RchiOBHm_Chr6g0312581

phosphatidylinositol-3-phosphate binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0005768
Physical Location & Seq
Forward (+)
69175270 .. 69196482
21213 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ28120

Sequence Viewer

Length: 7602 bp
ATGGAGGACAAAGAAACCCAAATCCTTTCCCGCCTGGCCGCAAACCACCTCTTCCTCGGCCAATTCGAGCCCCTCCGAGCCATCCTCATCGCTCTCCGCGCCCGAAACCCCGCCCTCGCCCTCGCCGTCCTCCAGACCATAGTCGCCCACTCCGGTCGCTTCGACAATGTTCTATGGTCCCCGTCCTGCCCTTCCCCGGCAATCCTCGCTTACCTCTCCACCGTCGAGCTCTTGCAATTTGACGACGCCTCCTCCGCCTGGGGATTCGATCCCGAAACGCTGCGGTTGCGCGCCGAGTTTCTGCTGCTGGTTCAGAGCTTGATCGATAGGGTTTCGGAGAGCTTGCGGAGGAGTTTCGATTTGGAGAGCATAGAGAAGGAGAAGGAGAAGAGTGATGGTTTCGAAGAGCGGGCGGAGTTGATGGATGATACGATGAGCAAGGAGTTGAGAGACGGCGGTGGTGAATTGGAGAGCTGTGTTAGGGTTTTGGATAGAGTGTTGGAATTGGGGGTGAGTAGGTTGAAGCCGGAATCTTTACTAGTAGGGAATGGTGATCAGGCTGTGGAAATTGAGGAAGGCGAGTTCATGTGCTTGAGGAGTGTGGTGTGGGAGTATGCTGATGTTTTCGATGCCTTGTGTTGGAATGTACAGAGGCAAGTGAGGGGTTGGGAGGGAGATGATGCTTCCGGTTTGGCCATAACTGTGAGGAGGGATGACATGCCGAAAGAGGAGGATGTGAAGGTTCTTCGTTTGATACAGATGAGTGTTCAGTTAGCTCACTTGGATGCTATGAGAGAGTGCATCAAGGATGGTGAAGTGGATGGAGTGGTTTCGCGGATTCGGTTTCTTCACCTTGATTATGGAGTGGAGGAGACTGAGTATCGCATTGCTTTGCAAGATCTCCTCAAGATGGTGTCATCAGGAAAGGAGGGATATGGAGATTCCTGGCAAGACATGCGAGAAATATTACTGCAGATTTATAGTGCAGCTCTTGCTTCAAACTCTGGGCATCTTGTTCAAATGATACAAGTTCTGCAGGATGAGTTGCTCTCGAAAGAGATTGAGATATATAGATCTCTTGATAACAATCAAATTCCGCCACCTCTTGAACGTCTTCAAAGATATCTTGAAGAATTAAGACCTGGCACAGATGTAAATGATAAAACTTCTCCCTTCAATAGTGTAGTTGCATTTTGCATGAGAGACATGTACCATTATGCTCGTGTTTCTGGTTTACACCTGCTTGAATGTGTCATGGAGACAGCTTTGTCTGTGGTGAAGAGGGAGCAGCTTCAGGAAGCTAGCAATATTCTTTTATTGTTCCCCCGTCTTCAGCCCCTAGTAGCTGCCATGGGTTGGGATTTACTGTCTGGCAAAACTGCAGCTCGAAGGAAATTAATGCAACTGCTGTGGAAAACTAAGTCGCAGGTTTTACGGCTGGAAGAATCTTCCCTTTATAGTAACCAGTCAGATGAGATATCTTGCGTGGAATATCTTTGTGATTCTTTATGTTATCAACTAGATCTTGCCTCATTTGTGGCCTGTGTTAATTCTGGTCAATCATGGAATTCAAAATTGTCACTGACATTGTCTGCAAAAGACCAAATAGCATACAATGGTGAAGATACCCAGTTAGACCCTTTTGTTGAAAACTTCGTACTGGAAAGGCTTTCCGCTCAAAGTCCTCTTCGGGTACTGTTTGATGTTGTTCCAGGCATAAAATTTCAGGATGCTATTGAATTGATAAGCATGCAGCCAATTGCTTCAACTTTAGAAGCCTGGAAGAGGATGCAGGATATTGAACTTATGCACATGCGGTATGCTCTAGATTCAGCCATTCTTGCACTTGGAGTGATGGAAAAGAGTATGACCACTGAAAGTCATCAAGTTTCATTTTGCTATTTAAAAGACCTGCAGAACCATTTGGAGGCTGTAAATACTATCCCCCGCAAGATCATGATCGTGAATGTCATAATTTCGCTCTTGCATATGGATGATCAGTCTCTCAATTTGAATCATTGCGCCTCACCAACGAGTTATTCTGAAGCACACTACACATGTGCTTCAGAACAGATCAATCTGACTACATGTGAAGGGGGAAATGAATTGGTTATATCTTTCACAGGCAAACTACTTGAGATATTACATCACTGTCTTCCTTCAACGATAGCGGACCGTGATCATGCTCTTAGTGATGGTATAAATAGGGGTGGAAGACAAGCAGTGGAGTGGAGAGTGTCAATTGCTAAACACTTTATTGAAGAGTGGGAATGGCGGTTGTCAATTTTCCAGCGTCTCCTTCCATTATCTGAACGTCAGTGGAAATGGAAGGAAGCATTGACAGTATTACGTGCTGCACCATCTAAGCTACTTAACCTTTGCATGCAAAGGGCAAAGTATGACATCGGGGAAGAAGCAGTGCACCGATTCTCATTGTCTGCAGAAGATAGAGCTACACTTGAATTAGCTGAATGGGTAGATAGTGCTGTCAGAAGACAGTCGGTAGAAGATGTAGTCTCTCGTGCTGCTGATGATGGAACTTCTACAGTACATGATCTGGATTTTTCATCATTACGCTCTCAATTAGGTCCTTTGGCTGCAATTCTTCTTTGTATTGATGTTGCTGCTACTTCGGCACGGTCTGCAAAGATGTCCCAGCAGCTTTTGGATCAGGCATGCTCAAACTTCTTGAACTTGAATCTTGCTCAAGTTATGCTGTCTGAGATATATCCAGGAGTTTCTCCAAAGATGGGCTCCACGTACTGGGATCAGATTCTTGAAGTGGGAGTTATTTCTGTTCTAAAAAGAATCCTCAAGCGTTTACATGAGTTCTTGGATCAGGATGATCCTCCAGCCCTTCAGGCCACTCTGTCTGGGGAGATTTTCATCTCCTCGCCAAAGGACTCCCACCGACTGGGACAACGGGAACGTGTTCTTGATATGCTACATCATATGATTGAAGATGCTCACAAAGGCAAGCGACAGTTTCTTAGTGGTAAGCTCCATAATCTTGCAAGAGCTGTGGCTGATGAAGAATCAGAGCTCAATTTTTCTAAAGGAGAAGGCCCTTCTGTTGACCAAAAGGTTCTATCCGATTATGACAAGGATGGAGTTCTTGGACTGGGGTTAAGAGTTGCCAAACAGATACCTTCAAGTTCCACAGTTGGAGAAACTAGTGTGCAGCCTGTTGTTTATGATGTAAAGGACAGTGGGAAGAGATTGTTTGGTCCATTAAGTACCAAACCCATGACATATCTTTCACAATTTATTCTTCACATTGCTGCAATTGGTGACATAGTTGATGGCACAGATACAACTCATGATTTCAACTTTTTCTCCCTCGTGTATGAGTGGCCCAAGGATCTTTTAACCCGTCTTGTCTTTGACCGGGGCAGCACTGATGCAGCTGGTAAGGTAGCTGAGATTATGTGTGCAGATTTTGTGCATGAAGTAATTTCAGCATGTGTACCTCCTGTTTATCCCCCACGATCTGGGCATGGATGGGCCTGTATTCCAGTCATTCCCACCTTCCCTAAGAGTGGTTCGGAAAATAAAGTATTGTCCCCATCTTTCAAAGAAGCTAAGCCTAATTGTTACTCGCGCTCTTCATCTTTGCCTGGAATCCCTCTGTACCCTTTGCAGTTAGATATAGTAAAACATTTGGTCAAACTATCCCCAGTGAGGGCAGTCCTGGCATGTGTATTTGGGAGTAGCATTTTGTACAATGGCAGTAATTCTTCTATATCGAGCTCCTTGGATGATGGACTTCTACAGGCACCAGATGTTGATCGGTTGTTTTATGAGTTTGCTCTTGATCAATCTGAGAGGTTCCCAACTTTAAACCGATGGATACAAATGCAAACTAACCTGCATCGAGTTTCAGAGTTTGCTGTAACGATTAAGCAAACTGACGATGGTGGTGAGACTAGAGGTGAAGCAAGAGCTGCTATCAAGAGGCTTCGTGAGCTTGACAGTGATACTGAGTCAGAAGTTGATGATGTTGTTGGTAATAGTGTTTCAACAGCTTTACCAGACCTCGATAGCCAAGGTGGTACTGCTCTTGATTCATGGCGTGATTCTTCTAAATCGGATGTTGCTGAGTTTGACACTTCAGTTTTCCTTTCTTTTGATTGGGAAAATGAAGAACCTTATGAGAAAGCTGTACAAAGATTGATAGATGATGAAAAACTTATGGATGCTCTTGCTCTTTCCGATCGCTTTCTACGCAATGGAGCTTCAGATCAACTACTTCAGCTACTCATTGAACATGGGGAAGAGAACCAGTCAGTCTCTGGACACTCTCAGGGTTATGGTGGCAATAGCATTTGGAGCACTAGTTGGCAGTATTGCCTGCGGTTGAAGGATAAACAAGTGGCTGCCAGACTTGCTCTCAAGTGTATGCATGGATGGGAACTGGATGCTGCTTTAGACGTACTCACCATGTGCAGCTGCCACCTGCCTCAAAGTGACCCCATTAGGGAGGAGGTCATGTATAGGAGACAAGCTTTGCAGAGGTACAGCCACATTCTAAGTGCAGATGACCATTATAGCAGCTGGCAAGAGGTTGAGGCAGAGTGTAAGGAAGATCCTGAGGGGTTGGCACTTAGATTAGCTGGAAAAGGAGCTGTTTCTGCTGCCTTAGAAGTGGCTGAAAGCGCGGGGTTATCCATTGATTTGCGTAGGGAACTGCAGGGCCGGCAACTTGTGAAGCTTTTGACTGCAGATCCTCTCAATGGGGGAGGTCCAGCAGAAGCTTCACGATTTCTTTCTTCATTGCGCGACTCAGATGATGCTCTACCAGTTGCCATGGGTGCGATGCAGCTTTTACCTGATTTGCGGTCAAAGCAGCTTCTTGTTCATTTCTTCCTGAAGCGGAGAGAAGGGAATCTTTCAGATGTTGAGGTTTCTCGGCTTAATTCATGGGCCTTGGGGCTTCGTGTTCTGGCTGCCTTGCCATTGCCATGGCAGCAAAGATGTTCTTCCTTGCATGAGCACCCTCATTTGATACTTGAGGTTCTTCTGATGAGGAAACAACTACAATCTGCTGCTTCGATTCTCAAAGAATTTCCTTTGTTGAGAGACAATAATGCACTTATTGCCTATGCTACTAAAGCTATTGCAATCAGTATTAGCTCTCCCCCTAGAGAACATCGAGTATCTGTTTCGGGGACAAGATTAAAGCAGAAAACAAGAACAGGTGCACCTGTGAAGTCTTCTTTCACTAGCAGTCTCAGTAACTTGCAAAAAGAAGCTCGCAGAGCTTTCTCTTGGGCTCCACGAAATAGTGGAGACAGGTCCACCCCGAAAGATGGTTACCGTAAGAGAAAGAGTTCTGGATTGACACCCTCTGAAAAAGTAGCTTGGGAGGCCATGGCTGGAATCCAGGAGGATCGTGCTTCAACATATTCTGTTGATGGGCAAGAACGGCTTCCTTCAATTTCAATATCTGAAGAATGGATGCTAACTGGTGATCCATTGAAGGATGAAGCCGTTCGTGCATCTCACCGATACGAGAGTGCTCCTGACATAACGCTTTTCAAGGCACTGCTTTCTCTATGCTCAGATGATTCTGTGTCTGCAAAAACTGCATTGGATTTGTGCGTAACTCAGATGAAGAATGTACTGAGTTCCCAACAATTGCCAGAGAATGCATCTGTGGAAACCATTGGCCGAGCATATCATGCCACAGAGACGTTTGTACAGGGGCTACTTTATGCTAAATCACTGTTGAGAAAGCTTGTGGGCGGCAGTGATTTGTCGAGTAATTCTGAAAGAAGTAGGGATGCTGATGATGCATCTTCTGATGCTGGTAGCTCTAGTGTGGGTAGTCAGTCCACAGATGAGCTATCTGAAGTTCTGTTGCAGGCAGACACTTGGCTAGGACGTGCTGAGCTGCTTCAGAGCCTTCTGGGATCAGGAATTGCTGCTTCTCTAGATGATATTGCGGATAAAGAGTCATCTGCCTCTCTTCGTGATAGGCTGATTGTGGAAGAACGGTACAGCATGGCCGTATATACATGTAAAAAGTGCAAGATTGATGTGGTTCCTGTTTGGAATGCATGGGGACATGCTTTGATTCGGATGGAGCACTATGCACAAGCTCGCGTGAAGTTCAAGCAAGCTCTTCAGCTGTACAAAGGTGATCCTGCTCCTGTTATTCTTGAGATAATCAATACAATTGAAGGAGGTCCGCCAGTTGATGTTTCAGCTGTTCGTTCCATGTATGAACATTTGGCTAAAAGTGCACCAACAATCTTGGATGATTCTCTTTCTGCTGATTCATATCTCAATGTGTTATACATGCCATCCACATTTCCTCGTTCAGAGAGATCCAGGCGTTCTCAGGAATCTGCAAATAACAGCTCCGCATATATGTCAGCCTTTGAAGATGGACCACGCAGCAACTTAGACAGTGTTCGTTATGTTGAGTGTGTCAACTATTTACAAGAGTATGCCAGGCAGCATTTGCTCAATTTCATGTTCAGGCATGGCCACTATAATGACGCTTGCGTGTTGTTCTTTCCTCAAAATGCTGTTCCCCCTCCTCCTCAGCCATCAGTAGCAGGGGTGGCATCCTCATCTTCATCCCCTCAAAGACCAGATCCGCTAGGAACTGATTATGGGACCATTGATGATTTGTGTGATTTATGTGTTGGTTATGGCGCAATGCATGTTTTAGAAGAAGTGATCTCAGTAAGAATGTCATCTACAACCCCACAAGATGTGGCAGTGATCCAGCATACAGCTGCAGCCCTTGCTCGTATTTGTGTCTACTGTGAAACACATAGGCATTTCAATTATTTATACAAGTTTCAGGTTATTAAAAAGGACCATGTCGCTGCTGGACTGTGCTGCATCCAACTTTTTATGAACTCTTCTTTGCAAGAGGAAGCTATAAAACATTTGGAAAATTCCAAGATGCACTTTGATGAAGCGCTATCAGCACGGTACAAAGGTGGGGATTCTACTAAGCTTGTGACGAAGGGTGTTAGAGGAAAAAGTGCCTCTGAAAAGCTCACTGAAGAAGGACTCGTCAAGTTTTCTGCTCGGGTATCAATTCAGGTTGAAGTTGTGAGATCCTATAATGATTCAGATGGACCCCATTGGAAACATTCACTTTTTGGAAACCCAAATGACTCCGAAACATTCAGGAGAAGGTGTAAAATTGCTGAATCTCTTGTGGAAAAGAACTTCGATTTGGCTTTCCAAGTGATTTATGAATTCACCCTTCCAGCTGTGGATATATATGCTGGTGTAGCTGCATCACTTGCTGAGAGAAAAAAAGGTAGTCAGCTGACAGAATTTTTTAGAAACATTAAAGGGACCATTGATGACGATGATTGGGACCAGGTCTTGGGAGCTGCAATTAATGTATATGCTAACAAACACAAAGAACGCCCTGACCGTCTTATAGACATGTTGACCAGTAGCCACAGGAAGGTTCTGGCTTGTGTGGTTTGTGGACGTCTAAAAAGTGCATTCCAAATTGCTTCTCGTAGCGGAAGTGTCGCTGATGTCCAATATGTAGCTCATCAGGCATTGCATGCGAATGCGCTTCCTGTACTCGATATGTGTAAACAATGGTTGGCTCAGTATATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

