phosphatidylinositol-3-phosphate binding
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G25730 AT2G25730 AT2G25730 AT2G25730 |
| fragaria_vesca | FvH4_2g30330 FvH4_2g30330 FvH4_2g30330 FvH4_2g30330 FvH4_2g30330 FvH4_2g30330 FvH4_2g30330 |
| malus_domestica | MD15G1113500.v1.1 |
| prunus_persica | Prupe.1G464500_v2.0.a1 Prupe.1G464500_v2.0.a1 Prupe.5G112400_v2.0.a1 |
| pyrus_communis | pycom15g10180 |
| rosa_chinensis | RchiOBHm_Chr6g0312581 |
| rosa_laevigata | RLG00000010315 |
| rosa_multiflora | Rmu_sc0003094.1_g000005 Rmu_sc0008363.1_g000004 |
| rosa_roxburghii | Rroxscaffold_7G00156680 |
| rosa_rugosa | Rorug06G0396500 Rorug06G0396600 |
| rosa_samantha | Rh6AG514400 Rh6BG525500 Rh6CG530700 Rh6DG516500 |
| rosa_wichuraiana | Rw6G044700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 6528 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 5117 |
| Acc36I | ACCTGC | 1 cut(s) | 5277 |
| AccB1I | GGYRCC | 3 cut(s) | 598, 1040, 3805 |
| AccB7I | CCANNNNNTGG | 4 cut(s) | 1413, 2793, 3521, 7384 |
| AccBSI | CCGCTC | 2 cut(s) | 70, 1046 |
| AccI | GTMKAC | 2 cut(s) | 215, 6770 |
| AccII | CGCG | 9 cut(s) | 38, 143, 423, 425, 892, 3990, 4789, 5916, 7078 |
| AccIII | TCCGGA | 1 cut(s) | 2869 |
| AclI | AACGTT | 1 cut(s) | 165 |
| AcoI | YGGCCR | 2 cut(s) | 33, 151 |
| AcyI | GRCGYC | 2 cut(s) | 599, 5372 |
| AdeI | CACNNNGTG | 1 cut(s) | 4473 |
| AflIII | ACRYGT | 5 cut(s) | 1263, 1294, 2147, 7446, 7626 |
| AjnI | CCWGG | 8 cut(s) | 30, 1001, 1395, 1768, 1835, 2761, 6362, 7377 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 377, 409, 7211, 7243 |
| Alw44I | GTGCAC | 2 cut(s) | 5229, 6273 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 316, 1396, 4019, 4091, 4322 |
| Ama87I | CYCGRG | 2 cut(s) | 107, 5170 |
| Aor13HI | TCCGGA | 1 cut(s) | 2869 |
| ApaLI | GTGCAC | 2 cut(s) | 5229, 6273 |
| AseI | ATTAAT | 2 cut(s) | 1454, 7398 |
| Asp700I | GAANNNNTTC | 6 cut(s) | 350, 1170, 4918, 5359, 5457, 5520 |
| AspLEI | GCGC | 9 cut(s) | 145, 423, 425, 601, 1875, 5918, 6695, 7078, 7428 |
| AsuC2I | CCSGG | 3 cut(s) | 74, 546, 3648 |
| AsuHPI | GGTGA | 8 cut(s) | 763, 881, 1943, 2916, 3116, 5021, 5510, 5525 |
| AsuII | TTCGAA | 1 cut(s) | 414 |
| AsuNHI | GCTAGC | 1 cut(s) | 1358 |
| AvaI | CYCGRG | 2 cut(s) | 107, 5170 |
| AxyI | CCTNAGG | 2 cut(s) | 1200, 4620 |
| BaeGI | GKGCMC | 3 cut(s) | 5233, 5551, 6277 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 4128, 4161 |
| BamHI | GGATCC | 1 cut(s) | 2866 |
| BanI | GGYRCC | 3 cut(s) | 598, 1040, 3805 |
