Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0012478

Physical Location & Seq

Genomic Coordinates Reverse (-)

26394898 .. 26401815

Gene Structure 6918 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g35880.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3843 bp

ATGGAGAAGGATATTTTGACGGATGATAATCTTAATAAGAGGAGTGATCCTATTATTGCCTCCAAGTCCGTGGGGTCTTTTGTAAAGATTGATTCTATATCCATAGATCTCGATGATGCAAATGATGACAACAGTCCTGCGGGGAAGTGTGAGCATTTCTCCATACGTGGTTACGTATCTGAAATTCGGAAAAAGAACTGGAAGATATGTTGGCCATTTGCTTTAGATGGTGATTTGGACAAGTCTGATCAGGAAAAGTCAGCTATGCTTCCTCCTTTAAATGCTCCAAAATTCAGATCGTGGTGTTGCCAAAATTGTCTGCGTGAAATTGGTTCTAAAAATGTTGCAAAAAGTACAGACCTTATTCGTCATGTTGGATCTGATTCCAAGTGCACTGGTTTTCGAATGCCACCCATTACGGCTACTGCATTGCTTCAGTCAGATTGTCAACAAGGTCCAAAGTCAAAAATTGTTGAGGAAAAGCGATTTCATGCTTATACTCGTACTATTGTGGATGGCAGTGAGACACGTCCTTCCTCACGTATCGATAAGAAAAAATGGAACGGTGAAGTTTCTCCCACAACCGTCATAGCAAACGAGAACAGTTTAGCAAATTCCATGAGTCACAAAATGCCCAGATTCAGTTCTGCTGAGAGAGAAGTTAACACTAATAGGATGCAGGAGAGGCACAATCATGTCACAGAAAAACTGGATTGCAATGGATCTGTCAGAGTCTATAAGCCAGGATGTGAAAGTCATGAAGATGCCAGCCTTGAGCTTGAGATTACAAAAAACAATAGCTGGATAAGGAATTGCACTCAGAATAGTGAAACTGAGTACCACTCATTTGCAAGTGACAAACAGAAGGACTCAGTTAATGTTTCCGGACTATATAAGGCCGGGATGATTGGTGAGACTGGCAATCCTATCAAGGTTCAGACCAATGTTTGTCGTCCTCTGATTTTAGATGAGTGCGATTATGCATCATCCGAAAATCCTGAAAAGTCAAGCGGTTTTCATCGTAAGAAAAGTCGAAAGGTGCGTTTGTTGACTGAATTATTGTGTAATAAAGAGGATCCGAAGACTGATAACAGCAGGAAAGAAGATTCTCCTTCCAACAGGATCAATAATACACCTGAGGTAGAATCTATTTCCCAAGGTCAGGTGTCTCTCCAAGAAGCTGTTCGAGTGGGTTCAGGTGAGAATAAGAAAAGGAAGTTGTCAGAGGAAGAAGAGAAGGGAGGCCAAGAGACAAGCCATCCAAAAATTTTGAGTAAAAAAGTTAAGACTCTTAGGCGAGATGGACAAGCCACCAATGCAATTGCAGGTACTGGATTAGATGAAGGCGCATCGGCCAGAATTCCGTTGCAGGCTGATCTGAAGAACAATTGGGTTAGAAATGGAAATGAAAGGATCCATACTGTTGGCAAGAAGAAAGCTAAGAAATCTCATGAATTTGATGCATGGTCATCCTTAGCCCCAACTGCAGAAAAAGTGCCAGTAGAAGCCCAGGACAAATTTGAAAATTCAAGCAAGAATGCTACTAATGGTGCCTCTTTTAGGCTAATGTATGTTCCATCCACAGTTAGGGGGACTGAGTTGCACTCTTCAAAGAGAGATAGAAAATCTGGTTTTGGTAAGAGGAAAGGCAAGATGCCTCAGTCTGATGCTGGACAGGCTTCTCTATCAAATACAAGAAAAGATGCAGAAATCAAGCCAAATGGGCAAGGAACTGTTCCATTTCATCTTGTAGAAGATGCATCTACTCAGAAAGGGCTGGATCTTTCTCTCAACGGCTATTTGGCTACACAAAGATATGACAAAAATTTTCCTTATCAACAAGAAGATGGATTTCCTTCCTTGTCAACTTGGAAAGATAGCACTTGCAAACTAGATGAGTTCATGAGAAAAAATGTGGAGGTCAATTATCTGGCGAATTTAAACAAACCTTCTACATCTATGGCAAATCCATTATCTGAGGATGGAGTACATGGTGAACCAAGTAAAAAAGTTTACACCTACAGCATGCCTATTCTGAATGAGGAGCAAAATTACAGCTCCCAGGTTGAACAAGGGAGCTGTTCATTAGTGCAGCAAATGGATATATCTCGTGGAAGCAAGAATCAGAAAATCATTGACATTGAAAAAAATTCAGGCGTGCCTGTTAGTAGGAAGCATAGCAACCATCAAGCAGAGATGTCTGAGAAGGGTACTATAGATGACATACCAATGGAAATTGTTGAGCTCATGGCAAAAAATCAGTATGAGAGATGTCTTCATGAGACTCAAAATGATAAGCATGTACTAGAAATCCCGAGCACAACAAGGAATCCTCAGATGATGGAGCATACTCAAGTATATGGCATTGGGGACTGGAGAGTATTAGAGGAAACCAGTCAGAAACGAAAAGCTCAGGCAAGAAATGCAAAAAATGGCACAAGGAAAAATGTGGCATCTGTCCAACAGAAGTCCGTTGATTATTTTTCTTATATCAATGGAAACCATTTTGGTCTGAACCGTCTTGATCAAATGCATTGCACCACAGGGTTTGGTCCATTCAGTCAGTCTCAAAAGAAGCCTTCACCACGAGGCCAGTTTCCTGCTGCTGGAAACAGCAAATGTAGTTGTGCTCAAAGCTGCAAATGGGATGGAAATTTGATGGGGCATGGGTTCTCAAATTCAAACTTGCAGAGCTTTGCAGCATGCAACACATGCCATTCTGTTCCACAATCAAAGGAAGAAGCAGCTCATCTTTGGTCACCTTTAATATCATCTTTGCCCTTGGCATATAAGAATCCTCAAAAGGGTGCAGCCCAGTCATCTAATTTCAAAATGCTTTCACACTCCACTGGCGCACTGCAGAAGGGAAACACCGCTGGGGATTGTGACCTGAGTCTGAATCTGAATGCTCCCAACTTTGAGAAGCGTAATGAAGCTGTTGGTTCTGAAACTATCAGCAGAACAAAACCAGAGTACTCATTCACTTGCAAACGTAATGGGACTGAGCCTCATCAAAATTCATTGGGGTCATTAGATCTATATTCAAATGAAACCATACCAGCAATGCATTTGCTCAGCCTCATGGATGCAGGTATGCGGTCAGGTACATCCTTAAATGTGGGTGGAAACCCAAAATATCCCAAGAGATCGTCTTCTAATGATCTCAGTTCTAAGGGATATCCTGGGCTGGATATTGGTCTTTATAAGGCTACTGATACTGTGAATCATCCATCATCAAACTATTATGGGAATAATCACCTTTCTGAGAAATCTCTCAACTTGTTTCCTACCAATCCAACTTTTGGGGCATCTACATCTTCATTTGAACACTCAAAAGGTTTTGGAAGGGGTTCAGACTTTATGACTCAAGTTGCTAGCTCTCAAAGGAAAGAAAAGATACAAAGATCCCATTCGCCTGCACAAAATAGAGGTCCTAGATCAGACAAATCGTTAGCTACTGATGGTGGTTTCGGCAACAATTGTACAACTATCCCTGTTCATACTATCCCAAAAGGATTCCTTCCTGTTTCTGGTCCTATGATGTTTCCACTGCAGTACCACTCCATTGCAAATTCAAGGAAACACAACTTGGAAACTCCTAATGCTAATGGAACCATGAAGCCTCCAAAGACTAGTTTGGAGTCTTCAATCTGCTGTGTTAACAGAAATCCAGCTGATTTCAGCATGCCAGATGTTGGAAATGGGTACATGATTAGAGGTGAAGATCTAAAAGTTGGGAAGAAAGTTTCTTCTGAAAAGAGGCATGGCTTATATAAAGTGGATCAGCAGAAGCGGCAGAGGAATACAAATCACATTTTTGAAAAGCAACACGCTCGACGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003697 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006355 GO:0006464 GO:0006479 GO:0006807 GO:0006950 GO:0006970 GO:0006972 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008213 GO:0009628 GO:0009651 GO:0009791 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009909 GO:0009910 GO:0009987 GO:0010022 GO:0010073 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0018022 GO:0018193 GO:0018205 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032259 GO:0032501 GO:0032502 GO:0034968 GO:0036211 GO:0042538 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045892 GO:0045934 GO:0048367 GO:0048507 GO:0048519 GO:0048523 GO:0048580 GO:0048581 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051172 GO:0051239 GO:0051241 GO:0051252 GO:0051253 GO:0051276 GO:0060255 GO:0065007 GO:0070734 GO:0071704 GO:0071840 GO:0080090 GO:0097159 GO:1901363 GO:1901564 GO:1902679 GO:1903506 GO:1903507 GO:2000026 GO:2000112 GO:2000113 GO:2000241 GO:2000242 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

