Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0009656

Physical Location & Seq

Genomic Coordinates Forward (+)

23948639 .. 23954889

Gene Structure 6251 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g31120.t4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2418 bp

ATGGCGGTCCAGTTCAAATTCCGAAGCGCCATGAAATTCGACTCCGTCGACCTCGAAGGTCGGTCCTCAATCTCCGTCCGCGATCTCAAAGCCAAAATCATCCGCCACAAAAACCTCAACCTCTGTCAAGATTCCGATCTCCTCTTCTCCGACGCCGTGACCGGTCAAGAGTATAGTAACGAGAACATTCAAATTCCATGCGGCTCGTCCGTGATTATCAAGAGAGTTCCTGCTGGATCTGTTCATGTGGATATGCCTCAATTCAACTGCAAGGACACTGAGAATCCGCCGAATATTGAGACGGTTGACTTTGATGACTTTGGGGTTGACGTGTATCCTGTTCCCGAGGCAACGTTCTTCCGTTCTGGTTTGGATGCCGACAAGGATGCCTGCAGTCCGGGTTATGAAGCAAATACTGGCATCACACGATGTTTGGAGCCAGCGGCAGGAGAATTTCAGAAACTTGAAGCAAGTGGGACTAGTGATGCTATTCCAGGAAGTCATTTGCATGGTGGAGTTGAACATACTATACCACAGACAAAGTCAAAGCCTGAGGTTCAAAAAGACTTTAATCCGGAAAAGATGAGTCGCAATCCTGTAGATACAAAAAATGCTGACATGCCATCAGAGATGAAATGCCCCCTATGCAACTCGTTGTTCAAGGAGGCTGTGATGATACCCTGCTGCCAGCACAGTTTTTGTGAGAAATGCATTCGCCAAGTGTTGCTTGAGAAGGCAAGATGTCCGAAGTGTTTTTCAACCAAGTGCAGAATTGAAGATCTGCTACCAAATATATCTCTTAGGCAAGCAATAGAGCATTTTCAAGAGTCTCAAAATATCATCACTGTTCCAGATAATGGTTTTTGCCAATATGCTCCAGATGGAGAATCGGGGATTCAGGCAAAAGATGTCTCTTATGGTGGTAGTATTTTTCAAAGGGAGTCAGGGTTACCTCACTCTCCTGACACTGGGATAGGATCTAATAATTGCTTAGCAGAATCTAATGATGCACCGTATCAATTTGGTCCGAGAAACAAGCATAAATTTCCTTCTTTGCACAAGAACAATCAAATTGATGGAGAGAGATATGGTTCTACTCATGTGGCTCCATATGGTTCGGCAGCATTTGATGATTTTCAAGGGGAAAGCAAGCCTATACCTGAGAAAGCTGAACCTGTAATCAAGAAAAAGAGGCCACCTTGGGTTTTTACTGCAGGTGGTGGAAAAAGTTTTATGGAGAGTGGGAGGAACGGAAAGGGGGATCGGGCTTGTTATATGTGTGGCTCCCCTGACCATTTAATAAGAGAATGTCCAGTTGCTACCAGTCCACGCCCTTTGCTTCATACAGGAAATGCAATCTTTCCAGGAGCTATGCCAGGTTATGCACCACCTTACTGGAATGGGGCTGCATTGCCTCGTGCCCCGCCCTTTAGGAATCTATATGGAAATTATGGGATGACAGCTTTTGATAACATGCCGATCCATCCCACTCCTTTTTCTGTTTATCCATACATGCACATGACATCCATGTATAGAGGGATTCCAGGCTTTGGTGGATATATGGGGATGGGAGGTGTAGCCCCTTTTCCCGAAAATGGTGAAAACTGTTATACAAGTCGGTCAGAGTTTCCAGATCTTGAAGGTCAACAAAAGAGGAGAAAACTTTCGAAGGAGAAATTTAGGAGAGATCAATCTTGTGATGACGATGAAGACTGGGGGAGGCAACAATATAATGGGACTGCAAGATTGCAAGAGCATAAATCTTTTGTTAACAGGGAAAAGAGTGTAAGCTACTCCAGTGACGGCTCTACTAAAAGGTCCCAGAGACAAGACCGCCATCATAATGAGATAGATGATGCCAACATACATTTGGTTGATGGTCATCAAAAGAGTTCTGGTTTGGTGGTTGGTCATAGGGAGGGGAAACTGTATGATCGCAGGGAGAAATCAAGTTCTGAAATAGATGATATGCCAAGTAGCTCCAGTTGGCACAGTGAAGAGAAACACAAACATTATCATAGAAGTTCAAGAAAGAAAAATGAAACAAGGGAGCAGTGTGACAGTGATAAACACAAACACTATCATAAAAGCTCCAGATATCAAAAGGAAAGAAGAGAGCAGTGTAATAGTGATTCTAGTTGGAGTCATCATCAAAATATCAGTGAGAAGGATGATAAGATAAAGAGAACTCAGCATGATTTCAAAAGACAGAAACATCACAGTAACACTGGATCTGGTTTAGGACACAGTGTTTCCAGTGATAAGAAGAAAGGGAGCAGTCGTGATTTTAGAAAGTCTGAGCACAGTGCAAAGTCTAGTGTTAATGAGGGGAGTCATGACAGGTGGAAAATGGTTAGTGGGTCAGATGAAGATCACACAGAAGATTATCGGTATTGTAAACGGAAAAGGGTAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001701 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006275 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006974 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009790 GO:0009792 GO:0009888 GO:0009889 GO:0009987 GO:0010556 GO:0016567 GO:0016604 GO:0016607 GO:0016740 GO:0019219 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0019900 GO:0019901 GO:0019941 GO:0030163 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032446 GO:0032501 GO:0032502 GO:0032991 GO:0033554 GO:0035264 GO:0036211 GO:0040007 GO:0043009 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0048513 GO:0048568 GO:0048589 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051171 GO:0051603 GO:0051716 GO:0060255 GO:0060429 GO:0061053 GO:0061630 GO:0061659 GO:0065007 GO:0070013 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:2000112

