Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0009656

Physical Location & Seq

Genomic Coordinates Forward (+)

35654413 .. 35661283

Gene Structure 6871 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G405500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2382 bp

ATGGCGGTTCAGTTCAAATTCCGAAGCTCCATGAACTTCGACTCGGTCGATATCGACGGCCGAACCTCCATATCAATTCGCGATCTCAAATCGAAGATAATTTGCCACAAGAACCTCAATATATGCCAAGACACCGATCTCGTATTCTCTGATGCGATAACTGGTCAAGAGTACACTGACGAGAATATTCAAATTCCGCGTGGTTCTAGCGTGATAATCAAGAGAGTGCCCGCAGGATCAGTTCACGCGGATGTTGGCAAGCCTCACTTCAACTCATATCAGAATCTTCATAGCAAGGACTCTGTGAATGTTAAATCACTTGTTTCAGCGAATGTGGAGACTGTTGACTTTGATGACTTTGGGGTTGACTTGTTTCCCATTCCTAGGGCAACCTTTTTCAGTTCTGATATGGATGCGGACAAGGATACCTGCATCCTTGATTATGAGCCAAATACTGACAACAAAAGATATTCAGAGCAAGCTGTGGGAGGAGGCCGTAAGCTTGAAGCAAGTGGCCTTAGTGATGCTATTCCAGAAGGTCATGTACATAGTGGCGTTGAGCACACCGTACCACAGACAAAACCAAATCCTGACGAAGACATGAATCTGGAAAAGTTGGGTAGTGTGAATCCCATAGATACCCGGCATGCTGATTTGTCATCAGAGCTGAAATGCTCTTTATGCTACTCAATTTTCAAGGAGGCCATGATGATACCATGCTGCCAGCACAGTTTTTGTGAGAAATGCATTTGTCAAGTGCTGCTTGAGAAGGCAAGATGTCCGAAGTGTTTTTCGACTAAATGCAGAGTTGATGATTTGCTACCGAATGTATCACTTAGGCAAGCAATTGAGCATTTCCTAGAATCTCAAAATTTAATCACTGGTCCAGATAATGATTGCTGCCAATATGCTCCAGATGGCGAATCTGGAATTCAGGCAAAAGATGTGTCTTGTGGTGGTTGTATCTTACAAAGAGAGTCAGAGTTGCCTCAATCTCCTGAAACAGGGATGGGATCTAATCATTTCTTCGCAGAATCTGCTCATATCCCAGCCTTCAAAGAAGATGCACCTAACCATTTGGGTGCAAAAAACTTTCTAAAAAGACACGGTTCTACTCGTATCGTTCCTGATGGCTTGGCAGCCTTTGATGATTGCCAAGGAGAAAGCAAGCCTATGCATAAGCAAGCTGAACCCACAATAAAGAAAAAGAGGCCACCTTGGGTTTGCACAGCAGGTGGTGACAAGAGTTTCTTGGGGACTGGAAAGCACAGAAAGGGGGAACGTACCTGTTACATGTGTGGGGCTCCAGACCATTTCATAAGAGACTGTCCAGTTGCTTCAAGTCCACATCCTATGCTTCATGCAGGAAATGCAATCTTTCCAGGAGTTATGCCAGGTTGTGTACCATCATACTGGAATGGGGCTCCCTCGCCTCATGCCCAGCCCTTTAGAAATCCATATGGAAATCATGTGATGACTGCTTTTGATACAAGTCTGGTCCCTCCTGCTCCTTTTGCTGCTCCTACATACATGGCATCTATGTATCATAACTCGTTTCCTGCCTTTGGTGGATATATGAGGATGCGAGGTGTCACTCCTCTTCGAGGAACGGGTGAAGACTGCAATTTAACTCATCCAGAGTTCCTGGATCTTCAAGGTCGGGAAAAGAGAAGAAAATTTTCAAATGAGAATTCAAAGAGAGAACAATCTCATGATGGTGCCGAAGACCGTGATTTAAACAAGAGGCATTACTGTACTGGGACAGAAAGATTGGATGACCATAAATCTTGTATAAACAAAGAAAAGAGTACAAGTTACTCTGAGGACGGCTCTACTAAAGGGTCCCAGAGGCAATATCGGCATCATAATCACACAGATGATGACATGCTCTCAATTGATGGTCAGCGGAAGAGTTCTCATTTGGTGGTTGGTGGTAGAGATCAGAAGCAGTATCATCGCACAGAGAGATCAAGTTCAGAAGTAGATGATATGCCAAGTAGCAGTTGCCACAGTGAAGAGAAACACAAATACTATCATAGAAGCTCCAAAAAGTATAGGGAAAGAGGAGAACCGTGTGGCAGTGGTTCCAGCCGGAGTCATCATCAAAGTATGAGTAAGAAAGATGATCACAGGAAAAGGATTGAGCACGATTTCAAAAGGCACAGTCAGAAGCATCACAGCCACTCAGGATCCGGCATAGAACAGAGTGTTTCCAGTGATAAGAAGTTGCATAAAGGGAGCAGTCGCAGTTCTAGACATTCTAAGCACAGTGCAAAGAGTAATGTTGATGAGCTGAGTCATGACAGGTGGCAGATGGCTAGTGGGTCCGATGAAGATGGTGCAGAAGGTTATCAGTATTGTAGACGGAAAAGAAAACACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001701 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006275 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006974 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009790 GO:0009792 GO:0009888 GO:0009889 GO:0009987 GO:0010556 GO:0016567 GO:0016604 GO:0016607 GO:0016740 GO:0019219 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0019900 GO:0019901 GO:0019941 GO:0030163 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032446 GO:0032501 GO:0032502 GO:0032991 GO:0033554 GO:0035264 GO:0036211 GO:0040007 GO:0043009 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0048513 GO:0048568 GO:0048589 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051171 GO:0051603 GO:0051716 GO:0060255 GO:0060429 GO:0061053 GO:0061630 GO:0061659 GO:0065007 GO:0070013 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:2000112

