Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0002118

Physical Location & Seq

Genomic Coordinates Reverse (-)

66792805 .. 66797503

Gene Structure 4699 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG516400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1656 bp

ATGGCTGGGGTTCGGCGGTCCAGCCGCGTGGCACAGCCAGCGACGGAGGTCGCCGGAAAACAAAAGCGGCCGGCTGAGGAAGATGTAGAGATGGTGGTTTTGGACGAAGAGGAAAAGGATCCATTCAAGGCTGACATTGCGAAGCTTCGTAAGCGATGGGAGCTAGCCTCCGTCATCAACTTTTTGACGGTGTTTGAGCCAGTGATTGGGAAGCTTACTAAAGTATCAGCGGAAGAGATCGAGATGGGTTTGATAACCCCAAACGATTCACTTGCTCAGCTTCACATTGCGATTTTAAAGGGAATACCACCAGCAAGTAAAACATTGGATGGTTCTGATGCATGGGTGACTGTTCTTTGTAAGAAACTTGTTACTTGGTGGCCATGGGTTGCTGAGGGGGAGATTCCACTCGTGGTAGCTAAAGGAGAGGAGATAGCACGTTATAAAGGACTTGATCCGACAGAGCGTTTACTAATGTTAAAAGCACTATGTGAACTCCGAGCCGATCAAGATGATGCAGTGGCTTATATTAATGATGCTCTGAAACAAGGAACTGAAATTTCTTCATTCCGCAAAGATAAGATAGGAGGAGACGAAAAGAGAACTTCTTATTGGTATGATGGAAATACAATAATAGGTCATAGATTATACAAGGAAGTAACTGTCATTGAGTCGAAGACAAAAGTTAGGGGAAAAGGGTGTTTGAACCTACCAAATATCAGTTTCCAGTGGGAAACACTAGCAACCAATCTCGAGGAATTTCAGGAAGTTATGGATGAACTCTCATCAAGCAAAGTTGCAGGAGAACGTGATGCTGCTAAGACTATTGAAACTGATGCTATTCCTGCTCTTGAGAAACTTCAGAAGAAAAAAGAAAGGGAACTGAAAAAGAAACAAAGGCAAGAGAGGCAGCAGAATCTTTTAACAAATTTCTATGGTGCTGGAATTACACGTTCCTGTCGCAACCGCAGGCCTGTCAACTACACATTTGATGATTATGACCGGGTCATTCATGAGGCTATAAAAGTAACAAATAAGAGGAAAACTACTGAAGAGAAAGTGCAAGAAAGGAAGAGTAGAAGAAATGACAAAGCTAACAATGATGCCCCAGAAAGAGACACAAATTCAGAAGATTCAGATAAAGAAAGTGATTCCACAAACAGTGATAATAACCATTCTGGTAAGAAGGATGATGAGGATTCTGGTAAGAAGGATGATCAGGATTCTGGTTACTATTCTAGTAACACTGAAAGCGACATGCTTGAAGATGCTGCTGATGACAAGGATGATAACAATTGGGATGGCACCAAGGATGAGGATAATGATGAAGAAGAAGATGGTGATCTCAGTGACAAACGCAATTCTAAGCAAGAGAAGAACAATGCTCAGACTGATAAAATTTCCCAAAAATGGCCAGCTTTTGGTGTCCGCTGGAGTACAAGACTAGCAGGAGGCACTAGTCATCAAGTCGTGGAAAACAGGAACTTGGGTGCTAAGAATAGGTCGAGACAAAGACCTGTCTGCAACTCTGCCCTTGACTCGCTTGTGATCCAAGACTCTGAGGATGAAAACTCAGAGGGACATGAAAACAGTGAGACCTCAGAGCATGAAAACCCATCCCCAGATACCGATCCGGAAGAAGTCAGTGAAAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WHIM1

Protein Analysis

551

Amino Acids

62.27

Weight (kDa)

4.94

Isoelectric Point (pI)