2533

Amino Acids

282.28

Weight (kDa)

5.39

Isoelectric Point (pI)

51.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_ZFYVE26 PF25569 2411 - 2530 2.4e-32 ZFYVE26-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1248, 4464
AasI GACNNNNNNGTC 1 cut(s) 1267
AatII GACGTC 1 cut(s) 7468
Acc36I ACCTGC 5 cut(s) 1248, 1417, 1920, 3876, 4464
AccB1I GGYRCC 1 cut(s) 3775
AccB7I CCANNNNNTGG 5 cut(s) 1356, 2763, 2914, 3491, 7354
AccBSI CCGCTC 2 cut(s) 409, 1676
AccI GTMKAC 1 cut(s) 6771
AccII CGCG 7 cut(s) 99, 291, 835, 3601, 4658, 4779, 6105
AcoI YGGCCR 6 cut(s) 36, 58, 693, 5668, 6006, 6490
AcsI RAATTY 7 cut(s) 1092, 1567, 1721, 5063, 6910, 7220, 7301
AcyI GRCGYC 2 cut(s) 246, 7465
AdeI CACNNNGTG 1 cut(s) 4443
AfeI AGCGCT 1 cut(s) 6936
AflIII ACRYGT 6 cut(s) 1206, 2057, 2087, 2929, 6017, 7416
AhlI ACTAGT 3 cut(s) 538, 3173, 4334
AjiI CACGTC 1 cut(s) 5885
AjuI GAANNNNNNNTTGG 4 cut(s) 2023, 2055, 7181, 7213
AloI GAACNNNNNNTCC 2 cut(s) 566, 598
Alw44I GTGCAC 3 cut(s) 2420, 5199, 6243
AlwNI CAGNNNCTG 1 cut(s) 4292
Ama87I CYCGRG 1 cut(s) 7047
Aor51HI AGCGCT 1 cut(s) 6936
ApaLI GTGCAC 3 cut(s) 2420, 5199, 6243
ApoI RAATTY 7 cut(s) 1092, 1567, 1721, 5063, 6910, 7220, 7301
AseI ATTAAT 2 cut(s) 1397, 7368
Asp700I GAANNNNTTC 5 cut(s) 1113, 2931, 5329, 5427, 5490
AsuC2I CCSGG 2 cut(s) 197, 3389
AsuII TTCGAA 1 cut(s) 402
AsuNHI GCTAGC 1 cut(s) 1301
AvaI CYCGRG 1 cut(s) 7047
AxyI CCTNAGG 1 cut(s) 4590
BaeGI GKGCMC 3 cut(s) 2424, 5203, 6247
BaeI ACNNNNGTAYC 4 cut(s) 5500, 5533, 6940, 6973
BalI TGGCCA 2 cut(s) 695, 6492
BanI GGYRCC 1 cut(s) 3775
BanII GRGCYC 6 cut(s) 72, 231, 2756, 3045, 3752, 5275
BauI CACGAG 3 cut(s) 1221, 2520, 3341
BbsI GAAGAC 6 cut(s) 1106, 1322, 2147, 2221, 2500, 5205
BbvCI CCTCAGC 1 cut(s) 6549
BceAI ACGGC 6 cut(s) 110, 469, 1451, 5441, 5474, 5993
BciVI GTATCC 1 cut(s) 3843
BclI TGATCA 4 cut(s) 553, 1996, 2179, 3814
BcnI CCSGG 2 cut(s) 197, 3389
BcuI ACTAGT 3 cut(s) 538, 3173, 4334
BfoI RGCGCY 1 cut(s) 6938
BfuAI ACCTGC 5 cut(s) 1248, 1417, 1920, 3876, 4464
BfuI GTATCC 1 cut(s) 3843
BglI GCCNNNNNGGC 1 cut(s) 2861
BglII AGATCT 3 cut(s) 898, 1073, 1522
BlpI GCTNAGC 2 cut(s) 3582, 5889
BmeT110I CYCGRG 1 cut(s) 7047
BmgBI CACGTC 1 cut(s) 5885
BmrI ACTGGG 5 cut(s) 1624, 2773, 2924, 3131, 3671
BmtI GCTAGC 1 cut(s) 1305
