Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0009656

Physical Location & Seq

Genomic Coordinates Reverse (-)

67136273 .. 67141700

Gene Structure 5428 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G044020.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2442 bp

ATGGCGGTTCAGTTCAAATTCCGAAGCTCTGCGAAATTCGATTCCGTCGACCTCGAAGGTCGAGCCTCAATCCGCGTTCGTGATCTCAAAGCCAAAATCATCCGCCACAACAACCTCAACATCTGTCAAGATTCCGATCTCGTCTTCTCCGACTCCATAACCGGTCAAGAGTACACTAACGAGAACATTCAAATTCCGTGCGGCTCGTCCGTGATTATCAAGAGAGTTCCTGCAGGATCGGTACATGTGGATATGCCTCACTTCAACTGCAAGGAACCTGGGAATCCGCCGAATGTTGAGACAGTCGACTTTGATGACTTTGGGGTTGACGTGTATCCCGTTCCCGAGGCAACCTTCGTCTGTTCTGGTTTGGATGCAGACAAGGATGCCTGCAGTCCGGGTTATGAACCAAATACTGGCATCACAAGATGTTTGGAGCCAGCAGTAGGAGGATGTCAGAAACTTGAAGCAAGTGGGACTAGTGATGCTCTTCCAGGAAGTCATTCACATGGTGGTGTTGAACAAATCTTACCACAGACAAAGTCAAGGCCTGAGGTTCAAGAAGACTTTAATTTGGAAAAGATGGGTTGTGATCCCGTAGATACAAAACATACTGATATGCCATCAGAGATGAAATGCTCTCTATGCAACTCGTTTTTCAAGGAGGCTGTGATGATACCCTGCTGCCAGCACAGTTTTTGTGAGAAATGTATACGTCAAATGCTGCTTGAGAAGGCAAGATGTCCTAAGTGTTTTTCAACCAAGAGCAGAATTGAAGATCTGCTACCAAATATATCTCTTAGGCAAGCAATGGAGCATTTCCAAGAGTCTCAAAATTTAATCACTGTTCCAGATAATGCTTTTTGCCAATACGCTCCAGATGGAGAATCGGGAATTCAGGCAAAAGATGTCTCTTGTGGTGGTAGTATTTTTCAAAGGGAGTCAGAGTTGCCTCATTCTCCTGAAACAGGGATGGGATCTAATAATTGCTTAGCAGAATCTGCTTGTCACTCACCATTCAAAAATGATGCGCCGTATCATTTTGGTGCAAGAAACATGCAAAAATTTCCCAAGTTTTCGCACAAGAACAATCAAATCGATGGAGACGGATACGGTTCTACTCGTGTGGCTCCATATGGCTTGGCAGCTTTTGATGATTTCCAAGGGGAAAGCAAGCCTATACCTGAGGAAGCTGAACCTGTAATCAAGAAAAAGAGGCCACCTTGGGTTTATACTGCAGGTGGTGGAAAAAGTTTTATGGAGAGTGGGAGAAATAGAAAGGAGGATCGTGCCTGTTATATGTGTGGCTCCCCAGACCATTTAATAAGAGTGTGTCCAGTTGCTACCAGTCCACGCCCTATGCTTCATTCAGGAAATGCAGTCTTTCCAAGAGCTATGCCAGGTTATGTGCCACCATACTGGGATGGGGCTCTGTTGCCTCATACCCCACCCTTTAGAAATCTATACGGAAATCATGGGATGACAGCTTTTGACACCATGTTGATCCCTCACGCTCCTTTTTCTGTTCATCCATACATGCACACGCCATCCATGTATAGATCGATTCCAGGCTTTGGTGGATACATGGGAATGGGAGGTGTAGCACCTCTTCCTGAAACTGGTGAAGACTGTTATATAAGTCGTTCAGAATTTCTGGATCTTGAAGGTCAAGAAAAGAGGAGAAAACTGTCAAAGGAGAATTTTAGGAGAGATCAATCTTGTGATGACGATGAAGACTGGGGGAGGCATCTGTATAATGGGAGTGCAAGATTGCAAGAGCATAAATCTTTTGTAGACAGGGAAAAGAGTGTAAGCTACTCCAGTGACGGCTCTACTAAAAGATCTCAGAGACAAGATCAACATCGTAATCAGATAGATGACAACAACATTCATTTGGTTGGTCTTCAGAAAAGTTCTCATTTGGTGGTTGGTCATCAGGATGGGAAACTGTATAATCGCACGGAGAAATCAAGTTCAGAATTAGATGATATGCCAAGTATCTCCAGCTGGCACAGTGAAGAGAAACACAAGCATTATCATAGAAGCTCCAGAAAGCAAAATGAAAGAAGAGAGCAGTGTGACAGTGATAAACACAAACACTATCATAGAAGCTCCAGATATCAAAAGGAAAGAAGAGAGCAGTGTGGTAGTGATACTAGTCGGAGTCATCATCAAAATATTGAGAAAGATGATAAGAGAAATGGAATTCGGCATAATAACAAAAGGCACAAACATCACAGTAACTCAGGATCTGGTTTAGAACACAGTGTTTCCAGTGATAAGAAGCTACAGAAAGGGAGCAGTCACAATTTTAGAAAATCTGAGCACAATGCAAAGTCTAGTGTTGATGAGCGCAGTCATGACAGATGGAAAATGGTTAGTGGGTCAGATGAAGATAGTGGAGAAGATTATCGGTACTGTAAAGAGAAAAGGGTAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001701 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006275 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006974 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009790 GO:0009792 GO:0009888 GO:0009889 GO:0009987 GO:0010556 GO:0016567 GO:0016604 GO:0016607 GO:0016740 GO:0019219 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0019900 GO:0019901 GO:0019941 GO:0030163 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032446 GO:0032501 GO:0032502 GO:0032991 GO:0033554 GO:0035264 GO:0036211 GO:0040007 GO:0043009 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0048513 GO:0048568 GO:0048589 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051171 GO:0051603 GO:0051716 GO:0060255 GO:0060429 GO:0061053 GO:0061630 GO:0061659 GO:0065007 GO:0070013 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:2000112