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DWNN zf-C3HC4_2 zf-CCHC

Protein Analysis

806

Amino Acids

90.68

Weight (kDa)

8.16

Isoelectric Point (pI)

57.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DWNN	PF08783	3 - 77	7.4e-20	DWNN domain
zf-C3HC4_2	PF13923	212 - 251	4.9e-09	Zinc finger, C3HC4 type (RING finger)
zf-C3HC4	PF00097	213 - 251	5.9e-06	Zinc finger, C3HC4 type (RING finger)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009656)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g31120 FvH4_2g31120 FvH4_2g31120 FvH4_2g31120 FvH4_2g31120 FvH4_2g31120
malus_domestica	MD08G1070600.v1.1 MD15G1051500.v1.1
prunus_persica	Prupe.1G405500_v2.0.a1 Prupe.1G405500_v2.0.a1 Prupe.1G405500_v2.0.a1
pyrus_communis	pycom08g05840 pycom15g04930
rosa_chinensis	RchiOBHm_Chr6g0311661
rosa_laevigata	RLG00000010383
rosa_roxburghii	Rroxscaffold_7G00157400
rosa_rugosa	Rorug06G0390500.1
rosa_samantha	Rh6AG505800 Rh6BG516600 Rh6CG522500 Rh6DG508200
rosa_wichuraiana	Rw6G044020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1205
Acc36I	ACCTGC	1 cut(s)	1205
AccB7I	CCANNNNNTGG	2 cut(s)	857, 1550
AccI	GTMKAC	1 cut(s)	48
AccII	CGCG	1 cut(s)	81
AccIII	TCCGGA	1 cut(s)	574
AciI	CCGC	8 cut(s)	5, 79, 103, 201, 287, 443, 1424, 1834
AclI	AACGTT	1 cut(s)	353
AclWI	GGATC	5 cut(s)	244, 985, 1269, 1474, 2239
AcsI	RAATTY	6 cut(s)	17, 35, 192, 452, 1043, 1676
AcyI	GRCGYC	1 cut(s)	153
AfiI	CCNNNNNNNGG	5 cut(s)	446, 857, 968, 1550, 1595
AflIII	ACRYGT	1 cut(s)	330
AgeI	ACCGGT	1 cut(s)	161
AhlI	ACTAGT	1 cut(s)	479
AjiI	CACGTC	1 cut(s)	331
AjnI	CCWGG	4 cut(s)	493, 1363, 1375, 1543
AluBI	AGCT	6 cut(s)	1169, 1370, 1463, 1791, 1980, 2091
AluI	AGCT	6 cut(s)	1169, 1370, 1463, 1791, 1980, 2091
Alw21I	GWGCWC	1 cut(s)	2304
Alw26I	GTCTC	4 cut(s)	293, 834, 916, 1819
AlwI	GGATC	5 cut(s)	244, 985, 1269, 1474, 2239
Ama87I	CYCGRG	1 cut(s)	344
Aor13HI	TCCGGA	1 cut(s)	574
AoxI	GGCC	1 cut(s)	1193
ApeKI	GCWGC	3 cut(s)	684, 1121, 1406
ApoI	RAATTY	6 cut(s)	17, 35, 192, 452, 1043, 1676
AsiGI	ACCGGT	1 cut(s)	161
Asp700I	GAANNNNTTC	1 cut(s)	1663
AspLEI	GCGC	1 cut(s)	29
AspS9I	GGNCC	4 cut(s)	7, 63, 1025, 1818
