Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0009656

Physical Location & Seq

Genomic Coordinates Reverse (-)

67757336 .. 67761584

Gene Structure 4249 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG522500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2442 bp

ATGGCGGTTCAGTTCAAATTCCGAAGCTCTGCGAAATTCGATTCCGTCGACCTCGAAGGTCGAGCCTCAATCCCCGTTCGTGATCTCAAAGCCAAAATCATCCGCCACAACAACCTCAACATCTGTCAAGATTCCGATCTCGTCTTCTCCGACGCCATAACCGGTCAAGAGTACACTAACGAGAATATTCAAATTCCGTGCGGCTCGTCCGTGATTATCAAGAGAGTTCCTGCAGGATCGGCACATGTGGATATGCCTCACTTCAACTGCAAGGAAGCTGGGAATCCGCCGAATGTTGAGACAGTCGACTTTGATGACTTTGGGGTTGACGTGTATCCCGTTCCCGAGGCAACCTTCGTCTGTTCTGGTTTGGATGCAGACAAGGATGCCCGCAGTCGGGGATATGAACCAAATACTGGCATCACAAGATGTTTGGAGCCAGCAGTAGGAGGATGTCAGAAACTTGAAGCAAGTGGGATTAGTGATGCTATTCCAGGAAGTCATTCGCATGGTGGAGTTGAACAAATCTTACCACAGACAAACTCAAAGCCTGAGGTTCAAGAAGACTTTAATTTGGAAAAGATGGGTTGTGATCCCGTAGATACAAAACATGCTGATATGCCATCAGAGATGAAATGCTCTCTATGCAACTCGTTTTTCAAGGAGGCTGTGATGATACCCTGCTGCCAGCACAGTTTTTGTGAGAAATGTATACATCAAATGCTGCTTGAGAAGGCAAGATGTCCCAAGTGTTTTTCAACCAAGTGCAGAATTGAAGATCTGCTACCAAATATATCTCTTAGGCAAGCAATGGACCATTTCCAAGAGTCTCAAAATTTAATCACTGTTCCAGATAATGATTTTTGCCAATACGCTCCAGATGGAGAATCGGGAATTCAGGCAAAAGATGTCTCTTGTGGTGGTAGTATTTTTCAAAGGGAGTCAGAGTTGCCTCACTCTCCTGAAACAGGGATGGGATCTAATAATTGCTTAGCAGAATCTGCTTGTCACTCACCATTCAAAAATGATGCGCCGTATCATTTTGGTGCAAGAAACATGCAAAAAATTCCCAAGTTTTCGCACAAGAACAATCAAATCGATGGAGATGGATACGGTTATACTTGTGTGGCTCCATATGGCTCGGCAGCTTTTGATGATTTCCAAGGGGAAAGCAAGCCTATACCTAAGGAAGCTGAACCTGTAATCAAGAAAAAGAGGCCACCTTGGGTTTATACTGCAGGTGGTGGAAAAAGTTTTTTGGAGAGTGGGAGAAATAGAAAGGGGGATCGTGCCTGTTATATGTGTGGCTCCCCAGACCATTTAATAAGAGTGTGTCCAGTTGCTACCAGTCCACGCCCTATGCTTCATTCAGGAAATGCAGTCTTTCCAGGAGCTATGCCAGGTTATGTGCCACCATACTGGGATGGGGCTCTGTTGCCTCATACCCCGCCCTTTAGAAATCTATACGGAAATCATGGGATGACAGCTTTTGACACGTTGATCCCTCACACTCCTTTTTCTGTTCATCCATACATGCACACGCCATCCATGTATAGATCGATTCCAGGCTTTGGTGGATATATGGGAATGGGAGGTGTAGCACCTCTTCCTGAAACTGGTGAAGACTGTTATATAAGTCGTTCAGAATTTCTGGATCTTGAAGGTCAAGAAAAGAGGAGAAAACTTTCAAGGGAGAATTTTAGGAGAGATCAATCTTGTGATGACGATGAAGACTGGGGGAGGCATCAGTATAATGGGAGTGCAAGATTGCAAGAGCATAAATCTTTTGTAAACAGGGAAAAGAGTGTAAGCTACTCCAGTGACGGCTCTACTAAAAGGTCTCAGAGACAAGATCGGCATCGTAATCAGATAGATGATGACAACATTCATTTGGTTGGTCATCGGAAGAGTTCTCATTTGGTGGTTGGTCATCAGGATGGGAAACTGTATAATCCCACGGAGAAATCAAGTTCGGAATTAGATGATATGCCAAGTAGCTCCAGTTGGCACAGTGAAGAGAAACACAAACATTATCATAGAAGCTCCAGAAAGCAAAATGAAAGAAGAGAGCAGTGTGACGGTGATAAACACAAACACTATCATAGAAGCTCCAGATATCACAAGGAAAGAAGAGAGCAGTGTGGTAGTGATTCTAGTCGGAGTCATCATCAAAATATCATTGAGAAAGATGATAAGAGAAAGGGAATTCAGCATAATAACAAAAGGCACAAACATCACAGTAACTCGGGATCTGATTTAGAACACAGTGTTTCCAGTGATAAGAAGCTACAGAAAGGGAGCAGTCACAATTTTAGAAAATCTGAGCACAATGCAAAGTCTAGTGTTGATGAGCGCAGTCATGAAAGATGGAAAATGGTTAGTGGGTCAGATGAAGATAGTGGAGAAGATTATCGGTACTGTAAACGGAAAAGGGTAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001701 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006275 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006974 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009790 GO:0009792 GO:0009888 GO:0009889 GO:0009987 GO:0010556 GO:0016567 GO:0016604 GO:0016607 GO:0016740 GO:0019219 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0019900 GO:0019901 GO:0019941 GO:0030163 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032446 GO:0032501 GO:0032502 GO:0032991 GO:0033554 GO:0035264 GO:0036211 GO:0040007 GO:0043009 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0048513 GO:0048568 GO:0048589 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051171 GO:0051603 GO:0051716 GO:0060255 GO:0060429 GO:0061053 GO:0061630 GO:0061659 GO:0065007 GO:0070013 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:2000112