| BanII | GRGCYC | 6 cut(s) | 100, 114, 228, 2105, 5305, 5660 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 4249, 4281 |
| BauI | CACGAG | 4 cut(s) | 2580, 3371, 5251, 6132 |
| BbsI | GAAGAC | 8 cut(s) | 1163, 2207, 2281, 2348, 2560, 4955, 5235, 5450 |
| BceAI | ACGGC | 2 cut(s) | 107, 6503 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 2666, 2700, 4767, 4801 |
| BciT130I | CCWGG | 8 cut(s) | 32, 1003, 1397, 1770, 1837, 2763, 6364, 7379 |
| BciVI | GTATCC | 5 cut(s) | 442, 1309, 3334, 3873, 5420 |
| BclI | TGATCA | 2 cut(s) | 1216, 3844 |
| BcnI | CCSGG | 3 cut(s) | 74, 546, 3648 |
| BfoI | RGCGCY | 2 cut(s) | 602, 7429 |
| BfuAI | ACCTGC | 1 cut(s) | 5277 |
| BfuI | GTATCC | 5 cut(s) | 442, 1309, 3334, 3873, 5420 |
| BglII | AGATCT | 4 cut(s) | 955, 1130, 1975, 2614 |
| BlpI | GCTNAGC | 4 cut(s) | 3612, 4128, 5654, 5919 |
| BmeT110I | CYCGRG | 2 cut(s) | 107, 5170 |
| BmiI | GGNNCC | 9 cut(s) | 600, 1042, 2650, 2785, 2868, 3807, 5304, 6655, 7376 |
| BmrI | ACTGGG | 8 cut(s) | 1037, 2105, 2193, 2635, 2803, 3701, 7381, 7615 |
| BmtI | GCTAGC | 1 cut(s) | 1362 |
| BmuI | ACTGGG | 8 cut(s) | 1037, 2105, 2193, 2635, 2803, 3701, 7381, 7615 |
| BoxI | GACNNNNGTC | 1 cut(s) | 137 |
| BpiI | GAAGAC | 8 cut(s) | 1163, 2207, 2281, 2348, 2560, 4955, 5235, 5450 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1091, 1123, 4519, 4551 |
| BpmI | CTGGAG | 4 cut(s) | 113, 1654, 2865, 3486 |
| Bpu10I | CCTNAGC | 1 cut(s) | 3441 |
| Bpu1102I | GCTNAGC | 4 cut(s) | 3612, 4128, 5654, 5919 |
| Bpu14I | TTCGAA | 1 cut(s) | 414 |
| BpuEI | CTTGAG | 6 cut(s) | 947, 2721, 3760, 4406, 5060, 6212 |
| BpuMI | CCSGG | 3 cut(s) | 74, 546, 3648 |
| Bsa29I | ATCGAT | 1 cut(s) | 7085 |
| BsaAI | YACGTR | 4 cut(s) | 2252, 2411, 4256, 4808 |
| BsaBI | GATNNNNATC | 3 cut(s) | 3816, 4248, 6312 |
| BsaHI | GRCGYC | 2 cut(s) | 599, 5372 |
| BsaWI | WCCGGW | 3 cut(s) | 2869, 3544, 5315 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 920, 950, 3312, 3342, 4351, 4381 |
| Bse118I | RCCGGY | 4 cut(s) | 153, 193, 3630, 4725 |
| Bse21I | CCTNAGG | 2 cut(s) | 1200, 4620 |
| Bse3DI | GCAATG | 4 cut(s) | 4851, 4985, 6702, 7568 |
| Bse8I | GATNNNNATC | 3 cut(s) | 3816, 4248, 6312 |
| BseAI | TCCGGA | 1 cut(s) | 2869 |
| BseBI | CCWGG | 8 cut(s) | 32, 1003, 1397, 1770, 1837, 2763, 6364, 7379 |
| BseCI | ATCGAT | 1 cut(s) | 7085 |
| BseJI | GATNNNNATC | 3 cut(s) | 3816, 4248, 6312 |
| BseMI | GCAATG | 4 cut(s) | 4851, 4985, 6702, 7568 |
| BsePI | GCGCGC | 1 cut(s) | 421 |