AsuC2I	CCSGG	1 cut(s)	399
AsuHPI	GGTGA	1 cut(s)	1610
AsuII	TTCGAA	1 cut(s)	1667
AvaI	CYCGRG	1 cut(s)	344
AvaII	GGWCC	4 cut(s)	7, 63, 1025, 1818
AxyI	CCTNAGG	1 cut(s)	552
BaeGI	GKGCMC	1 cut(s)	1423
BarI	GAAGNNNNNNTAC	2 cut(s)	768, 800
BauI	CACGAG	1 cut(s)	1416
BbsI	GAAGAC	1 cut(s)	1716
Bbv12I	GWGCWC	1 cut(s)	2304
BbvI	GCAGC	3 cut(s)	671, 1133, 1393
BccI	CCATC	7 cut(s)	631, 875, 1070, 1491, 1561, 1845, 1871
BceAI	ACGGC	2 cut(s)	140, 1819
BcgI	CGANNNNNNTGC	2 cut(s)	368, 402
BciT130I	CCWGG	4 cut(s)	495, 1365, 1377, 1545
BciVI	GTATCC	1 cut(s)	345
BcnI	CCSGG	1 cut(s)	399
BcoDI	GTCTC	4 cut(s)	293, 834, 916, 1819
BcuI	ACTAGT	1 cut(s)	479
BfaI	CTAG	3 cut(s)	480, 2136, 2316
BfmI	CTRYAG	3 cut(s)	391, 597, 1212
BfoI	RGCGCY	1 cut(s)	30
BfuAI	ACCTGC	1 cut(s)	1205
BfuI	GTATCC	1 cut(s)	345
BglII	AGATCT	2 cut(s)	778, 1633
BisI	GCNGC	5 cut(s)	202, 444, 685, 1122, 1407
BlpI	GCTNAGC	1 cut(s)	991
BlsI	GCNGC	5 cut(s)	203, 445, 686, 1123, 1408
Bme1390I	CCNGG	5 cut(s)	399, 495, 1365, 1377, 1545
Bme18I	GGWCC	4 cut(s)	7, 63, 1025, 1818
BmeT110I	CYCGRG	1 cut(s)	344
BmgBI	CACGTC	1 cut(s)	331
BmgT120I	GGNCC	4 cut(s)	7, 63, 1025, 1818
BmiI	GGNNCC	4 cut(s)	438, 1107, 1285, 1820
BmrFI	CCNGG	5 cut(s)	399, 495, 1365, 1377, 1545
BmrI	ACTGGG	2 cut(s)	978, 1723
BmsI	GCATC	6 cut(s)	364, 376, 429, 475, 997, 1846
BmuI	ACTGGG	2 cut(s)	978, 1723
BpiI	GAAGAC	1 cut(s)	1716
BpmI	CTGGAG	4 cut(s)	861, 1780, 1966, 2077
Bpu1102I	GCTNAGC	1 cut(s)	991
Bpu14I	TTCGAA	1 cut(s)	1667
BpuEI	CTTGAG	1 cut(s)	749
BpuMI	CCSGG	1 cut(s)	399
BsaBI	GATNNNNATC	3 cut(s)	135, 1881, 2370
BsaHI	GRCGYC	1 cut(s)	153
BsaJI	CCNNGG	2 cut(s)	345, 1199
BsaWI	WCCGGW	2 cut(s)	161, 574
BsaXI	ACNNNNNCTCC	4 cut(s)	932, 962, 2266, 2296
Bsc4I	CCNNNNNNNGG	5 cut(s)	446, 857, 968, 1550, 1595
Bse118I	RCCGGY	1 cut(s)	161
Bse21I	CCTNAGG	1 cut(s)	552
Bse3DI	GCAATG	1 cut(s)	1409
Bse8I	GATNNNNATC	3 cut(s)	135, 1881, 2370
BseAI	TCCGGA	1 cut(s)	574
BseBI	CCWGG	4 cut(s)	495, 1365, 1377, 1545
BseDI	CCNNGG	2 cut(s)	345, 1199
BseGI	GGATG	8 cut(s)	99, 379, 391, 1461, 1483, 1523, 1572, 2176
BseJI	GATNNNNATC	3 cut(s)	135, 1881, 2370
BseLI	CCNNNNNNNGG	5 cut(s)	446, 857, 968, 1550, 1595