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DWNN zf-C3HC4_2 zf-CCHC

Protein Analysis

813

Amino Acids

91.5

Weight (kDa)

7.03

Isoelectric Point (pI)

58.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DWNN	PF08783	3 - 77	1.9e-19	DWNN domain
zf-C3HC4_2	PF13923	212 - 251	1.8e-08	Zinc finger, C3HC4 type (RING finger)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009656)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g31120 FvH4_2g31120 FvH4_2g31120 FvH4_2g31120 FvH4_2g31120 FvH4_2g31120
malus_domestica	MD08G1070600.v1.1 MD15G1051500.v1.1
prunus_persica	Prupe.1G405500_v2.0.a1 Prupe.1G405500_v2.0.a1 Prupe.1G405500_v2.0.a1
pyrus_communis	pycom08g05840 pycom15g04930
rosa_chinensis	RchiOBHm_Chr6g0311661
rosa_laevigata	RLG00000010383
rosa_roxburghii	Rroxscaffold_7G00157400
rosa_rugosa	Rorug06G0390500.1
rosa_samantha	Rh6AG505800 Rh6BG516600 Rh6CG522500 Rh6DG508200
rosa_wichuraiana	Rw6G044020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1229
Acc36I	ACCTGC	1 cut(s)	1229
AccB7I	CCANNNNNTGG	2 cut(s)	416, 1571
AccI	GTMKAC	3 cut(s)	48, 306, 712
AciI	CCGC	6 cut(s)	5, 103, 201, 287, 391, 1448
AclWI	GGATC	7 cut(s)	244, 587, 985, 1293, 1495, 1662, 2257
AcsI	RAATTY	9 cut(s)	17, 35, 192, 835, 894, 1065, 1646, 1696, 2205
AcyI	GRCGYC	1 cut(s)	153
AfaI	GTAC	2 cut(s)	173, 2417
AfiI	CCNNNNNNNGG	7 cut(s)	396, 397, 416, 446, 968, 1571, 1616
AflIII	ACRYGT	3 cut(s)	244, 330, 1494
AgeI	ACCGGT	1 cut(s)	161
AjiI	CACGTC	1 cut(s)	331
AjnI	CCWGG	4 cut(s)	493, 1387, 1399, 1564
Alw21I	GWGCWC	1 cut(s)	2328
Alw26I	GTCTC	5 cut(s)	293, 834, 916, 1840, 1845
AlwI	GGATC	7 cut(s)	244, 587, 985, 1293, 1495, 1662, 2257
AlwNI	CAGNNNCTG	1 cut(s)	1001
Ama87I	CYCGRG	2 cut(s)	344, 2245
AoxI	GGCC	1 cut(s)	1217
ApeKI	GCWGC	3 cut(s)	684, 724, 1145
ApoI	RAATTY	9 cut(s)	17, 35, 192, 835, 894, 1065, 1646, 1696, 2205
AsiGI	ACCGGT	1 cut(s)	161
Asp700I	GAANNNNTTC	2 cut(s)	502, 1684
AspLEI	GCGC	2 cut(s)	1033, 2355
AspS9I	GGNCC	1 cut(s)	814
AsuHPI	GGTGA	3 cut(s)	1005, 1631, 2093
AvaI	CYCGRG	2 cut(s)	344, 2245
AvaII	GGWCC	1 cut(s)	814
AxyI	CCTNAGG	2 cut(s)	552, 1185