| BseRI | GAGGAG | 6 cut(s) | 191, 658, 769, 800, 832, 941 |
| BseSI | GKGCMC | 3 cut(s) | 5233, 5551, 6277 |
| BseYI | CCCAGC | 2 cut(s) | 1187, 2715 |
| BsgI | GTGCAG | 7 cut(s) | 3230, 3483, 4104, 4214, 4495, 4584, 4707 |
| Bsh1236I | CGCG | 9 cut(s) | 38, 143, 423, 425, 892, 3990, 4789, 5916, 7078 |
| Bsh1285I | CGRYCG | 1 cut(s) | 219 |
| BshNI | GGYRCC | 3 cut(s) | 598, 1040, 3805 |
| BshVI | ATCGAT | 1 cut(s) | 7085 |
| BsiEI | CGRYCG | 1 cut(s) | 219 |
| BsiHKCI | CYCGRG | 2 cut(s) | 107, 5170 |
| BsmBI | CGTCTC | 3 cut(s) | 1932, 5714, 7442 |
| BsmI | GAATGC | 5 cut(s) | 3540, 5683, 6091, 7508, 7585 |
| BsoBI | CYCGRG | 2 cut(s) | 107, 5170 |
| Bsp119I | TTCGAA | 1 cut(s) | 414 |
| Bsp13I | TCCGGA | 1 cut(s) | 2869 |
| Bsp1407I | TGTACA | 5 cut(s) | 3750, 4324, 5728, 6162, 6327 |
| Bsp1720I | GCTNAGC | 4 cut(s) | 3612, 4128, 5654, 5919 |
| Bsp19I | CCATGG | 4 cut(s) | 1407, 4836, 4991, 5400 |
| BspDI | ATCGAT | 1 cut(s) | 7085 |
| BspEI | TCCGGA | 1 cut(s) | 2869 |
| BspFNI | CGCG | 9 cut(s) | 38, 143, 423, 425, 892, 3990, 4789, 5916, 7078 |
| BspHI | TCATGA | 2 cut(s) | 2022, 6373 |
| BspLI | GGNNCC | 9 cut(s) | 600, 1042, 2650, 2785, 2868, 3807, 5304, 6655, 7376 |
| BspMAI | CTGCAG | 6 cut(s) | 1441, 1983, 2503, 3804, 4542, 4753 |
| BspMI | ACCTGC | 1 cut(s) | 5277 |
| BspOI | GCTAGC | 1 cut(s) | 1362 |
| BspQI | GCTCTTC | 2 cut(s) | 411, 2110 |
| BspT104I | TTCGAA | 1 cut(s) | 414 |
| BspT107I | GGYRCC | 3 cut(s) | 598, 1040, 3805 |
| BsrBI | CCGCTC | 2 cut(s) | 70, 1046 |
| BsrDI | GCAATG | 4 cut(s) | 4851, 4985, 6702, 7568 |
| BsrFI | RCCGGY | 4 cut(s) | 153, 193, 3630, 4725 |
| BsrGI | TGTACA | 5 cut(s) | 3750, 4324, 5728, 6162, 6327 |
| BssAI | RCCGGY | 4 cut(s) | 153, 193, 3630, 4725 |
| BssHII | GCGCGC | 1 cut(s) | 421 |
| BssNAI | GTATAC | 1 cut(s) | 6771 |
| BssNI | GRCGYC | 2 cut(s) | 599, 5372 |
| BssSI | CACGAG | 4 cut(s) | 2580, 3371, 5251, 6132 |
| BssT1I | CCWWGG | 9 cut(s) | 1407, 2652, 3387, 3783, 4075, 4097, 4836, 4991, 5400 |
| Bst1107I | GTATAC | 1 cut(s) | 6771 |
| Bst2BI | CACGAG | 4 cut(s) | 2580, 3371, 5251, 6132 |
| Bst2UI | CCWGG | 8 cut(s) | 32, 1003, 1397, 1770, 1837, 2763, 6364, 7379 |
| BstACI | GRCGYC | 2 cut(s) | 599, 5372 |
| BstAPI | GCANNNNNTGC | 6 cut(s) | 2303, 5615, 5711, 6057, 6496, 7574 |
| BstAUI | TGTACA | 5 cut(s) | 3750, 4324, 5728, 6162, 6327 |
| BstBAI | YACGTR | 4 cut(s) | 2252, 2411, 4256, 4808 |
| BstBI | TTCGAA | 1 cut(s) | 414 |
| BstDSI | CCRYGG | 4 cut(s) | 1407, 4836, 4991, 5400 |
