Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0012478

Physical Location & Seq

Genomic Coordinates Reverse (-)

37975397 .. 37982988

Gene Structure 7592 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G450900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3852 bp

ATGGAGAGAGGTCTTCTAATGGCTGATAATCATAAGAGGAGTGACCCTATTATTGCCTCCAAGTCCAAGTCGGTGGGGTCTTTTGTTAAAATTGACTCAATATCTATAGATCTTGCTGATGCAAATGTCAAGAGTAGTAGTAGTCATGCGGCAAAGTGTGAGCACTTCTCCATACGTGGTTATGTATCTGAAATTCGCAAAAAGAACTGGAAGGTATGTTGGCCATTTGATTCAGATGGTGATTTGAACAAGTTTGATCAGCTGGAGGATACATCCGTGCTTCCTCCTTTGAAGACTCCAAATTTCAGATTCTGGTCTTGCCAGAATTGCGTGCAGGAAACTGGTTCTAAGATCATTCCAGAAGATCATGGTACAGGCATTTATTGTTGCGATATTGGATCTGATTCCAATAAGACTTGTGCTCAGGTGTGCAGTAGTGCTTCGGTACTTTTGTCAGATTGTCAGCAAGGTCCACAGTCAAAAGTTGTTGAGGGAAAAAGAGTTGAAGCTCCTACTTCTACTGTTGGGTGTGGCAACGAGCAACATCCTTCATCATGTTCTACTGCTAAGAAAGAAGGGAAGGATGAAGTTCCACCCACTACCATCATAGCAAATGGGAATGCCTTAGAAGATTCTGTGAGTCACGAAATGCCTAGACTAAATTCTGTTGAGACAGAAGTTAACCCAAAAAGGACACAGGAGAGACATAAAGATGACACAGAAGCTGTAAGATTGGAGGGCAATGGATCTGTCGAAGCCTGTAAACCAGGATGTGAAAGTCATGAAGATACCAATGTTGAGCTTGATATCACAAACAAAAATTTCTGGAACAAGAATCACATCCAGTCTAGTGAAGCTAAGTATCAAACTTCTACAGAAGACAATCACAAGGAGTCAATGAATGCTTTTGGCACATTTAAGAGAGCCGGGATGGTTGACAAGGCAGATAATGCTACCAAGCTTCAGACCGACGCTTGTCATCCTCTAGTATTAGATGAATGTGATTATGCATCATCTGAGAATTTTGATAAGTCAAGTGGTTTGAGTCGTAAGAAAAATCGGAAGGTACGTCTGCTGAGTGAGTTGGTGAATAAAGGGGATGCAAAGACTGATTGCATCAGGATAGAAGATTCTCCATCCAACACACTTAGTAATATATCTGGAGCAGGAATTGTTTCCCAAAGCCAGGTGTCTGTCCAAGAAAATGCTAGAGTGGGTTTCAGTGATAATAAGAGAAGGAAGTTTCCAGAGGAGGAGGAACAGGGATGCCTAGAGATGAGCCATCCTAAAAGTTTGAATAAAAAACTTAAGACTTTCAGGCGAGATGAGGAAACCACCAATGCCATTGCAGAATCTGTATTAGAAGAAGATGCAGTTGCCAGAACATCTTTGCAGGCTGATGAGAAGAGCAACTGGAATAGACACGAAAATGAAAGAATCCCTGCTGTTGGTAAGAAGAAAATTAAGAAATGCAATGATTTCGGCACATGTTCGTCCTTAGTCCCACCTGAAGATAATGTGCCAATAGAAGCTGTGGACAAAGTTGGAAATTCAAGCAAGGGTAATGCTACTAAAAGTGTTTCTTTTACTCTAATGTATGATGCATCCACAGGTAGGGGGATCGATCAAATTCCTTTTCCTGCTTCGGAAGCAGAGGGAAAATCTGGTATCTGTAAGAGGAAAGGCAAGATGCCTAAAGTTGATAATGGGCAGGCTTCTCTATTTCCTTGGAATGGCATGTTCAGGAAAAGTCCAAAGACAAGGGAAGATGTAGAAATCATGCAAACTGGGCATCCATTTCATCTGGCAGAAGATGCATCCGCTGAAAAAGGGCTGGATCTTTCTCTTAACAGCTATTTGGCTGCAGAAAGATGTGGCAAGAAATCTATTCCCCAATCTGAAGATGGATTTCCTTCCTTGTCCACTTGGAAAGATGGCAGCTGCAAATTAGATGTGTTTATGAGGAAAAATGTGGAAGCTAACTATGCTGCAAATCTGAAACCTTCTAAATCAATTTCAAATGCATTTTCTGGGAAAGGAGGACATGGTGAATTTAGTAGTAAATTTTACACTTATACCATGCCTATCCTGAATGAGGAGAAAAACTATACCTCCCAGATTGAACAAGGGAGTTGTTCTTTGCAGCAAATGGATATTTCCCGTTCAAGAAACAAGGAGAAAATTGTTGGGGTTCAGAAAAGTTCAGCTGTGCCTGTTAATAGGAAACATAGCAACCATAAATCTGACAAGATGTCTCAGCAGGCAGCTGTGGATGACATACCGATGGAAATCGTTGAACTCATGGCGAAAAATCAGTATGAGAGATGTCTTCATGATGCTGAACATAATAAGAATATTTTTGAAAACACCAATAAAGCAAGGAAAGCTCAGGTGATGGATCATAGTTATGGGATTGGGGACTTAAGAATATCAGAAGAAACCAGTCAGAAACGAAAGCCTCAGGCAAGAAATGCAAAAAATGGCATAACCACAAGGAAAAATGCAGGACCTGCCAAACAGAAGTCAGTTGATTATTCTACTTATATGAATGGAAAAGATTTTGGTGTGAGCCGGCTTGATCAAATGCATTGCCCTACAGGGTTTAGTGCACTCAGCCAGGCACAAAAGAAGTCAACTCGAGACCAATTTCCTGCAGCTGGTTACAGCAGCTGTAGTTGTGCTCAAAATTGCAAATGGAATGGGGATATGATGGGCCCTGGGTTCTCACATTCTAGCTTGCGGACGTTAGCAACATCTAACACATGCCAGTCTATTCCACACCCAAAGGAAGAAGCAGCTCGTCTTTGGTCATCTGGAATGCCAGTTCACTTGCCCTTAACGTACAGCAATCCTCAAAAGTGTCCAACTCAGCCTTCTAATGTCGATATGCTTTTACGTCCTCCTGGCTCACTGCATAAGGGAAACGTAAATGGGGATTATGACCTGAATTTGTTTAATCTAAAATCTACCAACCGGGAAAAGCATACTGAAGAAGTTGGTTCTGGGAGCTTCAGCAGATCAAATGCAGAGTATTCATTCTCTTGCAAACGACATGGGTCTGAGCCTCATCAAAATGCAATGGGGTCATTTGATCTATATTCTAATGAAACTATACCAGCAATGCATTTGCTCAGCCTCATGGATGCAGGTATGCGGTCAGGTGCGCACTTCAACATGGGTGGAAACCCGAAATTTCTCAAGAGACCCTTTCCTAATGATCTTTACTCTAAGGAGTATTCTGCACCGGACATTGGTGGTTATAAGGCTACTGATACTGTGAAGCTTCCATCATCAAATTGTTGTGGCACAAATCACCATTCTGAGAAATCCCTTGATCTATTTCCTATGAATCCTGGCGGGGCATCTACTTCTTCATTTCAACATTCTAAAGGTTTCAGAAGGGCTACAGAATTTATGGGTCAAGGGTCCTTGAGTTGTCTAAAGAAAGAAAAGATACAAAACTCGAATGCACCTGCACAGAATAGAGGTCCTGGATCCCGAAAAGCTGCATGTACAGGTGGTGGTTTGGGCAAAAACTGTGGAACTATCCCTGTTATGCAGAAAGGATTTCTAACGGTGTCTGATCCTATGATGTCTCCCCAGAACTGCCACACCATTGAATATCCAATGCTAAAAAAATTGGAAGCTAACAATGGCAATGGGGCCATGAACCCTCCAAAGAGCAGTTCCATGTCTTTAATGTGCTCAATTAATAGAAACCCTGCAGATTTTAGCCTGCCAGAAGCTGGAAACGAGTACATGATCAGGGGTGAAGACCTGAGAGTTAGGAAGCGGATTAATCAAAGTGGGGACCGGAACAAGCGACGGAGGAACAGGAAGCAGACACCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003697 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006355 GO:0006464 GO:0006479 GO:0006807 GO:0006950 GO:0006970 GO:0006972 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008213 GO:0009628 GO:0009651 GO:0009791 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009909 GO:0009910 GO:0009987 GO:0010022 GO:0010073 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0018022 GO:0018193 GO:0018205 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032259 GO:0032501 GO:0032502 GO:0034968 GO:0036211 GO:0042538 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045892 GO:0045934 GO:0048367 GO:0048507 GO:0048519 GO:0048523 GO:0048580 GO:0048581 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051172 GO:0051239 GO:0051241 GO:0051252 GO:0051253 GO:0051276 GO:0060255 GO:0065007 GO:0070734 GO:0071704 GO:0071840 GO:0080090 GO:0097159 GO:1901363 GO:1901564 GO:1902679 GO:1903506 GO:1903507 GO:2000026 GO:2000112 GO:2000113 GO:2000241 GO:2000242 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

