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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G25580 |
| fragaria_vesca | FvH4_2g30480 FvH4_2g30480 FvH4_2g30480 |
| malus_domestica | MD08G1131900.v1.1 |
| prunus_persica | Prupe.1G464000_v2.0.a1 |
| pyrus_communis | pycom08g11050 pycom10g20470 |
| rosa_chinensis | RchiOBHm_Chr2g0098451 RchiOBHm_Chr3g0485791 RchiOBHm_Chr6g0279171 RchiOBHm_Chr6g0312561 |
| rosa_laevigata | RLG00000010046 RLG00000010316 RLG00000022980 RLG00000034454 |
| rosa_multiflora | Rmu_sc0003094.1_g000011 Rmu_sc0008363.1_g000006 |
| rosa_roxburghii | Rroxscaffold_1G00034380 Rroxscaffold_2G00107370 Rroxscaffold_3G00241050 Rroxscaffold_3G00241960 Rroxscaffold_6G00414860 Rroxscaffold_7G00156690 Rroxscaffold_7G00189060 |
| rosa_rugosa | Rorug01G0191100 Rorug04G0105900 Rorug06G0123300 Rorug06G0197300 Rorug06G0215800 Rorug06G0396500 |
| rosa_samantha | Rh1BG106100 Rh1DG070000 Rh2CG403200 Rh3CG093200 Rh4BG061300 Rh5CG484500 Rh6AG514100 Rh6CG530800 Rh6DG516400 Rh7DG190800 |
| rosa_wichuraiana | Rw1G001170 Rw2G026220 Rw6G044670 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 467, 613 |
| Acc36I | ACCTGC | 2 cut(s) | 467, 613 |
| AccB1I | GGYRCC | 6 cut(s) | 236, 323, 455, 530, 565, 806 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 159 |
| AccBSI | CCGCTC | 1 cut(s) | 223 |
| AccI | GTMKAC | 2 cut(s) | 336, 447 |
| AccII | CGCG | 1 cut(s) | 749 |
| AclI | AACGTT | 1 cut(s) | 686 |
| AclWI | GGATC | 2 cut(s) | 502, 631 |
| AcoI | YGGCCR | 2 cut(s) | 555, 813 |
| AcuI | CTGAAG | 1 cut(s) | 653 |
| AcyI | GRCGYC | 7 cut(s) | 237, 324, 354, 384, 531, 807, 842 |
| AfaI | GTAC | 1 cut(s) | 737 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 47, 159, 184, 379, 527, 612 |
| AgsI | TTSAA | 1 cut(s) | 1057 |
| AjnI | CCWGG | 3 cut(s) | 46, 387, 617 |
| AluBI | AGCT | 4 cut(s) | 310, 577, 720, 821 |
| AluI | AGCT | 4 cut(s) | 310, 577, 720, 821 |
| Alw21I | GWGCWC | 1 cut(s) | 579 |
| Alw26I | GTCTC | 3 cut(s) | 553, 917, 1028 |
| AlwI | GGATC | 2 cut(s) | 502, 631 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 940 |
| ApaI | GGGCCC | 1 cut(s) | 229 |
| ApeKI | GCWGC | 2 cut(s) | 586, 896 |
| AspLEI | GCGC | 4 cut(s) | 239, 326, 533, 809 |
| AspS9I | GGNCC | 9 cut(s) | 162, 225, 226, 603, 615, 661, 751, 772, 980 |
| AsuC2I | CCSGG | 2 cut(s) | 601, 709 |
| AsuHPI | GGTGA | 4 cut(s) | 85, 259, 940, 1106 |