BseMI	GCAATG	1 cut(s)	1409
BseMII	CTCAG	5 cut(s)	270, 543, 1152, 2204, 2289
BseRI	GAGGAG	2 cut(s)	131, 1669
BseSI	GKGCMC	1 cut(s)	1423
BseXI	GCAGC	3 cut(s)	671, 1133, 1393
BsgI	GTGCAG	1 cut(s)	787
Bsh1236I	CGCG	1 cut(s)	81
BshFI	GGCC	1 cut(s)	1195
BshTI	ACCGGT	1 cut(s)	161
BsiHKAI	GWGCWC	1 cut(s)	2304
BsiHKCI	CYCGRG	1 cut(s)	344
BsiSI	CCGG	3 cut(s)	162, 398, 575
BslFI	GGGAC	3 cut(s)	490, 1750, 1804
BslI	CCNNNNNNNGG	5 cut(s)	446, 857, 968, 1550, 1595
BsmAI	GTCTC	4 cut(s)	293, 834, 916, 1819
BsmBI	CGTCTC	1 cut(s)	293
BsmFI	GGGAC	3 cut(s)	490, 1750, 1804
BsmI	GAATGC	1 cut(s)	711
BsnI	GGCC	1 cut(s)	1195
BsoBI	CYCGRG	1 cut(s)	344
Bsp119I	TTCGAA	1 cut(s)	1667
Bsp1286I	GDGCHC	2 cut(s)	1423, 2304
Bsp13I	TCCGGA	1 cut(s)	574
Bsp1720I	GCTNAGC	1 cut(s)	991
BspACI	CCGC	8 cut(s)	5, 79, 103, 201, 287, 443, 1424, 1834
BspANI	GGCC	1 cut(s)	1195
BspCNI	CTCAG	5 cut(s)	271, 544, 1153, 2203, 2290
BspEI	TCCGGA	1 cut(s)	574
BspFNI	CGCG	1 cut(s)	81
BspHI	TCATGA	1 cut(s)	2335
BspLI	GGNNCC	4 cut(s)	438, 1107, 1285, 1820
BspMAI	CTGCAG	2 cut(s)	395, 1216
BspMI	ACCTGC	1 cut(s)	1205
BspPI	GGATC	5 cut(s)	244, 985, 1269, 1474, 2239
BspT104I	TTCGAA	1 cut(s)	1667
BsrDI	GCAATG	1 cut(s)	1409
BsrFI	RCCGGY	1 cut(s)	161
BssAI	RCCGGY	1 cut(s)	161
BssECI	CCNNGG	2 cut(s)	345, 1199
BssNI	GRCGYC	1 cut(s)	153
BssSI	CACGAG	1 cut(s)	1416
BssT1I	CCWWGG	1 cut(s)	1199
Bst2BI	CACGAG	1 cut(s)	1416
Bst2UI	CCWGG	4 cut(s)	495, 1365, 1377, 1545
Bst6I	CTCTTC	3 cut(s)	149, 1992, 2107
BstACI	GRCGYC	1 cut(s)	153
BstBI	TTCGAA	1 cut(s)	1667
BstC8I	GCNNGC	5 cut(s)	391, 441, 689, 807, 1151
BstDEI	CTNAG	7 cut(s)	279, 552, 800, 991, 1161, 2190, 2298
BstEII	GGTNACC	1 cut(s)	948
BstF5I	GGATG	8 cut(s)	99, 379, 391, 1461, 1483, 1523, 1572, 2176
BstFNI	CGCG	1 cut(s)	81
BstH2I	RGCGCY	1 cut(s)	30
BstHHI	GCGC	1 cut(s)	29
BstMAI	GTCTC	4 cut(s)	293, 834, 916, 1819
BstMWI	GCNNNNNNNGC	1 cut(s)	645
BstNI	CCWGG	4 cut(s)	495, 1365, 1377, 1545
BstNSI	RCATGY	3 cut(s)	622, 1477, 1516
BstPI	GGTNACC	1 cut(s)	948
BstSCI	CCNGG	5 cut(s)	397, 493, 1363, 1375, 1543
BstSFI	CTRYAG	3 cut(s)	391, 597, 1212
BstSLI	GKGCMC	1 cut(s)	1423
BstUI	CGCG	1 cut(s)	81