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DWNN zf-C3HC4_2 zf-CCHC

Protein Analysis

813

Amino Acids

91.67

Weight (kDa)

6.91

Isoelectric Point (pI)

60.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DWNN	PF08783	3 - 77	3e-19	DWNN domain
zf-C3HC4_2	PF13923	212 - 251	1.2e-08	Zinc finger, C3HC4 type (RING finger)
zf-C3HC4	PF00097	213 - 251	5e-06	Zinc finger, C3HC4 type (RING finger)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009656)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g31120 FvH4_2g31120 FvH4_2g31120 FvH4_2g31120 FvH4_2g31120 FvH4_2g31120
malus_domestica	MD08G1070600.v1.1 MD15G1051500.v1.1
prunus_persica	Prupe.1G405500_v2.0.a1 Prupe.1G405500_v2.0.a1 Prupe.1G405500_v2.0.a1
pyrus_communis	pycom08g05840 pycom15g04930
rosa_chinensis	RchiOBHm_Chr6g0311661
rosa_laevigata	RLG00000010383
rosa_roxburghii	Rroxscaffold_7G00157400
rosa_rugosa	Rorug06G0390500.1
rosa_samantha	Rh6AG505800 Rh6BG516600 Rh6CG522500 Rh6DG508200
rosa_wichuraiana	Rw6G044020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1229
Acc36I	ACCTGC	1 cut(s)	1229
AccB7I	CCANNNNNTGG	2 cut(s)	416, 1574
AccI	GTMKAC	4 cut(s)	48, 306, 712, 1794
AccII	CGCG	1 cut(s)	75
AciI	CCGC	5 cut(s)	5, 73, 103, 201, 287
AclWI	GGATC	7 cut(s)	244, 587, 985, 1293, 1498, 1665, 2257
AcsI	RAATTY	9 cut(s)	17, 35, 192, 835, 894, 1064, 1649, 1699, 2205
AcuI	CTGAAG	1 cut(s)	1889
AdeI	CACNNNGTG	1 cut(s)	512
AfaI	GTAC	3 cut(s)	173, 243, 2417
AfiI	CCNNNNNNNGG	5 cut(s)	416, 446, 968, 1574, 1619
AflIII	ACRYGT	2 cut(s)	244, 330
AgeI	ACCGGT	1 cut(s)	161
AhlI	ACTAGT	2 cut(s)	479, 2156
AjiI	CACGTC	1 cut(s)	331
AjnI	CCWGG	4 cut(s)	277, 493, 1399, 1567
Alw21I	GWGCWC	1 cut(s)	2328
Alw26I	GTCTC	5 cut(s)	293, 834, 916, 1098, 1843
AlwI	GGATC	7 cut(s)	244, 587, 985, 1293, 1498, 1665, 2257
AlwNI	CAGNNNCTG	2 cut(s)	1001, 2252
Ama87I	CYCGRG	1 cut(s)	344
AoxI	GGCC	2 cut(s)	548, 1217
ApeKI	GCWGC	3 cut(s)	684, 724, 1145
ApoI	RAATTY	9 cut(s)	17, 35, 192, 835, 894, 1064, 1649, 1699, 2205
AsiGI	ACCGGT	1 cut(s)	161
Asp700I	GAANNNNTTC	1 cut(s)	502
AspLEI	GCGC	2 cut(s)	1033, 2355
AsuC2I	CCSGG	1 cut(s)	399
AsuHPI	GGTGA	2 cut(s)	1005, 1634
AvaI	CYCGRG	1 cut(s)	344
