Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002118

Physical Location & Seq

Genomic Coordinates Reverse (-)

69131402 .. 69135815

Gene Structure 4414 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ28118

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1632 bp

ATGGCTGGGGTTCGGCGGTCCAGCCGCGTGGCACAGCCAGCGACGGAGGTCGCCGGAAAACAAAAGCGGCCGGCGGAGGAAGACGTAGAGATGGTGGTTTTGGACGAAGAGGAAAAGGATCCATTCAAGGCTGAGATTGCGAAACTTCGTAAGCGATGGGAGCTAGCCTCCGTCATCAACTTTTTGACGGTGTTTGAGCCAGTGATTGGGAAGCTTACTAAAGTATCAGCGGAAGAGATCGAGATGGGTTTGATAACCCCAAACGATTCACTTGCTCAGCTTCACATTGCGATTTTAAAGGGAATACCACCAGCAAGTAAAACATTGGATGGTTCTGATGCATGGGTGACTGTTCTTTGTAAGAAACTTGTTACTTGGTGGCCATGGGTTGCTGAGGGGGAGATTCCACTCGTGGTAGCTAAAGGAGAGGAGATAGCACGTTATAAAGGACTTGATCCGACAGAGCGTTTACTAATGTTAAAAGCACTCTGTGAACTCCGAGCCGATCAAGATGATGCAGTGGCTTATATTAATGATGCTCTGAAACAAGGAACTGAAATTTCTTCATTCCGCAAAGATAAGATAGGAGGAGACGACAAGAGAACTTCTTATTGGTATGATGGAAATACAATAATAGGTCATAGATTATACAAGGAAGTAACTGTCATTGAATCGAAGACAAAAGTTAGGGGAAAAGGGGGTTTGAACCTACCAAATATCAGTTTCCAGTGGGAAACACTAGCAACCAATCTCGAGGAATTTCAGAAGGTTATGGATGAACTCTCATCAAGCAAAGTTGCAGGAGAACGTGGTGCTGCTAAGACTATTGAAACTGATGCTATTCCTGCTCTTGAGAAACTTCAGAAGAAAAAAGAAAGGGAACTGAAAAAGAAACAAAGGCAAGAGAGGCAGCAGAATCTTTTAACAAATTTCTATGGTGCTGGAATTACACGTTCCTGTCGCAACCGCAGGCCTGTCAACTACACATTTGATGATTATGACCGGGTCATTCATGAGGCTATAAAAGTAACAAATAAGAGGAAAACTACCGAAGAGAAAGTGCAAGAAAGGAAGAGTAGAAGAAATGACAAAGCTAACAATGATGCCCCAGAAAGAGACACAAATTCAGAAGATTCAGATAAAGAAAGTGATTCCACAAACAGTGATAATAACCATTCTGGTAAGAAGGATGATCAGGATTCTGGTTACTATTCTAGTAACACTGAAAGCGACATGCTTGAAGATGCTGCTGATGATGAGGATGATAACAATTGGGATGGCACCAAGGATGAGGATAATGATGAAGAAGAAGATGGTGATCTCAGTGACAAACGCAATTCTAAGCAAGAGAAGAACAATGCTCAGACTGATAAAATTTCCCAAAAATGGCCAGCTTTTGGTGTCCGCTGGAGTACAAGACTAGCAGGAGGCACTAGTCATCAAGTCGTGGAAAACAGGAACTTGGGTGCTAAGAATAGGTCGAGACAAAGACCTGTCTGCAACTCTGCCCTTGACTCTCTTGTGATCCAAGACTCTGAGGATGAAAACTCAGGGGGACATGAAAACAGTGAGACCTCAGAGCATGAAAACCCATCCCCAGATACCGATCCGGAAGAAGTCAGTGAAAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WHIM1

Protein Analysis

543

Amino Acids

61.2

Weight (kDa)

5.02

Isoelectric Point (pI)

