phosphatidylinositol-3-phosphate binding
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G25730 AT2G25730 AT2G25730 AT2G25730 |
| fragaria_vesca | FvH4_2g30330 FvH4_2g30330 FvH4_2g30330 FvH4_2g30330 FvH4_2g30330 FvH4_2g30330 FvH4_2g30330 |
| malus_domestica | MD15G1113500.v1.1 |
| prunus_persica | Prupe.1G464500_v2.0.a1 Prupe.1G464500_v2.0.a1 Prupe.5G112400_v2.0.a1 |
| pyrus_communis | pycom15g10180 |
| rosa_chinensis | RchiOBHm_Chr6g0312581 |
| rosa_laevigata | RLG00000010315 |
| rosa_multiflora | Rmu_sc0003094.1_g000005 Rmu_sc0008363.1_g000004 |
| rosa_roxburghii | Rroxscaffold_7G00156680 |
| rosa_rugosa | Rorug06G0396500 Rorug06G0396600 |
| rosa_samantha | Rh6AG514400 Rh6BG525500 Rh6CG530700 Rh6DG516500 |
| rosa_wichuraiana | Rw6G044700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 1254, 4440 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1273 |
| Acc36I | ACCTGC | 5 cut(s) | 1254, 1423, 1926, 3852, 4440 |
| AccB1I | GGYRCC | 1 cut(s) | 3751 |
| AccB7I | CCANNNNNTGG | 4 cut(s) | 1362, 2739, 2890, 3467 |
| AccBSI | CCGCTC | 2 cut(s) | 409, 1682 |
| AccI | GTMKAC | 1 cut(s) | 6747 |
| AccII | CGCG | 7 cut(s) | 99, 291, 841, 3577, 4634, 4755, 6081 |
| AcoI | YGGCCR | 7 cut(s) | 36, 58, 699, 3469, 5644, 5982, 6466 |
| AcsI | RAATTY | 5 cut(s) | 1098, 1573, 1727, 5039, 6886 |
| AdeI | CACNNNGTG | 1 cut(s) | 4419 |
| AfeI | AGCGCT | 1 cut(s) | 6912 |
| AflIII | ACRYGT | 5 cut(s) | 1212, 2063, 2093, 2905, 5993 |
| AgeI | ACCGGT | 1 cut(s) | 3765 |
| AhlI | ACTAGT | 3 cut(s) | 541, 3149, 4310 |
| AjiI | CACGTC | 1 cut(s) | 5861 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 569, 601 |
| Alw44I | GTGCAC | 3 cut(s) | 2426, 5175, 6219 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1414, 4268 |
| Ama87I | CYCGRG | 1 cut(s) | 7023 |
| Aor51HI | AGCGCT | 1 cut(s) | 6912 |
| ApaLI | GTGCAC | 3 cut(s) | 2426, 5175, 6219 |
| ApoI | RAATTY | 5 cut(s) | 1098, 1573, 1727, 5039, 6886 |
| AseI | ATTAAT | 1 cut(s) | 1403 |
| AsiGI | ACCGGT | 1 cut(s) | 3765 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 1119, 2907, 5305, 5403, 5466 |
| AspLEI | GCGC | 9 cut(s) | 101, 291, 293, 3579, 4634, 4755, 5068, 6641, 6913 |
| AsuC2I | CCSGG | 2 cut(s) | 197, 3365 |
| AsuII | TTCGAA | 1 cut(s) | 402 |
| AsuNHI | GCTAGC | 1 cut(s) | 1307 |
| AvaI | CYCGRG | 1 cut(s) | 7023 |
| AxyI | CCTNAGG | 1 cut(s) | 4566 |
| BaeGI | GKGCMC | 3 cut(s) | 2430, 5179, 6223 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 6916, 6949 |
| BalI | TGGCCA | 3 cut(s) | 701, 3471, 6468 |
| BanI | GGYRCC | 1 cut(s) | 3751 |
| BanII | GRGCYC | 6 cut(s) | 72, 231, 2732, 3021, 3728, 5251 |
| BauI | CACGAG | 2 cut(s) | 1227, 2526 |
| BbsI | GAAGAC | 5 cut(s) | 1328, 2153, 2227, 2506, 5181 |
| BbvCI | CCTCAGC | 1 cut(s) | 6525 |
| BceAI | ACGGC | 6 cut(s) | 110, 1457, 1826, 5417, 5450, 5969 |
| BciVI | GTATCC | 1 cut(s) | 3819 |
| BclI | TGATCA | 5 cut(s) | 556, 2002, 2185, 3790, 4516 |
| BcnI | CCSGG | 2 cut(s) | 197, 3365 |
| BcuI | ACTAGT | 3 cut(s) | 541, 3149, 4310 |
| BfmI | CTRYAG | 9 cut(s) | 977, 1386, 1919, 2445, 2550, 3746, 4664, 4695, 6723 |
| BfoI | RGCGCY | 1 cut(s) | 6914 |
| BfuAI | ACCTGC | 5 cut(s) | 1254, 1423, 1926, 3852, 4440 |
| BfuI | GTATCC | 1 cut(s) | 3819 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2837 |
| BglII | AGATCT | 2 cut(s) | 904, 1079 |
| BlpI | GCTNAGC | 2 cut(s) | 3558, 5865 |
| BmeT110I | CYCGRG | 1 cut(s) | 7023 |
| BmgBI | CACGTC | 1 cut(s) | 5861 |
| BmiI | GGNNCC | 9 cut(s) | 179, 2731, 3753, 3806, 4256, 5250, 6021, 6601, 7075 |
| BmrI | ACTGGG | 5 cut(s) | 1630, 2749, 2900, 3107, 3647 |
| BmtI | GCTAGC | 1 cut(s) | 1311 |
| BmuI | ACTGGG | 5 cut(s) | 1630, 2749, 2900, 3107, 3647 |
| BoxI | GACNNNNGTC | 1 cut(s) | 140 |
| BpiI | GAAGAC | 5 cut(s) | 1328, 2153, 2227, 2506, 5181 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 69, 101, 1040, 1072 |
| BpmI | CTGGAG | 2 cut(s) | 116, 2811 |
| Bpu10I | CCTNAGC | 1 cut(s) | 6525 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 3558, 5865 |
| Bpu14I | TTCGAA | 1 cut(s) | 402 |
| BpuEI | CTTGAG | 8 cut(s) | 616, 896, 2162, 2667, 2774, 4352, 5006, 6158 |
| BpuMI | CCSGG | 2 cut(s) | 197, 3365 |
| Bsa29I | ATCGAT | 1 cut(s) | 324 |
| BsaAI | YACGTR | 2 cut(s) | 2357, 2736 |
| BsaBI | GATNNNNATC | 4 cut(s) | 1092, 1964, 2861, 6258 |
| BsaWI | WCCGGW | 3 cut(s) | 152, 3490, 3765 |
| Bse118I | RCCGGY | 2 cut(s) | 3765, 4671 |
| Bse21I | CCTNAGG | 1 cut(s) | 4566 |
| Bse3DI | GCAATG | 6 cut(s) | 891, 3252, 4210, 4748, 4931, 6648 |
| Bse8I | GATNNNNATC | 4 cut(s) | 1092, 1964, 2861, 6258 |
| BseCI | ATCGAT | 1 cut(s) | 324 |
| BseJI | GATNNNNATC | 4 cut(s) | 1092, 1964, 2861, 6258 |
| BseMI | GCAATG | 6 cut(s) | 891, 3252, 4210, 4748, 4931, 6648 |
| BsePI | GCGCGC | 1 cut(s) | 289 |
| BseSI | GKGCMC | 3 cut(s) | 2430, 5179, 6223 |
| BseYI | CCCAGC | 2 cut(s) | 1444, 2661 |
| BsgI | GTGCAG | 6 cut(s) | 1011, 2346, 3176, 3429, 4441, 4530 |