AxyI	CCTNAGG	2 cut(s)	552, 1185
BanII	GRGCYC	1 cut(s)	1432
BarI	GAAGNNNNNNTAC	4 cut(s)	768, 800, 1593, 1625
BauI	CACGAG	1 cut(s)	1122
BbsI	GAAGAC	5 cut(s)	136, 570, 1632, 1740, 1895
Bbv12I	GWGCWC	1 cut(s)	2328
BbvI	GCAGC	3 cut(s)	671, 711, 1157
BccI	CCATC	9 cut(s)	577, 631, 875, 967, 1094, 1418, 1555, 1934, 2361
BceAI	ACGGC	2 cut(s)	1018, 1843
BciT130I	CCWGG	4 cut(s)	279, 495, 1401, 1569
BciVI	GTATCC	3 cut(s)	345, 1103, 1574
BcnI	CCSGG	1 cut(s)	399
BcoDI	GTCTC	5 cut(s)	293, 834, 916, 1098, 1843
BcuI	ACTAGT	2 cut(s)	479, 2156
BfaI	CTAG	3 cut(s)	480, 2157, 2340
BfmI	CTRYAG	4 cut(s)	231, 391, 1236, 2288
BfuAI	ACCTGC	1 cut(s)	1229
BfuI	GTATCC	3 cut(s)	345, 1103, 1574
BglII	AGATCT	2 cut(s)	778, 1841
BisI	GCNGC	4 cut(s)	202, 685, 725, 1146
BlpI	GCTNAGC	1 cut(s)	991
BlsI	GCNGC	4 cut(s)	203, 686, 726, 1147
Bme1390I	CCNGG	5 cut(s)	279, 399, 495, 1401, 1569
BmeT110I	CYCGRG	1 cut(s)	344
BmgBI	CACGTC	1 cut(s)	331
BmiI	GGNNCC	4 cut(s)	276, 438, 1131, 1309
BmrFI	CCNGG	5 cut(s)	279, 399, 495, 1401, 1569
BmrI	ACTGGG	2 cut(s)	1429, 1747
BmsI	GCATC	6 cut(s)	364, 376, 429, 475, 1018, 1756
BmuI	ACTGGG	2 cut(s)	1429, 1747
BpiI	GAAGAC	5 cut(s)	136, 570, 1632, 1740, 1895
BpmI	CTGGAG	5 cut(s)	861, 1804, 1987, 2032, 2098
Bpu1102I	GCTNAGC	1 cut(s)	991
BpuEI	CTTGAG	1 cut(s)	749
BpuMI	CCSGG	1 cut(s)	399
Bsa29I	ATCGAT	2 cut(s)	1098, 1562
BsaBI	GATNNNNATC	2 cut(s)	135, 1860
BsaJI	CCNNGG	4 cut(s)	278, 345, 1162, 1223
BsaWI	WCCGGW	1 cut(s)	161
BsaXI	ACNNNNNCTCC	2 cut(s)	932, 962
Bsc4I	CCNNNNNNNGG	5 cut(s)	416, 446, 968, 1574, 1619
Bse118I	RCCGGY	1 cut(s)	161
Bse1I	ACTGG	8 cut(s)	421, 1337, 1347, 1424, 1624, 1742, 1821, 2274
Bse21I	CCTNAGG	2 cut(s)	552, 1185
Bse3DI	GCAATG	1 cut(s)	816
Bse8I	GATNNNNATC	2 cut(s)	135, 1860
BseBI	CCWGG	4 cut(s)	279, 495, 1401, 1569
BseCI	ATCGAT	2 cut(s)	1098, 1562
BseDI	CCNNGG	4 cut(s)	278, 345, 1162, 1223
BseJI	GATNNNNATC	2 cut(s)	135, 1860
BseLI	CCNNNNNNNGG	5 cut(s)	416, 446, 968, 1574, 1619
BseMI	GCAATG	1 cut(s)	816
BseMII	CTCAG	5 cut(s)	543, 1176, 1859, 2259, 2313
BseNI	ACTGG	8 cut(s)	421, 1337, 1347, 1424, 1624, 1742, 1821, 2274
BseRI	GAGGAG	1 cut(s)	1693
BseXI	GCAGC	3 cut(s)	671, 711, 1157