1281

Amino Acids

142.03

Weight (kDa)

9.08

Isoelectric Point (pI)

43.44

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012478)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G11530 AT5G11530 AT5G11530
fragaria_vesca	FvH4_2g35880 FvH4_2g35880
malus_domestica	MD08G1116300.v1.1 MD15G1096000.v1.1
prunus_persica	Prupe.1G450900_v2.0.a1
pyrus_communis	pycom08g09700
rosa_chinensis	RchiOBHm_Chr6g0305941
rosa_laevigata	RLG00000010844
rosa_multiflora	Rmu_sc0001809.1_g000052
rosa_roxburghii	Rroxscaffold_7G00162200
rosa_rugosa	Rorug06G0345500
rosa_samantha	Rh6AG457200 Rh6BG443900 Rh6CG471200 Rh6DG457700
rosa_wichuraiana	Rw6G039890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	3204
Acc36I	ACCTGC	2 cut(s)	1316, 3080
AccB1I	GGYRCC	1 cut(s)	1550
AccB7I	CCANNNNNTGG	2 cut(s)	3302, 3695
AccIII	TCCGGA	1 cut(s)	884
AciI	CCGC	5 cut(s)	140, 1011, 2874, 3097, 3793
AcoI	YGGCCR	2 cut(s)	212, 1353
AcuI	CTGAAG	2 cut(s)	419, 1400
AfiI	CCNNNNNNNGG	8 cut(s)	1162, 1560, 1587, 2606, 2804, 3302, 3530, 3695
AflIII	ACRYGT	1 cut(s)	527
AhlI	ACTAGT	1 cut(s)	3632
AjiI	CACGTC	1 cut(s)	530
AjnI	CCWGG	4 cut(s)	742, 1509, 2061, 3181
AjuI	GAANNNNNNNTTGG	4 cut(s)	1167, 1199, 3572, 3604
Alw21I	GWGCWC	4 cut(s)	395, 2247, 2321, 2632
Alw26I	GTCTC	6 cut(s)	518, 908, 1173, 1244, 2276, 2571
Alw44I	GTGCAC	1 cut(s)	391
AlwNI	CAGNNNCTG	1 cut(s)	1331
Ama87I	CYCGRG	1 cut(s)	2314
Aor13HI	TCCGGA	1 cut(s)	884
AoxI	GGCC	5 cut(s)	212, 897, 1243, 1353, 2590
ApaLI	GTGCAC	1 cut(s)	391
ApeKI	GCWGC	6 cut(s)	2092, 2603, 2637, 2699, 2744, 2810
ArsI	GACNNNNNNTTYG	2 cut(s)	3415, 3447
Asp700I	GAANNNNTTC	2 cut(s)	1182, 3349
AspLEI	GCGC	2 cut(s)	1349, 2855
AspS9I	GGNCC	4 cut(s)	455, 2552, 3431, 3533
AsuC2I	CCSGG	1 cut(s)	901
AsuHPI	GGTGA	9 cut(s)	242, 578, 923, 1211, 2006, 2574, 2751, 3248, 3731
AsuII	TTCGAA	1 cut(s)	403
AsuNHI	GCTAGC	1 cut(s)	3374
AvaI	CYCGRG	1 cut(s)	2314
AvaII	GGWCC	4 cut(s)	455, 2552, 3431, 3533
AxyI	CCTNAGG	1 cut(s)	1137
BaeGI	GKGCMC	1 cut(s)	395
BaeI	ACNNNNGTAYC	2 cut(s)	3539, 3572
BalI	TGGCCA	1 cut(s)	214
BamHI	GGATCC	2 cut(s)	1075, 1413
BanI	GGYRCC	1 cut(s)	1550
BanII	GRGCYC	1 cut(s)	2247