| Bsh1236I | CGCG | 7 cut(s) | 99, 291, 841, 3577, 4634, 4755, 6081 |
| Bsh1285I | CGRYCG | 2 cut(s) | 157, 4192 |
| BshNI | GGYRCC | 1 cut(s) | 3751 |
| BshTI | ACCGGT | 1 cut(s) | 3765 |
| BshVI | ATCGAT | 1 cut(s) | 324 |
| BsiEI | CGRYCG | 2 cut(s) | 157, 4192 |
| BsiHKCI | CYCGRG | 1 cut(s) | 7023 |
| BsiSI | CCGG | 7 cut(s) | 153, 197, 527, 3364, 3491, 3766, 4672 |
| BslFI | GGGAC | 7 cut(s) | 163, 2644, 2907, 3523, 5158, 6054, 6613 |
| BsmBI | CGTCTC | 2 cut(s) | 2306, 5660 |
| BsmFI | GGGAC | 7 cut(s) | 163, 2644, 2907, 3523, 5158, 6054, 6613 |
| BsmI | GAATGC | 2 cut(s) | 5629, 6037 |
| BsoBI | CYCGRG | 1 cut(s) | 7023 |
| Bsp119I | TTCGAA | 1 cut(s) | 402 |
| Bsp1407I | TGTACA | 5 cut(s) | 649, 3696, 4138, 5674, 6108 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 3558, 5865 |
| Bsp19I | CCATGG | 5 cut(s) | 1356, 3472, 4782, 4937, 5346 |
| BspDI | ATCGAT | 1 cut(s) | 324 |
| BspFNI | CGCG | 7 cut(s) | 99, 291, 841, 3577, 4634, 4755, 6081 |
| BspHI | TCATGA | 2 cut(s) | 1962, 3295 |
| BspLI | GGNNCC | 9 cut(s) | 179, 2731, 3753, 3806, 4256, 5250, 6021, 6601, 7075 |
| BspMAI | CTGCAG | 7 cut(s) | 981, 1390, 1923, 2449, 4668, 4699, 6727 |
| BspMI | ACCTGC | 5 cut(s) | 1254, 1423, 1926, 3852, 4440 |
| BspOI | GCTAGC | 1 cut(s) | 1311 |
| BspQI | GCTCTTC | 3 cut(s) | 399, 3586, 6105 |
| BspT104I | TTCGAA | 1 cut(s) | 402 |
| BspT107I | GGYRCC | 1 cut(s) | 3751 |
| BsrBI | CCGCTC | 2 cut(s) | 409, 1682 |
| BsrDI | GCAATG | 6 cut(s) | 891, 3252, 4210, 4748, 4931, 6648 |
| BsrFI | RCCGGY | 2 cut(s) | 3765, 4671 |
| BsrGI | TGTACA | 5 cut(s) | 649, 3696, 4138, 5674, 6108 |
| BssAI | RCCGGY | 2 cut(s) | 3765, 4671 |
| BssHII | GCGCGC | 1 cut(s) | 289 |
| BssSI | CACGAG | 2 cut(s) | 1227, 2526 |
| BssT1I | CCWWGG | 9 cut(s) | 1356, 3333, 3472, 3729, 4021, 4782, 4902, 4937, 5346 |
| Bst2BI | CACGAG | 2 cut(s) | 1227, 2526 |
| BstAPI | GCANNNNNTGC | 7 cut(s) | 998, 2648, 3920, 5561, 5657, 6442, 6731 |
| BstAUI | TGTACA | 5 cut(s) | 649, 3696, 4138, 5674, 6108 |
| BstBAI | YACGTR | 2 cut(s) | 2357, 2736 |
| BstBI | TTCGAA | 1 cut(s) | 402 |
| BstDSI | CCRYGG | 5 cut(s) | 1356, 3472, 4782, 4937, 5346 |
| BstEII | GGTNACC | 1 cut(s) | 5288 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1789 |
| BstFNI | CGCG | 7 cut(s) | 99, 291, 841, 3577, 4634, 4755, 6081 |
| BstH2I | RGCGCY | 1 cut(s) | 6914 |
| BstHHI | GCGC | 9 cut(s) | 101, 291, 293, 3579, 4634, 4755, 5068, 6641, 6913 |