| BstEII | GGTNACC | 1 cut(s) | 3104 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1840 |
| BstFNI | CGCG | 9 cut(s) | 38, 143, 423, 425, 892, 3990, 4789, 5916, 7078 |
| BstH2I | RGCGCY | 2 cut(s) | 602, 7429 |
| BstHHI | GCGC | 9 cut(s) | 145, 423, 425, 601, 1875, 5918, 6695, 7078, 7428 |
| BstMCI | CGRYCG | 1 cut(s) | 219 |
| BstNI | CCWGG | 8 cut(s) | 32, 1003, 1397, 1770, 1837, 2763, 6364, 7379 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 137 |
| BstPI | GGTNACC | 1 cut(s) | 3104 |
| BstSLI | GKGCMC | 3 cut(s) | 5233, 5551, 6277 |
| BstSNI | TACGTA | 1 cut(s) | 4256 |
| BstUI | CGCG | 9 cut(s) | 38, 143, 423, 425, 892, 3990, 4789, 5916, 7078 |
| BstV2I | GAAGAC | 8 cut(s) | 1163, 2207, 2281, 2348, 2560, 4955, 5235, 5450 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 4992 |
| BstZ17I | GTATAC | 1 cut(s) | 6771 |
| Bsu15I | ATCGAT | 1 cut(s) | 7085 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1200, 4620 |
| BsuI | GTATCC | 5 cut(s) | 442, 1309, 3334, 3873, 5420 |
| BsuTUI | ATCGAT | 1 cut(s) | 7085 |
| BtgI | CCRYGG | 4 cut(s) | 1407, 4836, 4991, 5400 |
| BtgZI | GCGATG | 2 cut(s) | 70, 2468 |
| BtsI | GCAGTG | 3 cut(s) | 481, 2484, 3766 |
| BveI | ACCTGC | 1 cut(s) | 5277 |
| CaiI | CAGNNNCTG | 5 cut(s) | 316, 1396, 4019, 4091, 4322 |
| CciI | TCATGA | 2 cut(s) | 2022, 6373 |
| CfoI | GCGC | 9 cut(s) | 145, 423, 425, 601, 1875, 5918, 6695, 7078, 7428 |
| Cfr10I | RCCGGY | 4 cut(s) | 153, 193, 3630, 4725 |
| ClaI | ATCGAT | 1 cut(s) | 7085 |
| CseI | GACGC | 6 cut(s) | 234, 2342, 5380, 5731, 5831, 5922 |
| CsiI | ACCWGGT | 1 cut(s) | 7377 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1448, 1483 |
| DinI | GGCGCC | 1 cut(s) | 600 |
| DraI | TTTAAA | 3 cut(s) | 2832, 3085, 3870 |
| DraIII | CACNNNGTG | 1 cut(s) | 4473 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 5117 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 5117 |
| EaeI | YGGCCR | 2 cut(s) | 33, 151 |
| EciI | GGCGGA | 1 cut(s) | 6210 |
| Ecl136II | GAGCTC | 4 cut(s) | 112, 226, 2103, 5658 |
| Eco105I | TACGTA | 1 cut(s) | 4256 |
| Eco130I | CCWWGG | 9 cut(s) | 1407, 2652, 3387, 3783, 4075, 4097, 4836, 4991, 5400 |
| Eco24I | GRGCYC | 6 cut(s) | 100, 114, 228, 2105, 5305, 5660 |
| Eco32I | GATATC | 1 cut(s) | 1181 |
| Eco53kI | GAGCTC | 4 cut(s) | 112, 226, 2103, 5658 |
| Eco81I | CCTNAGG | 2 cut(s) | 1200, 4620 |
| Eco88I | CYCGRG | 2 cut(s) | 107, 5170 |
| Eco91I | GGTNACC | 1 cut(s) | 3104 |