BauI	CACGAG	2 cut(s)	2109, 2586
BbsI	GAAGAC	4 cut(s)	1088, 2267, 3144, 3636
Bbv12I	GWGCWC	4 cut(s)	395, 2247, 2321, 2632
BbvI	GCAGC	6 cut(s)	2104, 2590, 2624, 2711, 2756, 2822
BceAI	ACGGC	2 cut(s)	435, 1810
BcgI	CGANNNNNNTGC	1 cut(s)	3815
BciT130I	CCWGG	4 cut(s)	744, 1511, 2063, 3183
BclI	TGATCA	2 cut(s)	247, 2524
BcnI	CCSGG	1 cut(s)	901
BcoDI	GTCTC	6 cut(s)	518, 908, 1173, 1244, 2276, 2571
BcuI	ACTAGT	1 cut(s)	3632
BfaI	CTAG	5 cut(s)	1892, 2306, 3375, 3435, 3633
BfmI	CTRYAG	5 cut(s)	1485, 2020, 2214, 2858, 3551
BfuAI	ACCTGC	2 cut(s)	1316, 3080
BglI	GCCNNNNNGGC	1 cut(s)	1723
BglII	AGATCT	3 cut(s)	106, 3034, 3724
BisI	GCNGC	7 cut(s)	2093, 2604, 2638, 2700, 2745, 2811, 3794
BlpI	GCTNAGC	1 cut(s)	3074
BlsI	GCNGC	7 cut(s)	2094, 2605, 2639, 2701, 2746, 2812, 3795
BmcAI	AGTACT	1 cut(s)	2975
Bme1390I	CCNGG	5 cut(s)	744, 901, 1511, 2063, 3183
Bme18I	GGWCC	4 cut(s)	455, 2552, 3431, 3533
BmeT110I	CYCGRG	1 cut(s)	2314
BmgBI	CACGTC	1 cut(s)	530
BmgT120I	GGNCC	4 cut(s)	455, 2552, 3431, 3533
BmiI	GGNNCC	4 cut(s)	1077, 1415, 1552, 3613
BmrFI	CCNGG	5 cut(s)	744, 901, 1511, 2063, 3183
BmrI	ACTGGG	1 cut(s)	2809
BmtI	GCTAGC	1 cut(s)	3378
BmuI	ACTGGG	1 cut(s)	2809
BoxI	GACNNNNGTC	2 cut(s)	132, 2892
BpiI	GAAGAC	4 cut(s)	1088, 2267, 3144, 3636
BplI	GAGNNNNNCTC	6 cut(s)	143, 175, 827, 859, 1589, 1621
BpmI	CTGGAG	1 cut(s)	2395
Bpu10I	CCTNAGC	2 cut(s)	1474, 2412
Bpu1102I	GCTNAGC	1 cut(s)	3074
Bpu14I	TTCGAA	1 cut(s)	403
BpuEI	CTTGAG	4 cut(s)	794, 800, 2337, 3351
BpuMI	CCSGG	1 cut(s)	901
Bsa29I	ATCGAT	1 cut(s)	546
BsaAI	YACGTR	3 cut(s)	167, 175, 542
BsaBI	GATNNNNATC	1 cut(s)	27
BsaJI	CCNNGG	6 cut(s)	69, 1156, 1509, 2061, 2781, 3182
BsaWI	WCCGGW	1 cut(s)	884
Bsc4I	CCNNNNNNNGG	8 cut(s)	1162, 1560, 1587, 2606, 2804, 3302, 3530, 3695
Bse21I	CCTNAGG	1 cut(s)	1137
Bse3DI	GCAATG	5 cut(s)	428, 724, 2533, 3069, 3564
Bse8I	GATNNNNATC	1 cut(s)	27
BseAI	TCCGGA	1 cut(s)	884
BseBI	CCWGG	4 cut(s)	744, 1511, 2063, 3183
BseCI	ATCGAT	1 cut(s)	546
BseDI	CCNNGG	6 cut(s)	69, 1156, 1509, 2061, 2781, 3182
BseJI	GATNNNNATC	1 cut(s)	27
BseLI	CCNNNNNNNGG	8 cut(s)	1162, 1560, 1587, 2606, 2804, 3302, 3530, 3695
BseMI	GCAATG	5 cut(s)	428, 724, 2533, 3069, 3564
BseRI	GAGGAG	2 cut(s)	55, 2057
BseSI	GKGCMC	1 cut(s)	395
BseXI	GCAGC	6 cut(s)	2104, 2590, 2624, 2711, 2756, 2822
BseYI	CCCAGC	1 cut(s)	2876
BsgI	GTGCAG	3 cut(s)	2111, 2829, 3402
BshFI	GGCC	5 cut(s)	214, 899, 1245, 1355, 2592
BshNI	GGYRCC	1 cut(s)	1550
BshVI	ATCGAT	1 cut(s)	546