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DWNN zf-C3HC4_2 zf-CCHC

Protein Analysis

794

Amino Acids

88.66

Weight (kDa)

7.28

Isoelectric Point (pI)

51.21

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009656)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g31120 FvH4_2g31120 FvH4_2g31120 FvH4_2g31120 FvH4_2g31120 FvH4_2g31120
malus_domestica	MD08G1070600.v1.1 MD15G1051500.v1.1
prunus_persica	Prupe.1G405500_v2.0.a1 Prupe.1G405500_v2.0.a1 Prupe.1G405500_v2.0.a1
pyrus_communis	pycom08g05840 pycom15g04930
rosa_chinensis	RchiOBHm_Chr6g0311661
rosa_laevigata	RLG00000010383
rosa_roxburghii	Rroxscaffold_7G00157400
rosa_rugosa	Rorug06G0390500.1
rosa_samantha	Rh6AG505800 Rh6BG516600 Rh6CG522500 Rh6DG508200
rosa_wichuraiana	Rw6G044020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1223
Acc36I	ACCTGC	2 cut(s)	437, 1223
AccB1I	GGYRCC	1 cut(s)	1718
AccI	GTMKAC	1 cut(s)	2362
AccII	CGCG	3 cut(s)	81, 199, 248
AciI	CCGC	6 cut(s)	5, 197, 231, 248, 416, 1906
AclWI	GGATC	5 cut(s)	244, 1021, 1656, 2184, 2197
AcoI	YGGCCR	1 cut(s)	58
AcsI	RAATTY	6 cut(s)	17, 192, 871, 930, 1676, 1690
AfaI	GTAC	7 cut(s)	173, 546, 570, 1285, 1404, 1756, 1810
AfiI	CCNNNNNNNGG	4 cut(s)	384, 1004, 1565, 1604
AflIII	ACRYGT	1 cut(s)	1293
AjnI	CCWGG	3 cut(s)	1381, 1393, 1644
AluBI	AGCT	7 cut(s)	27, 482, 502, 667, 1187, 2043, 2293
AluI	AGCT	7 cut(s)	27, 482, 502, 667, 1187, 2043, 2293
Alw21I	GWGCWC	2 cut(s)	564, 2148
Alw26I	GTCTC	2 cut(s)	332, 1317
AlwI	GGATC	5 cut(s)	244, 1021, 1656, 2184, 2197
AlwNI	CAGNNNCTG	1 cut(s)	1037
AoxI	GGCC	5 cut(s)	58, 493, 514, 702, 1211
ApeKI	GCWGC	5 cut(s)	720, 760, 900, 1139, 1517
ApoI	RAATTY	6 cut(s)	17, 192, 871, 930, 1676, 1690
ArsI	GACNNNNNNTTYG	2 cut(s)	932, 964
Asp700I	GAANNNNTTC	1 cut(s)	1678
AspA2I	CCTAGG	1 cut(s)	383
AspS9I	GGNCC	4 cut(s)	884, 1498, 1842, 2325
AsuC2I	CCSGG	1 cut(s)	643
AsuHPI	GGTGA	2 cut(s)	1250, 1625
AvaII	GGWCC	4 cut(s)	884, 1498, 1842, 2325
AvrII	CCTAGG	1 cut(s)	383
BaeGI	GKGCMC	1 cut(s)	231
BamHI	GGATCC	1 cut(s)	2189
BanI	GGYRCC	1 cut(s)	1718
BanII	GRGCYC	2 cut(s)	1306, 1426
BarI	GAAGNNNNNNTAC	2 cut(s)	528, 560
BbsI	GAAGAC	3 cut(s)	603, 1623, 1731
Bbv12I	GWGCWC	2 cut(s)	564, 2148
