s) 385, 850
Lsp1109I GCAGC 2 cut(s) 1025, 1528
LweI GCATC 7 cut(s) 25, 36, 901, 911, 1252, 1528, 1552
MaeI CTAG 6 cut(s) 27, 431, 509, 794, 816, 1466
MaeII ACGT 4 cut(s) 863, 894, 1183, 1534
MaeIII GTNAC 4 cut(s) 721, 857, 1384, 1592
MalI GATC 6 cut(s) 66, 102, 548, 666, 834, 1200
MbiI CCGCTC 2 cut(s) 380, 1574
MboI GATC 6 cut(s) 64, 100, 546, 664, 832, 1198
MboII GAAGA 6 cut(s) 89, 333, 394, 405, 1281, 1414
MfeI CAATTG 1 cut(s) 925
MhlI GDGCHC 3 cut(s) 508, 1001, 1094
MluCI AATT 8 cut(s) 134, 437, 604, 820, 925, 1284, 1370, 1484
MlyI GAGTC 3 cut(s) 377, 718, 1406
MmeI TCCRAC 2 cut(s) 202, 1226
MroXI GAANNNNTTC 1 cut(s) 742
MseI TTAA 6 cut(s) 594, 603, 729, 975, 1223, 1257
MslI CAYNNNNRTG 2 cut(s) 44, 1004
MspA1I CMGCKG 1 cut(s) 200
MspI CCGG 6 cut(s) 68, 293, 455, 475, 712, 906
MspR9I CCNGG 4 cut(s) 69, 294, 456, 906
MunI CAATTG 1 cut(s) 925
MvnI CGCG 3 cut(s) 54, 91, 200
MwoI GCNNNNNNNGC 5 cut(s) 203, 206, 812, 851, 1571
NciI CCSGG 4 cut(s) 69, 294, 456, 906
NcoI CCATGG 1 cut(s) 612
NdeI CATATG 1 cut(s) 993
NdeII GATC 6 cut(s) 64, 100, 546, 664, 832, 1198
NheI GCTAGC 1 cut(s) 815
NlaIII CATG 1 cut(s) 616
NlaIV GGNNCC 4 cut(s) 8, 24, 163, 453
NmeAIII GCCGAG 4 cut(s) 129, 173, 342, 1162
NmuCI GTSAC 1 cut(s) 721
NsbI TGCGCA 1 cut(s) 888
NspV TTCGAA 2 cut(s) 416, 1588
PaeR7I CTCGAG 2 cut(s) 501, 1478
PaqCI CACCTGC 1 cut(s) 136
PdmI GAANNNNTTC 1 cut(s) 742
PfeI GAWTC 6 cut(s) 174, 481, 617, 947, 1147, 1613
Pfl23II CGTACG 1 cut(s) 1084
PfoI TCCNGGA 1 cut(s) 904
PkrI GCNGC 5 cut(s) 51, 199, 208, 1015, 1543
PleI GAGTC 3 cut(s) 376, 718, 1405
PpsI GAGTC 3 cut(s) 376, 718, 1405
Ppu21I YACGTR 1 cut(s) 864
PshBI ATTAAT 1 cut(s) 1257
PsiI TTATAA 1 cut(s) 1188
Psp124BI GAGCTC 1 cut(s) 508
PspLI CGTACG 1 cut(s) 1084
PspN4I GGNNCC 4 cut(s) 8, 24, 163, 453
PspPI GGNCC 5 cut(s) 7, 122, 162, 1040, 1058
RsaI GTAC 4 cut(s) 118, 1077, 1086, 1099
RsaNI GTAC 4 cut(s) 117, 1076, 1085, 1098
RseI CAYNNNNRTG 2 cut(s) 44, 1004
SacI GAGCTC 1 cut(s) 508
SacII CCGCGG 1 cut(s) 201
SaqAI TTAA 6 cut(s) 594, 603, 729, 975, 1223, 1257
SatI GCNGC 5 cut(s) 50, 198, 207, 1014, 1542
Sau3AI GATC 6 cut(s) 64, 100, 546, 664, 832, 1198
Sau96I GGNCC 5 cut(s) 7, 122, 162, 1040, 1058
SchI GAGTC 3 cut(s) 377, 718, 1406
ScrFI CCNGG 4 cut(s) 69, 294, 456, 906
SduI GDGCHC 3 cut(s) 508, 1001, 1094
SfaNI GCATC 7 cut(s) 25, 36, 901, 911, 1252, 1528, 1552
SfcI CTRYAG 1 cut(s) 849
SfiI GGCCNNNNNGGCC 1 cut(s) 203
Sfr274I CTCGAG 2 cut(s) 501, 1478
Sfr303I CCGCGG 1 cut(s) 201
SfuI TTCGAA 2 cut(s) 416, 1588
SgrBI CCGCGG 1 cut(s) 201
SinI GGWCC 3 cut(s) 7, 122, 1058
SlaI CTCGAG 2 cut(s) 501, 1478
SmiMI CAYNNNNRTG 2 cut(s) 44, 1004
SmlI CTYRAG 5 cut(s) 298, 501, 1093, 1478, 1577
SmoI CTYRAG 5 cut(s) 298, 501, 1093, 1478, 1577
Sse9I AATT 8 cut(s) 134, 437, 604, 820, 925, 1284, 1370, 1484
SspMI CTAG 6 cut(s) 27, 431, 509, 794, 816, 1466
SstI GAGCTC 1 cut(s) 508
StyD4I CCNGG 4 cut(s) 67, 292, 454, 904
StyI CCWWGG 2 cut(s) 612, 1017
TaaI ACNGT 4 cut(s) 1003, 1075, 1390, 1603
TaiI ACGT 4 cut(s) 866, 897, 1186, 1537
TaqII GACCGA 2 cut(s) 24, 263
TasI AATT 8 cut(s) 134, 437, 604, 820, 925, 1284, 1370, 1484
TatI WGTACW 1 cut(s) 116
TauI GCSGC 3 cut(s) 52, 200, 209
TfiI GAWTC 6 cut(s) 174, 481, 617, 947, 1147, 1613
Tru1I TTAA 6 cut(s) 594, 603, 729, 975, 1223, 1257
Tru9I TTAA 6 cut(s) 594, 603, 729, 975, 1223, 1257
TscAI CASTG 1 cut(s) 922
TseFI GTSAC 1 cut(s) 721
TseI GCWGC 2 cut(s) 1013, 1541
Tsp45I GTSAC 1 cut(s) 721
TspDTI ATGAA 5 cut(s) 90, 609, 1254, 1281, 1518
TspGWI ACGGA 5 cut(s) 157, 313, 319, 385, 484
TspRI CASTG 1 cut(s) 922
VneI GTGCAC 1 cut(s) 997
VpaK11BI GGWCC 3 cut(s) 7, 122, 1058
VspI ATTAAT 1 cut(s) 1257
XapI RAATTY 2 cut(s) 1284, 1484
XbaI TCTAGA 1 cut(s) 793
XhoI CTCGAG 2 cut(s) 501, 1478
XmnI GAANNNNTTC 1 cut(s) 742
XspI CTAG 6 cut(s) 27, 431, 509, 794, 816, 1466
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.