52.13

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002118)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G25580
fragaria_vesca	FvH4_2g30480 FvH4_2g30480 FvH4_2g30480
malus_domestica	MD08G1131900.v1.1
prunus_persica	Prupe.1G464000_v2.0.a1
pyrus_communis	pycom08g11050 pycom10g20470
rosa_chinensis	RchiOBHm_Chr2g0098451 RchiOBHm_Chr3g0485791 RchiOBHm_Chr6g0279171 RchiOBHm_Chr6g0312561
rosa_laevigata	RLG00000010046 RLG00000010316 RLG00000022980 RLG00000034454
rosa_multiflora	Rmu_sc0003094.1_g000011 Rmu_sc0008363.1_g000006
rosa_roxburghii	Rroxscaffold_1G00034380 Rroxscaffold_2G00107370 Rroxscaffold_3G00241050 Rroxscaffold_3G00241960 Rroxscaffold_6G00414860 Rroxscaffold_7G00156690 Rroxscaffold_7G00189060
rosa_rugosa	Rorug01G0191100 Rorug04G0105900 Rorug06G0123300 Rorug06G0197300 Rorug06G0215800 Rorug06G0396500
rosa_samantha	Rh1BG106100 Rh1DG070000 Rh2CG403200 Rh3CG093200 Rh4BG061300 Rh5CG484500 Rh6AG514100 Rh6CG530800 Rh6DG516400 Rh7DG190800
rosa_wichuraiana	Rw1G001170 Rw2G026220 Rw6G044670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	444
AccB1I	GGYRCC	1 cut(s)	1280
AccB7I	CCANNNNNTGG	2 cut(s)	206, 1397
AccII	CGCG	1 cut(s)	27
AccIII	TCCGGA	1 cut(s)	1609
AciI	CCGC	8 cut(s)	16, 25, 67, 74, 230, 571, 967, 1405
AclWI	GGATC	5 cut(s)	113, 126, 449, 1519, 1601
AcoI	YGGCCR	3 cut(s)	68, 380, 1388
AcsI	RAATTY	5 cut(s)	558, 758, 928, 1123, 1374
AcuI	CTGAAG	1 cut(s)	845
AdeI	CACNNNGTG	1 cut(s)	491
AfaI	GTAC	1 cut(s)	1414
AfiI	CCNNNNNNNGG	3 cut(s)	206, 1386, 1397
AflIII	ACRYGT	1 cut(s)	950
AgsI	TTSAA	5 cut(s)	127, 671, 706, 830, 1241
AhlI	ACTAGT	1 cut(s)	1433
AjuI	GAANNNNNNNTTGG	2 cut(s)	595, 627
AluBI	AGCT	7 cut(s)	163, 214, 280, 419, 1094, 1394, 1629
AluI	AGCT	7 cut(s)	163, 214, 280, 419, 1094, 1394, 1629
Alw26I	GTCTC	4 cut(s)	585, 1110, 1477, 1565
AlwI	GGATC	5 cut(s)	113, 126, 449, 1519, 1601
Ama87I	CYCGRG	1 cut(s)	752
Aor13HI	TCCGGA	1 cut(s)	1609
AoxI	GGCC	4 cut(s)	68, 380, 971, 1388
ApeKI	GCWGC	3 cut(s)	815, 910, 1247
ApoI	RAATTY	5 cut(s)	558, 758, 928, 1123, 1374
AseI	ATTAAT	1 cut(s)	531
AspS9I	GGNCC	1 cut(s)	18
AsuC2I	CCSGG	1 cut(s)	1004