BanII	GRGCYC	1 cut(s)	1432
BarI	GAAGNNNNNNTAC	4 cut(s)	768, 800, 1590, 1622
BbsI	GAAGAC	4 cut(s)	136, 570, 1629, 1737
Bbv12I	GWGCWC	1 cut(s)	2328
BbvI	GCAGC	3 cut(s)	671, 711, 1157
BceAI	ACGGC	2 cut(s)	1018, 1840
BciT130I	CCWGG	4 cut(s)	495, 1389, 1401, 1566
BciVI	GTATCC	2 cut(s)	345, 1103
BcoDI	GTCTC	5 cut(s)	293, 834, 916, 1840, 1845
BfaI	CTAG	2 cut(s)	2154, 2340
BfmI	CTRYAG	3 cut(s)	231, 1236, 2288
BfuAI	ACCTGC	1 cut(s)	1229
BfuI	GTATCC	2 cut(s)	345, 1103
BglII	AGATCT	1 cut(s)	778
BisI	GCNGC	4 cut(s)	202, 685, 725, 1146
BlpI	GCTNAGC	1 cut(s)	991
BlsI	GCNGC	4 cut(s)	203, 686, 726, 1147
Bme1390I	CCNGG	4 cut(s)	495, 1389, 1401, 1566
Bme18I	GGWCC	1 cut(s)	814
BmeT110I	CYCGRG	2 cut(s)	344, 2245
BmgBI	CACGTC	1 cut(s)	331
BmgT120I	GGNCC	1 cut(s)	814
BmiI	GGNNCC	3 cut(s)	438, 1131, 1309
BmrFI	CCNGG	4 cut(s)	495, 1389, 1401, 1566
BmrI	ACTGGG	2 cut(s)	1429, 1744
BmsI	GCATC	7 cut(s)	364, 376, 429, 475, 1018, 1753, 1867
BmuI	ACTGGG	2 cut(s)	1429, 1744
BpiI	GAAGAC	4 cut(s)	136, 570, 1629, 1737
BpmI	CTGGAG	5 cut(s)	861, 1801, 1984, 2029, 2095
Bpu1102I	GCTNAGC	1 cut(s)	991
BpuEI	CTTGAG	1 cut(s)	749
Bsa29I	ATCGAT	2 cut(s)	1098, 1559
BsaBI	GATNNNNATC	2 cut(s)	135, 1857
BsaHI	GRCGYC	1 cut(s)	153
BsaI	GGTCTC	1 cut(s)	1845
BsaJI	CCNNGG	4 cut(s)	345, 1162, 1223, 1956
BsaWI	WCCGGW	1 cut(s)	161
BsaXI	ACNNNNNCTCC	2 cut(s)	932, 962
Bsc4I	CCNNNNNNNGG	7 cut(s)	396, 397, 416, 446, 968, 1571, 1616
Bse118I	RCCGGY	1 cut(s)	161
Bse1I	ACTGG	9 cut(s)	421, 1337, 1347, 1424, 1621, 1739, 1818, 2001, 2274
Bse21I	CCTNAGG	2 cut(s)	552, 1185
Bse3DI	GCAATG	1 cut(s)	816
Bse8I	GATNNNNATC	2 cut(s)	135, 1857
BseBI	CCWGG	4 cut(s)	495, 1389, 1401, 1566
BseCI	ATCGAT	2 cut(s)	1098, 1559
BseDI	CCNNGG	4 cut(s)	345, 1162, 1223, 1956
BseJI	GATNNNNATC	2 cut(s)	135, 1857
BseLI	CCNNNNNNNGG	7 cut(s)	396, 397, 416, 446, 968, 1571, 1616
BseMI	GCAATG	1 cut(s)	816
BseMII	CTCAG	3 cut(s)	543, 1856, 2313
BseNI	ACTGG	9 cut(s)	421, 1337, 1347, 1424, 1621, 1739, 1818, 2001, 2274
BseRI	GAGGAG	1 cut(s)	1690
BseXI	GCAGC	3 cut(s)	671, 711, 1157
BseYI	CCCAGC	1 cut(s)	278