| AvaII | GGWCC | 2 cut(s) | 615, 751 |
| BaeGI | GKGCMC | 2 cut(s) | 229, 570 |
| BanI | GGYRCC | 6 cut(s) | 236, 323, 455, 530, 565, 806 |
| BanII | GRGCYC | 3 cut(s) | 229, 579, 786 |
| BbsI | GAAGAC | 2 cut(s) | 208, 866 |
| Bbv12I | GWGCWC | 1 cut(s) | 579 |
| BbvI | GCAGC | 2 cut(s) | 598, 883 |
| BccI | CCATC | 2 cut(s) | 305, 460 |
| BceAI | ACGGC | 6 cut(s) | 341, 398, 428, 667, 829, 1053 |
| BciT130I | CCWGG | 3 cut(s) | 48, 389, 619 |
| BcnI | CCSGG | 2 cut(s) | 601, 709 |
| BcoDI | GTCTC | 3 cut(s) | 553, 917, 1028 |
| BfaI | CTAG | 2 cut(s) | 26, 1041 |
| BfoI | RGCGCY | 4 cut(s) | 240, 327, 534, 810 |
| BfuAI | ACCTGC | 2 cut(s) | 467, 613 |
| BisI | GCNGC | 6 cut(s) | 244, 403, 587, 747, 805, 897 |
| BlsI | GCNGC | 6 cut(s) | 245, 404, 588, 748, 806, 898 |
| Bme1390I | CCNGG | 5 cut(s) | 48, 389, 601, 619, 709 |
| Bme18I | GGWCC | 2 cut(s) | 615, 751 |
| BmgT120I | GGNCC | 9 cut(s) | 162, 225, 226, 603, 615, 661, 751, 772, 980 |
| BmrFI | CCNGG | 5 cut(s) | 48, 389, 601, 619, 709 |
| BmsI | GCATC | 4 cut(s) | 261, 414, 582, 1087 |
| BpiI | GAAGAC | 2 cut(s) | 208, 866 |
| BpmI | CTGGAG | 1 cut(s) | 296 |
| Bpu10I | CCTNAGC | 1 cut(s) | 755 |
| BpuEI | CTTGAG | 2 cut(s) | 347, 736 |
| BpuMI | CCSGG | 2 cut(s) | 601, 709 |
| BsaBI | GATNNNNATC | 1 cut(s) | 512 |
| BsaHI | GRCGYC | 7 cut(s) | 237, 324, 354, 384, 531, 807, 842 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 89, 119 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 47, 159, 184, 379, 527, 612 |
| Bse118I | RCCGGY | 3 cut(s) | 239, 527, 612 |
| Bse8I | GATNNNNATC | 1 cut(s) | 512 |
| BseBI | CCWGG | 3 cut(s) | 48, 389, 619 |
| BseGI | GGATG | 3 cut(s) | 123, 513, 597 |
| BseJI | GATNNNNATC | 1 cut(s) | 512 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 47, 159, 184, 379, 527, 612 |
| BseMII | CTCAG | 3 cut(s) | 706, 746, 890 |
| BseRI | GAGGAG | 1 cut(s) | 427 |
| BseSI | GKGCMC | 2 cut(s) | 229, 570 |
| BseXI | GCAGC | 2 cut(s) | 598, 883 |
| BsgI | GTGCAG | 1 cut(s) | 926 |
| Bsh1236I | CGCG | 1 cut(s) | 749 |
| BshNI | GGYRCC | 6 cut(s) | 236, 323, 455, 530, 565, 806 |
| BsiHKAI | GWGCWC | 1 cut(s) | 579 |
| BsiSI | CCGG | 8 cut(s) | 240, 258, 528, 600, 613, 708, 816, 1103 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 47, 159, 184, 379, 527, 612 |
| BsmAI | GTCTC | 3 cut(s) | 553, 917, 1028 |