BsiHKAI	GWGCWC	4 cut(s)	395, 2247, 2321, 2632
BsiHKCI	CYCGRG	1 cut(s)	2314
BsiSI	CCGG	2 cut(s)	885, 900
BslFI	GGGAC	3 cut(s)	1606, 2384, 3013
BslI	CCNNNNNNNGG	8 cut(s)	1162, 1560, 1587, 2606, 2804, 3302, 3530, 3695
BsmAI	GTCTC	6 cut(s)	518, 908, 1173, 1244, 2276, 2571
BsmFI	GGGAC	3 cut(s)	1606, 2384, 3013
BsmI	GAATGC	3 cut(s)	411, 1543, 2911
BsnI	GGCC	5 cut(s)	214, 899, 1245, 1355, 2592
BsoBI	CYCGRG	1 cut(s)	2314
Bsp119I	TTCGAA	1 cut(s)	403
Bsp1286I	GDGCHC	4 cut(s)	395, 2247, 2321, 2632
Bsp13I	TCCGGA	1 cut(s)	884
Bsp1407I	TGTACA	1 cut(s)	3482
Bsp1720I	GCTNAGC	1 cut(s)	3074
BspACI	CCGC	5 cut(s)	140, 1011, 2874, 3097, 3793
BspANI	GGCC	5 cut(s)	214, 899, 1245, 1355, 2592
BspDI	ATCGAT	1 cut(s)	546
BspEI	TCCGGA	1 cut(s)	884
BspHI	TCATGA	4 cut(s)	757, 1450, 1902, 2278
BspLI	GGNNCC	4 cut(s)	1077, 1415, 1552, 3613
BspMAI	CTGCAG	3 cut(s)	1489, 2862, 3555
BspMI	ACCTGC	2 cut(s)	1316, 3080
BspOI	GCTAGC	1 cut(s)	3378
BspT104I	TTCGAA	1 cut(s)	403
BspT107I	GGYRCC	1 cut(s)	1550
BsrDI	GCAATG	5 cut(s)	428, 724, 2533, 3069, 3564
BsrGI	TGTACA	1 cut(s)	3482
BssECI	CCNNGG	6 cut(s)	69, 1156, 1509, 2061, 2781, 3182
BssSI	CACGAG	2 cut(s)	2109, 2586
BssT1I	CCWWGG	2 cut(s)	1156, 2781
Bst2BI	CACGAG	2 cut(s)	2109, 2586
Bst2UI	CCWGG	4 cut(s)	744, 1511, 2063, 3183
Bst4CI	ACNGT	9 cut(s)	134, 566, 586, 605, 1423, 1585, 1735, 2519, 3220
Bst6I	CTCTTC	2 cut(s)	1227, 1612
BstAPI	GCANNNNNTGC	2 cut(s)	2423, 2712
BstAUI	TGTACA	1 cut(s)	3482
BstBAI	YACGTR	3 cut(s)	167, 175, 542
BstBI	TTCGAA	1 cut(s)	403
BstC8I	GCNNGC	8 cut(s)	769, 1371, 2027, 2159, 2704, 3376, 3417, 3686
BstDSI	CCRYGG	1 cut(s)	69
BstEII	GGTNACC	1 cut(s)	2757
BstENI	CCTNNNNNAGG	1 cut(s)	1558
BstHHI	GCGC	2 cut(s)	1349, 2855
BstMAI	GTCTC	6 cut(s)	518, 908, 1173, 1244, 2276, 2571
BstMWI	GCNNNNNNNGC	8 cut(s)	685, 1316, 1484, 1676, 1723, 2423, 2712, 3793
BstNI	CCWGG	4 cut(s)	744, 1511, 2063, 3183
BstNSI	RCATGY	5 cut(s)	2029, 2303, 2706, 2715, 3688
BstPAI	GACNNNNGTC	2 cut(s)	132, 2892
BstPI	GGTNACC	1 cut(s)	2757
BstSCI	CCNGG	5 cut(s)	742, 899, 1509, 2061, 3181
BstSFI	CTRYAG	5 cut(s)	1485, 2020, 2214, 2858, 3551
BstSLI	GKGCMC	1 cut(s)	395
BstSNI	TACGTA	1 cut(s)	175
BstV1I	GCAGC	6 cut(s)	2104, 2590, 2624, 2711, 2756, 2822
BstV2I	GAAGAC	4 cut(s)	1088, 2267, 3144, 3636
BstX2I	RGATCY	9 cut(s)	106, 377, 722, 1075, 1413, 1780, 3034, 3404, 3724
BstXI	CCANNNNNNTGG	2 cut(s)	70, 1424
BstYI	RGATCY	9 cut(s)	106, 377, 722, 1075, 1413, 1780, 3034, 3404, 3724
Bsu15I	ATCGAT	1 cut(s)	546