BsgI	GTGCAG	1 cut(s)	787
BshFI	GGCC	1 cut(s)	1219
BshTI	ACCGGT	1 cut(s)	161
BshVI	ATCGAT	2 cut(s)	1098, 1559
BsiHKAI	GWGCWC	1 cut(s)	2328
BsiHKCI	CYCGRG	2 cut(s)	344, 2245
BsiSI	CCGG	1 cut(s)	162
BslFI	GGGAC	1 cut(s)	729
BslI	CCNNNNNNNGG	7 cut(s)	396, 397, 416, 446, 968, 1571, 1616
BsmAI	GTCTC	5 cut(s)	293, 834, 916, 1840, 1845
BsmFI	GGGAC	1 cut(s)	729
BsnI	GGCC	1 cut(s)	1219
Bso31I	GGTCTC	1 cut(s)	1845
BsoBI	CYCGRG	2 cut(s)	344, 2245
Bsp1286I	GDGCHC	2 cut(s)	1432, 2328
Bsp1720I	GCTNAGC	1 cut(s)	991
BspACI	CCGC	6 cut(s)	5, 103, 201, 287, 391, 1448
BspANI	GGCC	1 cut(s)	1219
BspCNI	CTCAG	3 cut(s)	544, 1855, 2314
BspDI	ATCGAT	2 cut(s)	1098, 1559
BspHI	TCATGA	1 cut(s)	2359
BspLI	GGNNCC	3 cut(s)	438, 1131, 1309
BspMAI	CTGCAG	2 cut(s)	235, 1240
BspMI	ACCTGC	1 cut(s)	1229
BspPI	GGATC	7 cut(s)	244, 587, 985, 1293, 1495, 1662, 2257
BspTNI	GGTCTC	1 cut(s)	1845
BsrDI	GCAATG	1 cut(s)	816
BsrFI	RCCGGY	1 cut(s)	161
BsrI	ACTGG	9 cut(s)	421, 1337, 1347, 1424, 1621, 1739, 1818, 2001, 2274
BssAI	RCCGGY	1 cut(s)	161
BssECI	CCNNGG	4 cut(s)	345, 1162, 1223, 1956
BssNAI	GTATAC	1 cut(s)	713
BssNI	GRCGYC	1 cut(s)	153
BssT1I	CCWWGG	2 cut(s)	1162, 1223
Bst1107I	GTATAC	1 cut(s)	713
Bst2UI	CCWGG	4 cut(s)	495, 1389, 1401, 1566
Bst6I	CTCTTC	5 cut(s)	1611, 1901, 2010, 2059, 2125
BstACI	GRCGYC	1 cut(s)	153
BstAPI	GCANNNNNTGC	1 cut(s)	1001
BstC8I	GCNNGC	5 cut(s)	391, 441, 689, 807, 1175
BstDEI	CTNAG	6 cut(s)	552, 800, 991, 1185, 1842, 2322
BstDSI	CCRYGG	1 cut(s)	1956
BstENI	CCTNNNNNAGG	1 cut(s)	966
BstHHI	GCGC	2 cut(s)	1033, 2355
BstMAI	GTCTC	5 cut(s)	293, 834, 916, 1840, 1845
BstMWI	GCNNNNNNNGC	3 cut(s)	239, 645, 1001
BstNI	CCWGG	4 cut(s)	495, 1389, 1401, 1566
BstNSI	RCATGY	4 cut(s)	248, 614, 1060, 1537
BstSCI	CCNGG	4 cut(s)	493, 1387, 1399, 1564
BstSFI	CTRYAG	3 cut(s)	231, 1236, 2288
BstV1I	GCAGC	3 cut(s)	671, 711, 1157
BstV2I	GAAGAC	4 cut(s)	136, 570, 1629, 1737
BstX2I	RGATCY	4 cut(s)	778, 977, 1654, 2249
BstXI	CCANNNNNNTGG	1 cut(s)	1419
BstYI	RGATCY	4 cut(s)	778, 977, 1654, 2249
BstZ17I	GTATAC	1 cut(s)	713
Bsu15I	ATCGAT	2 cut(s)	1098, 1559
Bsu36I	CCTNAGG	2 cut(s)	552, 1185