51.92

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002118)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G25580
fragaria_vesca	FvH4_2g30480 FvH4_2g30480 FvH4_2g30480
malus_domestica	MD08G1131900.v1.1
prunus_persica	Prupe.1G464000_v2.0.a1
pyrus_communis	pycom08g11050 pycom10g20470
rosa_chinensis	RchiOBHm_Chr2g0098451 RchiOBHm_Chr3g0485791 RchiOBHm_Chr6g0279171 RchiOBHm_Chr6g0312561
rosa_laevigata	RLG00000010046 RLG00000010316 RLG00000022980 RLG00000034454
rosa_multiflora	Rmu_sc0003094.1_g000011 Rmu_sc0008363.1_g000006
rosa_roxburghii	Rroxscaffold_1G00034380 Rroxscaffold_2G00107370 Rroxscaffold_3G00241050 Rroxscaffold_3G00241960 Rroxscaffold_6G00414860 Rroxscaffold_7G00156690 Rroxscaffold_7G00189060
rosa_rugosa	Rorug01G0191100 Rorug04G0105900 Rorug06G0123300 Rorug06G0197300 Rorug06G0215800 Rorug06G0396500
rosa_samantha	Rh1BG106100 Rh1DG070000 Rh2CG403200 Rh3CG093200 Rh4BG061300 Rh5CG484500 Rh6AG514100 Rh6CG530800 Rh6DG516400 Rh7DG190800
rosa_wichuraiana	Rw1G001170 Rw2G026220 Rw6G044670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	444
AccB1I	GGYRCC	1 cut(s)	1304
AccB7I	CCANNNNNTGG	2 cut(s)	206, 1421
AccII	CGCG	1 cut(s)	27
AccIII	TCCGGA	1 cut(s)	1633
AciI	CCGC	7 cut(s)	16, 25, 67, 230, 571, 967, 1429
AclWI	GGATC	5 cut(s)	113, 126, 449, 1543, 1625
AcoI	YGGCCR	3 cut(s)	68, 380, 1412
AcsI	RAATTY	5 cut(s)	558, 758, 928, 1123, 1398
AcuI	CTGAAG	2 cut(s)	845, 1071
AdeI	CACNNNGTG	1 cut(s)	491
AfaI	GTAC	1 cut(s)	1438
AfiI	CCNNNNNNNGG	3 cut(s)	206, 1410, 1421
AflIII	ACRYGT	1 cut(s)	950
AgsI	TTSAA	4 cut(s)	127, 706, 830, 1265
AhlI	ACTAGT	1 cut(s)	1457
AjuI	GAANNNNNNNTTGG	2 cut(s)	595, 627
AluBI	AGCT	7 cut(s)	145, 163, 214, 280, 419, 1094, 1418
AluI	AGCT	7 cut(s)	145, 163, 214, 280, 419, 1094, 1418
Alw26I	GTCTC	4 cut(s)	585, 1110, 1501, 1589
AlwI	GGATC	5 cut(s)	113, 126, 449, 1543, 1625
Ama87I	CYCGRG	1 cut(s)	752
Aor13HI	TCCGGA	1 cut(s)	1633
AoxI	GGCC	4 cut(s)	68, 380, 971, 1412
ApeKI	GCWGC	3 cut(s)	815, 910, 1271
ApoI	RAATTY	5 cut(s)	558, 758, 928, 1123, 1398
AseI	ATTAAT	1 cut(s)	531
AspS9I	GGNCC	1 cut(s)	18
AsuC2I	CCSGG	1 cut(s)	1004