| BsmBI | CGTCTC | 3 cut(s) | 553, 917, 1028 |
| Bsp120I | GGGCCC | 1 cut(s) | 225 |
| Bsp1286I | GDGCHC | 4 cut(s) | 229, 570, 579, 786 |
| Bsp143I | GATC | 2 cut(s) | 507, 636 |
| Bsp19I | CCATGG | 1 cut(s) | 534 |
| BspCNI | CTCAG | 3 cut(s) | 705, 747, 889 |
| BspFNI | CGCG | 1 cut(s) | 749 |
| BspMI | ACCTGC | 2 cut(s) | 467, 613 |
| BspPI | GGATC | 2 cut(s) | 502, 631 |
| BspT107I | GGYRCC | 6 cut(s) | 236, 323, 455, 530, 565, 806 |
| BsrBI | CCGCTC | 1 cut(s) | 223 |
| BsrFI | RCCGGY | 3 cut(s) | 239, 527, 612 |
| BssAI | RCCGGY | 3 cut(s) | 239, 527, 612 |
| BssMI | GATC | 2 cut(s) | 507, 636 |
| BssNI | GRCGYC | 7 cut(s) | 237, 324, 354, 384, 531, 807, 842 |
| BssT1I | CCWWGG | 5 cut(s) | 183, 378, 534, 570, 810 |
| Bst2UI | CCWGG | 3 cut(s) | 48, 389, 619 |
| Bst4CI | ACNGT | 1 cut(s) | 928 |
| Bst6I | CTCTTC | 3 cut(s) | 95, 556, 730 |
| BstACI | GRCGYC | 7 cut(s) | 237, 324, 354, 384, 531, 807, 842 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 592, 628 |
| BstDEI | CTNAG | 3 cut(s) | 692, 755, 876 |
| BstDSI | CCRYGG | 2 cut(s) | 534, 747 |
| BstF5I | GGATG | 3 cut(s) | 123, 513, 597 |
| BstFNI | CGCG | 1 cut(s) | 749 |
| BstH2I | RGCGCY | 4 cut(s) | 240, 327, 534, 810 |
| BstHHI | GCGC | 4 cut(s) | 239, 326, 533, 809 |
| BstKTI | GATC | 2 cut(s) | 510, 639 |
| BstMAI | GTCTC | 3 cut(s) | 553, 917, 1028 |
| BstMBI | GATC | 2 cut(s) | 507, 636 |
| BstNI | CCWGG | 3 cut(s) | 48, 389, 619 |
| BstSCI | CCNGG | 5 cut(s) | 46, 387, 599, 617, 707 |
| BstSLI | GKGCMC | 2 cut(s) | 229, 570 |
| BstUI | CGCG | 1 cut(s) | 749 |
| BstV1I | GCAGC | 2 cut(s) | 598, 883 |
| BstV2I | GAAGAC | 2 cut(s) | 208, 866 |
| BstX2I | RGATCY | 1 cut(s) | 636 |
| BstYI | RGATCY | 1 cut(s) | 636 |
| BtgI | CCRYGG | 2 cut(s) | 534, 747 |
| BtgZI | GCGATG | 1 cut(s) | 238 |
| BtsCI | GGATG | 3 cut(s) | 123, 513, 597 |
| BveI | ACCTGC | 2 cut(s) | 467, 613 |
| CaiI | CAGNNNCTG | 1 cut(s) | 940 |
| CfoI | GCGC | 4 cut(s) | 239, 326, 533, 809 |
| Cfr10I | RCCGGY | 3 cut(s) | 239, 527, 612 |
| Cfr13I | GGNCC | 9 cut(s) | 162, 225, 226, 603, 615, 661, 751, 772, 980 |
| Cfr42I | CCGCGG | 1 cut(s) | 750 |
| CseI | GACGC | 3 cut(s) | 362, 373, 850 |
| Csp6I | GTAC | 1 cut(s) | 736 |
| CviAII | CATG | 1 cut(s) | 535 |
| CviQI | GTAC | 1 cut(s) | 736 |
| DdeI | CTNAG | 3 cut(s) | 692, 755, 876 |
| DinI | GGCGCC | 4 cut(s) | 238, 325, 532, 808 |
| DpnI | GATC | 2 cut(s) | 509, 638 |