1284

Amino Acids

141.28

Weight (kDa)

8.7

Isoelectric Point (pI)

49.43

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012478)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G11530 AT5G11530 AT5G11530
fragaria_vesca	FvH4_2g35880 FvH4_2g35880
malus_domestica	MD08G1116300.v1.1 MD15G1096000.v1.1
prunus_persica	Prupe.1G450900_v2.0.a1
pyrus_communis	pycom08g09700
rosa_chinensis	RchiOBHm_Chr6g0305941
rosa_laevigata	RLG00000010844
rosa_multiflora	Rmu_sc0001809.1_g000052
rosa_roxburghii	Rroxscaffold_7G00162200
rosa_rugosa	Rorug06G0345500
rosa_samantha	Rh6AG457200 Rh6BG443900 Rh6CG471200 Rh6DG457700
rosa_wichuraiana	Rw6G039890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	3261
AarI	CACCTGC	1 cut(s)	3481
Acc16I	TGCGCA	1 cut(s)	3165
Acc36I	ACCTGC	3 cut(s)	2518, 3137, 3481
AccB7I	CCANNNNNTGG	1 cut(s)	3746
AciI	CCGC	6 cut(s)	149, 1821, 2740, 3154, 3357, 3793
AclWI	GGATC	8 cut(s)	406, 754, 1628, 1845, 2406, 3489, 3502, 3578
AcoI	YGGCCR	1 cut(s)	221
AcuI	CTGAAG	5 cut(s)	947, 1530, 1920, 2995, 3009
AfaI	GTAC	6 cut(s)	373, 447, 1068, 2843, 3514, 3758
AfiI	CCNNNNNNNGG	8 cut(s)	1186, 1448, 1614, 1733, 2095, 2657, 3251, 3746
AflII	CTTAAG	2 cut(s)	1307, 2422
AflIII	ACRYGT	1 cut(s)	1487
AhdI	GACNNNNNGTC	1 cut(s)	2251
AjnI	CCWGG	7 cut(s)	766, 1185, 2616, 2716, 2902, 3352, 3490
AjuI	GAANNNNNNNTTGG	4 cut(s)	2857, 2889, 3670, 3702
AloI	GAACNNNNNNTCC	2 cut(s)	2808, 2840
Alw21I	GWGCWC	5 cut(s)	165, 424, 2611, 2683, 3707
Alw26I	GTCTC	6 cut(s)	665, 697, 2259, 2634, 3196, 3600
Alw44I	GTGCAC	1 cut(s)	2607
AlwI	GGATC	8 cut(s)	406, 754, 1628, 1845, 2406, 3489, 3502, 3578
AlwNI	CAGNNNCTG	6 cut(s)	312, 725, 1355, 2510, 2670, 3746
Ama87I	CYCGRG	1 cut(s)	2637
AoxI	GGCC	3 cut(s)	221, 2713, 3663
ApaI	GGGCCC	1 cut(s)	2717
ApaLI	GTGCAC	1 cut(s)	2607
AseI	ATTAAT	2 cut(s)	3711, 3798
Asp700I	GAANNNNTTC	1 cut(s)	1174
AspLEI	GCGC	1 cut(s)	3166
AspS9I	GGNCC	8 cut(s)	470, 2507, 2713, 2714, 3426, 3488, 3663, 3811
AsuC2I	CCSGG	2 cut(s)	928, 2975
AsuHPI	GGTGA	6 cut(s)	251, 1099, 2060, 2404, 3305, 3782
AvaI	CYCGRG	1 cut(s)	2637
AvaII	GGWCC	5 cut(s)	470, 2507, 3426, 3488, 3811
AxyI	CCTNAGG	1 cut(s)	2460
BaeGI	GKGCMC	2 cut(s)	2611, 2717