| EcoICRI | GAGCTC | 4 cut(s) | 112, 226, 2103, 5658 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1840 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2648 |
| EcoO65I | GGTNACC | 1 cut(s) | 3104 |
| EcoRI | GAATTC | 5 cut(s) | 1624, 2838, 2933, 7250, 7331 |
| EcoRII | CCWGG | 8 cut(s) | 30, 1001, 1395, 1768, 1835, 2761, 6362, 7377 |
| EcoRV | GATATC | 1 cut(s) | 1181 |
| EcoT14I | CCWWGG | 9 cut(s) | 1407, 2652, 3387, 3783, 4075, 4097, 4836, 4991, 5400 |
| EcoT22I | ATGCAT | 7 cut(s) | 4434, 4524, 5683, 6091, 6313, 6538, 6542 |
| EcoT38I | GRGCYC | 6 cut(s) | 100, 114, 228, 2105, 5305, 5660 |
| EgeI | GGCGCC | 1 cut(s) | 600 |
| EheI | GGCGCC | 1 cut(s) | 600 |
| ErhI | CCWWGG | 9 cut(s) | 1407, 2652, 3387, 3783, 4075, 4097, 4836, 4991, 5400 |
| Esp3I | CGTCTC | 3 cut(s) | 1932, 5714, 7442 |
| FauI | CCCGC | 4 cut(s) | 35, 279, 6753, 7071 |
| FauNDI | CATATG | 4 cut(s) | 2055, 2982, 4355, 4524 |
| FbaI | TGATCA | 2 cut(s) | 1216, 3844 |
| FblI | GTMKAC | 2 cut(s) | 215, 6770 |
| FriOI | GRGCYC | 6 cut(s) | 100, 114, 228, 2105, 5305, 5660 |
| GlaI | GCGC | 9 cut(s) | 144, 422, 424, 600, 1874, 5917, 6694, 7077, 7427 |
| GsaI | CCCAGC | 2 cut(s) | 1191, 2719 |
| GsuI | CTGGAG | 4 cut(s) | 113, 1654, 2865, 3486 |
| HaeII | RGCGCY | 2 cut(s) | 602, 7429 |
| HgaI | GACGC | 6 cut(s) | 234, 2342, 5380, 5731, 5831, 5922 |
| HhaI | GCGC | 9 cut(s) | 145, 423, 425, 601, 1875, 5918, 6695, 7078, 7428 |
| Hin1I | GRCGYC | 2 cut(s) | 599, 5372 |
| Hin6I | GCGC | 9 cut(s) | 143, 421, 423, 599, 1873, 5916, 6693, 7076, 7426 |
| HinP1I | GCGC | 9 cut(s) | 143, 421, 423, 599, 1873, 5916, 6693, 7076, 7426 |
| HincII | GTYRAC | 6 cut(s) | 216, 2223, 3331, 6466, 7322, 7452 |
| HindII | GTYRAC | 6 cut(s) | 216, 2223, 3331, 6466, 7322, 7452 |
| HindIII | AAGCTT | 2 cut(s) | 4782, 7001 |
| HphI | GGTGA | 8 cut(s) | 763, 881, 1943, 2916, 3116, 5021, 5510, 5525 |
| Hpy99I | CGWCG | 5 cut(s) | 143, 193, 224, 250, 253 |
| HpyCH4IV | ACGT | 9 cut(s) | 165, 1168, 2251, 2374, 2410, 4255, 4807, 5455, 6321 |
| HpySE526I | ACGT | 9 cut(s) | 165, 1168, 2251, 2374, 2410, 4255, 4807, 5455, 6321 |
| Hsp92I | GRCGYC | 2 cut(s) | 599, 5372 |
| HspAI | GCGC | 9 cut(s) | 143, 421, 423, 599, 1873, 5916, 6693, 7076, 7426 |
| KasI | GGCGCC | 1 cut(s) | 598 |
| Kpn2I | TCCGGA | 1 cut(s) | 2869 |
| KroI | GCCGGC | 2 cut(s) | 193, 4725 |
| KroNI | GCCGGC | 2 cut(s) | 195, 4727 |
| Ksp22I | TGATCA | 2 cut(s) | 1216, 3844 |
| LguI | GCTCTTC | 2 cut(s) | 411, 2110 |
| MabI | ACCWGGT | 1 cut(s) | 7377 |
| MaeII | ACGT | 9 cut(s) | 165, 1168, 2251, 2374, 2410, 4255, 4807, 5455, 6321 |