Bsu36I	CCTNAGG	1 cut(s)	1137
BsuRI	GGCC	5 cut(s)	214, 899, 1245, 1355, 2592
BsuTUI	ATCGAT	1 cut(s)	546
BtgI	CCRYGG	1 cut(s)	69
BtrI	CACGTC	1 cut(s)	530
BtsI	GCAGTG	3 cut(s)	526, 2855, 3548
BtsIMutI	CAGTG	5 cut(s)	393, 526, 2847, 2855, 3548
BveI	ACCTGC	2 cut(s)	1316, 3080
Cac8I	GCNNGC	8 cut(s)	769, 1371, 2027, 2159, 2704, 3376, 3417, 3686
CaiI	CAGNNNCTG	1 cut(s)	1331
CciI	TCATGA	4 cut(s)	757, 1450, 1902, 2278
CfoI	GCGC	2 cut(s)	1349, 2855
Cfr13I	GGNCC	4 cut(s)	455, 2552, 3431, 3533
ClaI	ATCGAT	1 cut(s)	546
CspCI	CAANNNNNGTGG	2 cut(s)	2530, 2565
DraI	TTTAAA	2 cut(s)	279, 1941
EaeI	YGGCCR	2 cut(s)	212, 1353
Eam1104I	CTCTTC	2 cut(s)	1227, 1612
EarI	CTCTTC	2 cut(s)	1227, 1612
Ecl136II	GAGCTC	1 cut(s)	2245
Eco105I	TACGTA	1 cut(s)	175
Eco130I	CCWWGG	2 cut(s)	1156, 2781
Eco24I	GRGCYC	1 cut(s)	2247
Eco32I	GATATC	1 cut(s)	3179
Eco47I	GGWCC	4 cut(s)	455, 2552, 3431, 3533
Eco53kI	GAGCTC	1 cut(s)	2245
Eco57I	CTGAAG	2 cut(s)	419, 1400
Eco81I	CCTNAGG	1 cut(s)	1137
Eco88I	CYCGRG	1 cut(s)	2314
Eco91I	GGTNACC	1 cut(s)	2757
EcoICRI	GAGCTC	1 cut(s)	2245
EcoNI	CCTNNNNNAGG	1 cut(s)	1558
EcoO109I	RGGNCCY	1 cut(s)	3431
EcoO65I	GGTNACC	1 cut(s)	2757
EcoRI	GAATTC	1 cut(s)	1359
EcoRII	CCWGG	4 cut(s)	742, 1509, 2061, 3181
EcoRV	GATATC	1 cut(s)	3179
EcoT14I	CCWWGG	2 cut(s)	1156, 2781
EcoT22I	ATGCAT	5 cut(s)	985, 1465, 1762, 2535, 3069
EcoT38I	GRGCYC	1 cut(s)	2247
ErhI	CCWWGG	2 cut(s)	1156, 2781
FalI	AAGNNNNNCTT	2 cut(s)	3504, 3536
FaqI	GGGAC	3 cut(s)	1606, 2384, 3013
FauI	CCCGC	1 cut(s)	133
FbaI	TGATCA	2 cut(s)	247, 2524
Fnu4HI	GCNGC	7 cut(s)	2093, 2604, 2638, 2700, 2745, 2811, 3794
FriOI	GRGCYC	1 cut(s)	2247
Fsp4HI	GCNGC	7 cut(s)	2093, 2604, 2638, 2700, 2745, 2811, 3794
FspBI	CTAG	5 cut(s)	1892, 2306, 3375, 3435, 3633
GlaI	GCGC	2 cut(s)	1348, 2854
GluI	GCNGC	7 cut(s)	2093, 2604, 2638, 2700, 2745, 2811, 3794
GsaI	CCCAGC	1 cut(s)	2880
GsuI	CTGGAG	1 cut(s)	2395
HaeIII	GGCC	5 cut(s)	214, 899, 1245, 1355, 2592
HapII	CCGG	2 cut(s)	885, 900
HhaI	GCGC	2 cut(s)	1349, 2855
Hin6I	GCGC	2 cut(s)	1347, 2853
HinP1I	GCGC	2 cut(s)	1347, 2853
HincII	GTYRAC	5 cut(s)	449, 664, 1050, 1866, 3661
HindII	GTYRAC	5 cut(s)	449, 664, 1050, 1866, 3661
HpaI	GTTAAC	2 cut(s)	664, 3661
HpaII	CCGG	2 cut(s)	885, 900
HphI	GGTGA	9 cut(s)	242, 578, 923, 1211, 2006, 2574, 2751, 3248, 3731
Hpy166II	GTNNAC	8 cut(s)	393, 449, 664, 1050, 1866, 1997, 2014, 3661
Hpy8I	GTNNAC	8 cut(s)	393, 449, 664, 1050, 1866, 1997, 2014, 3661
Hpy99I	CGWCG	1 cut(s)	3840