BaeI	ACNNNNGTAYC	6 cut(s)	261, 294, 437, 470, 780, 813
BalI	TGGCCA	1 cut(s)	223
BamHI	GGATCC	1 cut(s)	3494
BanII	GRGCYC	1 cut(s)	2717
BbsI	GAAGAC	5 cut(s)	5, 299, 885, 2321, 3780
Bbv12I	GWGCWC	5 cut(s)	165, 424, 2611, 2683, 3707
BcgI	CGANNNNNNTGC	2 cut(s)	1462, 1496
BciT130I	CCWGG	7 cut(s)	768, 1187, 2618, 2718, 2904, 3354, 3492
BciVI	GTATCC	1 cut(s)	262
BclI	TGATCA	3 cut(s)	256, 2578, 3762
BcnI	CCSGG	2 cut(s)	928, 2975
BcoDI	GTCTC	6 cut(s)	665, 697, 2259, 2634, 3196, 3600
BfaI	CTAG	6 cut(s)	654, 849, 986, 1209, 1271, 2733
BfmI	CTRYAG	8 cut(s)	105, 873, 1863, 2595, 2652, 2671, 3405, 3723
BfrI	CTTAAG	2 cut(s)	1307, 2422
BfuAI	ACCTGC	3 cut(s)	2518, 3137, 3481
BfuI	GTATCC	1 cut(s)	262
BglII	AGATCT	1 cut(s)	109
BlpI	GCTNAGC	1 cut(s)	3131
Bme1390I	CCNGG	9 cut(s)	768, 928, 1187, 2618, 2718, 2904, 2975, 3354, 3492
Bme18I	GGWCC	5 cut(s)	470, 2507, 3426, 3488, 3811
BmeRI	GACNNNNNGTC	1 cut(s)	2251
BmeT110I	CYCGRG	1 cut(s)	2637
BmgT120I	GGNCC	8 cut(s)	470, 2507, 2713, 2714, 3426, 3488, 3663, 3811
BmiI	GGNNCC	5 cut(s)	2715, 3427, 3496, 3664, 3812
BmrFI	CCNGG	9 cut(s)	768, 928, 1187, 2618, 2718, 2904, 2975, 3354, 3492
BmrI	ACTGGG	1 cut(s)	1797
BmuI	ACTGGG	1 cut(s)	1797
BoxI	GACNNNNGTC	2 cut(s)	975, 3055
BpiI	GAAGAC	5 cut(s)	5, 299, 885, 2321, 3780
BplI	GAGNNNNNCTC	2 cut(s)	152, 184
BpmI	CTGGAG	2 cut(s)	284, 1182
Bpu10I	CCTNAGC	2 cut(s)	423, 2388
Bpu1102I	GCTNAGC	1 cut(s)	3131
BpuEI	CTTGAG	2 cut(s)	3182, 3451
BpuMI	CCSGG	2 cut(s)	928, 2975
Bsa29I	ATCGAT	1 cut(s)	1623
BsaAI	YACGTR	1 cut(s)	176
BsaBI	GATNNNNATC	1 cut(s)	2288
BsaI	GGTCTC	2 cut(s)	2634, 3196
BsaJI	CCNNGG	3 cut(s)	1727, 2716, 2717
BsaWI	WCCGGW	2 cut(s)	3244, 3813
BsaXI	ACNNNNNCTCC	2 cut(s)	2096, 2126
Bsc4I	CCNNNNNNNGG	8 cut(s)	1186, 1448, 1614, 1733, 2095, 2657, 3251, 3746
Bse118I	RCCGGY	1 cut(s)	2571
Bse1I	ACTGG	8 cut(s)	212, 346, 844, 1418, 1792, 2442, 2767, 2822
Bse21I	CCTNAGG	1 cut(s)	2460
Bse3DI	GCAATG	7 cut(s)	748, 1344, 1480, 2587, 3084, 3126, 3664
Bse8I	GATNNNNATC	1 cut(s)	2288
BseBI	CCWGG	7 cut(s)	768, 1187, 2618, 2718, 2904, 3354, 3492
BseCI	ATCGAT	1 cut(s)	1623
BseDI	CCNNGG	3 cut(s)	1727, 2716, 2717
BseJI	GATNNNNATC	1 cut(s)	2288
BseLI	CCNNNNNNNGG	8 cut(s)	1186, 1448, 1614, 1733, 2095, 2657, 3251, 3746
BseMI	GCAATG	7 cut(s)	748, 1344, 1480, 2587, 3084, 3126, 3664
BseNI	ACTGG	8 cut(s)	212, 346, 844, 1418, 1792, 2442, 2767, 2822
BseRI	GAGGAG	4 cut(s)	52, 1265, 1268, 2111
BseSI	GKGCMC	2 cut(s)	2611, 2717
BsgI	GTGCAG	4 cut(s)	353, 451, 3225, 3459