| MbiI | CCGCTC | 2 cut(s) | 70, 1046 |
| MfeI | CAATTG | 6 cut(s) | 1815, 2301, 3315, 5666, 6890, 7356 |
| Mly113I | GGCGCC | 1 cut(s) | 599 |
| MlyI | GAGTC | 4 cut(s) | 572, 4019, 4100, 5993 |
| MmeI | TCCRAC | 7 cut(s) | 414, 498, 668, 3175, 3831, 3887, 6181 |
| Mph1103I | ATGCAT | 7 cut(s) | 4434, 4524, 5683, 6091, 6313, 6538, 6542 |
| MroI | TCCGGA | 1 cut(s) | 2869 |
| MroNI | GCCGGC | 2 cut(s) | 193, 4725 |
| MroXI | GAANNNNTTC | 6 cut(s) | 350, 1170, 4918, 5359, 5457, 5520 |
| MspA1I | CMGCKG | 9 cut(s) | 1892, 3437, 4479, 4584, 4664, 5075, 6239, 6776, 7265 |
| MunI | CAATTG | 6 cut(s) | 1815, 2301, 3315, 5666, 6890, 7356 |
| Mva1269I | GAATGC | 5 cut(s) | 3540, 5683, 6091, 7508, 7585 |
| MvaI | CCWGG | 8 cut(s) | 32, 1003, 1397, 1770, 1837, 2763, 6364, 7379 |
| MvnI | CGCG | 9 cut(s) | 38, 143, 423, 425, 892, 3990, 4789, 5916, 7078 |
| NaeI | GCCGGC | 2 cut(s) | 195, 4727 |
| NarI | GGCGCC | 1 cut(s) | 599 |
| NciI | CCSGG | 3 cut(s) | 74, 546, 3648 |
| NcoI | CCATGG | 4 cut(s) | 1407, 4836, 4991, 5400 |
| NdeI | CATATG | 4 cut(s) | 2055, 2982, 4355, 4524 |
| NgoMIV | GCCGGC | 2 cut(s) | 193, 4725 |
| NheI | GCTAGC | 1 cut(s) | 1358 |
| NlaIV | GGNNCC | 9 cut(s) | 600, 1042, 2650, 2785, 2868, 3807, 5304, 6655, 7376 |
| NmeAIII | GCCGAG | 2 cut(s) | 316, 4918 |
| NmuCI | GTSAC | 6 cut(s) | 1007, 1479, 1999, 2893, 3104, 7006 |
| NsiI | ATGCAT | 7 cut(s) | 4434, 4524, 5683, 6091, 6313, 6538, 6542 |
| NspV | TTCGAA | 1 cut(s) | 414 |
| PaeI | GCATGC | 5 cut(s) | 1810, 2446, 6540, 6544, 7577 |
| PagI | TCATGA | 2 cut(s) | 2022, 6373 |
| PauI | GCGCGC | 1 cut(s) | 421 |
| PciI | ACATGT | 5 cut(s) | 1263, 1294, 2147, 7446, 7626 |
| PciSI | GCTCTTC | 2 cut(s) | 411, 2110 |
| PcsI | WCGNNNNNNNCGW | 5 cut(s) | 60, 120, 1710, 4252, 6355 |
| PctI | GAATGC | 5 cut(s) | 3540, 5683, 6091, 7508, 7585 |
| PdiI | GCCGGC | 2 cut(s) | 195, 4727 |
| PdmI | GAANNNNTTC | 6 cut(s) | 350, 1170, 4918, 5359, 5457, 5520 |
| PflFI | GACNNNGTC | 1 cut(s) | 7379 |
| PflMI | CCANNNNNTGG | 4 cut(s) | 1413, 2793, 3521, 7384 |
| PfoI | TCCNGGA | 1 cut(s) | 2761 |
| PleI | GAGTC | 4 cut(s) | 571, 4018, 4100, 5992 |
| PluTI | GGCGCC | 1 cut(s) | 602 |
| PpsI | GAGTC | 4 cut(s) | 571, 4018, 4100, 5992 |
| Ppu21I | YACGTR | 4 cut(s) | 2252, 2411, 4256, 4808 |
| PpuMI | RGGWCCY | 1 cut(s) | 2648 |
| PscI | ACATGT | 5 cut(s) | 1263, 1294, 2147, 7446, 7626 |
| PshAI | GACNNNNGTC | 1 cut(s) | 137 |
| PshBI | ATTAAT | 2 cut(s) | 1454, 7398 |
| PsiI | TTATAA | 1 cut(s) | 6528 |