BsuI	GTATCC	2 cut(s)	345, 1103
BsuRI	GGCC	1 cut(s)	1219
BsuTUI	ATCGAT	2 cut(s)	1098, 1559
BtgI	CCRYGG	1 cut(s)	1956
BtrI	CACGTC	1 cut(s)	331
BtsI	GCAGTG	2 cut(s)	2078, 2144
BtsIMutI	CAGTG	7 cut(s)	843, 1825, 2017, 2078, 2144, 2272, 2281
BveI	ACCTGC	1 cut(s)	1229
Cac8I	GCNNGC	5 cut(s)	391, 441, 689, 807, 1175
CaiI	CAGNNNCTG	1 cut(s)	1001
CciI	TCATGA	1 cut(s)	2359
CfoI	GCGC	2 cut(s)	1033, 2355
Cfr10I	RCCGGY	1 cut(s)	161
Cfr13I	GGNCC	1 cut(s)	814
ClaI	ATCGAT	2 cut(s)	1098, 1559
CseI	GACGC	1 cut(s)	161
Csp6I	GTAC	2 cut(s)	172, 2416
CspAI	ACCGGT	1 cut(s)	161
CviAII	CATG	8 cut(s)	245, 509, 611, 1057, 1475, 1534, 1549, 2360
CviQI	GTAC	2 cut(s)	172, 2416
DdeI	CTNAG	6 cut(s)	552, 800, 991, 1185, 1842, 2322
Eam1104I	CTCTTC	5 cut(s)	1611, 1901, 2010, 2059, 2125
EarI	CTCTTC	5 cut(s)	1611, 1901, 2010, 2059, 2125
EciI	GGCGGA	2 cut(s)	92, 276
Eco130I	CCWWGG	2 cut(s)	1162, 1223
Eco24I	GRGCYC	1 cut(s)	1432
Eco31I	GGTCTC	1 cut(s)	1845
Eco32I	GATATC	1 cut(s)	2117
Eco47I	GGWCC	1 cut(s)	814
Eco81I	CCTNAGG	2 cut(s)	552, 1185
Eco88I	CYCGRG	2 cut(s)	344, 2245
EcoNI	CCTNNNNNAGG	1 cut(s)	966
EcoRI	GAATTC	2 cut(s)	894, 2205
EcoRII	CCWGG	4 cut(s)	493, 1387, 1399, 1564
EcoRV	GATATC	1 cut(s)	2117
EcoT14I	CCWWGG	2 cut(s)	1162, 1223
EcoT38I	GRGCYC	1 cut(s)	1432
ErhI	CCWWGG	2 cut(s)	1162, 1223
FaeI	CATG	8 cut(s)	248, 512, 614, 1060, 1478, 1537, 1552, 2363
FaqI	GGGAC	1 cut(s)	729
FatI	CATG	8 cut(s)	244, 508, 610, 1056, 1474, 1533, 1548, 2359
FauI	CCCGC	2 cut(s)	398, 1455
FauNDI	CATATG	1 cut(s)	1135
FblI	GTMKAC	3 cut(s)	48, 306, 712
Fnu4HI	GCNGC	4 cut(s)	202, 685, 725, 1146
FriOI	GRGCYC	1 cut(s)	1432
Fsp4HI	GCNGC	4 cut(s)	202, 685, 725, 1146
FspBI	CTAG	2 cut(s)	2154, 2340
GlaI	GCGC	2 cut(s)	1032, 2354
GluI	GCNGC	4 cut(s)	202, 685, 725, 1146
GsaI	CCCAGC	1 cut(s)	282
GsuI	CTGGAG	5 cut(s)	861, 1801, 1984, 2029, 2095
HaeIII	GGCC	1 cut(s)	1219
HapII	CCGG	1 cut(s)	162
HgaI	GACGC	1 cut(s)	161
HhaI	GCGC	2 cut(s)	1033, 2355
Hin1I	GRCGYC	1 cut(s)	153
Hin1II	CATG	8 cut(s)	248, 512, 614, 1060, 1478, 1537, 1552, 2363
Hin6I	GCGC	2 cut(s)	1031, 2353