BmuI ACTGGG 5 cut(s) 1624, 2773, 2924, 3131, 3671
BoxI GACNNNNGTC 1 cut(s) 140
BpiI GAAGAC 6 cut(s) 1106, 1322, 2147, 2221, 2500, 5205
BplI GAGNNNNNCTC 4 cut(s) 69, 101, 1034, 1066
BpmI CTGGAG 2 cut(s) 116, 2835
Bpu10I CCTNAGC 1 cut(s) 6549
Bpu1102I GCTNAGC 2 cut(s) 3582, 5889
Bpu14I TTCGAA 1 cut(s) 402
BpuEI CTTGAG 8 cut(s) 613, 890, 2156, 2691, 2798, 4376, 5030, 6182
BpuMI CCSGG 2 cut(s) 197, 3389
Bsa29I ATCGAT 1 cut(s) 324
BsaAI YACGTR 2 cut(s) 2351, 2760
BsaBI GATNNNNATC 5 cut(s) 1086, 1958, 2885, 3786, 6282
BsaHI GRCGYC 2 cut(s) 246, 7465
BsaWI WCCGGW 2 cut(s) 152, 686
Bse118I RCCGGY 1 cut(s) 4695
Bse21I CCTNAGG 1 cut(s) 4590
Bse3DI GCAATG 8 cut(s) 885, 2017, 3276, 4234, 4772, 4955, 6672, 7538
Bse8I GATNNNNATC 5 cut(s) 1086, 1958, 2885, 3786, 6282
BseCI ATCGAT 1 cut(s) 324
BseJI GATNNNNATC 5 cut(s) 1086, 1958, 2885, 3786, 6282
BseMI GCAATG 8 cut(s) 885, 2017, 3276, 4234, 4772, 4955, 6672, 7538
BsePI GCGCGC 1 cut(s) 289
BseSI GKGCMC 3 cut(s) 2424, 5203, 6247
BseYI CCCAGC 1 cut(s) 2655
BsgI GTGCAG 6 cut(s) 1005, 2340, 3200, 3453, 4465, 4554
Bsh1236I CGCG 7 cut(s) 99, 291, 835, 3601, 4658, 4779, 6105
Bsh1285I CGRYCG 2 cut(s) 157, 4216
BshNI GGYRCC 1 cut(s) 3775
BshVI ATCGAT 1 cut(s) 324
BsiEI CGRYCG 2 cut(s) 157, 4216
BsiHKCI CYCGRG 1 cut(s) 7047
BsiSI CCGG 6 cut(s) 153, 197, 527, 687, 3388, 4696
BslFI GGGAC 9 cut(s) 163, 2638, 2931, 3547, 5182, 6078, 6637, 7336, 7358
BsmBI CGTCTC 3 cut(s) 444, 2300, 5684
BsmFI GGGAC 9 cut(s) 163, 2638, 2931, 3547, 5182, 6078, 6637, 7336, 7358
BsmI GAATGC 4 cut(s) 5653, 6061, 7478, 7555
BsoBI CYCGRG 1 cut(s) 7047
Bsp119I TTCGAA 1 cut(s) 402
Bsp1407I TGTACA 5 cut(s) 646, 3720, 4162, 5698, 6132
Bsp1720I GCTNAGC 2 cut(s) 3582, 5889
Bsp19I CCATGG 4 cut(s) 1350, 4806, 4961, 5370
BspDI ATCGAT 1 cut(s) 324
BspFNI CGCG 7 cut(s) 99, 291, 835, 3601, 4658, 4779, 6105
BspHI TCATGA 2 cut(s) 1956, 3319
BspMAI CTGCAG 8 cut(s) 975, 1038, 1384, 1917, 2443, 4692, 4723, 6751
BspMI ACCTGC 5 cut(s) 1248, 1417, 1920, 3876, 4464
BspOI GCTAGC 1 cut(s) 1305
BspQI GCTCTTC 3 cut(s) 399, 3610, 6129
BspT104I TTCGAA 1 cut(s) 402
BspT107I GGYRCC 1 cut(s) 3775
BsrBI CCGCTC 2 cut(s) 409, 1676
BsrDI GCAATG 8 cut(s) 885, 2017, 3276, 4234, 4772, 4955, 6672, 7538
BsrFI RCCGGY 1 cut(s) 4695
BsrGI TGTACA 5 cut(s) 646, 3720, 4162, 5698, 6132
BssAI RCCGGY 1 cut(s) 4695
BssHII GCGCGC 1 cut(s) 289
BssNI GRCGYC 2 cut(s) 246, 7465
BssSI CACGAG 3 cut(s) 1221, 2520, 3341
BssT1I CCWWGG 8 cut(s) 1350, 3357, 3753, 4045, 4806, 4926, 4961, 5370
Bst2BI CACGAG 3 cut(s) 1221, 2520, 3341
BstACI GRCGYC 2 cut(s) 246, 7465