AsuHPI	GGTGA	2 cut(s)	358, 1328
AsuNHI	GCTAGC	1 cut(s)	163
AvaI	CYCGRG	1 cut(s)	752
AvaII	GGWCC	1 cut(s)	18
BaeI	ACNNNNGTAYC	2 cut(s)	207, 240
BalI	TGGCCA	2 cut(s)	382, 1390
BamHI	GGATCC	1 cut(s)	118
BanI	GGYRCC	1 cut(s)	1280
BauI	CACGAG	1 cut(s)	410
BbsI	GAAGAC	2 cut(s)	87, 683
BbvCI	CCTCAGC	1 cut(s)	393
BbvI	GCAGC	3 cut(s)	802, 922, 1234
BccI	CCATC	8 cut(s)	85, 150, 238, 323, 614, 1271, 1307, 1600
BcgI	CGANNNNNNTGC	2 cut(s)	254, 288
BclI	TGATCA	1 cut(s)	1192
BcnI	CCSGG	1 cut(s)	1004
BcoDI	GTCTC	4 cut(s)	585, 1110, 1477, 1565
BcuI	ACTAGT	1 cut(s)	1433
BfaI	CTAG	6 cut(s)	164, 740, 1215, 1421, 1434, 1630
BisI	GCNGC	5 cut(s)	25, 68, 816, 911, 1248
BlpI	GCTNAGC	1 cut(s)	276
BlsI	GCNGC	5 cut(s)	26, 69, 817, 912, 1249
Bme1390I	CCNGG	1 cut(s)	1004
Bme18I	GGWCC	1 cut(s)	18
BmeT110I	CYCGRG	1 cut(s)	752
BmgT120I	GGNCC	1 cut(s)	18
BmiI	GGNNCC	2 cut(s)	120, 1282
BmrFI	CCNGG	1 cut(s)	1004
BmsI	GCATC	6 cut(s)	328, 505, 526, 826, 1093, 1234
BmtI	GCTAGC	1 cut(s)	167
BoxI	GACNNNNGTC	1 cut(s)	47
BpiI	GAAGAC	2 cut(s)	87, 683
BplI	GAGNNNNNCTC	2 cut(s)	152, 184
BpmI	CTGGAG	1 cut(s)	1429
Bpu10I	CCTNAGC	1 cut(s)	393
Bpu1102I	GCTNAGC	1 cut(s)	276
BpuEI	CTTGAG	1 cut(s)	872
BpuMI	CCSGG	1 cut(s)	1004
BsaBI	GATNNNNATC	2 cut(s)	1317, 1605
BsaI	GGTCTC	1 cut(s)	1565
BsaJI	CCNNGG	2 cut(s)	383, 1284
BsaWI	WCCGGW	1 cut(s)	1609
Bsc4I	CCNNNNNNNGG	3 cut(s)	206, 1386, 1397
Bse118I	RCCGGY	1 cut(s)	70
Bse1I	ACTGG	2 cut(s)	200, 727
Bse3DI	GCAATG	1 cut(s)	285
Bse8I	GATNNNNATC	2 cut(s)	1317, 1605
BseAI	TCCGGA	1 cut(s)	1609
BseDI	CCNNGG	2 cut(s)	383, 1284
BseGI	GGATG	8 cut(s)	334, 781, 1195, 1267, 1282, 1294, 1546, 1592
BseJI	GATNNNNATC	2 cut(s)	1317, 1605
BseLI	CCNNNNNNNGG	3 cut(s)	206, 1386, 1397
BseMI	GCAATG	1 cut(s)	285
BseMII	CTCAG	8 cut(s)	123, 290, 384, 1336, 1376, 1527, 1563, 1590
BseNI	ACTGG	2 cut(s)	200, 727
BseRI	GAGGAG	2 cut(s)	443, 603
BseX3I	CGGCCG	1 cut(s)	68
BseXI	GCAGC	3 cut(s)	802, 922, 1234
BseYI	CCCAGC	1 cut(s)	5
Bsh1236I	CGCG	1 cut(s)	27
Bsh1285I	CGRYCG	1 cut(s)	71
BshFI	GGCC	4 cut(s)	70, 382, 973, 1390
BshNI	GGYRCC	1 cut(s)	1280
BsiEI	CGRYCG	1 cut(s)	71