Bsh1236I	CGCG	1 cut(s)	75
BshFI	GGCC	2 cut(s)	550, 1219
BshTI	ACCGGT	1 cut(s)	161
BshVI	ATCGAT	2 cut(s)	1098, 1562
BsiHKAI	GWGCWC	1 cut(s)	2328
BsiHKCI	CYCGRG	1 cut(s)	344
BsiSI	CCGG	2 cut(s)	162, 398
BslFI	GGGAC	1 cut(s)	490
BslI	CCNNNNNNNGG	5 cut(s)	416, 446, 968, 1574, 1619
BsmAI	GTCTC	5 cut(s)	293, 834, 916, 1098, 1843
BsmBI	CGTCTC	1 cut(s)	1098
BsmFI	GGGAC	1 cut(s)	490
BsnI	GGCC	2 cut(s)	550, 1219
BsoBI	CYCGRG	1 cut(s)	344
Bsp1286I	GDGCHC	2 cut(s)	1432, 2328
Bsp1720I	GCTNAGC	1 cut(s)	991
BspACI	CCGC	5 cut(s)	5, 73, 103, 201, 287
BspANI	GGCC	2 cut(s)	550, 1219
BspCNI	CTCAG	5 cut(s)	544, 1177, 1858, 2258, 2314
BspDI	ATCGAT	2 cut(s)	1098, 1562
BspFNI	CGCG	1 cut(s)	75
BspHI	TCATGA	1 cut(s)	2359
BspLI	GGNNCC	4 cut(s)	276, 438, 1131, 1309
BspMAI	CTGCAG	3 cut(s)	235, 395, 1240
BspMI	ACCTGC	1 cut(s)	1229
BspPI	GGATC	7 cut(s)	244, 587, 985, 1293, 1498, 1665, 2257
BspQI	GCTCTTC	1 cut(s)	495
BsrDI	GCAATG	1 cut(s)	816
BsrFI	RCCGGY	1 cut(s)	161
BsrI	ACTGG	8 cut(s)	421, 1337, 1347, 1424, 1624, 1742, 1821, 2274
BssAI	RCCGGY	1 cut(s)	161
BssECI	CCNNGG	4 cut(s)	278, 345, 1162, 1223
BssNAI	GTATAC	1 cut(s)	713
BssSI	CACGAG	1 cut(s)	1122
BssT1I	CCWWGG	2 cut(s)	1162, 1223
Bst1107I	GTATAC	1 cut(s)	713
Bst2BI	CACGAG	1 cut(s)	1122
Bst2UI	CCWGG	4 cut(s)	279, 495, 1401, 1569
Bst6I	CTCTTC	5 cut(s)	495, 1614, 2013, 2062, 2128
BstAPI	GCANNNNNTGC	1 cut(s)	1001
BstC8I	GCNNGC	6 cut(s)	391, 441, 689, 807, 1175, 2009
BstDEI	CTNAG	8 cut(s)	552, 747, 800, 991, 1185, 1845, 2245, 2322
BstENI	CCTNNNNNAGG	1 cut(s)	966
BstFNI	CGCG	1 cut(s)	75
BstHHI	GCGC	2 cut(s)	1033, 2355
BstMAI	GTCTC	5 cut(s)	293, 834, 916, 1098, 1843
BstMWI	GCNNNNNNNGC	2 cut(s)	645, 1001
BstNI	CCWGG	4 cut(s)	279, 495, 1401, 1569
BstNSI	RCATGY	3 cut(s)	248, 1060, 1540
BstSCI	CCNGG	5 cut(s)	277, 397, 493, 1399, 1567
BstSFI	CTRYAG	4 cut(s)	231, 391, 1236, 2288
BstUI	CGCG	1 cut(s)	75
BstV1I	GCAGC	3 cut(s)	671, 711, 1157
BstV2I	GAAGAC	5 cut(s)	136, 570, 1632, 1740, 1895
BstX2I	RGATCY	5 cut(s)	778, 977, 1657, 1841, 2249
BstXI	CCANNNNNNTGG	1 cut(s)	1419
BstYI	RGATCY	5 cut(s)	778, 977, 1657, 1841, 2249
BstZ17I	GTATAC	1 cut(s)	713
Bsu15I	ATCGAT	2 cut(s)	1098, 1562