AsuHPI	GGTGA	2 cut(s)	358, 1352
AsuNHI	GCTAGC	1 cut(s)	163
AvaI	CYCGRG	1 cut(s)	752
AvaII	GGWCC	1 cut(s)	18
BaeI	ACNNNNGTAYC	2 cut(s)	207, 240
BalI	TGGCCA	2 cut(s)	382, 1414
BamHI	GGATCC	1 cut(s)	118
BanI	GGYRCC	1 cut(s)	1304
BauI	CACGAG	1 cut(s)	410
BbsI	GAAGAC	1 cut(s)	683
BbvCI	CCTCAGC	2 cut(s)	75, 393
BbvI	GCAGC	3 cut(s)	802, 922, 1258
BccI	CCATC	8 cut(s)	85, 150, 238, 323, 614, 1295, 1331, 1624
BcgI	CGANNNNNNTGC	2 cut(s)	254, 288
BclI	TGATCA	1 cut(s)	1216
BcnI	CCSGG	1 cut(s)	1004
BcoDI	GTCTC	4 cut(s)	585, 1110, 1501, 1589
BcuI	ACTAGT	1 cut(s)	1457
BfaI	CTAG	6 cut(s)	164, 740, 1239, 1445, 1458, 1654
BisI	GCNGC	5 cut(s)	25, 68, 816, 911, 1272
BlpI	GCTNAGC	1 cut(s)	276
BlsI	GCNGC	5 cut(s)	26, 69, 817, 912, 1273
Bme1390I	CCNGG	1 cut(s)	1004
Bme18I	GGWCC	1 cut(s)	18
BmeT110I	CYCGRG	1 cut(s)	752
BmgT120I	GGNCC	1 cut(s)	18
BmiI	GGNNCC	2 cut(s)	120, 1306
BmrFI	CCNGG	1 cut(s)	1004
BmsI	GCATC	7 cut(s)	328, 505, 526, 802, 826, 1093, 1258
BmtI	GCTAGC	1 cut(s)	167
BoxI	GACNNNNGTC	1 cut(s)	47
BpiI	GAAGAC	1 cut(s)	683
BplI	GAGNNNNNCTC	2 cut(s)	152, 184
BpmI	CTGGAG	1 cut(s)	1453
Bpu10I	CCTNAGC	2 cut(s)	75, 393
Bpu1102I	GCTNAGC	1 cut(s)	276
BpuEI	CTTGAG	1 cut(s)	872
BpuMI	CCSGG	1 cut(s)	1004
BsaBI	GATNNNNATC	2 cut(s)	1341, 1629
BsaI	GGTCTC	1 cut(s)	1589
BsaJI	CCNNGG	2 cut(s)	383, 1308
BsaWI	WCCGGW	1 cut(s)	1633
Bsc4I	CCNNNNNNNGG	3 cut(s)	206, 1410, 1421
Bse118I	RCCGGY	1 cut(s)	70
Bse1I	ACTGG	2 cut(s)	200, 727
Bse3DI	GCAATG	2 cut(s)	135, 285
Bse8I	GATNNNNATC	2 cut(s)	1341, 1629
BseAI	TCCGGA	1 cut(s)	1633
BseDI	CCNNGG	2 cut(s)	383, 1308
BseGI	GGATG	9 cut(s)	334, 781, 1195, 1219, 1291, 1306, 1318, 1570, 1616
BseJI	GATNNNNATC	2 cut(s)	1341, 1629
BseLI	CCNNNNNNNGG	3 cut(s)	206, 1410, 1421
BseMI	GCAATG	2 cut(s)	135, 285
BseMII	CTCAG	8 cut(s)	66, 290, 384, 1360, 1400, 1551, 1587, 1614
BseNI	ACTGG	2 cut(s)	200, 727
BseRI	GAGGAG	2 cut(s)	443, 603
BseX3I	CGGCCG	1 cut(s)	68
BseXI	GCAGC	3 cut(s)	802, 922, 1258
BseYI	CCCAGC	1 cut(s)	5
Bsh1236I	CGCG	1 cut(s)	27
Bsh1285I	CGRYCG	1 cut(s)	71
BshFI	GGCC	4 cut(s)	70, 382, 973, 1414
BshNI	GGYRCC	1 cut(s)	1304