BsiHKCI	CYCGRG	1 cut(s)	752
BsiSI	CCGG	4 cut(s)	54, 71, 1003, 1610
BslFI	GGGAC	1 cut(s)	1569
BslI	CCNNNNNNNGG	3 cut(s)	206, 1386, 1397
BsmAI	GTCTC	4 cut(s)	585, 1110, 1477, 1565
BsmBI	CGTCTC	1 cut(s)	585
BsmFI	GGGAC	1 cut(s)	1569
BsnI	GGCC	4 cut(s)	70, 382, 973, 1390
Bso31I	GGTCTC	1 cut(s)	1565
BsoBI	CYCGRG	1 cut(s)	752
Bsp13I	TCCGGA	1 cut(s)	1609
Bsp143I	GATC	8 cut(s)	118, 237, 454, 505, 1192, 1318, 1524, 1606
Bsp1720I	GCTNAGC	1 cut(s)	276
Bsp19I	CCATGG	1 cut(s)	383
BspACI	CCGC	8 cut(s)	16, 25, 67, 74, 230, 571, 967, 1405
BspANI	GGCC	4 cut(s)	70, 382, 973, 1390
BspCNI	CTCAG	8 cut(s)	124, 289, 385, 1335, 1375, 1528, 1562, 1589
BspEI	TCCGGA	1 cut(s)	1609
BspFNI	CGCG	1 cut(s)	27
BspHI	TCATGA	1 cut(s)	1012
BspLI	GGNNCC	2 cut(s)	120, 1282
BspOI	GCTAGC	1 cut(s)	167
BspPI	GGATC	5 cut(s)	113, 126, 449, 1519, 1601
BspT107I	GGYRCC	1 cut(s)	1280
BspTNI	GGTCTC	1 cut(s)	1565
BsrDI	GCAATG	1 cut(s)	285
BsrFI	RCCGGY	1 cut(s)	70
BsrI	ACTGG	2 cut(s)	200, 727
BssAI	RCCGGY	1 cut(s)	70
BssECI	CCNNGG	2 cut(s)	383, 1284
BssMI	GATC	8 cut(s)	118, 237, 454, 505, 1192, 1318, 1524, 1606
BssSI	CACGAG	1 cut(s)	410
BssT1I	CCWWGG	2 cut(s)	383, 1284
Bst2BI	CACGAG	1 cut(s)	410
Bst4CI	ACNGT	5 cut(s)	190, 352, 664, 1163, 1568
Bst6I	CTCTTC	4 cut(s)	102, 228, 1047, 1067
BstC8I	GCNNGC	5 cut(s)	39, 72, 165, 971, 1392
BstDSI	CCRYGG	1 cut(s)	383
BstF5I	GGATG	8 cut(s)	334, 781, 1195, 1267, 1282, 1294, 1546, 1592
BstFNI	CGCG	1 cut(s)	27
BstKTI	GATC	8 cut(s)	121, 240, 457, 508, 1195, 1321, 1527, 1609
BstMAI	GTCTC	4 cut(s)	585, 1110, 1477, 1565
BstMBI	GATC	8 cut(s)	118, 237, 454, 505, 1192, 1318, 1524, 1606
BstMCI	CGRYCG	1 cut(s)	71
BstMWI	GCNNNNNNNGC	5 cut(s)	38, 137, 160, 845, 907
BstNSI	RCATGY	1 cut(s)	1237
BstPAI	GACNNNNGTC	1 cut(s)	47
BstSCI	CCNGG	1 cut(s)	1002
BstUI	CGCG	1 cut(s)	27
BstV1I	GCAGC	3 cut(s)	802, 922, 1234
BstV2I	GAAGAC	2 cut(s)	87, 683
BstX2I	RGATCY	1 cut(s)	118
BstXI	CCANNNNNNTGG	1 cut(s)	28
BstYI	RGATCY	1 cut(s)	118
BstZI	CGGCCG	1 cut(s)	68
BsuRI	GGCC	4 cut(s)	70, 382, 973, 1390
BtgI	CCRYGG	1 cut(s)	383
BtgZI	GCGATG	1 cut(s)	169
BtsCI	GGATG	8 cut(s)	334, 781, 1195, 1267, 1282, 1294, 1546, 1592