BstV1I	GCAGC	3 cut(s)	671, 1133, 1393
BstV2I	GAAGAC	1 cut(s)	1716
BstX2I	RGATCY	5 cut(s)	236, 778, 977, 1633, 2231
BstXI	CCANNNNNNTGG	1 cut(s)	1395
BstYI	RGATCY	5 cut(s)	236, 778, 977, 1633, 2231
Bsu36I	CCTNAGG	1 cut(s)	552
BsuI	GTATCC	1 cut(s)	345
BsuRI	GGCC	1 cut(s)	1195
BtrI	CACGTC	1 cut(s)	331
BtsCI	GGATG	8 cut(s)	99, 379, 391, 1461, 1483, 1523, 1572, 2176
BtsI	GCAGTG	2 cut(s)	2060, 2126
BveI	ACCTGC	1 cut(s)	1205
Cac8I	GCNNGC	5 cut(s)	391, 441, 689, 807, 1151
CciI	TCATGA	1 cut(s)	2335
CfoI	GCGC	1 cut(s)	29
Cfr10I	RCCGGY	1 cut(s)	161
Cfr13I	GGNCC	4 cut(s)	7, 63, 1025, 1818
CseI	GACGC	1 cut(s)	161
CspAI	ACCGGT	1 cut(s)	161
CspCI	CAANNNNNGTGG	2 cut(s)	1317, 1352
DdeI	CTNAG	7 cut(s)	279, 552, 800, 991, 1161, 2190, 2298
Eam1104I	CTCTTC	3 cut(s)	149, 1992, 2107
EarI	CTCTTC	3 cut(s)	149, 1992, 2107
EciI	GGCGGA	2 cut(s)	92, 276
Eco130I	CCWWGG	1 cut(s)	1199
Eco32I	GATATC	1 cut(s)	2099
Eco47I	GGWCC	4 cut(s)	7, 63, 1025, 1818
Eco81I	CCTNAGG	1 cut(s)	552
Eco88I	CYCGRG	1 cut(s)	344
Eco91I	GGTNACC	1 cut(s)	948
EcoO109I	RGGNCCY	1 cut(s)	1818
EcoO65I	GGTNACC	1 cut(s)	948
EcoRII	CCWGG	4 cut(s)	493, 1363, 1375, 1543
EcoRV	GATATC	1 cut(s)	2099
EcoT14I	CCWWGG	1 cut(s)	1199
EcoT22I	ATGCAT	1 cut(s)	713
ErhI	CCWWGG	1 cut(s)	1199
Esp3I	CGTCTC	1 cut(s)	293
FalI	AAGNNNNNCTT	2 cut(s)	711, 743
FaqI	GGGAC	3 cut(s)	490, 1750, 1804
FauI	CCCGC	1 cut(s)	1431
FauNDI	CATATG	1 cut(s)	1111
FblI	GTMKAC	1 cut(s)	48
Fnu4HI	GCNGC	5 cut(s)	202, 444, 685, 1122, 1407
FokI	GGATG	8 cut(s)	86, 386, 398, 1468, 1470, 1510, 1579, 2183
Fsp4HI	GCNGC	5 cut(s)	202, 444, 685, 1122, 1407
FspBI	CTAG	3 cut(s)	480, 2136, 2316
GlaI	GCGC	1 cut(s)	28
GluI	GCNGC	5 cut(s)	202, 444, 685, 1122, 1407
GsuI	CTGGAG	4 cut(s)	861, 1780, 1966, 2077
HaeII	RGCGCY	1 cut(s)	30
HaeIII	GGCC	1 cut(s)	1195
HapII	CCGG	3 cut(s)	162, 398, 575
HgaI	GACGC	1 cut(s)	161
HhaI	GCGC	1 cut(s)	29
Hin1I	GRCGYC	1 cut(s)	153
Hin6I	GCGC	1 cut(s)	27
HinP1I	GCGC	1 cut(s)	27
HincII	GTYRAC	5 cut(s)	49, 307, 328, 1646, 1771
HindII	GTYRAC	5 cut(s)	49, 307, 328, 1646, 1771
HpaI	GTTAAC	1 cut(s)	1771
HpaII	CCGG	3 cut(s)	162, 398, 575
HphI	GGTGA	1 cut(s)	1610
