Interferon-related developmental regulator
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G27760 AT1G27760 AT1G27760 |
| fragaria_vesca | FvH4_2g33200 FvH4_2g33200 FvH4_2g33200 |
| malus_domestica | MD08G1085400.v1.1 MD08G1085800.v1.1 MD15G1071000.v1.1 |
| prunus_persica | Prupe.1G423700_v2.0.a1 |
| pyrus_communis | pycom08g07050 pycom15g06680 |
| rosa_chinensis | RchiOBHm_Chr6g0309471 |
| rosa_laevigata | RLG00000010563 |
| rosa_multiflora | Rmu_sc0007283.1_g000001 Rmu_sc0022500.1_g000004 |
| rosa_roxburghii | Rroxscaffold_7G00159380 |
| rosa_rugosa | Rorug06G0372200 |
| rosa_samantha | Rh6AG485400 Rh6BG494700 Rh6CG499700 Rh6DG485800 |
| rosa_wichuraiana | Rw6G042280 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1115 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 94 |
| AccB1I | GGYRCC | 1 cut(s) | 112 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 681 |
| AccI | GTMKAC | 1 cut(s) | 86 |
| AciI | CCGC | 7 cut(s) | 32, 35, 94, 504, 739, 747, 1292 |
| AclWI | GGATC | 1 cut(s) | 451 |
| AcoI | YGGCCR | 1 cut(s) | 1306 |
| AcsI | RAATTY | 2 cut(s) | 269, 1017 |
| AcuI | CTGAAG | 2 cut(s) | 582, 1127 |
| AcyI | GRCGYC | 1 cut(s) | 113 |
| AfaI | GTAC | 1 cut(s) | 864 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 109, 681, 963, 1326 |
| AgsI | TTSAA | 9 cut(s) | 81, 219, 298, 404, 436, 776, 1023, 1081, 1090 |
| AjnI | CCWGG | 1 cut(s) | 159 |
| AleI | CACNNNNGTG | 1 cut(s) | 620 |
| Alw26I | GTCTC | 1 cut(s) | 900 |
| AlwI | GGATC | 1 cut(s) | 451 |
| Ama87I | CYCGRG | 1 cut(s) | 852 |
| AoxI | GGCC | 1 cut(s) | 1306 |
| ApeKI | GCWGC | 6 cut(s) | 240, 247, 602, 914, 1066, 1316 |
| ApoI | RAATTY | 2 cut(s) | 269, 1017 |
| AseI | ATTAAT | 1 cut(s) | 894 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1094, 1140 |
| AspLEI | GCGC | 1 cut(s) | 115 |
| AspS9I | GGNCC | 1 cut(s) | 1257 |
| AsuC2I | CCSGG | 1 cut(s) | 117 |
| AsuHPI | GGTGA | 3 cut(s) | 1049, 1220, 1221 |
| AvaI | CYCGRG | 1 cut(s) | 852 |
| AvaII | GGWCC | 1 cut(s) | 1257 |
| BalI | TGGCCA | 1 cut(s) | 1308 |
| BanI | GGYRCC | 1 cut(s) | 112 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 396, 428 |
| BbsI | GAAGAC | 1 cut(s) | 704 |
| BbvCI | CCTCAGC | 1 cut(s) | 918 |
| BbvI | GCAGC | 6 cut(s) | 252, 259, 589, 926, 1078, 1328 |
| BccI | CCATC | 6 cut(s) | 613, 650, 654, 818, 833, 995 |
| BceAI | ACGGC | 1 cut(s) | 590 |
| BciT130I | CCWGG | 1 cut(s) | 161 |
| BcnI | CCSGG | 1 cut(s) | 117 |
| BcoDI | GTCTC | 1 cut(s) | 900 |