BsiEI	CGRYCG	1 cut(s)	71
BsiHKCI	CYCGRG	1 cut(s)	752
BsiSI	CCGG	4 cut(s)	54, 71, 1003, 1634
BslFI	GGGAC	1 cut(s)	1593
BslI	CCNNNNNNNGG	3 cut(s)	206, 1410, 1421
BsmAI	GTCTC	4 cut(s)	585, 1110, 1501, 1589
BsmBI	CGTCTC	1 cut(s)	585
BsmFI	GGGAC	1 cut(s)	1593
BsnI	GGCC	4 cut(s)	70, 382, 973, 1414
Bso31I	GGTCTC	1 cut(s)	1589
BsoBI	CYCGRG	1 cut(s)	752
Bsp13I	TCCGGA	1 cut(s)	1633
Bsp143I	GATC	8 cut(s)	118, 237, 454, 505, 1216, 1342, 1548, 1630
Bsp1720I	GCTNAGC	1 cut(s)	276
Bsp19I	CCATGG	1 cut(s)	383
BspACI	CCGC	7 cut(s)	16, 25, 67, 230, 571, 967, 1429
BspANI	GGCC	4 cut(s)	70, 382, 973, 1414
BspCNI	CTCAG	8 cut(s)	67, 289, 385, 1359, 1399, 1552, 1586, 1613
BspEI	TCCGGA	1 cut(s)	1633
BspFNI	CGCG	1 cut(s)	27
BspHI	TCATGA	1 cut(s)	1012
BspLI	GGNNCC	2 cut(s)	120, 1306
BspOI	GCTAGC	1 cut(s)	167
BspPI	GGATC	5 cut(s)	113, 126, 449, 1543, 1625
BspT107I	GGYRCC	1 cut(s)	1304
BspTNI	GGTCTC	1 cut(s)	1589
BsrDI	GCAATG	2 cut(s)	135, 285
BsrFI	RCCGGY	1 cut(s)	70
BsrI	ACTGG	2 cut(s)	200, 727
BssAI	RCCGGY	1 cut(s)	70
BssECI	CCNNGG	2 cut(s)	383, 1308
BssMI	GATC	8 cut(s)	118, 237, 454, 505, 1216, 1342, 1548, 1630
BssSI	CACGAG	1 cut(s)	410
BssT1I	CCWWGG	2 cut(s)	383, 1308
Bst2BI	CACGAG	1 cut(s)	410
Bst4CI	ACNGT	5 cut(s)	190, 352, 664, 1163, 1592
Bst6I	CTCTTC	4 cut(s)	102, 228, 1047, 1067
BstC8I	GCNNGC	5 cut(s)	39, 72, 165, 971, 1416
BstDSI	CCRYGG	1 cut(s)	383
BstF5I	GGATG	9 cut(s)	334, 781, 1195, 1219, 1291, 1306, 1318, 1570, 1616
BstFNI	CGCG	1 cut(s)	27
BstKTI	GATC	8 cut(s)	121, 240, 457, 508, 1219, 1345, 1551, 1633
BstMAI	GTCTC	4 cut(s)	585, 1110, 1501, 1589
BstMBI	GATC	8 cut(s)	118, 237, 454, 505, 1216, 1342, 1548, 1630
BstMCI	CGRYCG	1 cut(s)	71
BstMWI	GCNNNNNNNGC	6 cut(s)	38, 137, 151, 160, 845, 907
BstNSI	RCATGY	1 cut(s)	1261
BstPAI	GACNNNNGTC	1 cut(s)	47
BstSCI	CCNGG	1 cut(s)	1002
BstUI	CGCG	1 cut(s)	27
BstV1I	GCAGC	3 cut(s)	802, 922, 1258
BstV2I	GAAGAC	1 cut(s)	683
BstX2I	RGATCY	1 cut(s)	118
BstXI	CCANNNNNNTGG	1 cut(s)	28
BstYI	RGATCY	1 cut(s)	118
BstZI	CGGCCG	1 cut(s)	68
BsuRI	GGCC	4 cut(s)	70, 382, 973, 1414
BtgI	CCRYGG	1 cut(s)	383
BtgZI	GCGATG	1 cut(s)	169