Hpy166II	GTNNAC	7 cut(s)	49, 307, 328, 1328, 1646, 1771, 2399
Hpy8I	GTNNAC	7 cut(s)	49, 307, 328, 1328, 1646, 1771, 2399
Hpy99I	CGWCG	2 cut(s)	50, 155
HpyAV	CCTTC	6 cut(s)	50, 727, 1059, 1634, 1663, 2161
HpyCH4IV	ACGT	2 cut(s)	330, 353
HpyF10VI	GCNNNNNNNGC	1 cut(s)	645
HpyF3I	CTNAG	7 cut(s)	279, 552, 800, 991, 1161, 2190, 2298
HpySE526I	ACGT	2 cut(s)	330, 353
Hsp92I	GRCGYC	1 cut(s)	153
HspAI	GCGC	1 cut(s)	27
Kpn2I	TCCGGA	1 cut(s)	574
KspAI	GTTAAC	1 cut(s)	1771
LmnI	GCTCC	9 cut(s)	436, 880, 1111, 1289, 1367, 1985, 2050, 2096, 2274
Lsp1109I	GCAGC	3 cut(s)	671, 1133, 1393
LweI	GCATC	6 cut(s)	364, 376, 429, 475, 997, 1846
MaeI	CTAG	3 cut(s)	480, 2136, 2316
MaeII	ACGT	2 cut(s)	330, 353
MaeIII	GTNAC	6 cut(s)	157, 176, 948, 1799, 2057, 2222
MboII	GAAGA	9 cut(s)	136, 349, 788, 1721, 2009, 2124, 2278, 2381, 2393
MflI	RGATCY	5 cut(s)	236, 778, 977, 1633, 2231
MhlI	GDGCHC	2 cut(s)	1423, 2304
MlyI	GAGTC	6 cut(s)	35, 595, 836, 950, 2152, 2341
MmeI	TCCRAC	2 cut(s)	174, 2120
Mph1103I	ATGCAT	1 cut(s)	713
MroI	TCCGGA	1 cut(s)	574
MroXI	GAANNNNTTC	1 cut(s)	1663
MseI	TTAA	4 cut(s)	570, 1298, 1770, 2322
MslI	CAYNNNNRTG	3 cut(s)	507, 1517, 1842
MspA1I	CMGCKG	1 cut(s)	443
MspI	CCGG	3 cut(s)	162, 398, 575
MspR9I	CCNGG	5 cut(s)	399, 495, 1365, 1377, 1545
Mva1269I	GAATGC	1 cut(s)	711
MvaI	CCWGG	4 cut(s)	495, 1365, 1377, 1545
MvnI	CGCG	1 cut(s)	81
MwoI	GCNNNNNNNGC	1 cut(s)	645
NciI	CCSGG	1 cut(s)	399
NdeI	CATATG	1 cut(s)	1111
NlaIV	GGNNCC	4 cut(s)	438, 1107, 1285, 1820
NmuCI	GTSAC	3 cut(s)	157, 1799, 2057
NsiI	ATGCAT	1 cut(s)	713
NspI	RCATGY	3 cut(s)	622, 1477, 1516
NspV	TTCGAA	1 cut(s)	1667
PagI	TCATGA	1 cut(s)	2335
PaqCI	CACCTGC	1 cut(s)	1205
PcsI	WCGNNNNNNNCGW	1 cut(s)	45
PctI	GAATGC	1 cut(s)	711
PdmI	GAANNNNTTC	1 cut(s)	1663
PfeI	GAWTC	8 cut(s)	131, 283, 887, 895, 998, 1435, 1540, 2132
PflFI	GACNNNGTC	2 cut(s)	44, 541
PflMI	CCANNNNNTGG	2 cut(s)	857, 1550
PfoI	TCCNGGA	2 cut(s)	493, 1363
PinAI	ACCGGT	1 cut(s)	161
PkrI	GCNGC	5 cut(s)	203, 445, 686, 1123, 1408
PleI	GAGTC	6 cut(s)	35, 594, 835, 949, 2151, 2340
PpsI	GAGTC	6 cut(s)	35, 594, 835, 949, 2151, 2340
PpuMI	RGGWCCY	1 cut(s)	1818
Psp1406I	AACGTT	1 cut(s)	353