HinP1I	GCGC	2 cut(s)	1031, 2353
HincII	GTYRAC	3 cut(s)	49, 307, 328
HindII	GTYRAC	3 cut(s)	49, 307, 328
HpaII	CCGG	1 cut(s)	162
HphI	GGTGA	3 cut(s)	1005, 1631, 2093
Hpy166II	GTNNAC	8 cut(s)	49, 174, 307, 328, 713, 1352, 1792, 2423
Hpy8I	GTNNAC	8 cut(s)	49, 174, 307, 328, 713, 1352, 1792, 2423
Hpy99I	CGWCG	2 cut(s)	50, 155
HpyAV	CCTTC	4 cut(s)	50, 364, 727, 1655
HpyCH4IV	ACGT	2 cut(s)	330, 1496
HpyF10VI	GCNNNNNNNGC	3 cut(s)	239, 645, 1001
HpyF3I	CTNAG	6 cut(s)	552, 800, 991, 1185, 1842, 2322
HpySE526I	ACGT	2 cut(s)	330, 1496
Hsp92I	GRCGYC	1 cut(s)	153
Hsp92II	CATG	8 cut(s)	248, 512, 614, 1060, 1478, 1537, 1552, 2363
HspAI	GCGC	2 cut(s)	1031, 2353
LmnI	GCTCC	9 cut(s)	436, 880, 1135, 1313, 1391, 2003, 2048, 2114, 2298
Lsp1109I	GCAGC	3 cut(s)	671, 711, 1157
LweI	GCATC	7 cut(s)	364, 376, 429, 475, 1018, 1753, 1867
MaeI	CTAG	2 cut(s)	2154, 2340
MaeII	ACGT	2 cut(s)	330, 1496
MaeIII	GTNAC	5 cut(s)	1007, 1820, 2075, 2240, 2303
MflI	RGATCY	4 cut(s)	778, 977, 1654, 2249
MhlI	GDGCHC	2 cut(s)	1432, 2328
MlyI	GAGTC	3 cut(s)	836, 950, 2170
MmeI	TCCRAC	2 cut(s)	174, 2138
MroXI	GAANNNNTTC	2 cut(s)	502, 1684
MseI	TTAA	3 cut(s)	570, 839, 1322
MslI	CAYNNNNRTG	3 cut(s)	507, 1044, 1935
MspI	CCGG	1 cut(s)	162
MspR9I	CCNGG	4 cut(s)	495, 1389, 1401, 1566
MvaI	CCWGG	4 cut(s)	495, 1389, 1401, 1566
MwoI	GCNNNNNNNGC	3 cut(s)	239, 645, 1001
NdeI	CATATG	1 cut(s)	1135
NlaIII	CATG	8 cut(s)	248, 512, 614, 1060, 1478, 1537, 1552, 2363
NlaIV	GGNNCC	3 cut(s)	438, 1131, 1309
NmeAIII	GCCGAG	1 cut(s)	1121
NmuCI	GTSAC	4 cut(s)	1007, 1820, 2075, 2303
NspI	RCATGY	4 cut(s)	248, 614, 1060, 1537
PagI	TCATGA	1 cut(s)	2359
PaqCI	CACCTGC	1 cut(s)	1229
PciI	ACATGT	1 cut(s)	244
PcsI	WCGNNNNNNNCGW	3 cut(s)	45, 147, 336
PdmI	GAANNNNTTC	2 cut(s)	502, 1684
PfeI	GAWTC	7 cut(s)	41, 131, 283, 887, 998, 1561, 2150
PflMI	CCANNNNNTGG	2 cut(s)	416, 1571
PfoI	TCCNGGA	2 cut(s)	493, 1387
PinAI	ACCGGT	1 cut(s)	161
PkrI	GCNGC	4 cut(s)	203, 686, 726, 1147
PleI	GAGTC	3 cut(s)	835, 949, 2169
PpsI	GAGTC	3 cut(s)	835, 949, 2169
PscI	ACATGT	1 cut(s)	244
Psp6I	CCWGG	4 cut(s)	493, 1387, 1399, 1564