| BstMCI | CGRYCG | 2 cut(s) | 157, 4192 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 140 |
| BstPI | GGTNACC | 1 cut(s) | 5288 |
| BstSFI | CTRYAG | 9 cut(s) | 977, 1386, 1919, 2445, 2550, 3746, 4664, 4695, 6723 |
| BstSLI | GKGCMC | 3 cut(s) | 2430, 5179, 6223 |
| BstUI | CGCG | 7 cut(s) | 99, 291, 841, 3577, 4634, 4755, 6081 |
| BstV2I | GAAGAC | 5 cut(s) | 1328, 2153, 2227, 2506, 5181 |
| BstX2I | RGATCY | 8 cut(s) | 904, 1079, 3337, 4561, 4699, 6305, 6577, 7052 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 4938 |
| BstYI | RGATCY | 8 cut(s) | 904, 1079, 3337, 4561, 4699, 6305, 6577, 7052 |
| Bsu15I | ATCGAT | 1 cut(s) | 324 |
| Bsu36I | CCTNAGG | 1 cut(s) | 4566 |
| BsuI | GTATCC | 1 cut(s) | 3819 |
| BsuTUI | ATCGAT | 1 cut(s) | 324 |
| BtgI | CCRYGG | 5 cut(s) | 1356, 3472, 4782, 4937, 5346 |
| BtgZI | GCGATG | 2 cut(s) | 73, 4805 |
| BtrI | CACGTC | 1 cut(s) | 5861 |
| BtsI | GCAGTG | 5 cut(s) | 2235, 2430, 5519, 5731, 6711 |
| BveI | ACCTGC | 5 cut(s) | 1254, 1423, 1926, 3852, 4440 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1414, 4268 |
| CciI | TCATGA | 2 cut(s) | 1962, 3295 |
| CfoI | GCGC | 9 cut(s) | 101, 291, 293, 3579, 4634, 4755, 5068, 6641, 6913 |
| Cfr10I | RCCGGY | 2 cut(s) | 3765, 4671 |
| ClaI | ATCGAT | 1 cut(s) | 324 |
| CpoI | CGGWCCG | 1 cut(s) | 2179 |
| CseI | GACGC | 4 cut(s) | 254, 2288, 4091, 6488 |
| CspAI | ACCGGT | 1 cut(s) | 3765 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2979, 3014 |
| CspI | CGGWCCG | 1 cut(s) | 2179 |
| DraI | TTTAAA | 2 cut(s) | 1911, 3816 |
| DraIII | CACNNNGTG | 1 cut(s) | 4419 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1273 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1273 |
| EaeI | YGGCCR | 7 cut(s) | 36, 58, 699, 3469, 5644, 5982, 6466 |
| EciI | GGCGGA | 4 cut(s) | 244, 428, 1092, 6156 |
| Ecl136II | GAGCTC | 3 cut(s) | 229, 3019, 3726 |
| Eco130I | CCWWGG | 9 cut(s) | 1356, 3333, 3472, 3729, 4021, 4782, 4902, 4937, 5346 |
| Eco24I | GRGCYC | 6 cut(s) | 72, 231, 2732, 3021, 3728, 5251 |
| Eco32I | GATATC | 2 cut(s) | 1130, 1485 |
| Eco47III | AGCGCT | 1 cut(s) | 6912 |
| Eco53kI | GAGCTC | 3 cut(s) | 229, 3019, 3726 |
| Eco81I | CCTNAGG | 1 cut(s) | 4566 |
| Eco88I | CYCGRG | 1 cut(s) | 7023 |
| Eco91I | GGTNACC | 1 cut(s) | 5288 |
| EcoICRI | GAGCTC | 3 cut(s) | 229, 3019, 3726 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1789 |
| EcoO109I | RGGNCCY | 2 cut(s) | 2594, 3041 |