BstAUI TGTACA 5 cut(s) 646, 3720, 4162, 5698, 6132
BstBAI YACGTR 2 cut(s) 2351, 2760
BstBI TTCGAA 1 cut(s) 402
BstDSI CCRYGG 4 cut(s) 1350, 4806, 4961, 5370
BstEII GGTNACC 1 cut(s) 5312
BstENI CCTNNNNNAGG 1 cut(s) 1783
BstFNI CGCG 7 cut(s) 99, 291, 835, 3601, 4658, 4779, 6105
BstH2I RGCGCY 1 cut(s) 6938
BstMCI CGRYCG 2 cut(s) 157, 4216
BstPAI GACNNNNGTC 1 cut(s) 140
BstPI GGTNACC 1 cut(s) 5312
BstSLI GKGCMC 3 cut(s) 2424, 5203, 6247
BstUI CGCG 7 cut(s) 99, 291, 835, 3601, 4658, 4779, 6105
BstV2I GAAGAC 6 cut(s) 1106, 1322, 2147, 2221, 2500, 5205
BstX2I RGATCY 9 cut(s) 898, 1073, 1522, 3361, 4585, 4723, 6329, 6601, 7076
BstXI CCANNNNNNTGG 1 cut(s) 4962
BstYI RGATCY 9 cut(s) 898, 1073, 1522, 3361, 4585, 4723, 6329, 6601, 7076
Bsu15I ATCGAT 1 cut(s) 324
Bsu36I CCTNAGG 1 cut(s) 4590
BsuI GTATCC 1 cut(s) 3843
BsuTUI ATCGAT 1 cut(s) 324
BtgI CCRYGG 4 cut(s) 1350, 4806, 4961, 5370
BtgZI GCGATG 2 cut(s) 73, 4829
BtrI CACGTC 1 cut(s) 5885
BtsI GCAGTG 5 cut(s) 2229, 2424, 5543, 5755, 6735
BveI ACCTGC 5 cut(s) 1248, 1417, 1920, 3876, 4464
CaiI CAGNNNCTG 1 cut(s) 4292
CciI TCATGA 2 cut(s) 1956, 3319
Cfr10I RCCGGY 1 cut(s) 4695
ClaI ATCGAT 1 cut(s) 324
CpoI CGGWCCG 1 cut(s) 2173
CseI GACGC 3 cut(s) 254, 2282, 6512
CsiI ACCWGGT 1 cut(s) 7347
CspCI CAANNNNNGTGG 4 cut(s) 1391, 1426, 3003, 3038
CspI CGGWCCG 1 cut(s) 2173
DraI TTTAAA 2 cut(s) 1905, 3840
DraIII CACNNNGTG 1 cut(s) 4443
DrdI GACNNNNNNGTC 1 cut(s) 1267
DseDI GACNNNNNNGTC 1 cut(s) 1267
EaeI YGGCCR 6 cut(s) 36, 58, 693, 5668, 6006, 6490
EciI GGCGGA 4 cut(s) 244, 428, 1086, 6180
Ecl136II GAGCTC 3 cut(s) 229, 3043, 3750
Eco130I CCWWGG 8 cut(s) 1350, 3357, 3753, 4045, 4806, 4926, 4961, 5370
Eco24I GRGCYC 6 cut(s) 72, 231, 2756, 3045, 3752, 5275
Eco32I GATATC 2 cut(s) 1124, 1479
Eco47III AGCGCT 1 cut(s) 6936
Eco53kI GAGCTC 3 cut(s) 229, 3043, 3750
Eco81I CCTNAGG 1 cut(s) 4590
Eco88I CYCGRG 1 cut(s) 7047
Eco91I GGTNACC 1 cut(s) 5312
EcoICRI GAGCTC 3 cut(s) 229, 3043, 3750
EcoNI CCTNNNNNAGG 1 cut(s) 1783
EcoO109I RGGNCCY 2 cut(s) 2588, 3065
EcoO65I GGTNACC 1 cut(s) 5312
EcoRI GAATTC 2 cut(s) 1567, 7220
EcoRV GATATC 2 cut(s) 1124, 1479
EcoT14I CCWWGG 8 cut(s) 1350, 3357, 3753, 4045, 4806, 4926, 4961, 5370
EcoT22I ATGCAT 5 cut(s) 4404, 5653, 5797, 6061, 6672
EcoT38I GRGCYC 6 cut(s) 72, 231, 2756, 3045, 3752, 5275
ErhI CCWWGG 8 cut(s) 1350, 3357, 3753, 4045, 4806, 4926, 4961, 5370
Esp3I CGTCTC 3 cut(s) 444, 2300, 5684
FalI AAGNNNNNCTT 8 cut(s) 4872, 4904, 4963, 4995, 5412, 5444, 6908, 6940
FaqI GGGAC 9 cut(s) 163, 2638, 2931, 3547, 5182, 6078, 6637, 7336, 7358
FauI CCCGC 5 cut(s) 38, 118, 402, 1955, 4651