| Psp124BI | GAGCTC | 4 cut(s) | 114, 228, 2105, 5660 |
| Psp1406I | AACGTT | 1 cut(s) | 165 |
| Psp5II | RGGWCCY | 1 cut(s) | 2648 |
| Psp6I | CCWGG | 8 cut(s) | 30, 1001, 1395, 1768, 1835, 2761, 6362, 7377 |
| PspEI | GGTNACC | 1 cut(s) | 3104 |
| PspFI | CCCAGC | 2 cut(s) | 1187, 2715 |
| PspGI | CCWGG | 8 cut(s) | 30, 1001, 1395, 1768, 1835, 2761, 6362, 7377 |
| PspN4I | GGNNCC | 9 cut(s) | 600, 1042, 2650, 2785, 2868, 3807, 5304, 6655, 7376 |
| PspPPI | RGGWCCY | 1 cut(s) | 2648 |
| PstI | CTGCAG | 6 cut(s) | 1441, 1983, 2503, 3804, 4542, 4753 |
| PstNI | CAGNNNCTG | 5 cut(s) | 316, 1396, 4019, 4091, 4322 |
| PsyI | GACNNNGTC | 1 cut(s) | 7379 |
| PteI | GCGCGC | 1 cut(s) | 421 |
| PvuII | CAGCTG | 8 cut(s) | 1892, 3437, 4479, 4584, 5075, 6239, 6776, 7265 |
| SacI | GAGCTC | 4 cut(s) | 114, 228, 2105, 5660 |
| SalI | GTCGAC | 1 cut(s) | 214 |
| SapI | GCTCTTC | 2 cut(s) | 411, 2110 |
| SchI | GAGTC | 4 cut(s) | 572, 4019, 4100, 5993 |
| SexAI | ACCWGGT | 1 cut(s) | 7377 |
| SfoI | GGCGCC | 1 cut(s) | 600 |
| SfuI | TTCGAA | 1 cut(s) | 414 |
| SmlI | CTYRAG | 6 cut(s) | 962, 2736, 3775, 4421, 5039, 6191 |
| SmoI | CTYRAG | 6 cut(s) | 962, 2736, 3775, 4421, 5039, 6191 |
| SnaBI | TACGTA | 1 cut(s) | 4256 |
| SphI | GCATGC | 5 cut(s) | 1810, 2446, 6540, 6544, 7577 |
| SspDI | GGCGCC | 1 cut(s) | 598 |
| SspI | AATATT | 2 cut(s) | 1366, 2202 |
| SstI | GAGCTC | 4 cut(s) | 114, 228, 2105, 5660 |
| StyI | CCWWGG | 9 cut(s) | 1407, 2652, 3387, 3783, 4075, 4097, 4836, 4991, 5400 |
| TaiI | ACGT | 9 cut(s) | 168, 1171, 2254, 2377, 2413, 4258, 4810, 5458, 6324 |
| TaqII | GACCGA | 1 cut(s) | 4302 |
| TatI | WGTACW | 9 cut(s) | 1125, 2790, 3740, 3750, 4324, 5728, 6162, 6327, 7623 |
| TauI | GCSGC | 8 cut(s) | 38, 70, 1046, 2338, 2417, 3013, 5330, 6782 |
| TseFI | GTSAC | 6 cut(s) | 1007, 1479, 1999, 2893, 3104, 7006 |
| Tsp45I | GTSAC | 6 cut(s) | 1007, 1479, 1999, 2893, 3104, 7006 |
| TspGWI | ACGGA | 6 cut(s) | 177, 2208, 3153, 3348, 3353, 5990 |
| Tth111I | GACNNNGTC | 1 cut(s) | 7379 |
| Van91I | CCANNNNNTGG | 4 cut(s) | 1413, 2793, 3521, 7384 |
| VneI | GTGCAC | 2 cut(s) | 5229, 6273 |
| VspI | ATTAAT | 2 cut(s) | 1454, 7398 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1840 |
| XbaI | TCTAGA | 2 cut(s) | 1882, 5962 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 6869 |
| XmiI | GTMKAC | 2 cut(s) | 215, 6770 |
| XmnI | GAANNNNTTC | 6 cut(s) | 350, 1170, 4918, 5359, 5457, 5520 |
| Zsp2I | ATGCAT | 7 cut(s) | 4434, 4524, 5683, 6091, 6313, 6538, 6542 |