BbvI	GCAGC	5 cut(s)	707, 747, 887, 1151, 1504
BccI	CCATC	8 cut(s)	911, 1003, 1124, 1414, 1709, 1892, 2308, 2330
BceAI	ACGGC	3 cut(s)	73, 480, 1843
BcgI	CGANNNNNNTGC	2 cut(s)	1937, 1971
BciT130I	CCWGG	3 cut(s)	1383, 1395, 1646
BciVI	GTATCC	1 cut(s)	418
BclI	TGATCA	1 cut(s)	2125
BcnI	CCSGG	1 cut(s)	643
BcoDI	GTCTC	2 cut(s)	332, 1317
BfaI	CTAG	5 cut(s)	207, 384, 860, 2253, 2319
BfuAI	ACCTGC	2 cut(s)	437, 1223
BfuI	GTATCC	1 cut(s)	418
BisI	GCNGC	5 cut(s)	721, 761, 901, 1140, 1518
BlnI	CCTAGG	1 cut(s)	383
BlsI	GCNGC	5 cut(s)	722, 762, 902, 1141, 1519
Bme1390I	CCNGG	4 cut(s)	643, 1383, 1395, 1646
Bme18I	GGWCC	4 cut(s)	884, 1498, 1842, 2325
BmgT120I	GGNCC	4 cut(s)	884, 1498, 1842, 2325
BmiI	GGNNCC	9 cut(s)	1305, 1425, 1500, 1720, 1843, 1844, 2086, 2191, 2326
BmrFI	CCNGG	4 cut(s)	643, 1383, 1395, 1646
BmrI	ACTGGG	1 cut(s)	1767
BmsI	GCATC	9 cut(s)	142, 403, 441, 514, 1054, 1544, 1572, 1870, 2182
BmuI	ACTGGG	1 cut(s)	1767
BpiI	GAAGAC	3 cut(s)	603, 1623, 1731
BplI	GAGNNNNNCTC	2 cut(s)	1814, 1846
BpmI	CTGGAG	2 cut(s)	897, 1290
BpuEI	CTTGAG	1 cut(s)	785
BpuMI	CCSGG	1 cut(s)	643
BsaJI	CCNNGG	3 cut(s)	383, 1156, 1217
Bsc4I	CCNNNNNNNGG	4 cut(s)	384, 1004, 1565, 1604
Bse1I	ACTGG	7 cut(s)	166, 886, 1264, 1331, 1418, 1762, 2214
BseBI	CCWGG	3 cut(s)	1383, 1395, 1646
BseDI	CCNNGG	3 cut(s)	383, 1156, 1217
BseGI	GGATG	8 cut(s)	256, 418, 432, 1014, 1348, 1587, 1633, 1780
BseLI	CCNNNNNNNGG	4 cut(s)	384, 1004, 1565, 1604
BseMII	CTCAG	3 cut(s)	1812, 2199, 2285
BseNI	ACTGG	7 cut(s)	166, 886, 1264, 1331, 1418, 1762, 2214
BseRI	GAGGAG	3 cut(s)	504, 1587, 2079
BseSI	GKGCMC	1 cut(s)	231
BseX3I	CGGCCG	1 cut(s)	58
BseXI	GCAGC	5 cut(s)	707, 747, 887, 1151, 1504
BseYI	CCCAGC	2 cut(s)	1048, 1440
BsgI	GTGCAG	1 cut(s)	2361
Bsh1236I	CGCG	3 cut(s)	81, 199, 248
Bsh1285I	CGRYCG	2 cut(s)	48, 61
BshFI	GGCC	5 cut(s)	60, 495, 516, 704, 1213
BshNI	GGYRCC	1 cut(s)	1718
BsiEI	CGRYCG	2 cut(s)	48, 61
BsiHKAI	GWGCWC	2 cut(s)	564, 2148
BsiSI	CCGG	3 cut(s)	643, 2092, 2193
BslFI	GGGAC	4 cut(s)	1270, 1484, 1774, 1828
BslI	CCNNNNNNNGG	4 cut(s)	384, 1004, 1565, 1604
BsmAI	GTCTC	2 cut(s)	332, 1317
BsmFI	GGGAC	4 cut(s)	1270, 1484, 1774, 1828
BsnI	GGCC	5 cut(s)	60, 495, 516, 704, 1213