FauNDI CATATG 2 cut(s) 1989, 2952
FbaI TGATCA 4 cut(s) 553, 1996, 2179, 3814
FblI GTMKAC 1 cut(s) 6771
FriOI GRGCYC 6 cut(s) 72, 231, 2756, 3045, 3752, 5275
GsaI CCCAGC 1 cut(s) 2659
GsuI CTGGAG 2 cut(s) 116, 2835
HaeII RGCGCY 1 cut(s) 6938
HapII CCGG 6 cut(s) 153, 197, 527, 687, 3388, 4696
HgaI GACGC 3 cut(s) 254, 2282, 6512
Hin1I GRCGYC 2 cut(s) 246, 7465
HincII GTYRAC 3 cut(s) 3076, 6436, 7422
HindII GTYRAC 3 cut(s) 3076, 6436, 7422
HindIII AAGCTT 5 cut(s) 4503, 4709, 4752, 5735, 6971
HpaII CCGG 6 cut(s) 153, 197, 527, 687, 3388, 4696
Hpy99I CGWCG 2 cut(s) 227, 248
HpyCH4IV ACGT 9 cut(s) 1111, 2314, 2350, 2759, 2929, 4431, 5693, 5884, 7465
HpySE526I ACGT 9 cut(s) 1111, 2314, 2350, 2759, 2929, 4431, 5693, 5884, 7465
Hsp92I GRCGYC 2 cut(s) 246, 7465
KroI GCCGGC 1 cut(s) 4695
KroNI GCCGGC 1 cut(s) 4697
Ksp22I TGATCA 4 cut(s) 553, 1996, 2179, 3814
LguI GCTCTTC 3 cut(s) 399, 3610, 6129
MabI ACCWGGT 1 cut(s) 7347
MaeII ACGT 9 cut(s) 1111, 2314, 2350, 2759, 2929, 4431, 5693, 5884, 7465
MbiI CCGCTC 2 cut(s) 409, 1676
MfeI CAATTG 5 cut(s) 1758, 2241, 3285, 5636, 6177
MflI RGATCY 9 cut(s) 898, 1073, 1522, 3361, 4585, 4723, 6329, 6601, 7076
MlsI TGGCCA 2 cut(s) 695, 6492
MluNI TGGCCA 2 cut(s) 695, 6492
MlyI GAGTC 6 cut(s) 2897, 3992, 4775, 5963, 7023, 7130
MmeI TCCRAC 4 cut(s) 480, 620, 3145, 6883
Mox20I TGGCCA 2 cut(s) 695, 6492
Mph1103I ATGCAT 5 cut(s) 4404, 5653, 5797, 6061, 6672
MroNI GCCGGC 1 cut(s) 4695
MroXI GAANNNNTTC 5 cut(s) 1113, 2931, 5329, 5427, 5490
MscI TGGCCA 2 cut(s) 695, 6492
MslI CAYNNNNRTG 8 cut(s) 701, 783, 1961, 1992, 4960, 6498, 6927, 7548
Msp20I TGGCCA 2 cut(s) 695, 6492
MspA1I CMGCKG 8 cut(s) 3407, 4449, 4554, 6130, 6209, 6746, 7235, 7294
MspI CCGG 6 cut(s) 153, 197, 527, 687, 3388, 4696
MunI CAATTG 5 cut(s) 1758, 2241, 3285, 5636, 6177
Mva1269I GAATGC 4 cut(s) 5653, 6061, 7478, 7555
MvnI CGCG 7 cut(s) 99, 291, 835, 3601, 4658, 4779, 6105
NaeI GCCGGC 1 cut(s) 4697
NciI CCSGG 2 cut(s) 197, 3389
NcoI CCATGG 4 cut(s) 1350, 4806, 4961, 5370
NdeI CATATG 2 cut(s) 1989, 2952
NgoMIV GCCGGC 1 cut(s) 4695
NheI GCTAGC 1 cut(s) 1301
NmeAIII GCCGAG 4 cut(s) 36, 319, 4888, 5696
NmuCI GTSAC 4 cut(s) 1578, 3290, 4466, 6976
NsiI ATGCAT 5 cut(s) 4404, 5653, 5797, 6061, 6672
NspV TTCGAA 1 cut(s) 402
PaeI GCATGC 4 cut(s) 1753, 2386, 2679, 7547
PagI TCATGA 2 cut(s) 1956, 3319
PaqCI CACCTGC 2 cut(s) 1248, 4464
PauI GCGCGC 1 cut(s) 289
PciI ACATGT 5 cut(s) 1206, 2057, 2087, 6017, 7416
PciSI GCTCTTC 3 cut(s) 399, 3610, 6129
PcsI WCGNNNNNNNCGW 3 cut(s) 63, 123, 7402
PctI GAATGC 4 cut(s) 5653, 6061, 7478, 7555