| EcoO65I | GGTNACC | 1 cut(s) | 5288 |
| EcoRI | GAATTC | 1 cut(s) | 1573 |
| EcoRV | GATATC | 2 cut(s) | 1130, 1485 |
| EcoT14I | CCWWGG | 9 cut(s) | 1356, 3333, 3472, 3729, 4021, 4782, 4902, 4937, 5346 |
| EcoT22I | ATGCAT | 5 cut(s) | 4380, 5629, 5773, 6037, 6648 |
| EcoT38I | GRGCYC | 6 cut(s) | 72, 231, 2732, 3021, 3728, 5251 |
| ErhI | CCWWGG | 9 cut(s) | 1356, 3333, 3472, 3729, 4021, 4782, 4902, 4937, 5346 |
| Esp3I | CGTCTC | 2 cut(s) | 2306, 5660 |
| FaqI | GGGAC | 7 cut(s) | 163, 2644, 2907, 3523, 5158, 6054, 6613 |
| FauI | CCCGC | 5 cut(s) | 38, 118, 402, 1961, 4627 |
| FauNDI | CATATG | 2 cut(s) | 1995, 2928 |
| FbaI | TGATCA | 5 cut(s) | 556, 2002, 2185, 3790, 4516 |
| FblI | GTMKAC | 1 cut(s) | 6747 |
| FriOI | GRGCYC | 6 cut(s) | 72, 231, 2732, 3021, 3728, 5251 |
| GlaI | GCGC | 9 cut(s) | 100, 290, 292, 3578, 4633, 4754, 5067, 6640, 6912 |
| GsaI | CCCAGC | 2 cut(s) | 1448, 2665 |
| GsuI | CTGGAG | 2 cut(s) | 116, 2811 |
| HaeII | RGCGCY | 1 cut(s) | 6914 |
| HapII | CCGG | 7 cut(s) | 153, 197, 527, 3364, 3491, 3766, 4672 |
| HgaI | GACGC | 4 cut(s) | 254, 2288, 4091, 6488 |
| HhaI | GCGC | 9 cut(s) | 101, 291, 293, 3579, 4634, 4755, 5068, 6641, 6913 |
| Hin6I | GCGC | 9 cut(s) | 99, 289, 291, 3577, 4632, 4753, 5066, 6639, 6911 |
| HinP1I | GCGC | 9 cut(s) | 99, 289, 291, 3577, 4632, 4753, 5066, 6639, 6911 |
| HincII | GTYRAC | 3 cut(s) | 3052, 3763, 6412 |
| HindII | GTYRAC | 3 cut(s) | 3052, 3763, 6412 |
| HindIII | AAGCTT | 5 cut(s) | 4479, 4685, 4728, 5711, 6947 |
| HpaII | CCGG | 7 cut(s) | 153, 197, 527, 3364, 3491, 3766, 4672 |
| Hpy99I | CGWCG | 3 cut(s) | 227, 245, 248 |
| HpyCH4IV | ACGT | 9 cut(s) | 2320, 2356, 2735, 2905, 3975, 4407, 5669, 5860, 7133 |
| HpySE526I | ACGT | 9 cut(s) | 2320, 2356, 2735, 2905, 3975, 4407, 5669, 5860, 7133 |
| HspAI | GCGC | 9 cut(s) | 99, 289, 291, 3577, 4632, 4753, 5066, 6639, 6911 |
| KroI | GCCGGC | 1 cut(s) | 4671 |
| KroNI | GCCGGC | 1 cut(s) | 4673 |
| Ksp22I | TGATCA | 5 cut(s) | 556, 2002, 2185, 3790, 4516 |
| LguI | GCTCTTC | 3 cut(s) | 399, 3586, 6105 |
| MaeII | ACGT | 9 cut(s) | 2320, 2356, 2735, 2905, 3975, 4407, 5669, 5860, 7133 |
| MbiI | CCGCTC | 2 cut(s) | 409, 1682 |
| MfeI | CAATTG | 6 cut(s) | 1764, 2247, 3138, 3261, 5612, 6153 |
| MflI | RGATCY | 8 cut(s) | 904, 1079, 3337, 4561, 4699, 6305, 6577, 7052 |
| MlsI | TGGCCA | 3 cut(s) | 701, 3471, 6468 |
| MluNI | TGGCCA | 3 cut(s) | 701, 3471, 6468 |