BshFI	GGCC	3 cut(s)	223, 2715, 3665
BshVI	ATCGAT	1 cut(s)	1623
BsiHKAI	GWGCWC	5 cut(s)	165, 424, 2611, 2683, 3707
BsiHKCI	CYCGRG	1 cut(s)	2637
BsiSI	CCGG	5 cut(s)	927, 2572, 2974, 3245, 3814
BslFI	GGGAC	3 cut(s)	1487, 2432, 3824
BslI	CCNNNNNNNGG	8 cut(s)	1186, 1448, 1614, 1733, 2095, 2657, 3251, 3746
BsmAI	GTCTC	6 cut(s)	665, 697, 2259, 2634, 3196, 3600
BsmFI	GGGAC	3 cut(s)	1487, 2432, 3824
BsmI	GAATGC	4 cut(s)	625, 907, 2823, 3472
BsnI	GGCC	3 cut(s)	223, 2715, 3665
Bso31I	GGTCTC	2 cut(s)	2634, 3196
BsoBI	CYCGRG	1 cut(s)	2637
Bsp120I	GGGCCC	1 cut(s)	2713
Bsp1286I	GDGCHC	6 cut(s)	165, 424, 2611, 2683, 2717, 3707
Bsp1407I	TGTACA	1 cut(s)	3512
Bsp1720I	GCTNAGC	1 cut(s)	3131
BspACI	CCGC	6 cut(s)	149, 1821, 2740, 3154, 3357, 3793
BspANI	GGCC	3 cut(s)	223, 2715, 3665
BspDI	ATCGAT	1 cut(s)	1623
BspHI	TCATGA	2 cut(s)	781, 2332
BspLI	GGNNCC	5 cut(s)	2715, 3427, 3496, 3664, 3812
BspMAI	CTGCAG	3 cut(s)	1867, 2656, 3727
BspMI	ACCTGC	3 cut(s)	2518, 3137, 3481
BspPI	GGATC	8 cut(s)	406, 754, 1628, 1845, 2406, 3489, 3502, 3578
BspQI	GCTCTTC	1 cut(s)	1400
BspTI	CTTAAG	2 cut(s)	1307, 2422
BspTNI	GGTCTC	2 cut(s)	2634, 3196
BsrDI	GCAATG	7 cut(s)	748, 1344, 1480, 2587, 3084, 3126, 3664
BsrFI	RCCGGY	1 cut(s)	2571
BsrGI	TGTACA	1 cut(s)	3512
BsrI	ACTGG	8 cut(s)	212, 346, 844, 1418, 1792, 2442, 2767, 2822
BssAI	RCCGGY	1 cut(s)	2571
BssECI	CCNNGG	3 cut(s)	1727, 2716, 2717
BssT1I	CCWWGG	1 cut(s)	1727
Bst2UI	CCWGG	7 cut(s)	768, 1187, 2618, 2718, 2904, 3354, 3492
Bst4CI	ACNGT	5 cut(s)	477, 523, 3277, 3539, 3577
Bst6I	CTCTTC	1 cut(s)	1400
BstAFI	CTTAAG	2 cut(s)	1307, 2422
BstAPI	GCANNNNNTGC	4 cut(s)	950, 1814, 2471, 2510
BstAUI	TGTACA	1 cut(s)	3512
BstBAI	YACGTR	1 cut(s)	176
BstC8I	GCNNGC	7 cut(s)	332, 1395, 1713, 2262, 2573, 2738, 3737
BstENI	CCTNNNNNAGG	1 cut(s)	2093
BstHHI	GCGC	1 cut(s)	3166
BstMAI	GTCTC	6 cut(s)	665, 697, 2259, 2634, 3196, 3600
BstMWI	GCNNNNNNNGC	9 cut(s)	327, 950, 1649, 1789, 1814, 1985, 2384, 2471, 2510
BstNI	CCWGG	7 cut(s)	768, 1187, 2618, 2718, 2904, 3354, 3492
BstNSI	RCATGY	4 cut(s)	1491, 1741, 2766, 3513
BstPAI	GACNNNNGTC	2 cut(s)	975, 3055
BstSCI	CCNGG	9 cut(s)	766, 926, 1185, 2616, 2716, 2902, 2973, 3352, 3490
BstSFI	CTRYAG	8 cut(s)	105, 873, 1863, 2595, 2652, 2671, 3405, 3723
BstSLI	GKGCMC	2 cut(s)	2611, 2717
BstV2I	GAAGAC	5 cut(s)	5, 299, 885, 2321, 3780
BstX2I	RGATCY	5 cut(s)	109, 398, 746, 1837, 3494
BstXI	CCANNNNNNTGG	1 cut(s)	73
BstYI	RGATCY	5 cut(s)	109, 398, 746, 1837, 3494
Bsu15I	ATCGAT	1 cut(s)	1623