BtsI	GCAGTG	1 cut(s)	525
BtsIMutI	CAGTG	8 cut(s)	207, 525, 734, 1168, 1221, 1330, 1573, 1627
Cac8I	GCNNGC	5 cut(s)	39, 72, 165, 971, 1392
CciI	TCATGA	1 cut(s)	1012
Cfr10I	RCCGGY	1 cut(s)	70
Cfr13I	GGNCC	1 cut(s)	18
Csp6I	GTAC	1 cut(s)	1413
CviAII	CATG	6 cut(s)	342, 384, 1013, 1234, 1559, 1583
CviQI	GTAC	1 cut(s)	1413
DpnI	GATC	8 cut(s)	120, 239, 456, 507, 1194, 1320, 1526, 1608
DpnII	GATC	8 cut(s)	118, 237, 454, 505, 1192, 1318, 1524, 1606
DraI	TTTAAA	1 cut(s)	297
DraIII	CACNNNGTG	1 cut(s)	491
EaeI	YGGCCR	3 cut(s)	68, 380, 1388
EagI	CGGCCG	1 cut(s)	68
Eam1104I	CTCTTC	4 cut(s)	102, 228, 1047, 1067
EarI	CTCTTC	4 cut(s)	102, 228, 1047, 1067
EciI	GGCGGA	1 cut(s)	89
EclXI	CGGCCG	1 cut(s)	68
Eco130I	CCWWGG	2 cut(s)	383, 1284
Eco147I	AGGCCT	1 cut(s)	973
Eco31I	GGTCTC	1 cut(s)	1565
Eco47I	GGWCC	1 cut(s)	18
Eco52I	CGGCCG	1 cut(s)	68
Eco57I	CTGAAG	1 cut(s)	845
Eco88I	CYCGRG	1 cut(s)	752
EcoT14I	CCWWGG	2 cut(s)	383, 1284
EcoT22I	ATGCAT	1 cut(s)	343
ErhI	CCWWGG	2 cut(s)	383, 1284
Esp3I	CGTCTC	1 cut(s)	585
FaeI	CATG	6 cut(s)	345, 387, 1016, 1237, 1562, 1586
FaqI	GGGAC	1 cut(s)	1569
FatI	CATG	6 cut(s)	341, 383, 1012, 1233, 1558, 1582
FbaI	TGATCA	1 cut(s)	1192
Fnu4HI	GCNGC	5 cut(s)	25, 68, 816, 911, 1248
FokI	GGATG	8 cut(s)	341, 788, 1202, 1274, 1289, 1301, 1553, 1579
Fsp4HI	GCNGC	5 cut(s)	25, 68, 816, 911, 1248
FspBI	CTAG	6 cut(s)	164, 740, 1215, 1421, 1434, 1630
GluI	GCNGC	5 cut(s)	25, 68, 816, 911, 1248
GsaI	CCCAGC	1 cut(s)	9
GsuI	CTGGAG	1 cut(s)	1429
HaeIII	GGCC	4 cut(s)	70, 382, 973, 1390
HapII	CCGG	4 cut(s)	54, 71, 1003, 1610
Hin1II	CATG	6 cut(s)	345, 387, 1016, 1237, 1562, 1586
HincII	GTYRAC	1 cut(s)	979
HindII	GTYRAC	1 cut(s)	979
HindIII	AAGCTT	1 cut(s)	212
HinfI	GANTC	9 cut(s)	266, 403, 671, 916, 1133, 1151, 1199, 1514, 1532
HpaII	CCGG	4 cut(s)	54, 71, 1003, 1610
HphI	GGTGA	2 cut(s)	358, 1328
Hpy166II	GTNNAC	3 cut(s)	470, 494, 979
Hpy188III	TCNNGA	8 cut(s)	241, 509, 752, 851, 1013, 1196, 1482, 1610
Hpy8I	GTNNAC	3 cut(s)	470, 494, 979
Hpy99I	CGWCG	1 cut(s)	46
HpyAV	CCTTC	2 cut(s)	760, 1180
HpyCH4III	ACNGT	5 cut(s)	190, 352, 664, 1163, 1568