PspFI	CCCAGC	1 cut(s)	278
PspGI	CCWGG	4 cut(s)	493, 1387, 1399, 1564
PspN4I	GGNNCC	3 cut(s)	438, 1131, 1309
PspPI	GGNCC	1 cut(s)	814
PsrI	GAACNNNNNNTAC	2 cut(s)	513, 545
PstI	CTGCAG	2 cut(s)	235, 1240
PstNI	CAGNNNCTG	1 cut(s)	1001
PsuI	RGATCY	4 cut(s)	778, 977, 1654, 2249
RsaI	GTAC	2 cut(s)	173, 2417
RsaNI	GTAC	2 cut(s)	172, 2416
RseI	CAYNNNNRTG	3 cut(s)	507, 1044, 1935
SalI	GTCGAC	2 cut(s)	47, 305
SaqAI	TTAA	3 cut(s)	570, 839, 1322
SatI	GCNGC	4 cut(s)	202, 685, 725, 1146
Sau96I	GGNCC	1 cut(s)	814
SbfI	CCTGCAGG	1 cut(s)	235
SchI	GAGTC	3 cut(s)	836, 950, 2170
ScrFI	CCNGG	4 cut(s)	495, 1389, 1401, 1566
SdaI	CCTGCAGG	1 cut(s)	235
SduI	GDGCHC	2 cut(s)	1432, 2328
SfaNI	GCATC	7 cut(s)	364, 376, 429, 475, 1018, 1753, 1867
SfcI	CTRYAG	3 cut(s)	231, 1236, 2288
SinI	GGWCC	1 cut(s)	814
SmiMI	CAYNNNNRTG	3 cut(s)	507, 1044, 1935
SmlI	CTYRAG	1 cut(s)	728
SmoI	CTYRAG	1 cut(s)	728
Sse8387I	CCTGCAGG	1 cut(s)	235
SsiI	CCGC	6 cut(s)	5, 103, 201, 287, 391, 1448
SspI	AATATT	1 cut(s)	187
SspMI	CTAG	2 cut(s)	2154, 2340
StyD4I	CCNGG	4 cut(s)	493, 1387, 1399, 1564
StyI	CCWWGG	2 cut(s)	1162, 1223
TaiI	ACGT	2 cut(s)	333, 1499
TaqI	TCGA	7 cut(s)	39, 48, 54, 61, 306, 1098, 1559
TatI	WGTACW	1 cut(s)	171
TauI	GCSGC	1 cut(s)	204
TfiI	GAWTC	7 cut(s)	41, 131, 283, 887, 998, 1561, 2150
Tru1I	TTAA	3 cut(s)	570, 839, 1322
Tru9I	TTAA	3 cut(s)	570, 839, 1322
TscAI	CASTG	7 cut(s)	850, 1825, 2017, 2078, 2144, 2272, 2281
TseFI	GTSAC	4 cut(s)	1007, 1820, 2075, 2303
TseI	GCWGC	3 cut(s)	684, 724, 1145
Tsp45I	GTSAC	4 cut(s)	1007, 1820, 2075, 2303
TspDTI	ATGAA	9 cut(s)	420, 647, 1355, 1514, 1743, 1877, 2073, 2376, 2406
TspGWI	ACGGA	6 cut(s)	34, 186, 199, 1482, 1973, 2440
TspRI	CASTG	7 cut(s)	850, 1825, 2017, 2078, 2144, 2272, 2281
Van91I	CCANNNNNTGG	2 cut(s)	416, 1571
VpaK11BI	GGWCC	1 cut(s)	814
XagI	CCTNNNNNAGG	1 cut(s)	966
XapI	RAATTY	9 cut(s)	17, 35, 192, 835, 894, 1065, 1646, 1696, 2205
XceI	RCATGY	4 cut(s)	248, 614, 1060, 1537
XmiI	GTMKAC	3 cut(s)	48, 306, 712
XmnI	GAANNNNTTC	2 cut(s)	502, 1684
XspI	CTAG	2 cut(s)	2154, 2340

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.