Bsu36I	CCTNAGG	1 cut(s)	2460
BsuI	GTATCC	1 cut(s)	262
BsuRI	GGCC	3 cut(s)	223, 2715, 3665
BsuTUI	ATCGAT	1 cut(s)	1623
BtsI	GCAGTG	1 cut(s)	2909
BtsIMutI	CAGTG	2 cut(s)	1228, 2909
BveI	ACCTGC	3 cut(s)	2518, 3137, 3481
Cac8I	GCNNGC	7 cut(s)	332, 1395, 1713, 2262, 2573, 2738, 3737
CaiI	CAGNNNCTG	6 cut(s)	312, 725, 1355, 2510, 2670, 3746
CciI	TCATGA	2 cut(s)	781, 2332
CfoI	GCGC	1 cut(s)	3166
Cfr10I	RCCGGY	1 cut(s)	2571
Cfr13I	GGNCC	8 cut(s)	470, 2507, 2713, 2714, 3426, 3488, 3663, 3811
ClaI	ATCGAT	1 cut(s)	1623
CseI	GACGC	1 cut(s)	980
Csp6I	GTAC	6 cut(s)	372, 446, 1067, 2842, 3513, 3757
CspCI	CAANNNNNGTGG	4 cut(s)	3160, 3195, 3520, 3555
CviQI	GTAC	6 cut(s)	372, 446, 1067, 2842, 3513, 3757
DriI	GACNNNNNGTC	1 cut(s)	2251
EaeI	YGGCCR	1 cut(s)	221
Eam1104I	CTCTTC	1 cut(s)	1400
Eam1105I	GACNNNNNGTC	1 cut(s)	2251
EarI	CTCTTC	1 cut(s)	1400
Eco130I	CCWWGG	1 cut(s)	1727
Eco24I	GRGCYC	1 cut(s)	2717
Eco31I	GGTCTC	2 cut(s)	2634, 3196
Eco32I	GATATC	1 cut(s)	808
Eco47I	GGWCC	5 cut(s)	470, 2507, 3426, 3488, 3811
Eco57I	CTGAAG	5 cut(s)	947, 1530, 1920, 2995, 3009
Eco81I	CCTNAGG	1 cut(s)	2460
Eco88I	CYCGRG	1 cut(s)	2637
EcoNI	CCTNNNNNAGG	1 cut(s)	2093
EcoO109I	RGGNCCY	4 cut(s)	2507, 2714, 3426, 3488
EcoRII	CCWGG	7 cut(s)	766, 1185, 2616, 2716, 2902, 3352, 3490
EcoRV	GATATC	1 cut(s)	808
EcoT14I	CCWWGG	1 cut(s)	1727
EcoT22I	ATGCAT	6 cut(s)	1012, 1606, 1819, 2026, 2589, 3126
EcoT38I	GRGCYC	1 cut(s)	2717
ErhI	CCWWGG	1 cut(s)	1727
FalI	AAGNNNNNCTT	4 cut(s)	1567, 1599, 3191, 3223
FaqI	GGGAC	3 cut(s)	1487, 2432, 3824
FauI	CCCGC	1 cut(s)	3350
FbaI	TGATCA	3 cut(s)	256, 2578, 3762
FriOI	GRGCYC	1 cut(s)	2717
FspAI	RTGCGCAY	1 cut(s)	3165
FspBI	CTAG	6 cut(s)	654, 849, 986, 1209, 1271, 2733
FspI	TGCGCA	1 cut(s)	3165
GlaI	GCGC	1 cut(s)	3165
GsuI	CTGGAG	2 cut(s)	284, 1182
HaeIII	GGCC	3 cut(s)	223, 2715, 3665
HapII	CCGG	5 cut(s)	927, 2572, 2974, 3245, 3814
HgaI	GACGC	1 cut(s)	980
HhaI	GCGC	1 cut(s)	3166
Hin6I	GCGC	1 cut(s)	3164
HinP1I	GCGC	1 cut(s)	3164
HincII	GTYRAC	3 cut(s)	682, 937, 2634
HindII	GTYRAC	3 cut(s)	682, 937, 2634
HindIII	AAGCTT	2 cut(s)	959, 3281
HpaI	GTTAAC	1 cut(s)	682
HpaII	CCGG	5 cut(s)	927, 2572, 2974, 3245, 3814
HphI	GGTGA	6 cut(s)	251, 1099, 2060, 2404, 3305, 3782
Hpy166II	GTNNAC	9 cut(s)	473, 682, 764, 937, 1537, 1923, 2609, 2634, 2827
Hpy8I	GTNNAC	9 cut(s)	473, 682, 764, 937, 1537, 1923, 2609, 2634, 2827
Hpy99I	CGWCG	2 cut(s)	974, 3828
HpyCH4III	ACNGT	5 cut(s)	477, 523, 3277, 3539, 3577
HpyCH4IV	ACGT	6 cut(s)	175, 1069, 2744, 2840, 2896, 2925