BtsCI	GGATG	9 cut(s)	334, 781, 1195, 1219, 1291, 1306, 1318, 1570, 1616
BtsI	GCAGTG	1 cut(s)	525
BtsIMutI	CAGTG	8 cut(s)	207, 525, 734, 1168, 1245, 1354, 1597, 1651
Cac8I	GCNNGC	5 cut(s)	39, 72, 165, 971, 1416
CciI	TCATGA	1 cut(s)	1012
Cfr10I	RCCGGY	1 cut(s)	70
Cfr13I	GGNCC	1 cut(s)	18
Csp6I	GTAC	1 cut(s)	1437
CviAII	CATG	6 cut(s)	342, 384, 1013, 1258, 1583, 1607
CviQI	GTAC	1 cut(s)	1437
DpnI	GATC	8 cut(s)	120, 239, 456, 507, 1218, 1344, 1550, 1632
DpnII	GATC	8 cut(s)	118, 237, 454, 505, 1216, 1342, 1548, 1630
DraI	TTTAAA	1 cut(s)	297
DraIII	CACNNNGTG	1 cut(s)	491
EaeI	YGGCCR	3 cut(s)	68, 380, 1412
EagI	CGGCCG	1 cut(s)	68
Eam1104I	CTCTTC	4 cut(s)	102, 228, 1047, 1067
EarI	CTCTTC	4 cut(s)	102, 228, 1047, 1067
EclXI	CGGCCG	1 cut(s)	68
Eco130I	CCWWGG	2 cut(s)	383, 1308
Eco147I	AGGCCT	1 cut(s)	973
Eco31I	GGTCTC	1 cut(s)	1589
Eco47I	GGWCC	1 cut(s)	18
Eco52I	CGGCCG	1 cut(s)	68
Eco57I	CTGAAG	2 cut(s)	845, 1071
Eco88I	CYCGRG	1 cut(s)	752
EcoT14I	CCWWGG	2 cut(s)	383, 1308
EcoT22I	ATGCAT	1 cut(s)	343
ErhI	CCWWGG	2 cut(s)	383, 1308
Esp3I	CGTCTC	1 cut(s)	585
FaeI	CATG	6 cut(s)	345, 387, 1016, 1261, 1586, 1610
FaqI	GGGAC	1 cut(s)	1593
FatI	CATG	6 cut(s)	341, 383, 1012, 1257, 1582, 1606
FbaI	TGATCA	1 cut(s)	1216
Fnu4HI	GCNGC	5 cut(s)	25, 68, 816, 911, 1272
FokI	GGATG	9 cut(s)	341, 788, 1202, 1226, 1298, 1313, 1325, 1577, 1603
Fsp4HI	GCNGC	5 cut(s)	25, 68, 816, 911, 1272
FspBI	CTAG	6 cut(s)	164, 740, 1239, 1445, 1458, 1654
GluI	GCNGC	5 cut(s)	25, 68, 816, 911, 1272
GsaI	CCCAGC	1 cut(s)	9
GsuI	CTGGAG	1 cut(s)	1453
HaeIII	GGCC	4 cut(s)	70, 382, 973, 1414
HapII	CCGG	4 cut(s)	54, 71, 1003, 1634
Hin1II	CATG	6 cut(s)	345, 387, 1016, 1261, 1586, 1610
HincII	GTYRAC	1 cut(s)	979
HindII	GTYRAC	1 cut(s)	979
HindIII	AAGCTT	2 cut(s)	143, 212
HpaII	CCGG	4 cut(s)	54, 71, 1003, 1634
HphI	GGTGA	2 cut(s)	358, 1352
Hpy166II	GTNNAC	3 cut(s)	470, 494, 979
Hpy188III	TCNNGA	9 cut(s)	241, 509, 752, 764, 851, 1013, 1220, 1506, 1634
Hpy8I	GTNNAC	3 cut(s)	470, 494, 979
Hpy99I	CGWCG	1 cut(s)	46
HpyAV	CCTTC	2 cut(s)	1180, 1204
HpyCH4III	ACNGT	5 cut(s)	190, 352, 664, 1163, 1592
HpyCH4IV	ACGT	3 cut(s)	439, 808, 952