Bsp1286I	GDGCHC	5 cut(s)	231, 564, 1306, 1426, 2148
Bsp1407I	TGTACA	1 cut(s)	544
Bsp143I	GATC	9 cut(s)	82, 136, 236, 1013, 1648, 1939, 1967, 2125, 2189
Bsp68I	TCGCGA	1 cut(s)	81
BspACI	CCGC	6 cut(s)	5, 197, 231, 248, 416, 1906
BspANI	GGCC	5 cut(s)	60, 495, 516, 704, 1213
BspCNI	CTCAG	3 cut(s)	1813, 2198, 2286
BspFNI	CGCG	3 cut(s)	81, 199, 248
BspHI	TCATGA	2 cut(s)	1711, 2299
BspLI	GGNNCC	9 cut(s)	1305, 1425, 1500, 1720, 1843, 1844, 2086, 2191, 2326
BspMI	ACCTGC	2 cut(s)	437, 1223
BspPI	GGATC	5 cut(s)	244, 1021, 1656, 2184, 2197
BspT107I	GGYRCC	1 cut(s)	1718
BsrGI	TGTACA	1 cut(s)	544
BsrI	ACTGG	7 cut(s)	166, 886, 1264, 1331, 1418, 1762, 2214
BssECI	CCNNGG	3 cut(s)	383, 1156, 1217
BssMI	GATC	9 cut(s)	82, 136, 236, 1013, 1648, 1939, 1967, 2125, 2189
BssT1I	CCWWGG	3 cut(s)	383, 1156, 1217
Bst2UI	CCWGG	3 cut(s)	1383, 1395, 1646
Bst6I	CTCTTC	3 cut(s)	1605, 1904, 2010
BstAPI	GCANNNNNTGC	2 cut(s)	1037, 1370
BstAUI	TGTACA	1 cut(s)	544
BstC8I	GCNNGC	8 cut(s)	231, 260, 480, 648, 725, 843, 1169, 1185
BstDEI	CTNAG	6 cut(s)	518, 836, 1821, 2185, 2262, 2294
BstENI	CCTNNNNNAGG	2 cut(s)	1002, 1602
BstF5I	GGATG	8 cut(s)	256, 418, 432, 1014, 1348, 1587, 1633, 1780
BstFNI	CGCG	3 cut(s)	81, 199, 248
BstKTI	GATC	9 cut(s)	85, 139, 239, 1016, 1651, 1942, 1970, 2128, 2192
BstMAI	GTCTC	2 cut(s)	332, 1317
BstMBI	GATC	9 cut(s)	82, 136, 236, 1013, 1648, 1939, 1967, 2125, 2189
BstMCI	CGRYCG	2 cut(s)	48, 61
BstMWI	GCNNNNNNNGC	5 cut(s)	681, 1037, 1370, 1514, 1858
BstNI	CCWGG	3 cut(s)	1383, 1395, 1646
BstNSI	RCATGY	3 cut(s)	650, 1297, 1888
BstSCI	CCNGG	4 cut(s)	641, 1381, 1393, 1644
BstSLI	GKGCMC	1 cut(s)	231
BstUI	CGCG	3 cut(s)	81, 199, 248
BstV1I	GCAGC	5 cut(s)	707, 747, 887, 1151, 1504
BstV2I	GAAGAC	3 cut(s)	603, 1623, 1731
BstX2I	RGATCY	3 cut(s)	1013, 1648, 2189
BstXI	CCANNNNNNTGG	1 cut(s)	1413
BstYI	RGATCY	3 cut(s)	1013, 1648, 2189
BstZI	CGGCCG	1 cut(s)	58
BsuI	GTATCC	1 cut(s)	418
BsuRI	GGCC	5 cut(s)	60, 495, 516, 704, 1213
BtgZI	GCGATG	1 cut(s)	1940
BtsCI	GGATG	8 cut(s)	256, 418, 432, 1014, 1348, 1587, 1633, 1780
BtsI	GCAGTG	1 cut(s)	2086
BtsIMutI	CAGTG	7 cut(s)	174, 879, 2017, 2086, 2221, 2275, 2377
BtuMI	TCGCGA	1 cut(s)	81
BveI	ACCTGC	2 cut(s)	437, 1223