| DpnII | GATC | 2 cut(s) | 507, 636 |
| EaeI | YGGCCR | 2 cut(s) | 555, 813 |
| Eam1104I | CTCTTC | 3 cut(s) | 95, 556, 730 |
| EarI | CTCTTC | 3 cut(s) | 95, 556, 730 |
| EciI | GGCGGA | 4 cut(s) | 7, 261, 400, 430 |
| Ecl136II | GAGCTC | 1 cut(s) | 577 |
| Eco130I | CCWWGG | 5 cut(s) | 183, 378, 534, 570, 810 |
| Eco147I | AGGCCT | 1 cut(s) | 30 |
| Eco24I | GRGCYC | 3 cut(s) | 229, 579, 786 |
| Eco47I | GGWCC | 2 cut(s) | 615, 751 |
| Eco53kI | GAGCTC | 1 cut(s) | 577 |
| Eco57I | CTGAAG | 1 cut(s) | 653 |
| EcoICRI | GAGCTC | 1 cut(s) | 577 |
| EcoO109I | RGGNCCY | 1 cut(s) | 226 |
| EcoRII | CCWGG | 3 cut(s) | 46, 387, 617 |
| EcoT14I | CCWWGG | 5 cut(s) | 183, 378, 534, 570, 810 |
| EcoT38I | GRGCYC | 3 cut(s) | 229, 579, 786 |
| EgeI | GGCGCC | 4 cut(s) | 238, 325, 532, 808 |
| EheI | GGCGCC | 4 cut(s) | 238, 325, 532, 808 |
| ErhI | CCWWGG | 5 cut(s) | 183, 378, 534, 570, 810 |
| Esp3I | CGTCTC | 3 cut(s) | 553, 917, 1028 |
| FaeI | CATG | 1 cut(s) | 538 |
| FaiI | YATR | 5 cut(s) | 197, 536, 560, 996, 1065 |
| FatI | CATG | 1 cut(s) | 534 |
| FauI | CCCGC | 4 cut(s) | 182, 186, 216, 712 |
| FblI | GTMKAC | 2 cut(s) | 336, 447 |
| Fnu4HI | GCNGC | 6 cut(s) | 244, 403, 587, 747, 805, 897 |
| FokI | GGATG | 3 cut(s) | 110, 500, 604 |
| FriOI | GRGCYC | 3 cut(s) | 229, 579, 786 |
| Fsp4HI | GCNGC | 6 cut(s) | 244, 403, 587, 747, 805, 897 |
| FspBI | CTAG | 2 cut(s) | 26, 1041 |
| GlaI | GCGC | 4 cut(s) | 238, 325, 532, 808 |
| GluI | GCNGC | 6 cut(s) | 244, 403, 587, 747, 805, 897 |
| GsuI | CTGGAG | 1 cut(s) | 296 |
| HaeII | RGCGCY | 4 cut(s) | 240, 327, 534, 810 |
| HapII | CCGG | 8 cut(s) | 240, 258, 528, 600, 613, 708, 816, 1103 |
| HgaI | GACGC | 3 cut(s) | 362, 373, 850 |
| HhaI | GCGC | 4 cut(s) | 239, 326, 533, 809 |
| Hin1I | GRCGYC | 7 cut(s) | 237, 324, 354, 384, 531, 807, 842 |
| Hin1II | CATG | 1 cut(s) | 538 |
| Hin6I | GCGC | 4 cut(s) | 237, 324, 531, 807 |
| HinP1I | GCGC | 4 cut(s) | 237, 324, 531, 807 |
| HinfI | GANTC | 4 cut(s) | 12, 874, 937, 963 |
| HpaII | CCGG | 8 cut(s) | 240, 258, 528, 600, 613, 708, 816, 1103 |
| HphI | GGTGA | 4 cut(s) | 85, 259, 940, 1106 |
| Hpy166II | GTNNAC | 2 cut(s) | 337, 448 |
| Hpy188I | TCNGA | 7 cut(s) | 73, 331, 695, 792, 879, 922, 942 |
| Hpy188III | TCNNGA | 8 cut(s) | 301, 313, 364, 373, 715, 754, 1033, 1069 |
| Hpy8I | GTNNAC | 2 cut(s) | 337, 448 |