HpyCH4IV	ACGT	4 cut(s)	84, 439, 808, 952
HpyCH4V	TGCA	5 cut(s)	341, 518, 800, 1063, 1500
HpyF10VI	GCNNNNNNNGC	5 cut(s)	38, 137, 160, 845, 907
HpySE526I	ACGT	4 cut(s)	84, 439, 808, 952
Hsp92II	CATG	6 cut(s)	345, 387, 1016, 1237, 1562, 1586
Kpn2I	TCCGGA	1 cut(s)	1609
KroI	GCCGGC	1 cut(s)	70
KroNI	GCCGGC	1 cut(s)	72
Ksp22I	TGATCA	1 cut(s)	1192
Kzo9I	GATC	8 cut(s)	118, 237, 454, 505, 1192, 1318, 1524, 1606
LmnI	GCTCC	1 cut(s)	160
Lsp1109I	GCAGC	3 cut(s)	802, 922, 1234
LweI	GCATC	6 cut(s)	328, 505, 526, 826, 1093, 1234
MaeI	CTAG	6 cut(s)	164, 740, 1215, 1421, 1434, 1630
MaeII	ACGT	4 cut(s)	84, 439, 808, 952
MaeIII	GTNAC	7 cut(s)	346, 370, 658, 1027, 1205, 1217, 1325
MalI	GATC	8 cut(s)	120, 239, 456, 507, 1194, 1320, 1526, 1608
MboI	GATC	8 cut(s)	118, 237, 454, 505, 1192, 1318, 1524, 1606
MfeI	CAATTG	1 cut(s)	1270
MflI	RGATCY	1 cut(s)	118
MlsI	TGGCCA	2 cut(s)	382, 1390
MluCI	AATT	8 cut(s)	558, 758, 928, 945, 1123, 1270, 1336, 1374
MluNI	TGGCCA	2 cut(s)	382, 1390
MlyI	GAGTC	2 cut(s)	1508, 1526
MmeI	TCCRAC	1 cut(s)	482
Mox20I	TGGCCA	2 cut(s)	382, 1390
Mph1103I	ATGCAT	1 cut(s)	343
MroI	TCCGGA	1 cut(s)	1609
MroNI	GCCGGC	1 cut(s)	70
MscI	TGGCCA	2 cut(s)	382, 1390
MseI	TTAA	4 cut(s)	296, 479, 531, 923
Msp20I	TGGCCA	2 cut(s)	382, 1390
MspA1I	CMGCKG	2 cut(s)	230, 1407
MspI	CCGG	4 cut(s)	54, 71, 1003, 1610
MspR9I	CCNGG	1 cut(s)	1004
MunI	CAATTG	1 cut(s)	1270
MvnI	CGCG	1 cut(s)	27
MwoI	GCNNNNNNNGC	5 cut(s)	38, 137, 160, 845, 907
NaeI	GCCGGC	1 cut(s)	72
NciI	CCSGG	1 cut(s)	1004
NcoI	CCATGG	1 cut(s)	383
NdeII	GATC	8 cut(s)	118, 237, 454, 505, 1192, 1318, 1524, 1606
NgoMIV	GCCGGC	1 cut(s)	70
NheI	GCTAGC	1 cut(s)	163
NlaIII	CATG	6 cut(s)	345, 387, 1016, 1237, 1562, 1586
NlaIV	GGNNCC	2 cut(s)	120, 1282
NmuCI	GTSAC	2 cut(s)	346, 1325
NsiI	ATGCAT	1 cut(s)	343
NspI	RCATGY	1 cut(s)	1237
PaeR7I	CTCGAG	1 cut(s)	752
PagI	TCATGA	1 cut(s)	1012
PceI	AGGCCT	1 cut(s)	973
PdiI	GCCGGC	1 cut(s)	72
PfeI	GAWTC	7 cut(s)	266, 403, 671, 916, 1133, 1151, 1199
PflFI	GACNNNGTC	1 cut(s)	1004
PflMI	CCANNNNNTGG	2 cut(s)	206, 1397
PkrI	GCNGC	5 cut(s)	26, 69, 817, 912, 1249