Cac8I	GCNNGC	8 cut(s)	231, 260, 480, 648, 725, 843, 1169, 1185
CaiI	CAGNNNCTG	1 cut(s)	1037
CciI	TCATGA	2 cut(s)	1711, 2299
Cfr13I	GGNCC	4 cut(s)	884, 1498, 1842, 2325
Csp6I	GTAC	7 cut(s)	172, 545, 569, 1284, 1403, 1755, 1809
CviQI	GTAC	7 cut(s)	172, 545, 569, 1284, 1403, 1755, 1809
DdeI	CTNAG	6 cut(s)	518, 836, 1821, 2185, 2262, 2294
DpnI	GATC	9 cut(s)	84, 138, 238, 1015, 1650, 1941, 1969, 2127, 2191
DpnII	GATC	9 cut(s)	82, 136, 236, 1013, 1648, 1939, 1967, 2125, 2189
DraI	TTTAAA	1 cut(s)	1737
EaeI	YGGCCR	1 cut(s)	58
EagI	CGGCCG	1 cut(s)	58
Eam1104I	CTCTTC	3 cut(s)	1605, 1904, 2010
EarI	CTCTTC	3 cut(s)	1605, 1904, 2010
EclXI	CGGCCG	1 cut(s)	58
Eco130I	CCWWGG	3 cut(s)	383, 1156, 1217
Eco24I	GRGCYC	2 cut(s)	1306, 1426
Eco32I	GATATC	1 cut(s)	52
Eco47I	GGWCC	4 cut(s)	884, 1498, 1842, 2325
Eco52I	CGGCCG	1 cut(s)	58
EcoNI	CCTNNNNNAGG	2 cut(s)	1002, 1602
EcoO109I	RGGNCCY	1 cut(s)	1842
EcoRI	GAATTC	2 cut(s)	930, 1690
EcoRII	CCWGG	3 cut(s)	1381, 1393, 1644
EcoRV	GATATC	1 cut(s)	52
EcoT14I	CCWWGG	3 cut(s)	383, 1156, 1217
EcoT22I	ATGCAT	2 cut(s)	749, 1179
EcoT38I	GRGCYC	2 cut(s)	1306, 1426
ErhI	CCWWGG	3 cut(s)	383, 1156, 1217
FalI	AAGNNNNNCTT	6 cut(s)	251, 283, 747, 779, 1235, 1267
FaqI	GGGAC	4 cut(s)	1270, 1484, 1774, 1828
FauI	CCCGC	1 cut(s)	238
FauNDI	CATATG	1 cut(s)	1459
FbaI	TGATCA	1 cut(s)	2125
FblI	GTMKAC	1 cut(s)	2362
Fnu4HI	GCNGC	5 cut(s)	721, 761, 901, 1140, 1518
FokI	GGATG	8 cut(s)	263, 419, 425, 1021, 1335, 1594, 1620, 1787
FriOI	GRGCYC	2 cut(s)	1306, 1426
Fsp4HI	GCNGC	5 cut(s)	721, 761, 901, 1140, 1518
FspBI	CTAG	5 cut(s)	207, 384, 860, 2253, 2319
GluI	GCNGC	5 cut(s)	721, 761, 901, 1140, 1518
GsaI	CCCAGC	2 cut(s)	1052, 1444
GsuI	CTGGAG	2 cut(s)	897, 1290
HaeIII	GGCC	5 cut(s)	60, 495, 516, 704, 1213
HapII	CCGG	3 cut(s)	643, 2092, 2193
HincII	GTYRAC	2 cut(s)	346, 367
HindII	GTYRAC	2 cut(s)	346, 367
HindIII	AAGCTT	1 cut(s)	500
HpaII	CCGG	3 cut(s)	643, 2092, 2193
HphI	GGTGA	2 cut(s)	1250, 1625
Hpy166II	GTNNAC	7 cut(s)	174, 244, 346, 367, 1346, 1403, 2363
Hpy8I	GTNNAC	7 cut(s)	174, 244, 346, 367, 1346, 1403, 2363
Hpy99I	CGWCG	1 cut(s)	59
HpyAV	CCTTC	4 cut(s)	530, 763, 1063, 2339
HpyCH4IV	ACGT	1 cut(s)	1282
HpyF10VI	GCNNNNNNNGC	5 cut(s)	681, 1037, 1370, 1514, 1858