| BfaI | CTAG | 1 cut(s) | 198 |
| BfmI | CTRYAG | 2 cut(s) | 651, 1046 |
| BfoI | RGCGCY | 1 cut(s) | 116 |
| BglII | AGATCT | 1 cut(s) | 949 |
| BisI | GCNGC | 9 cut(s) | 33, 36, 241, 248, 603, 747, 915, 1067, 1317 |
| BlsI | GCNGC | 9 cut(s) | 34, 37, 242, 249, 604, 748, 916, 1068, 1318 |
| Bme1390I | CCNGG | 2 cut(s) | 117, 161 |
| Bme18I | GGWCC | 1 cut(s) | 1257 |
| BmeT110I | CYCGRG | 1 cut(s) | 852 |
| BmgT120I | GGNCC | 1 cut(s) | 1257 |
| BmiI | GGNNCC | 3 cut(s) | 114, 193, 1259 |
| BmrFI | CCNGG | 2 cut(s) | 117, 161 |
| BmsI | GCATC | 5 cut(s) | 160, 295, 312, 1272, 1324 |
| BpiI | GAAGAC | 1 cut(s) | 704 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 782, 814 |
| BpmI | CTGGAG | 2 cut(s) | 494, 784 |
| Bpu10I | CCTNAGC | 1 cut(s) | 918 |
| BpuMI | CCSGG | 1 cut(s) | 117 |
| BsaBI | GATNNNNATC | 1 cut(s) | 448 |
| BsaHI | GRCGYC | 1 cut(s) | 113 |
| BsaI | GGTCTC | 1 cut(s) | 900 |
| BsaJI | CCNNGG | 3 cut(s) | 116, 675, 1099 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 109, 681, 963, 1326 |
| Bse1I | ACTGG | 3 cut(s) | 363, 801, 1309 |
| Bse8I | GATNNNNATC | 1 cut(s) | 448 |
| BseBI | CCWGG | 1 cut(s) | 161 |
| BseDI | CCNNGG | 3 cut(s) | 116, 675, 1099 |
| BseGI | GGATG | 9 cut(s) | 380, 559, 665, 730, 844, 1006, 1153, 1287, 1336 |
| BseJI | GATNNNNATC | 1 cut(s) | 448 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 109, 681, 963, 1326 |
| BseMII | CTCAG | 3 cut(s) | 825, 909, 1251 |
| BseNI | ACTGG | 3 cut(s) | 363, 801, 1309 |
| BseRI | GAGGAG | 1 cut(s) | 1119 |
| BseXI | GCAGC | 6 cut(s) | 252, 259, 589, 926, 1078, 1328 |
| BseYI | CCCAGC | 1 cut(s) | 1260 |
| BshFI | GGCC | 1 cut(s) | 1308 |
| BshNI | GGYRCC | 1 cut(s) | 112 |
| BsiHKCI | CYCGRG | 1 cut(s) | 852 |
| BsiSI | CCGG | 1 cut(s) | 116 |
| BslFI | GGGAC | 1 cut(s) | 395 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 109, 681, 963, 1326 |
| BsmAI | GTCTC | 1 cut(s) | 900 |
| BsmFI | GGGAC | 1 cut(s) | 395 |
| BsmI | GAATGC | 1 cut(s) | 34 |
| BsnI | GGCC | 1 cut(s) | 1308 |
| Bso31I | GGTCTC | 1 cut(s) | 900 |
| BsoBI | CYCGRG | 1 cut(s) | 852 |
| Bsp1407I | TGTACA | 1 cut(s) | 862 |
| Bsp143I | GATC | 3 cut(s) | 443, 727, 949 |
| BspACI | CCGC | 7 cut(s) | 32, 35, 94, 504, 739, 747, 1292 |
| BspANI | GGCC | 1 cut(s) | 1308 |
| BspCNI | CTCAG | 3 cut(s) | 826, 910, 1250 |
| BspLI | GGNNCC | 3 cut(s) | 114, 193, 1259 |
| BspPI | GGATC | 1 cut(s) | 451 |
| BspT107I | GGYRCC | 1 cut(s) | 112 |
| BspTNI | GGTCTC | 1 cut(s) | 900 |
| BsrGI | TGTACA | 1 cut(s) | 862 |