PleI	GAGTC	2 cut(s)	1508, 1526
PpsI	GAGTC	2 cut(s)	1508, 1526
PshAI	GACNNNNGTC	1 cut(s)	47
PshBI	ATTAAT	1 cut(s)	531
PsiI	TTATAA	1 cut(s)	444
PspFI	CCCAGC	1 cut(s)	5
PspN4I	GGNNCC	2 cut(s)	120, 1282
PspPI	GGNCC	1 cut(s)	18
PsuI	RGATCY	1 cut(s)	118
PsyI	GACNNNGTC	1 cut(s)	1004
RsaI	GTAC	1 cut(s)	1414
RsaNI	GTAC	1 cut(s)	1413
SaqAI	TTAA	4 cut(s)	296, 479, 531, 923
SatI	GCNGC	5 cut(s)	25, 68, 816, 911, 1248
Sau3AI	GATC	8 cut(s)	118, 237, 454, 505, 1192, 1318, 1524, 1606
Sau96I	GGNCC	1 cut(s)	18
SchI	GAGTC	2 cut(s)	1508, 1526
ScrFI	CCNGG	1 cut(s)	1004
SfaNI	GCATC	6 cut(s)	328, 505, 526, 826, 1093, 1234
Sfr274I	CTCGAG	1 cut(s)	752
SinI	GGWCC	1 cut(s)	18
SlaI	CTCGAG	1 cut(s)	752
SmlI	CTYRAG	2 cut(s)	752, 851
SmoI	CTYRAG	2 cut(s)	752, 851
SpeI	ACTAGT	1 cut(s)	1433
Sse9I	AATT	8 cut(s)	558, 758, 928, 945, 1123, 1270, 1336, 1374
SseBI	AGGCCT	1 cut(s)	973
SsiI	CCGC	8 cut(s)	16, 25, 67, 74, 230, 571, 967, 1405
SspMI	CTAG	6 cut(s)	164, 740, 1215, 1421, 1434, 1630
StuI	AGGCCT	1 cut(s)	973
StyD4I	CCNGG	1 cut(s)	1002
StyI	CCWWGG	2 cut(s)	383, 1284
TaaI	ACNGT	5 cut(s)	190, 352, 664, 1163, 1568
TaiI	ACGT	4 cut(s)	87, 442, 811, 955
TaqI	TCGA	4 cut(s)	240, 674, 753, 1481
TasI	AATT	8 cut(s)	558, 758, 928, 945, 1123, 1270, 1336, 1374
TatI	WGTACW	1 cut(s)	1412
TauI	GCSGC	2 cut(s)	27, 70
TfiI	GAWTC	7 cut(s)	266, 403, 671, 916, 1133, 1151, 1199
Tru1I	TTAA	4 cut(s)	296, 479, 531, 923
Tru9I	TTAA	4 cut(s)	296, 479, 531, 923
TscAI	CASTG	8 cut(s)	207, 525, 734, 1168, 1228, 1330, 1573, 1627
TseFI	GTSAC	2 cut(s)	346, 1325
TseI	GCWGC	3 cut(s)	815, 910, 1247
Tsp45I	GTSAC	2 cut(s)	346, 1325
TspDTI	ATGAA	7 cut(s)	555, 792, 1001, 1317, 1557, 1575, 1599
TspGWI	ACGGA	2 cut(s)	59, 160
TspRI	CASTG	8 cut(s)	207, 525, 734, 1168, 1228, 1330, 1573, 1627
Tth111I	GACNNNGTC	1 cut(s)	1004
Van91I	CCANNNNNTGG	2 cut(s)	206, 1397
VpaK11BI	GGWCC	1 cut(s)	18
VspI	ATTAAT	1 cut(s)	531
XapI	RAATTY	5 cut(s)	558, 758, 928, 1123, 1374
XceI	RCATGY	1 cut(s)	1237
XhoI	CTCGAG	1 cut(s)	752
XspI	CTAG	6 cut(s)	164, 740, 1215, 1421, 1434, 1630
Zsp2I	ATGCAT	1 cut(s)	343

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.