| MlyI | GAGTC | 6 cut(s) | 523, 2873, 3968, 4751, 5939, 7106 |
| MmeI | TCCRAC | 4 cut(s) | 480, 623, 6378, 6859 |
| Mox20I | TGGCCA | 3 cut(s) | 701, 3471, 6468 |
| Mph1103I | ATGCAT | 5 cut(s) | 4380, 5629, 5773, 6037, 6648 |
| MroNI | GCCGGC | 1 cut(s) | 4671 |
| MroXI | GAANNNNTTC | 5 cut(s) | 1119, 2907, 5305, 5403, 5466 |
| MscI | TGGCCA | 3 cut(s) | 701, 3471, 6468 |
| MslI | CAYNNNNRTG | 8 cut(s) | 707, 789, 1967, 1998, 4936, 5484, 6474, 6903 |
| Msp20I | TGGCCA | 3 cut(s) | 701, 3471, 6468 |
| MspA1I | CMGCKG | 8 cut(s) | 1411, 1880, 3383, 4425, 4530, 6106, 6185, 6722 |
| MspI | CCGG | 7 cut(s) | 153, 197, 527, 3364, 3491, 3766, 4672 |
| MunI | CAATTG | 6 cut(s) | 1764, 2247, 3138, 3261, 5612, 6153 |
| Mva1269I | GAATGC | 2 cut(s) | 5629, 6037 |
| MvnI | CGCG | 7 cut(s) | 99, 291, 841, 3577, 4634, 4755, 6081 |
| NaeI | GCCGGC | 1 cut(s) | 4673 |
| NciI | CCSGG | 2 cut(s) | 197, 3365 |
| NcoI | CCATGG | 5 cut(s) | 1356, 3472, 4782, 4937, 5346 |
| NdeI | CATATG | 2 cut(s) | 1995, 2928 |
| NgoMIV | GCCGGC | 1 cut(s) | 4671 |
| NheI | GCTAGC | 1 cut(s) | 1307 |
| NlaIV | GGNNCC | 9 cut(s) | 179, 2731, 3753, 3806, 4256, 5250, 6021, 6601, 7075 |
| NmeAIII | GCCGAG | 4 cut(s) | 36, 319, 4864, 5672 |
| NmuCI | GTSAC | 3 cut(s) | 3266, 4442, 6952 |
| NsiI | ATGCAT | 5 cut(s) | 4380, 5629, 5773, 6037, 6648 |
| NspV | TTCGAA | 1 cut(s) | 402 |
| PaeI | GCATGC | 2 cut(s) | 1759, 2392 |
| PagI | TCATGA | 2 cut(s) | 1962, 3295 |
| PaqCI | CACCTGC | 2 cut(s) | 1254, 4440 |
| PauI | GCGCGC | 1 cut(s) | 289 |
| PciI | ACATGT | 4 cut(s) | 1212, 2063, 2093, 5993 |
| PciSI | GCTCTTC | 3 cut(s) | 399, 3586, 6105 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 63, 123 |
| PctI | GAATGC | 2 cut(s) | 5629, 6037 |
| PdiI | GCCGGC | 1 cut(s) | 4673 |
| PdmI | GAANNNNTTC | 5 cut(s) | 1119, 2907, 5305, 5403, 5466 |
| PflFI | GACNNNGTC | 2 cut(s) | 1594, 6809 |
| PflMI | CCANNNNNTGG | 4 cut(s) | 1362, 2739, 2890, 3467 |
| PfoI | TCCNGGA | 2 cut(s) | 2707, 5358 |
| PinAI | ACCGGT | 1 cut(s) | 3765 |
| Ple19I | CGATCG | 1 cut(s) | 4192 |
| PleI | GAGTC | 6 cut(s) | 522, 2873, 3967, 4751, 5938, 7106 |
| PpsI | GAGTC | 6 cut(s) | 522, 2873, 3967, 4751, 5938, 7106 |
| Ppu21I | YACGTR | 2 cut(s) | 2357, 2736 |
| PpuMI | RGGWCCY | 1 cut(s) | 2594 |
| PscI | ACATGT | 4 cut(s) | 1212, 2063, 2093, 5993 |
| PshAI | GACNNNNGTC | 1 cut(s) | 140 |
| PshBI | ATTAAT | 1 cut(s) | 1403 |
| Psp124BI | GAGCTC | 3 cut(s) | 231, 3021, 3728 |