| BsrI | ACTGG | 3 cut(s) | 363, 801, 1309 |
| BssECI | CCNNGG | 3 cut(s) | 116, 675, 1099 |
| BssMI | GATC | 3 cut(s) | 443, 727, 949 |
| BssNI | GRCGYC | 1 cut(s) | 113 |
| BssT1I | CCWWGG | 2 cut(s) | 675, 1099 |
| Bst2UI | CCWGG | 1 cut(s) | 161 |
| Bst4CI | ACNGT | 3 cut(s) | 370, 652, 1077 |
| Bst6I | CTCTTC | 1 cut(s) | 179 |
| BstACI | GRCGYC | 1 cut(s) | 113 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1282 |
| BstAUI | TGTACA | 1 cut(s) | 862 |
| BstC8I | GCNNGC | 4 cut(s) | 8, 152, 245, 751 |
| BstDEI | CTNAG | 6 cut(s) | 787, 834, 918, 942, 1153, 1237 |
| BstEII | GGTNACC | 1 cut(s) | 1227 |
| BstF5I | GGATG | 9 cut(s) | 380, 559, 665, 730, 844, 1006, 1153, 1287, 1336 |
| BstH2I | RGCGCY | 1 cut(s) | 116 |
| BstHHI | GCGC | 1 cut(s) | 115 |
| BstKTI | GATC | 3 cut(s) | 446, 730, 952 |
| BstMAI | GTCTC | 1 cut(s) | 900 |
| BstMBI | GATC | 3 cut(s) | 443, 727, 949 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 170, 755, 920, 1282 |
| BstNI | CCWGG | 1 cut(s) | 161 |
| BstNSI | RCATGY | 2 cut(s) | 137, 1126 |
| BstPI | GGTNACC | 1 cut(s) | 1227 |
| BstSCI | CCNGG | 2 cut(s) | 115, 159 |
| BstSFI | CTRYAG | 2 cut(s) | 651, 1046 |
| BstV1I | GCAGC | 6 cut(s) | 252, 259, 589, 926, 1078, 1328 |
| BstV2I | GAAGAC | 1 cut(s) | 704 |
| BstX2I | RGATCY | 2 cut(s) | 443, 949 |
| BstYI | RGATCY | 2 cut(s) | 443, 949 |
| BsuRI | GGCC | 1 cut(s) | 1308 |
| BtgZI | GCGATG | 2 cut(s) | 53, 69 |
| BtsCI | GGATG | 9 cut(s) | 380, 559, 665, 730, 844, 1006, 1153, 1287, 1336 |
| BtsIMutI | CAGTG | 1 cut(s) | 296 |
| Cac8I | GCNNGC | 4 cut(s) | 8, 152, 245, 751 |
| CfoI | GCGC | 1 cut(s) | 115 |
| Cfr13I | GGNCC | 1 cut(s) | 1257 |
| Csp6I | GTAC | 1 cut(s) | 863 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 527, 562 |
| CviAII | CATG | 6 cut(s) | 134, 251, 344, 630, 1059, 1123 |
| CviQI | GTAC | 1 cut(s) | 863 |
| DdeI | CTNAG | 6 cut(s) | 787, 834, 918, 942, 1153, 1237 |
| DinI | GGCGCC | 1 cut(s) | 114 |
| DpnI | GATC | 3 cut(s) | 445, 729, 951 |
| DpnII | GATC | 3 cut(s) | 443, 727, 949 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 94 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 94 |
| EaeI | YGGCCR | 1 cut(s) | 1306 |
| Eam1104I | CTCTTC | 1 cut(s) | 179 |
| EarI | CTCTTC | 1 cut(s) | 179 |
| Eco130I | CCWWGG | 2 cut(s) | 675, 1099 |
| Eco31I | GGTCTC | 1 cut(s) | 900 |
| Eco32I | GATATC | 1 cut(s) | 982 |
| Eco47I | GGWCC | 1 cut(s) | 1257 |
| Eco57I | CTGAAG | 2 cut(s) | 582, 1127 |