| Hpy99I | CGWCG | 4 cut(s) | 356, 425, 653, 844 |
| HpyAV | CCTTC | 6 cut(s) | 274, 358, 379, 739, 944, 1069 |
| HpyCH4III | ACNGT | 1 cut(s) | 928 |
| HpyCH4IV | ACGT | 2 cut(s) | 686, 852 |
| HpyCH4V | TGCA | 3 cut(s) | 595, 907, 1084 |
| HpyF3I | CTNAG | 3 cut(s) | 692, 755, 876 |
| HpySE526I | ACGT | 2 cut(s) | 686, 852 |
| Hsp92I | GRCGYC | 7 cut(s) | 237, 324, 354, 384, 531, 807, 842 |
| Hsp92II | CATG | 1 cut(s) | 538 |
| HspAI | GCGC | 4 cut(s) | 237, 324, 531, 807 |
| KasI | GGCGCC | 4 cut(s) | 236, 323, 530, 806 |
| KroI | GCCGGC | 2 cut(s) | 239, 527 |
| KroNI | GCCGGC | 2 cut(s) | 241, 529 |
| KspI | CCGCGG | 1 cut(s) | 750 |
| Kzo9I | GATC | 2 cut(s) | 507, 636 |
| LmnI | GCTCC | 7 cut(s) | 260, 315, 431, 574, 781, 818, 1105 |
| Lsp1109I | GCAGC | 2 cut(s) | 598, 883 |
| LweI | GCATC | 4 cut(s) | 261, 414, 582, 1087 |
| MaeI | CTAG | 2 cut(s) | 26, 1041 |
| MaeII | ACGT | 2 cut(s) | 686, 852 |
| MalI | GATC | 2 cut(s) | 509, 638 |
| MbiI | CCGCTC | 1 cut(s) | 223 |
| MboI | GATC | 2 cut(s) | 507, 636 |
| MflI | RGATCY | 1 cut(s) | 636 |
| MhlI | GDGCHC | 4 cut(s) | 229, 570, 579, 786 |
| MluCI | AATT | 2 cut(s) | 488, 1089 |
| Mly113I | GGCGCC | 4 cut(s) | 237, 324, 531, 807 |
| MlyI | GAGTC | 2 cut(s) | 6, 868 |
| MmeI | TCCRAC | 2 cut(s) | 192, 828 |
| MreI | CGCCGGCG | 2 cut(s) | 239, 527 |
| MroNI | GCCGGC | 2 cut(s) | 239, 527 |
| MslI | CAYNNNNRTG | 1 cut(s) | 563 |
| MspA1I | CMGCKG | 3 cut(s) | 402, 589, 749 |
| MspI | CCGG | 8 cut(s) | 240, 258, 528, 600, 613, 708, 816, 1103 |
| MspR9I | CCNGG | 5 cut(s) | 48, 389, 601, 619, 709 |
| MvaI | CCWGG | 3 cut(s) | 48, 389, 619 |
| MvnI | CGCG | 1 cut(s) | 749 |
| NaeI | GCCGGC | 2 cut(s) | 241, 529 |
| NarI | GGCGCC | 4 cut(s) | 237, 324, 531, 807 |
| NciI | CCSGG | 2 cut(s) | 601, 709 |
| NcoI | CCATGG | 1 cut(s) | 534 |
| NdeII | GATC | 2 cut(s) | 507, 636 |
| NgoMIV | GCCGGC | 2 cut(s) | 239, 527 |
| NlaIII | CATG | 1 cut(s) | 538 |
| NmeAIII | GCCGAG | 2 cut(s) | 806, 1008 |
| PaqCI | CACCTGC | 2 cut(s) | 467, 613 |
| PceI | AGGCCT | 1 cut(s) | 30 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 459 |
| PdiI | GCCGGC | 2 cut(s) | 241, 529 |
| PfeI | GAWTC | 2 cut(s) | 937, 963 |
| PflFI | GACNNNGTC | 1 cut(s) | 356 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 159 |
| PkrI | GCNGC | 6 cut(s) | 245, 404, 588, 748, 806, 898 |
| PleI | GAGTC | 2 cut(s) | 6, 868 |