| Psp5II | RGGWCCY | 1 cut(s) | 2594 |
| PspEI | GGTNACC | 1 cut(s) | 5288 |
| PspFI | CCCAGC | 2 cut(s) | 1444, 2661 |
| PspN4I | GGNNCC | 9 cut(s) | 179, 2731, 3753, 3806, 4256, 5250, 6021, 6601, 7075 |
| PspPPI | RGGWCCY | 1 cut(s) | 2594 |
| PstI | CTGCAG | 7 cut(s) | 981, 1390, 1923, 2449, 4668, 4699, 6727 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1414, 4268 |
| PsuI | RGATCY | 8 cut(s) | 904, 1079, 3337, 4561, 4699, 6305, 6577, 7052 |
| PsyI | GACNNNGTC | 2 cut(s) | 1594, 6809 |
| PteI | GCGCGC | 1 cut(s) | 289 |
| PvuI | CGATCG | 1 cut(s) | 4192 |
| PvuII | CAGCTG | 7 cut(s) | 1411, 3383, 4425, 4530, 6106, 6185, 6722 |
| RseI | CAYNNNNRTG | 8 cut(s) | 707, 789, 1967, 1998, 4936, 5484, 6474, 6903 |
| Rsr2I | CGGWCCG | 1 cut(s) | 2179 |
| RsrII | CGGWCCG | 1 cut(s) | 2179 |
| SacI | GAGCTC | 3 cut(s) | 231, 3021, 3728 |
| SapI | GCTCTTC | 3 cut(s) | 399, 3586, 6105 |
| SchI | GAGTC | 6 cut(s) | 523, 2873, 3968, 4751, 5939, 7106 |
| SfcI | CTRYAG | 9 cut(s) | 977, 1386, 1919, 2445, 2550, 3746, 4664, 4695, 6723 |
| SfuI | TTCGAA | 1 cut(s) | 402 |
| SmiMI | CAYNNNNRTG | 8 cut(s) | 707, 789, 1967, 1998, 4936, 5484, 6474, 6903 |
| SmlI | CTYRAG | 8 cut(s) | 595, 911, 2141, 2682, 2789, 4367, 4985, 6137 |
| SmoI | CTYRAG | 8 cut(s) | 595, 911, 2141, 2682, 2789, 4367, 4985, 6137 |
| SpeI | ACTAGT | 3 cut(s) | 541, 3149, 4310 |
| SphI | GCATGC | 2 cut(s) | 1759, 2392 |
| SspI | AATATT | 2 cut(s) | 972, 1315 |
| SstI | GAGCTC | 3 cut(s) | 231, 3021, 3728 |
| StyI | CCWWGG | 9 cut(s) | 1356, 3333, 3472, 3729, 4021, 4782, 4902, 4937, 5346 |
| TaiI | ACGT | 9 cut(s) | 2323, 2359, 2738, 2908, 3978, 4410, 5672, 5863, 7136 |
| TatI | WGTACW | 7 cut(s) | 649, 2554, 3696, 4138, 5596, 5674, 6108 |
| TauI | GCSGC | 4 cut(s) | 41, 1355, 2959, 5724 |
| TseFI | GTSAC | 3 cut(s) | 3266, 4442, 6952 |
| Tsp45I | GTSAC | 3 cut(s) | 3266, 4442, 6952 |
| Tth111I | GACNNNGTC | 2 cut(s) | 1594, 6809 |
| Van91I | CCANNNNNTGG | 4 cut(s) | 1362, 2739, 2890, 3467 |
| VneI | GTGCAC | 3 cut(s) | 2426, 5175, 6219 |
| VspI | ATTAAT | 1 cut(s) | 1403 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1789 |
| XapI | RAATTY | 5 cut(s) | 1098, 1573, 1727, 5039, 6886 |
| XbaI | TCTAGA | 2 cut(s) | 1831, 5908 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 4265, 6815 |
| XmiI | GTMKAC | 1 cut(s) | 6747 |
| XmnI | GAANNNNTTC | 5 cut(s) | 1119, 2907, 5305, 5403, 5466 |
| Zsp2I | ATGCAT | 5 cut(s) | 4380, 5629, 5773, 6037, 6648 |