| Eco88I | CYCGRG | 1 cut(s) | 852 |
| Eco91I | GGTNACC | 1 cut(s) | 1227 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1257 |
| EcoO65I | GGTNACC | 1 cut(s) | 1227 |
| EcoRII | CCWGG | 1 cut(s) | 159 |
| EcoRV | GATATC | 1 cut(s) | 982 |
| EcoT14I | CCWWGG | 2 cut(s) | 675, 1099 |
| EcoT22I | ATGCAT | 1 cut(s) | 135 |
| EgeI | GGCGCC | 1 cut(s) | 114 |
| EheI | GGCGCC | 1 cut(s) | 114 |
| ErhI | CCWWGG | 2 cut(s) | 675, 1099 |
| FaeI | CATG | 6 cut(s) | 137, 254, 347, 633, 1062, 1126 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 134, 166 |
| FaqI | GGGAC | 1 cut(s) | 395 |
| FatI | CATG | 6 cut(s) | 133, 250, 343, 629, 1058, 1122 |
| FauI | CCCGC | 1 cut(s) | 1285 |
| FblI | GTMKAC | 1 cut(s) | 86 |
| Fnu4HI | GCNGC | 9 cut(s) | 33, 36, 241, 248, 603, 747, 915, 1067, 1317 |
| FokI | GGATG | 8 cut(s) | 387, 546, 672, 737, 851, 1013, 1160, 1294 |
| Fsp4HI | GCNGC | 9 cut(s) | 33, 36, 241, 248, 603, 747, 915, 1067, 1317 |
| FspBI | CTAG | 1 cut(s) | 198 |
| GlaI | GCGC | 1 cut(s) | 114 |
| GluI | GCNGC | 9 cut(s) | 33, 36, 241, 248, 603, 747, 915, 1067, 1317 |
| GsaI | CCCAGC | 1 cut(s) | 1264 |
| GsuI | CTGGAG | 2 cut(s) | 494, 784 |
| HaeII | RGCGCY | 1 cut(s) | 116 |
| HaeIII | GGCC | 1 cut(s) | 1308 |
| HapII | CCGG | 1 cut(s) | 116 |
| HhaI | GCGC | 1 cut(s) | 115 |
| Hin1I | GRCGYC | 1 cut(s) | 113 |
| Hin1II | CATG | 6 cut(s) | 137, 254, 347, 633, 1062, 1126 |
| Hin6I | GCGC | 1 cut(s) | 113 |
| HinP1I | GCGC | 1 cut(s) | 113 |
| HincII | GTYRAC | 1 cut(s) | 87 |
| HindII | GTYRAC | 1 cut(s) | 87 |
| HindIII | AAGCTT | 1 cut(s) | 784 |
| HinfI | GANTC | 6 cut(s) | 407, 449, 689, 1040, 1177, 1184 |
| HpaII | CCGG | 1 cut(s) | 116 |
| HphI | GGTGA | 3 cut(s) | 1049, 1220, 1221 |
| Hpy166II | GTNNAC | 2 cut(s) | 87, 1161 |
| Hpy188I | TCNGA | 4 cut(s) | 100, 448, 820, 1189 |
| Hpy188III | TCNNGA | 9 cut(s) | 167, 224, 321, 441, 716, 854, 977, 1145, 1181 |
| Hpy8I | GTNNAC | 2 cut(s) | 87, 1161 |
| Hpy99I | CGWCG | 1 cut(s) | 88 |
| HpyAV | CCTTC | 2 cut(s) | 606, 1151 |
| HpyCH4III | ACNGT | 3 cut(s) | 370, 652, 1077 |
| HpyCH4IV | ACGT | 4 cut(s) | 22, 83, 494, 1323 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 170, 755, 920, 1282 |
| HpyF3I | CTNAG | 6 cut(s) | 787, 834, 918, 942, 1153, 1237 |
| HpySE526I | ACGT | 4 cut(s) | 22, 83, 494, 1323 |
| Hsp92I | GRCGYC | 1 cut(s) | 113 |
| Hsp92II | CATG | 6 cut(s) | 137, 254, 347, 633, 1062, 1126 |
| HspAI | GCGC | 1 cut(s) | 113 |
| KasI | GGCGCC | 1 cut(s) | 112 |
| Kzo9I | GATC | 3 cut(s) | 443, 727, 949 |