Bsu36I	CCTNAGG	2 cut(s)	552, 1185
BsuI	GTATCC	3 cut(s)	345, 1103, 1574
BsuRI	GGCC	2 cut(s)	550, 1219
BsuTUI	ATCGAT	2 cut(s)	1098, 1562
BtrI	CACGTC	1 cut(s)	331
BtsI	GCAGTG	2 cut(s)	2081, 2147
BtsIMutI	CAGTG	8 cut(s)	843, 1828, 2020, 2081, 2089, 2147, 2272, 2281
BveI	ACCTGC	1 cut(s)	1229
Cac8I	GCNNGC	6 cut(s)	391, 441, 689, 807, 1175, 2009
CaiI	CAGNNNCTG	2 cut(s)	1001, 2252
CciI	TCATGA	1 cut(s)	2359
CfoI	GCGC	2 cut(s)	1033, 2355
Cfr10I	RCCGGY	1 cut(s)	161
ClaI	ATCGAT	2 cut(s)	1098, 1562
Csp6I	GTAC	3 cut(s)	172, 242, 2416
CspAI	ACCGGT	1 cut(s)	161
CviAII	CATG	9 cut(s)	245, 509, 1057, 1475, 1498, 1537, 1552, 1585, 2360
CviQI	GTAC	3 cut(s)	172, 242, 2416
DdeI	CTNAG	8 cut(s)	552, 747, 800, 991, 1185, 1845, 2245, 2322
DraIII	CACNNNGTG	1 cut(s)	512
Eam1104I	CTCTTC	5 cut(s)	495, 1614, 2013, 2062, 2128
EarI	CTCTTC	5 cut(s)	495, 1614, 2013, 2062, 2128
EciI	GGCGGA	2 cut(s)	92, 276
Eco130I	CCWWGG	2 cut(s)	1162, 1223
Eco147I	AGGCCT	1 cut(s)	550
Eco24I	GRGCYC	1 cut(s)	1432
Eco32I	GATATC	1 cut(s)	2120
Eco57I	CTGAAG	1 cut(s)	1889
Eco81I	CCTNAGG	2 cut(s)	552, 1185
Eco88I	CYCGRG	1 cut(s)	344
EcoNI	CCTNNNNNAGG	1 cut(s)	966
EcoRI	GAATTC	2 cut(s)	894, 2205
EcoRII	CCWGG	4 cut(s)	277, 493, 1399, 1567
EcoRV	GATATC	1 cut(s)	2120
EcoT14I	CCWWGG	2 cut(s)	1162, 1223
EcoT38I	GRGCYC	1 cut(s)	1432
ErhI	CCWWGG	2 cut(s)	1162, 1223
Esp3I	CGTCTC	1 cut(s)	1098
FaeI	CATG	9 cut(s)	248, 512, 1060, 1478, 1501, 1540, 1555, 1588, 2363
FaqI	GGGAC	1 cut(s)	490
FatI	CATG	9 cut(s)	244, 508, 1056, 1474, 1497, 1536, 1551, 1584, 2359
FauNDI	CATATG	1 cut(s)	1135
FblI	GTMKAC	4 cut(s)	48, 306, 712, 1794
Fnu4HI	GCNGC	4 cut(s)	202, 685, 725, 1146
FriOI	GRGCYC	1 cut(s)	1432
Fsp4HI	GCNGC	4 cut(s)	202, 685, 725, 1146
FspBI	CTAG	3 cut(s)	480, 2157, 2340
GlaI	GCGC	2 cut(s)	1032, 2354
GluI	GCNGC	4 cut(s)	202, 685, 725, 1146
GsuI	CTGGAG	5 cut(s)	861, 1804, 1987, 2032, 2098
HaeIII	GGCC	2 cut(s)	550, 1219
HapII	CCGG	2 cut(s)	162, 398
HhaI	GCGC	2 cut(s)	1033, 2355
Hin1II	CATG	9 cut(s)	248, 512, 1060, 1478, 1501, 1540, 1555, 1588, 2363
Hin6I	GCGC	2 cut(s)	1031, 2353
HinP1I	GCGC	2 cut(s)	1031, 2353
HincII	GTYRAC	3 cut(s)	49, 307, 328
HindII	GTYRAC	3 cut(s)	49, 307, 328