HpyCH4III	ACNGT	9 cut(s)	134, 566, 586, 605, 1423, 1585, 1735, 2519, 3220
HpyCH4IV	ACGT	6 cut(s)	166, 174, 529, 541, 2992, 3838
HpyF10VI	GCNNNNNNNGC	8 cut(s)	685, 1316, 1484, 1676, 1723, 2423, 2712, 3793
HpySE526I	ACGT	6 cut(s)	166, 174, 529, 541, 2992, 3838
HspAI	GCGC	2 cut(s)	1347, 2853
Kpn2I	TCCGGA	1 cut(s)	884
Ksp22I	TGATCA	2 cut(s)	247, 2524
KspAI	GTTAAC	2 cut(s)	664, 3661
LmnI	GCTCC	6 cut(s)	289, 2044, 2063, 2076, 2344, 2914
Lsp1109I	GCAGC	6 cut(s)	2104, 2590, 2624, 2711, 2756, 2822
MaeI	CTAG	5 cut(s)	1892, 2306, 3375, 3435, 3633
MaeII	ACGT	6 cut(s)	166, 174, 529, 541, 2992, 3838
MaeIII	GTNAC	6 cut(s)	170, 623, 697, 854, 2757, 2885
MfeI	CAATTG	3 cut(s)	1320, 1387, 3478
MflI	RGATCY	9 cut(s)	106, 377, 722, 1075, 1413, 1780, 3034, 3404, 3724
MhlI	GDGCHC	4 cut(s)	395, 2247, 2321, 2632
MlsI	TGGCCA	1 cut(s)	214
MluNI	TGGCCA	1 cut(s)	214
MlyI	GAGTC	8 cut(s)	631, 741, 863, 1282, 2278, 2902, 3358, 3650
MmeI	TCCRAC	5 cut(s)	355, 1140, 2485, 3320, 3676
Mox20I	TGGCCA	1 cut(s)	214
Mph1103I	ATGCAT	5 cut(s)	985, 1465, 1762, 2535, 3069
MroI	TCCGGA	1 cut(s)	884
MroXI	GAANNNNTTC	2 cut(s)	1182, 3349
MscI	TGGCCA	1 cut(s)	214
MseI	TTAA	9 cut(s)	33, 278, 663, 876, 1284, 1940, 2765, 3113, 3660
MslI	CAYNNNNRTG	3 cut(s)	693, 762, 2228
Msp20I	TGGCCA	1 cut(s)	214
MspA1I	CMGCKG	2 cut(s)	2876, 3674
MspI	CCGG	2 cut(s)	885, 900
MspR9I	CCNGG	5 cut(s)	744, 901, 1511, 2063, 3183
MunI	CAATTG	3 cut(s)	1320, 1387, 3478
Mva1269I	GAATGC	3 cut(s)	411, 1543, 2911
MvaI	CCWGG	4 cut(s)	744, 1511, 2063, 3183
MwoI	GCNNNNNNNGC	8 cut(s)	685, 1316, 1484, 1676, 1723, 2423, 2712, 3793
NciI	CCSGG	1 cut(s)	901
NheI	GCTAGC	1 cut(s)	3374
NlaIV	GGNNCC	4 cut(s)	1077, 1415, 1552, 3613
NmuCI	GTSAC	5 cut(s)	623, 697, 854, 2757, 2885
NsiI	ATGCAT	5 cut(s)	985, 1465, 1762, 2535, 3069
NspI	RCATGY	5 cut(s)	2029, 2303, 2706, 2715, 3688
NspV	TTCGAA	1 cut(s)	403
PaeI	GCATGC	3 cut(s)	2029, 2706, 3688
PagI	TCATGA	4 cut(s)	757, 1450, 1902, 2278
PcsI	WCGNNNNNNNCGW	1 cut(s)	1039
PctI	GAATGC	3 cut(s)	411, 1543, 2911
PdmI	GAANNNNTTC	2 cut(s)	1182, 3349
PflMI	CCANNNNNTGG	2 cut(s)	3302, 3695
PkrI	GCNGC	7 cut(s)	2094, 2605, 2639, 2701, 2746, 2812, 3795
PleI	GAGTC	8 cut(s)	630, 740, 863, 1282, 2278, 2901, 3358, 3649
PpsI	GAGTC	8 cut(s)	630, 740, 863, 1282, 2278, 2901, 3358, 3649
Ppu21I	YACGTR	3 cut(s)	167, 175, 542
PpuMI	RGGWCCY	1 cut(s)	3431
PshAI	GACNNNNGTC	2 cut(s)	132, 2892
PsiI	TTATAA	1 cut(s)	3204
Psp124BI	GAGCTC	1 cut(s)	2247
Psp5II	RGGWCCY	1 cut(s)	3431