| Lsp1109I | GCAGC | 6 cut(s) | 252, 259, 589, 926, 1078, 1328 |
| LweI | GCATC | 5 cut(s) | 160, 295, 312, 1272, 1324 |
| MaeI | CTAG | 1 cut(s) | 198 |
| MaeII | ACGT | 4 cut(s) | 22, 83, 494, 1323 |
| MaeIII | GTNAC | 1 cut(s) | 1227 |
| MalI | GATC | 3 cut(s) | 445, 729, 951 |
| MboI | GATC | 3 cut(s) | 443, 727, 949 |
| MboII | GAAGA | 4 cut(s) | 196, 416, 632, 704 |
| MflI | RGATCY | 2 cut(s) | 443, 949 |
| MlsI | TGGCCA | 1 cut(s) | 1308 |
| MluCI | AATT | 7 cut(s) | 219, 269, 298, 420, 776, 888, 1017 |
| MluNI | TGGCCA | 1 cut(s) | 1308 |
| Mly113I | GGCGCC | 1 cut(s) | 113 |
| MlyI | GAGTC | 1 cut(s) | 698 |
| MmeI | TCCRAC | 2 cut(s) | 27, 352 |
| MnlI | CCTC | 9 cut(s) | 180, 829, 861, 913, 957, 991, 1097, 1100, 1272 |
| Mox20I | TGGCCA | 1 cut(s) | 1308 |
| Mph1103I | ATGCAT | 1 cut(s) | 135 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1094, 1140 |
| MscI | TGGCCA | 1 cut(s) | 1308 |
| MseI | TTAA | 6 cut(s) | 234, 591, 669, 767, 894, 1269 |
| MslI | CAYNNNNRTG | 2 cut(s) | 620, 1057 |
| Msp20I | TGGCCA | 1 cut(s) | 1308 |
| MspA1I | CMGCKG | 4 cut(s) | 602, 749, 917, 1292 |
| MspI | CCGG | 1 cut(s) | 116 |
| MspR9I | CCNGG | 2 cut(s) | 117, 161 |
| Mva1269I | GAATGC | 1 cut(s) | 34 |
| MvaI | CCWGG | 1 cut(s) | 161 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 170, 755, 920, 1282 |
| NarI | GGCGCC | 1 cut(s) | 113 |
| NciI | CCSGG | 1 cut(s) | 117 |
| NdeII | GATC | 3 cut(s) | 443, 727, 949 |
| NlaIII | CATG | 6 cut(s) | 137, 254, 347, 633, 1062, 1126 |
| NlaIV | GGNNCC | 3 cut(s) | 114, 193, 1259 |
| NmuCI | GTSAC | 1 cut(s) | 1227 |
| NsiI | ATGCAT | 1 cut(s) | 135 |
| NspI | RCATGY | 2 cut(s) | 137, 1126 |
| OliI | CACNNNNGTG | 1 cut(s) | 620 |
| PaeR7I | CTCGAG | 1 cut(s) | 852 |
| PctI | GAATGC | 1 cut(s) | 34 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1094, 1140 |
| PfeI | GAWTC | 5 cut(s) | 407, 449, 1040, 1177, 1184 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 681 |
| PkrI | GCNGC | 9 cut(s) | 34, 37, 242, 249, 604, 748, 916, 1068, 1318 |
| PleI | GAGTC | 1 cut(s) | 697 |
| PluTI | GGCGCC | 1 cut(s) | 116 |
| PpsI | GAGTC | 1 cut(s) | 697 |
| PpuMI | RGGWCCY | 1 cut(s) | 1257 |
| PshBI | ATTAAT | 1 cut(s) | 894 |
| PsiI | TTATAA | 1 cut(s) | 1115 |
| Psp5II | RGGWCCY | 1 cut(s) | 1257 |
| Psp6I | CCWGG | 1 cut(s) | 159 |
| PspEI | GGTNACC | 1 cut(s) | 1227 |
| PspFI | CCCAGC | 1 cut(s) | 1260 |
| PspGI | CCWGG | 1 cut(s) | 159 |
| PspN4I | GGNNCC | 3 cut(s) | 114, 193, 1259 |