HpyF3I	CTNAG	6 cut(s)	518, 836, 1821, 2185, 2262, 2294
HpySE526I	ACGT	1 cut(s)	1282
KflI	GGGWCCC	1 cut(s)	1842
Ksp22I	TGATCA	1 cut(s)	2125
Kzo9I	GATC	9 cut(s)	82, 136, 236, 1013, 1648, 1939, 1967, 2125, 2189
LmnI	GCTCC	8 cut(s)	32, 916, 1309, 1429, 1513, 1525, 2048, 2238
Lsp1109I	GCAGC	5 cut(s)	707, 747, 887, 1151, 1504
LweI	GCATC	9 cut(s)	142, 403, 441, 514, 1054, 1544, 1572, 1870, 2182
MaeI	CTAG	5 cut(s)	207, 384, 860, 2253, 2319
MaeII	ACGT	1 cut(s)	1282
MaeIII	GTNAC	4 cut(s)	1238, 1289, 1591, 1814
MalI	GATC	9 cut(s)	84, 138, 238, 1015, 1650, 1941, 1969, 2127, 2191
MboI	GATC	9 cut(s)	82, 136, 236, 1013, 1648, 1939, 1967, 2125, 2189
MfeI	CAATTG	2 cut(s)	846, 1893
MflI	RGATCY	3 cut(s)	1013, 1648, 2189
MhlI	GDGCHC	5 cut(s)	231, 564, 1306, 1426, 2148
MlyI	GAGTC	5 cut(s)	35, 293, 986, 2104, 2305
Mph1103I	ATGCAT	2 cut(s)	749, 1179
MroXI	GAANNNNTTC	1 cut(s)	1678
MseI	TTAA	4 cut(s)	312, 875, 1628, 1736
MslI	CAYNNNNRTG	4 cut(s)	249, 1080, 1716, 1875
MspA1I	CMGCKG	1 cut(s)	1906
MspI	CCGG	3 cut(s)	643, 2092, 2193
MspR9I	CCNGG	4 cut(s)	643, 1383, 1395, 1646
MunI	CAATTG	2 cut(s)	846, 1893
MvaI	CCWGG	3 cut(s)	1383, 1395, 1646
MvnI	CGCG	3 cut(s)	81, 199, 248
MwoI	GCNNNNNNNGC	5 cut(s)	681, 1037, 1370, 1514, 1858
NciI	CCSGG	1 cut(s)	643
NdeI	CATATG	1 cut(s)	1459
NdeII	GATC	9 cut(s)	82, 136, 236, 1013, 1648, 1939, 1967, 2125, 2189
NlaIV	GGNNCC	9 cut(s)	1305, 1425, 1500, 1720, 1843, 1844, 2086, 2191, 2326
NmuCI	GTSAC	2 cut(s)	1238, 1591
NruI	TCGCGA	1 cut(s)	81
NsiI	ATGCAT	2 cut(s)	749, 1179
NspI	RCATGY	3 cut(s)	650, 1297, 1888
PaeI	GCATGC	1 cut(s)	650
PagI	TCATGA	2 cut(s)	1711, 2299
PaqCI	CACCTGC	1 cut(s)	1223
PciI	ACATGT	1 cut(s)	1293
PcsI	WCGNNNNNNNCGW	1 cut(s)	45
PdmI	GAANNNNTTC	1 cut(s)	1678
PfeI	GAWTC	6 cut(s)	283, 604, 628, 863, 923, 1034
PflFI	GACNNNGTC	1 cut(s)	44
PfoI	TCCNGGA	2 cut(s)	1381, 1644
PkrI	GCNGC	5 cut(s)	722, 762, 902, 1141, 1519
PleI	GAGTC	5 cut(s)	35, 293, 985, 2103, 2304
PpsI	GAGTC	5 cut(s)	35, 293, 985, 2103, 2304
PpuMI	RGGWCCY	1 cut(s)	1842
PscI	ACATGT	1 cut(s)	1293
Psp5II	RGGWCCY	1 cut(s)	1842
Psp6I	CCWGG	3 cut(s)	1381, 1393, 1644
PspFI	CCCAGC	2 cut(s)	1048, 1440
PspGI	CCWGG	3 cut(s)	1381, 1393, 1644