HpyCH4V	TGCA	5 cut(s)	341, 518, 800, 1063, 1524
HpyF10VI	GCNNNNNNNGC	6 cut(s)	38, 137, 151, 160, 845, 907
HpySE526I	ACGT	3 cut(s)	439, 808, 952
Hsp92II	CATG	6 cut(s)	345, 387, 1016, 1261, 1586, 1610
Kpn2I	TCCGGA	1 cut(s)	1633
KroI	GCCGGC	1 cut(s)	70
KroNI	GCCGGC	1 cut(s)	72
Ksp22I	TGATCA	1 cut(s)	1216
Kzo9I	GATC	8 cut(s)	118, 237, 454, 505, 1216, 1342, 1548, 1630
LmnI	GCTCC	1 cut(s)	160
Lsp1109I	GCAGC	3 cut(s)	802, 922, 1258
LweI	GCATC	7 cut(s)	328, 505, 526, 802, 826, 1093, 1258
MaeI	CTAG	6 cut(s)	164, 740, 1239, 1445, 1458, 1654
MaeII	ACGT	3 cut(s)	439, 808, 952
MaeIII	GTNAC	7 cut(s)	346, 370, 658, 1027, 1229, 1241, 1349
MalI	GATC	8 cut(s)	120, 239, 456, 507, 1218, 1344, 1550, 1632
MboI	GATC	8 cut(s)	118, 237, 454, 505, 1216, 1342, 1548, 1630
MfeI	CAATTG	1 cut(s)	1294
MflI	RGATCY	1 cut(s)	118
MlsI	TGGCCA	2 cut(s)	382, 1414
MluCI	AATT	8 cut(s)	558, 758, 928, 945, 1123, 1294, 1360, 1398
MluNI	TGGCCA	2 cut(s)	382, 1414
MlyI	GAGTC	3 cut(s)	680, 1532, 1550
MmeI	TCCRAC	1 cut(s)	482
Mox20I	TGGCCA	2 cut(s)	382, 1414
Mph1103I	ATGCAT	1 cut(s)	343
MroI	TCCGGA	1 cut(s)	1633
MroNI	GCCGGC	1 cut(s)	70
MscI	TGGCCA	2 cut(s)	382, 1414
MseI	TTAA	4 cut(s)	296, 479, 531, 923
Msp20I	TGGCCA	2 cut(s)	382, 1414
MspA1I	CMGCKG	2 cut(s)	230, 1431
MspI	CCGG	4 cut(s)	54, 71, 1003, 1634
MspR9I	CCNGG	1 cut(s)	1004
MunI	CAATTG	1 cut(s)	1294
MvnI	CGCG	1 cut(s)	27
MwoI	GCNNNNNNNGC	6 cut(s)	38, 137, 151, 160, 845, 907
NaeI	GCCGGC	1 cut(s)	72
NciI	CCSGG	1 cut(s)	1004
NcoI	CCATGG	1 cut(s)	383
NdeII	GATC	8 cut(s)	118, 237, 454, 505, 1216, 1342, 1548, 1630
NgoMIV	GCCGGC	1 cut(s)	70
NheI	GCTAGC	1 cut(s)	163
NlaIII	CATG	6 cut(s)	345, 387, 1016, 1261, 1586, 1610
NlaIV	GGNNCC	2 cut(s)	120, 1306
NmuCI	GTSAC	2 cut(s)	346, 1349
NsiI	ATGCAT	1 cut(s)	343
NspI	RCATGY	1 cut(s)	1261
PaeR7I	CTCGAG	1 cut(s)	752
PagI	TCATGA	1 cut(s)	1012
PceI	AGGCCT	1 cut(s)	973
PdiI	GCCGGC	1 cut(s)	72
PfeI	GAWTC	7 cut(s)	266, 403, 916, 1133, 1151, 1199, 1223
PflFI	GACNNNGTC	1 cut(s)	1004
PflMI	CCANNNNNTGG	2 cut(s)	206, 1421
PkrI	GCNGC	5 cut(s)	26, 69, 817, 912, 1273
PleI	GAGTC	3 cut(s)	679, 1532, 1550