HpaII	CCGG	2 cut(s)	162, 398
HphI	GGTGA	2 cut(s)	1005, 1634
Hpy166II	GTNNAC	7 cut(s)	49, 174, 307, 328, 713, 1352, 1795
Hpy8I	GTNNAC	7 cut(s)	49, 174, 307, 328, 713, 1352, 1795
Hpy99I	CGWCG	1 cut(s)	50
HpyAV	CCTTC	4 cut(s)	50, 364, 727, 1658
HpyCH4IV	ACGT	2 cut(s)	330, 715
HpyF10VI	GCNNNNNNNGC	2 cut(s)	645, 1001
HpyF3I	CTNAG	8 cut(s)	552, 747, 800, 991, 1185, 1845, 2245, 2322
HpySE526I	ACGT	2 cut(s)	330, 715
Hsp92II	CATG	9 cut(s)	248, 512, 1060, 1478, 1501, 1540, 1555, 1588, 2363
HspAI	GCGC	2 cut(s)	1031, 2353
LguI	GCTCTTC	1 cut(s)	495
LmnI	GCTCC	9 cut(s)	436, 814, 880, 1135, 1313, 1519, 2051, 2117, 2298
Lsp1109I	GCAGC	3 cut(s)	671, 711, 1157
LweI	GCATC	6 cut(s)	364, 376, 429, 475, 1018, 1756
MaeI	CTAG	3 cut(s)	480, 2157, 2340
MaeII	ACGT	2 cut(s)	330, 715
MaeIII	GTNAC	5 cut(s)	1007, 1823, 2078, 2240, 2303
MflI	RGATCY	5 cut(s)	778, 977, 1657, 1841, 2249
MhlI	GDGCHC	2 cut(s)	1432, 2328
MlyI	GAGTC	4 cut(s)	146, 836, 950, 2173
MmeI	TCCRAC	2 cut(s)	174, 2141
MroXI	GAANNNNTTC	1 cut(s)	502
MseI	TTAA	3 cut(s)	570, 839, 1322
MslI	CAYNNNNRTG	5 cut(s)	507, 513, 1044, 1589, 1938
MspA1I	CMGCKG	1 cut(s)	2007
MspI	CCGG	2 cut(s)	162, 398
MspR9I	CCNGG	5 cut(s)	279, 399, 495, 1401, 1569
MvaI	CCWGG	4 cut(s)	279, 495, 1401, 1569
MvnI	CGCG	1 cut(s)	75
MwoI	GCNNNNNNNGC	2 cut(s)	645, 1001
NciI	CCSGG	1 cut(s)	399
NdeI	CATATG	1 cut(s)	1135
NlaIII	CATG	9 cut(s)	248, 512, 1060, 1478, 1501, 1540, 1555, 1588, 2363
NlaIV	GGNNCC	4 cut(s)	276, 438, 1131, 1309
NmuCI	GTSAC	4 cut(s)	1007, 1823, 2078, 2303
NspI	RCATGY	3 cut(s)	248, 1060, 1540
PagI	TCATGA	1 cut(s)	2359
PaqCI	CACCTGC	1 cut(s)	1229
PceI	AGGCCT	1 cut(s)	550
PciI	ACATGT	1 cut(s)	244
PciSI	GCTCTTC	1 cut(s)	495
PcsI	WCGNNNNNNNCGW	3 cut(s)	45, 147, 336
PdmI	GAANNNNTTC	1 cut(s)	502
PfeI	GAWTC	6 cut(s)	41, 131, 283, 887, 998, 1564
PflFI	GACNNNGTC	1 cut(s)	541
PflMI	CCANNNNNTGG	2 cut(s)	416, 1574
PfoI	TCCNGGA	1 cut(s)	493
PinAI	ACCGGT	1 cut(s)	161
PkrI	GCNGC	4 cut(s)	203, 686, 726, 1147
PleI	GAGTC	4 cut(s)	146, 835, 949, 2172
PpsI	GAGTC	4 cut(s)	146, 835, 949, 2172
PscI	ACATGT	1 cut(s)	244
Psp6I	CCWGG	4 cut(s)	277, 493, 1399, 1567
PspGI	CCWGG	4 cut(s)	277, 493, 1399, 1567