Psp5II	RGGWCCY	1 cut(s)	1818
Psp6I	CCWGG	4 cut(s)	493, 1363, 1375, 1543
PspEI	GGTNACC	1 cut(s)	948
PspGI	CCWGG	4 cut(s)	493, 1363, 1375, 1543
PspN4I	GGNNCC	4 cut(s)	438, 1107, 1285, 1820
PspPI	GGNCC	4 cut(s)	7, 63, 1025, 1818
PspPPI	RGGWCCY	1 cut(s)	1818
PsrI	GAACNNNNNNTAC	2 cut(s)	513, 545
PstI	CTGCAG	2 cut(s)	395, 1216
PsuI	RGATCY	5 cut(s)	236, 778, 977, 1633, 2231
PsyI	GACNNNGTC	2 cut(s)	44, 541
RseI	CAYNNNNRTG	3 cut(s)	507, 1517, 1842
SalI	GTCGAC	1 cut(s)	47
SaqAI	TTAA	4 cut(s)	570, 1298, 1770, 2322
SatI	GCNGC	5 cut(s)	202, 444, 685, 1122, 1407
Sau96I	GGNCC	4 cut(s)	7, 63, 1025, 1818
SchI	GAGTC	6 cut(s)	35, 595, 836, 950, 2152, 2341
ScrFI	CCNGG	5 cut(s)	399, 495, 1365, 1377, 1545
SduI	GDGCHC	2 cut(s)	1423, 2304
SfaNI	GCATC	6 cut(s)	364, 376, 429, 475, 997, 1846
SfcI	CTRYAG	3 cut(s)	391, 597, 1212
SfuI	TTCGAA	1 cut(s)	1667
SinI	GGWCC	4 cut(s)	7, 63, 1025, 1818
SmiMI	CAYNNNNRTG	3 cut(s)	507, 1517, 1842
SmlI	CTYRAG	1 cut(s)	728
SmoI	CTYRAG	1 cut(s)	728
SpeI	ACTAGT	1 cut(s)	479
SsiI	CCGC	8 cut(s)	5, 79, 103, 201, 287, 443, 1424, 1834
SspI	AATATT	1 cut(s)	295
SspMI	CTAG	3 cut(s)	480, 2136, 2316
StyD4I	CCNGG	5 cut(s)	397, 493, 1363, 1375, 1543
StyI	CCWWGG	1 cut(s)	1199
TaiI	ACGT	2 cut(s)	333, 356
TaqI	TCGA	4 cut(s)	39, 48, 54, 1667
TaqII	GACCGA	2 cut(s)	51, 1608
TauI	GCSGC	2 cut(s)	204, 446
TfiI	GAWTC	8 cut(s)	131, 283, 887, 895, 998, 1435, 1540, 2132
Tru1I	TTAA	4 cut(s)	570, 1298, 1770, 2322
Tru9I	TTAA	4 cut(s)	570, 1298, 1770, 2322
TseFI	GTSAC	3 cut(s)	157, 1799, 2057
TseI	GCWGC	3 cut(s)	684, 1121, 1406
Tsp45I	GTSAC	3 cut(s)	157, 1799, 2057
TspDTI	ATGAA	8 cut(s)	47, 233, 420, 647, 1331, 1722, 2055, 2382
TspGWI	ACGGA	6 cut(s)	34, 64, 199, 350, 1266, 2416
Tth111I	GACNNNGTC	2 cut(s)	44, 541
Van91I	CCANNNNNTGG	2 cut(s)	857, 1550
VpaK11BI	GGWCC	4 cut(s)	7, 63, 1025, 1818
XapI	RAATTY	6 cut(s)	17, 35, 192, 452, 1043, 1676
XceI	RCATGY	3 cut(s)	622, 1477, 1516
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1867
XmiI	GTMKAC	1 cut(s)	48
XmnI	GAANNNNTTC	1 cut(s)	1663
XspI	CTAG	3 cut(s)	480, 2136, 2316
Zsp2I	ATGCAT	1 cut(s)	713

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.