| PluTI | GGCGCC | 4 cut(s) | 240, 327, 534, 810 |
| PpsI | GAGTC | 2 cut(s) | 6, 868 |
| Psp124BI | GAGCTC | 1 cut(s) | 579 |
| Psp1406I | AACGTT | 1 cut(s) | 686 |
| Psp6I | CCWGG | 3 cut(s) | 46, 387, 617 |
| PspGI | CCWGG | 3 cut(s) | 46, 387, 617 |
| PspOMI | GGGCCC | 1 cut(s) | 225 |
| PspPI | GGNCC | 9 cut(s) | 162, 225, 226, 603, 615, 661, 751, 772, 980 |
| PstNI | CAGNNNCTG | 1 cut(s) | 940 |
| PsuI | RGATCY | 1 cut(s) | 636 |
| PsyI | GACNNNGTC | 1 cut(s) | 356 |
| RsaI | GTAC | 1 cut(s) | 737 |
| RsaNI | GTAC | 1 cut(s) | 736 |
| RseI | CAYNNNNRTG | 1 cut(s) | 563 |
| SacI | GAGCTC | 1 cut(s) | 579 |
| SacII | CCGCGG | 1 cut(s) | 750 |
| SatI | GCNGC | 6 cut(s) | 244, 403, 587, 747, 805, 897 |
| Sau3AI | GATC | 2 cut(s) | 507, 636 |
| Sau96I | GGNCC | 9 cut(s) | 162, 225, 226, 603, 615, 661, 751, 772, 980 |
| SchI | GAGTC | 2 cut(s) | 6, 868 |
| ScrFI | CCNGG | 5 cut(s) | 48, 389, 601, 619, 709 |
| SduI | GDGCHC | 4 cut(s) | 229, 570, 579, 786 |
| SfaNI | GCATC | 4 cut(s) | 261, 414, 582, 1087 |
| SfoI | GGCGCC | 4 cut(s) | 238, 325, 532, 808 |
| Sfr303I | CCGCGG | 1 cut(s) | 750 |
| SgrAI | CRCCGGYG | 2 cut(s) | 239, 527 |
| SgrBI | CCGCGG | 1 cut(s) | 750 |
| SinI | GGWCC | 2 cut(s) | 615, 751 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 563 |
| SmlI | CTYRAG | 2 cut(s) | 362, 715 |
| SmoI | CTYRAG | 2 cut(s) | 362, 715 |
| Sse9I | AATT | 2 cut(s) | 488, 1089 |
| SseBI | AGGCCT | 1 cut(s) | 30 |
| SspDI | GGCGCC | 4 cut(s) | 236, 323, 530, 806 |
| SspMI | CTAG | 2 cut(s) | 26, 1041 |
| SstI | GAGCTC | 1 cut(s) | 579 |
| StuI | AGGCCT | 1 cut(s) | 30 |
| StyD4I | CCNGG | 5 cut(s) | 46, 387, 599, 617, 707 |
| StyI | CCWWGG | 5 cut(s) | 183, 378, 534, 570, 810 |
| TaaI | ACNGT | 1 cut(s) | 928 |
| TaiI | ACGT | 2 cut(s) | 689, 855 |
| TaqI | TCGA | 6 cut(s) | 219, 291, 351, 642, 732, 1032 |
| TasI | AATT | 2 cut(s) | 488, 1089 |
| TauI | GCSGC | 4 cut(s) | 246, 405, 749, 807 |
| TfiI | GAWTC | 2 cut(s) | 937, 963 |
| TseI | GCWGC | 2 cut(s) | 586, 896 |
| TspDTI | ATGAA | 2 cut(s) | 215, 983 |
| TspGWI | ACGGA | 1 cut(s) | 202 |
| Tth111I | GACNNNGTC | 1 cut(s) | 356 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 159 |
| VpaK11BI | GGWCC | 2 cut(s) | 615, 751 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 385 |
| XmiI | GTMKAC | 2 cut(s) | 336, 447 |
| XspI | CTAG | 2 cut(s) | 26, 1041 |