HpyF10VI	GCNNNNNNNGC	9 cut(s)	327, 950, 1649, 1789, 1814, 1985, 2384, 2471, 2510
HpySE526I	ACGT	6 cut(s)	175, 1069, 2744, 2840, 2896, 2925
HspAI	GCGC	1 cut(s)	3164
KroI	GCCGGC	1 cut(s)	2571
KroNI	GCCGGC	1 cut(s)	2573
Ksp22I	TGATCA	3 cut(s)	256, 2578, 3762
KspAI	GTTAAC	1 cut(s)	682
LguI	GCTCTTC	1 cut(s)	1400
LmnI	GCTCC	3 cut(s)	514, 1163, 3006
MaeI	CTAG	6 cut(s)	654, 849, 986, 1209, 1271, 2733
MaeII	ACGT	6 cut(s)	175, 1069, 2744, 2840, 2896, 2925
MaeIII	GTNAC	3 cut(s)	41, 641, 2660
MflI	RGATCY	5 cut(s)	109, 398, 746, 1837, 3494
MhlI	GDGCHC	6 cut(s)	165, 424, 2611, 2683, 2717, 3707
MlsI	TGGCCA	1 cut(s)	223
MluNI	TGGCCA	1 cut(s)	223
MlyI	GAGTC	5 cut(s)	89, 289, 649, 902, 1054
MmeI	TCCRAC	3 cut(s)	1164, 1525, 2888
Mox20I	TGGCCA	1 cut(s)	223
Mph1103I	ATGCAT	6 cut(s)	1012, 1606, 1819, 2026, 2589, 3126
MroNI	GCCGGC	1 cut(s)	2571
MroXI	GAANNNNTTC	1 cut(s)	1174
MscI	TGGCCA	1 cut(s)	223
MslI	CAYNNNNRTG	5 cut(s)	711, 1428, 2282, 2406, 3072
Msp20I	TGGCCA	1 cut(s)	223
MspA1I	CMGCKG	7 cut(s)	262, 1823, 1941, 2207, 2267, 2657, 2670
MspCI	CTTAAG	2 cut(s)	1307, 2422
MspI	CCGG	5 cut(s)	927, 2572, 2974, 3245, 3814
MspR9I	CCNGG	9 cut(s)	768, 928, 1187, 2618, 2718, 2904, 2975, 3354, 3492
Mva1269I	GAATGC	4 cut(s)	625, 907, 2823, 3472
MvaI	CCWGG	7 cut(s)	768, 1187, 2618, 2718, 2904, 3354, 3492
MwoI	GCNNNNNNNGC	9 cut(s)	327, 950, 1649, 1789, 1814, 1985, 2384, 2471, 2510
NaeI	GCCGGC	1 cut(s)	2573
NciI	CCSGG	2 cut(s)	928, 2975
NgoMIV	GCCGGC	1 cut(s)	2571
NlaIV	GGNNCC	5 cut(s)	2715, 3427, 3496, 3664, 3812
NmuCI	GTSAC	2 cut(s)	41, 641
NsbI	TGCGCA	1 cut(s)	3165
NsiI	ATGCAT	6 cut(s)	1012, 1606, 1819, 2026, 2589, 3126
NspI	RCATGY	4 cut(s)	1491, 1741, 2766, 3513
PaeR7I	CTCGAG	1 cut(s)	2637
PagI	TCATGA	2 cut(s)	781, 2332
PaqCI	CACCTGC	1 cut(s)	3481
PasI	CCCWGGG	1 cut(s)	2717
PciI	ACATGT	1 cut(s)	1487
PciSI	GCTCTTC	1 cut(s)	1400
PcsI	WCGNNNNNNNCGW	1 cut(s)	1066
PctI	GAATGC	4 cut(s)	625, 907, 2823, 3472
PdiI	GCCGGC	1 cut(s)	2573
PdmI	GAANNNNTTC	1 cut(s)	1174
PfeI	GAWTC	9 cut(s)	230, 309, 404, 632, 835, 1130, 1352, 1437, 3349
PflMI	CCANNNNNTGG	1 cut(s)	3746
PfoI	TCCNGGA	1 cut(s)	3490
PleI	GAGTC	5 cut(s)	89, 289, 648, 901, 1053
PpsI	GAGTC	5 cut(s)	89, 289, 648, 901, 1053
Ppu21I	YACGTR	1 cut(s)	176
PpuMI	RGGWCCY	3 cut(s)	2507, 3426, 3488
PscI	ACATGT	1 cut(s)	1487
PshAI	GACNNNNGTC	2 cut(s)	975, 3055
PshBI	ATTAAT	2 cut(s)	3711, 3798
PsiI	TTATAA	1 cut(s)	3261
Psp5II	RGGWCCY	3 cut(s)	2507, 3426, 3488