Psp6I	CCWGG	4 cut(s)	742, 1509, 2061, 3181
PspEI	GGTNACC	1 cut(s)	2757
PspFI	CCCAGC	1 cut(s)	2876
PspGI	CCWGG	4 cut(s)	742, 1509, 2061, 3181
PspN4I	GGNNCC	4 cut(s)	1077, 1415, 1552, 3613
PspPI	GGNCC	4 cut(s)	455, 2552, 3431, 3533
PspPPI	RGGWCCY	1 cut(s)	3431
PstI	CTGCAG	3 cut(s)	1489, 2862, 3555
PstNI	CAGNNNCTG	1 cut(s)	1331
PsuI	RGATCY	9 cut(s)	106, 377, 722, 1075, 1413, 1780, 3034, 3404, 3724
PvuII	CAGCTG	1 cut(s)	3674
RseI	CAYNNNNRTG	3 cut(s)	693, 762, 2228
SacI	GAGCTC	1 cut(s)	2247
SaqAI	TTAA	9 cut(s)	33, 278, 663, 876, 1284, 1940, 2765, 3113, 3660
SatI	GCNGC	7 cut(s)	2093, 2604, 2638, 2700, 2745, 2811, 3794
Sau96I	GGNCC	4 cut(s)	455, 2552, 3431, 3533
ScaI	AGTACT	1 cut(s)	2975
SchI	GAGTC	8 cut(s)	631, 741, 863, 1282, 2278, 2902, 3358, 3650
ScrFI	CCNGG	5 cut(s)	744, 901, 1511, 2063, 3183
SduI	GDGCHC	4 cut(s)	395, 2247, 2321, 2632
SfcI	CTRYAG	5 cut(s)	1485, 2020, 2214, 2858, 3551
SfuI	TTCGAA	1 cut(s)	403
SinI	GGWCC	4 cut(s)	455, 2552, 3431, 3533
SmiMI	CAYNNNNRTG	3 cut(s)	693, 762, 2228
SmlI	CTYRAG	4 cut(s)	773, 779, 2352, 3366
SmoI	CTYRAG	4 cut(s)	773, 779, 2352, 3366
SnaBI	TACGTA	1 cut(s)	175
SpeI	ACTAGT	1 cut(s)	3632
SphI	GCATGC	3 cut(s)	2029, 2706, 3688
SsiI	CCGC	5 cut(s)	140, 1011, 2874, 3097, 3793
SspMI	CTAG	5 cut(s)	1892, 2306, 3375, 3435, 3633
SstI	GAGCTC	1 cut(s)	2247
StyD4I	CCNGG	5 cut(s)	742, 899, 1509, 2061, 3181
StyI	CCWWGG	2 cut(s)	1156, 2781
TaaI	ACNGT	9 cut(s)	134, 566, 586, 605, 1423, 1585, 1735, 2519, 3220
TaiI	ACGT	6 cut(s)	169, 177, 532, 544, 2995, 3841
TaqI	TCGA	6 cut(s)	111, 403, 546, 1033, 1186, 3835
TatI	WGTACW	5 cut(s)	353, 1987, 2302, 2973, 3482
TauI	GCSGC	1 cut(s)	3796
Tru1I	TTAA	9 cut(s)	33, 278, 663, 876, 1284, 1940, 2765, 3113, 3660
Tru9I	TTAA	9 cut(s)	33, 278, 663, 876, 1284, 1940, 2765, 3113, 3660
TscAI	CASTG	5 cut(s)	400, 526, 2854, 2862, 3555
TseFI	GTSAC	5 cut(s)	623, 697, 854, 2757, 2885
TseI	GCWGC	6 cut(s)	2092, 2603, 2637, 2699, 2744, 2810
Tsp45I	GTSAC	5 cut(s)	623, 697, 854, 2757, 2885
TspGWI	ACGGA	4 cut(s)	35, 58, 1353, 2461
TspRI	CASTG	5 cut(s)	400, 526, 2854, 2862, 3555
Van91I	CCANNNNNTGG	2 cut(s)	3302, 3695
VneI	GTGCAC	1 cut(s)	391
VpaK11BI	GGWCC	4 cut(s)	455, 2552, 3431, 3533
XagI	CCTNNNNNAGG	1 cut(s)	1558
XceI	RCATGY	5 cut(s)	2029, 2303, 2706, 2715, 3688
XmnI	GAANNNNTTC	2 cut(s)	1182, 3349
XspI	CTAG	5 cut(s)	1892, 2306, 3375, 3435, 3633
ZrmI	AGTACT	1 cut(s)	2975
Zsp2I	ATGCAT	5 cut(s)	985, 1465, 1762, 2535, 3069

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.