PpsI	GAGTC	3 cut(s)	679, 1532, 1550
PshAI	GACNNNNGTC	1 cut(s)	47
PshBI	ATTAAT	1 cut(s)	531
PsiI	TTATAA	1 cut(s)	444
PspFI	CCCAGC	1 cut(s)	5
PspN4I	GGNNCC	2 cut(s)	120, 1306
PspPI	GGNCC	1 cut(s)	18
PsuI	RGATCY	1 cut(s)	118
PsyI	GACNNNGTC	1 cut(s)	1004
RsaI	GTAC	1 cut(s)	1438
RsaNI	GTAC	1 cut(s)	1437
SaqAI	TTAA	4 cut(s)	296, 479, 531, 923
SatI	GCNGC	5 cut(s)	25, 68, 816, 911, 1272
Sau3AI	GATC	8 cut(s)	118, 237, 454, 505, 1216, 1342, 1548, 1630
Sau96I	GGNCC	1 cut(s)	18
SchI	GAGTC	3 cut(s)	680, 1532, 1550
ScrFI	CCNGG	1 cut(s)	1004
SfaNI	GCATC	7 cut(s)	328, 505, 526, 802, 826, 1093, 1258
Sfr274I	CTCGAG	1 cut(s)	752
SinI	GGWCC	1 cut(s)	18
SlaI	CTCGAG	1 cut(s)	752
SmlI	CTYRAG	2 cut(s)	752, 851
SmoI	CTYRAG	2 cut(s)	752, 851
SpeI	ACTAGT	1 cut(s)	1457
Sse9I	AATT	8 cut(s)	558, 758, 928, 945, 1123, 1294, 1360, 1398
SseBI	AGGCCT	1 cut(s)	973
SsiI	CCGC	7 cut(s)	16, 25, 67, 230, 571, 967, 1429
SspMI	CTAG	6 cut(s)	164, 740, 1239, 1445, 1458, 1654
StuI	AGGCCT	1 cut(s)	973
StyD4I	CCNGG	1 cut(s)	1002
StyI	CCWWGG	2 cut(s)	383, 1308
TaaI	ACNGT	5 cut(s)	190, 352, 664, 1163, 1592
TaiI	ACGT	3 cut(s)	442, 811, 955
TaqI	TCGA	4 cut(s)	240, 674, 753, 1505
TasI	AATT	8 cut(s)	558, 758, 928, 945, 1123, 1294, 1360, 1398
TatI	WGTACW	1 cut(s)	1436
TauI	GCSGC	2 cut(s)	27, 70
TfiI	GAWTC	7 cut(s)	266, 403, 916, 1133, 1151, 1199, 1223
Tru1I	TTAA	4 cut(s)	296, 479, 531, 923
Tru9I	TTAA	4 cut(s)	296, 479, 531, 923
TscAI	CASTG	8 cut(s)	207, 525, 734, 1168, 1252, 1354, 1597, 1651
TseFI	GTSAC	2 cut(s)	346, 1349
TseI	GCWGC	3 cut(s)	815, 910, 1271
Tsp45I	GTSAC	2 cut(s)	346, 1349
TspDTI	ATGAA	7 cut(s)	555, 792, 1001, 1341, 1581, 1599, 1623
TspGWI	ACGGA	2 cut(s)	59, 160
TspRI	CASTG	8 cut(s)	207, 525, 734, 1168, 1252, 1354, 1597, 1651
Tth111I	GACNNNGTC	1 cut(s)	1004
Van91I	CCANNNNNTGG	2 cut(s)	206, 1421
VpaK11BI	GGWCC	1 cut(s)	18
VspI	ATTAAT	1 cut(s)	531
XapI	RAATTY	5 cut(s)	558, 758, 928, 1123, 1398
XceI	RCATGY	1 cut(s)	1261
XhoI	CTCGAG	1 cut(s)	752
XspI	CTAG	6 cut(s)	164, 740, 1239, 1445, 1458, 1654
Zsp2I	ATGCAT	1 cut(s)	343

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.