Psp6I	CCWGG	7 cut(s)	766, 1185, 2616, 2716, 2902, 3352, 3490
PspGI	CCWGG	7 cut(s)	766, 1185, 2616, 2716, 2902, 3352, 3490
PspN4I	GGNNCC	5 cut(s)	2715, 3427, 3496, 3664, 3812
PspOMI	GGGCCC	1 cut(s)	2713
PspPI	GGNCC	8 cut(s)	470, 2507, 2713, 2714, 3426, 3488, 3663, 3811
PspPPI	RGGWCCY	3 cut(s)	2507, 3426, 3488
PstI	CTGCAG	3 cut(s)	1867, 2656, 3727
PstNI	CAGNNNCTG	6 cut(s)	312, 725, 1355, 2510, 2670, 3746
PsuI	RGATCY	5 cut(s)	109, 398, 746, 1837, 3494
PvuII	CAGCTG	6 cut(s)	262, 1941, 2207, 2267, 2657, 2670
RsaI	GTAC	6 cut(s)	373, 447, 1068, 2843, 3514, 3758
RsaNI	GTAC	6 cut(s)	372, 446, 1067, 2842, 3513, 3757
RseI	CAYNNNNRTG	5 cut(s)	711, 1428, 2282, 2406, 3072
SapI	GCTCTTC	1 cut(s)	1400
Sau96I	GGNCC	8 cut(s)	470, 2507, 2713, 2714, 3426, 3488, 3663, 3811
SchI	GAGTC	5 cut(s)	89, 289, 649, 902, 1054
ScrFI	CCNGG	9 cut(s)	768, 928, 1187, 2618, 2718, 2904, 2975, 3354, 3492
SduI	GDGCHC	6 cut(s)	165, 424, 2611, 2683, 2717, 3707
SfcI	CTRYAG	8 cut(s)	105, 873, 1863, 2595, 2652, 2671, 3405, 3723
Sfr274I	CTCGAG	1 cut(s)	2637
SinI	GGWCC	5 cut(s)	470, 2507, 3426, 3488, 3811
SlaI	CTCGAG	1 cut(s)	2637
SmiMI	CAYNNNNRTG	5 cut(s)	711, 1428, 2282, 2406, 3072
SmlI	CTYRAG	5 cut(s)	1307, 2422, 2637, 3197, 3430
SmoI	CTYRAG	5 cut(s)	1307, 2422, 2637, 3197, 3430
SsiI	CCGC	6 cut(s)	149, 1821, 2740, 3154, 3357, 3793
SspI	AATATT	1 cut(s)	2356
SspMI	CTAG	6 cut(s)	654, 849, 986, 1209, 1271, 2733
StyD4I	CCNGG	9 cut(s)	766, 926, 1185, 2616, 2716, 2902, 2973, 3352, 3490
StyI	CCWWGG	1 cut(s)	1727
TaaI	ACNGT	5 cut(s)	477, 523, 3277, 3539, 3577
TaiI	ACGT	6 cut(s)	178, 1072, 2747, 2843, 2899, 2928
TaqI	TCGA	5 cut(s)	753, 1623, 2638, 2883, 3464
TaqII	GACCGA	1 cut(s)	983
TatI	WGTACW	2 cut(s)	3512, 3756
TauI	GCSGC	1 cut(s)	152
TfiI	GAWTC	9 cut(s)	230, 309, 404, 632, 835, 1130, 1352, 1437, 3349
TscAI	CASTG	2 cut(s)	1228, 2916
TseFI	GTSAC	2 cut(s)	41, 641
Tsp45I	GTSAC	2 cut(s)	41, 641
TspGWI	ACGGA	2 cut(s)	265, 3841
TspRI	CASTG	2 cut(s)	1228, 2916
Van91I	CCANNNNNTGG	1 cut(s)	3746
Vha464I	CTTAAG	2 cut(s)	1307, 2422
VneI	GTGCAC	1 cut(s)	2607
VpaK11BI	GGWCC	5 cut(s)	470, 2507, 3426, 3488, 3811
VspI	ATTAAT	2 cut(s)	3711, 3798
XagI	CCTNNNNNAGG	1 cut(s)	2093
XceI	RCATGY	4 cut(s)	1491, 1741, 2766, 3513
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1901
XhoI	CTCGAG	1 cut(s)	2637
XmnI	GAANNNNTTC	1 cut(s)	1174
XspI	CTAG	6 cut(s)	654, 849, 986, 1209, 1271, 2733
Zsp2I	ATGCAT	6 cut(s)	1012, 1606, 1819, 2026, 2589, 3126

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.