PspN4I	GGNNCC	9 cut(s)	1305, 1425, 1500, 1720, 1843, 1844, 2086, 2191, 2326
PspPI	GGNCC	4 cut(s)	884, 1498, 1842, 2325
PspPPI	RGGWCCY	1 cut(s)	1842
PstNI	CAGNNNCTG	1 cut(s)	1037
PsuI	RGATCY	3 cut(s)	1013, 1648, 2189
PsyI	GACNNNGTC	1 cut(s)	44
RruI	TCGCGA	1 cut(s)	81
RsaI	GTAC	7 cut(s)	173, 546, 570, 1285, 1404, 1756, 1810
RsaNI	GTAC	7 cut(s)	172, 545, 569, 1284, 1403, 1755, 1809
RseI	CAYNNNNRTG	4 cut(s)	249, 1080, 1716, 1875
SaqAI	TTAA	4 cut(s)	312, 875, 1628, 1736
SatI	GCNGC	5 cut(s)	721, 761, 901, 1140, 1518
Sau3AI	GATC	9 cut(s)	82, 136, 236, 1013, 1648, 1939, 1967, 2125, 2189
Sau96I	GGNCC	4 cut(s)	884, 1498, 1842, 2325
SchI	GAGTC	5 cut(s)	35, 293, 986, 2104, 2305
ScrFI	CCNGG	4 cut(s)	643, 1383, 1395, 1646
SduI	GDGCHC	5 cut(s)	231, 564, 1306, 1426, 2148
SfaNI	GCATC	9 cut(s)	142, 403, 441, 514, 1054, 1544, 1572, 1870, 2182
SinI	GGWCC	4 cut(s)	884, 1498, 1842, 2325
SmiMI	CAYNNNNRTG	4 cut(s)	249, 1080, 1716, 1875
SmlI	CTYRAG	1 cut(s)	764
SmoI	CTYRAG	1 cut(s)	764
SphI	GCATGC	1 cut(s)	650
SsiI	CCGC	6 cut(s)	5, 197, 231, 248, 416, 1906
SspI	AATATT	1 cut(s)	187
SspMI	CTAG	5 cut(s)	207, 384, 860, 2253, 2319
StyD4I	CCNGG	4 cut(s)	641, 1381, 1393, 1644
StyI	CCWWGG	3 cut(s)	383, 1156, 1217
TaiI	ACGT	1 cut(s)	1285
TaqI	TCGA	6 cut(s)	39, 48, 54, 92, 794, 1603
TaqII	GACCGA	1 cut(s)	34
TatI	WGTACW	4 cut(s)	171, 544, 1754, 1808
TfiI	GAWTC	6 cut(s)	283, 604, 628, 863, 923, 1034
Tru1I	TTAA	4 cut(s)	312, 875, 1628, 1736
Tru9I	TTAA	4 cut(s)	312, 875, 1628, 1736
TscAI	CASTG	6 cut(s)	181, 886, 2017, 2086, 2221, 2275
TseFI	GTSAC	2 cut(s)	1238, 1591
TseI	GCWGC	5 cut(s)	720, 760, 900, 1139, 1517
Tsp45I	GTSAC	2 cut(s)	1238, 1591
TspDTI	ATGAA	6 cut(s)	47, 278, 617, 1306, 1349, 2346
TspGWI	ACGGA	1 cut(s)	2380
TspRI	CASTG	6 cut(s)	181, 886, 2017, 2086, 2221, 2275
Tth111I	GACNNNGTC	1 cut(s)	44
VpaK11BI	GGWCC	4 cut(s)	884, 1498, 1842, 2325
XagI	CCTNNNNNAGG	2 cut(s)	1002, 1602
XapI	RAATTY	6 cut(s)	17, 192, 871, 930, 1676, 1690
XbaI	TCTAGA	1 cut(s)	2252
XceI	RCATGY	3 cut(s)	650, 1297, 1888
XmaJI	CCTAGG	1 cut(s)	383
XmiI	GTMKAC	1 cut(s)	2362
XmnI	GAANNNNTTC	1 cut(s)	1678
XspI	CTAG	5 cut(s)	207, 384, 860, 2253, 2319
Zsp2I	ATGCAT	2 cut(s)	749, 1179

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.