PspN4I	GGNNCC	4 cut(s)	276, 438, 1131, 1309
PsrI	GAACNNNNNNTAC	2 cut(s)	513, 545
PstI	CTGCAG	3 cut(s)	235, 395, 1240
PstNI	CAGNNNCTG	2 cut(s)	1001, 2252
PsuI	RGATCY	5 cut(s)	778, 977, 1657, 1841, 2249
PsyI	GACNNNGTC	1 cut(s)	541
PvuII	CAGCTG	1 cut(s)	2007
RsaI	GTAC	3 cut(s)	173, 243, 2417
RsaNI	GTAC	3 cut(s)	172, 242, 2416
RseI	CAYNNNNRTG	5 cut(s)	507, 513, 1044, 1589, 1938
SalI	GTCGAC	2 cut(s)	47, 305
SapI	GCTCTTC	1 cut(s)	495
SaqAI	TTAA	3 cut(s)	570, 839, 1322
SatI	GCNGC	4 cut(s)	202, 685, 725, 1146
SbfI	CCTGCAGG	1 cut(s)	235
SchI	GAGTC	4 cut(s)	146, 836, 950, 2173
ScrFI	CCNGG	5 cut(s)	279, 399, 495, 1401, 1569
SdaI	CCTGCAGG	1 cut(s)	235
SduI	GDGCHC	2 cut(s)	1432, 2328
SfaNI	GCATC	6 cut(s)	364, 376, 429, 475, 1018, 1756
SfcI	CTRYAG	4 cut(s)	231, 391, 1236, 2288
SmiMI	CAYNNNNRTG	5 cut(s)	507, 513, 1044, 1589, 1938
SmlI	CTYRAG	1 cut(s)	728
SmoI	CTYRAG	1 cut(s)	728
SpeI	ACTAGT	2 cut(s)	479, 2156
Sse8387I	CCTGCAGG	1 cut(s)	235
SseBI	AGGCCT	1 cut(s)	550
SsiI	CCGC	5 cut(s)	5, 73, 103, 201, 287
SspI	AATATT	1 cut(s)	2179
SspMI	CTAG	3 cut(s)	480, 2157, 2340
StuI	AGGCCT	1 cut(s)	550
StyD4I	CCNGG	5 cut(s)	277, 397, 493, 1399, 1567
StyI	CCWWGG	2 cut(s)	1162, 1223
TaiI	ACGT	2 cut(s)	333, 718
TaqI	TCGA	7 cut(s)	39, 48, 54, 61, 306, 1098, 1562
TatI	WGTACW	1 cut(s)	171
TauI	GCSGC	1 cut(s)	204
TfiI	GAWTC	6 cut(s)	41, 131, 283, 887, 998, 1564
Tru1I	TTAA	3 cut(s)	570, 839, 1322
Tru9I	TTAA	3 cut(s)	570, 839, 1322
TscAI	CASTG	8 cut(s)	850, 1828, 2020, 2081, 2089, 2147, 2272, 2281
TseFI	GTSAC	4 cut(s)	1007, 1823, 2078, 2303
TseI	GCWGC	3 cut(s)	684, 724, 1145
Tsp45I	GTSAC	4 cut(s)	1007, 1823, 2078, 2303
TspDTI	ATGAA	8 cut(s)	420, 647, 1355, 1517, 1746, 1880, 2076, 2406
TspGWI	ACGGA	6 cut(s)	34, 186, 199, 1122, 1482, 1976
TspRI	CASTG	8 cut(s)	850, 1828, 2020, 2081, 2089, 2147, 2272, 2281
Tth111I	GACNNNGTC	1 cut(s)	541
Van91I	CCANNNNNTGG	2 cut(s)	416, 1574
XagI	CCTNNNNNAGG	1 cut(s)	966
XapI	RAATTY	9 cut(s)	17, 35, 192, 835, 894, 1064, 1649, 1699, 2205
XceI	RCATGY	3 cut(s)	248, 1060, 1540
XmiI	GTMKAC	4 cut(s)	48, 306, 712, 1794
XmnI	GAANNNNTTC	1 cut(s)	502
XspI	CTAG	3 cut(s)	480, 2157, 2340

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.