| PspPI | GGNCC | 1 cut(s) | 1257 |
| PspPPI | RGGWCCY | 1 cut(s) | 1257 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 61, 93 |
| PsuI | RGATCY | 2 cut(s) | 443, 949 |
| PvuII | CAGCTG | 2 cut(s) | 602, 917 |
| RsaI | GTAC | 1 cut(s) | 864 |
| RsaNI | GTAC | 1 cut(s) | 863 |
| RseI | CAYNNNNRTG | 2 cut(s) | 620, 1057 |
| SalI | GTCGAC | 1 cut(s) | 85 |
| SaqAI | TTAA | 6 cut(s) | 234, 591, 669, 767, 894, 1269 |
| SatI | GCNGC | 9 cut(s) | 33, 36, 241, 248, 603, 747, 915, 1067, 1317 |
| Sau3AI | GATC | 3 cut(s) | 443, 727, 949 |
| Sau96I | GGNCC | 1 cut(s) | 1257 |
| SchI | GAGTC | 1 cut(s) | 698 |
| ScrFI | CCNGG | 2 cut(s) | 117, 161 |
| SfaNI | GCATC | 5 cut(s) | 160, 295, 312, 1272, 1324 |
| SfcI | CTRYAG | 2 cut(s) | 651, 1046 |
| SfoI | GGCGCC | 1 cut(s) | 114 |
| Sfr274I | CTCGAG | 1 cut(s) | 852 |
| SinI | GGWCC | 1 cut(s) | 1257 |
| SlaI | CTCGAG | 1 cut(s) | 852 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 620, 1057 |
| SmlI | CTYRAG | 1 cut(s) | 852 |
| SmoI | CTYRAG | 1 cut(s) | 852 |
| Sse9I | AATT | 7 cut(s) | 219, 269, 298, 420, 776, 888, 1017 |
| SsiI | CCGC | 7 cut(s) | 32, 35, 94, 504, 739, 747, 1292 |
| SspDI | GGCGCC | 1 cut(s) | 112 |
| SspI | AATATT | 2 cut(s) | 771, 1303 |
| SspMI | CTAG | 1 cut(s) | 198 |
| StyD4I | CCNGG | 2 cut(s) | 115, 159 |
| StyI | CCWWGG | 2 cut(s) | 675, 1099 |
| TaaI | ACNGT | 3 cut(s) | 370, 652, 1077 |
| TaiI | ACGT | 4 cut(s) | 25, 86, 497, 1326 |
| TaqI | TCGA | 5 cut(s) | 86, 138, 168, 853, 976 |
| TasI | AATT | 7 cut(s) | 219, 269, 298, 420, 776, 888, 1017 |
| TatI | WGTACW | 1 cut(s) | 862 |
| TauI | GCSGC | 3 cut(s) | 35, 38, 749 |
| TfiI | GAWTC | 5 cut(s) | 407, 449, 1040, 1177, 1184 |
| Tru1I | TTAA | 6 cut(s) | 234, 591, 669, 767, 894, 1269 |
| Tru9I | TTAA | 6 cut(s) | 234, 591, 669, 767, 894, 1269 |
| TscAI | CASTG | 1 cut(s) | 296 |
| TseFI | GTSAC | 1 cut(s) | 1227 |
| TseI | GCWGC | 6 cut(s) | 240, 247, 602, 914, 1066, 1316 |
| Tsp45I | GTSAC | 1 cut(s) | 1227 |
| TspDTI | ATGAA | 4 cut(s) | 141, 408, 548, 1149 |
| TspRI | CASTG | 1 cut(s) | 296 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 681 |
| VpaK11BI | GGWCC | 1 cut(s) | 1257 |
| VspI | ATTAAT | 1 cut(s) | 894 |
| XapI | RAATTY | 2 cut(s) | 269, 1017 |
| XceI | RCATGY | 2 cut(s) | 137, 1126 |
| XhoI | CTCGAG | 1 cut(s) | 852 |
| XmiI | GTMKAC | 1 cut(s) | 86 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1094, 1140 |
| XspI | CTAG | 1 cut(s) | 198 |
| Zsp2I | ATGCAT | 1 cut(s) | 135 |