PdiI GCCGGC 1 cut(s) 4697
PdmI GAANNNNTTC 5 cut(s) 1113, 2931, 5329, 5427, 5490
PflFI GACNNNGTC 3 cut(s) 1588, 6833, 7349
PflMI CCANNNNNTGG 5 cut(s) 1356, 2763, 2914, 3491, 7354
PfoI TCCNGGA 2 cut(s) 2731, 5382
Ple19I CGATCG 1 cut(s) 4216
PleI GAGTC 6 cut(s) 2897, 3991, 4775, 5962, 7023, 7130
PpsI GAGTC 6 cut(s) 2897, 3991, 4775, 5962, 7023, 7130
Ppu21I YACGTR 2 cut(s) 2351, 2760
PpuMI RGGWCCY 1 cut(s) 2588
PscI ACATGT 5 cut(s) 1206, 2057, 2087, 6017, 7416
PshAI GACNNNNGTC 1 cut(s) 140
PshBI ATTAAT 2 cut(s) 1397, 7368
Psp124BI GAGCTC 3 cut(s) 231, 3045, 3752
Psp5II RGGWCCY 1 cut(s) 2588
PspEI GGTNACC 1 cut(s) 5312
PspFI CCCAGC 1 cut(s) 2655
PspPPI RGGWCCY 1 cut(s) 2588
PstI CTGCAG 8 cut(s) 975, 1038, 1384, 1917, 2443, 4692, 4723, 6751
PstNI CAGNNNCTG 1 cut(s) 4292
PsuI RGATCY 9 cut(s) 898, 1073, 1522, 3361, 4585, 4723, 6329, 6601, 7076
PsyI GACNNNGTC 3 cut(s) 1588, 6833, 7349
PteI GCGCGC 1 cut(s) 289
PvuI CGATCG 1 cut(s) 4216
PvuII CAGCTG 8 cut(s) 3407, 4449, 4554, 6130, 6209, 6746, 7235, 7294
RseI CAYNNNNRTG 8 cut(s) 701, 783, 1961, 1992, 4960, 6498, 6927, 7548
Rsr2I CGGWCCG 1 cut(s) 2173
RsrII CGGWCCG 1 cut(s) 2173
SacI GAGCTC 3 cut(s) 231, 3045, 3752
SapI GCTCTTC 3 cut(s) 399, 3610, 6129
SchI GAGTC 6 cut(s) 2897, 3992, 4775, 5963, 7023, 7130
SexAI ACCWGGT 1 cut(s) 7347
SfuI TTCGAA 1 cut(s) 402
SmiMI CAYNNNNRTG 8 cut(s) 701, 783, 1961, 1992, 4960, 6498, 6927, 7548
SmlI CTYRAG 8 cut(s) 592, 905, 2135, 2706, 2813, 4391, 5009, 6161
SmoI CTYRAG 8 cut(s) 592, 905, 2135, 2706, 2813, 4391, 5009, 6161
SpeI ACTAGT 3 cut(s) 538, 3173, 4334
SphI GCATGC 4 cut(s) 1753, 2386, 2679, 7547
SspI AATATT 2 cut(s) 966, 1309
SstI GAGCTC 3 cut(s) 231, 3045, 3752
StyI CCWWGG 8 cut(s) 1350, 3357, 3753, 4045, 4806, 4926, 4961, 5370
TaiI ACGT 9 cut(s) 1114, 2317, 2353, 2762, 2932, 4434, 5696, 5887, 7468
TatI WGTACW 8 cut(s) 646, 2548, 3720, 4162, 5620, 5698, 6132, 7561
TauI GCSGC 2 cut(s) 41, 5748
TseFI GTSAC 4 cut(s) 1578, 3290, 4466, 6976
Tsp45I GTSAC 4 cut(s) 1578, 3290, 4466, 6976
Tth111I GACNNNGTC 3 cut(s) 1588, 6833, 7349
Van91I CCANNNNNTGG 5 cut(s) 1356, 2763, 2914, 3491, 7354
VneI GTGCAC 3 cut(s) 2420, 5199, 6243
VspI ATTAAT 2 cut(s) 1397, 7368
XagI CCTNNNNNAGG 1 cut(s) 1783
XapI RAATTY 7 cut(s) 1092, 1567, 1721, 5063, 6910, 7220, 7301
XbaI TCTAGA 2 cut(s) 1825, 5932
XcmI CCANNNNNNNNNTGG 2 cut(s) 4289, 6839
XmiI GTMKAC 1 cut(s) 6771
XmnI GAANNNNTTC 5 cut(s) 1113, 2931, 5329, 5427, 5490
ZraI GACGTC 1 cut(s) 7466
Zsp2I ATGCAT 5 cut(s) 4404, 5653, 5797, 6061, 6672
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.