Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0012478

Physical Location & Seq

Genomic Coordinates Forward (+)

63744549 .. 63749417

Gene Structure 4869 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G039890.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3840 bp

ATGGAGAAGGATATTTCGACAGATGATAATCTTATTAAGAGGAGTGATCCTATTATTGCTTCCAAGGCTGTGGGGTCTTTTGTAAAGATTGATTCTATATCCATAGATCTTGATGATGCAAATGATGACAACAGACATGCGGGGAAGTGTGAGCATTTCTCCATACGTGGTTACGTATCTGAAGTTCGAAAAAAGAACTGGAAGATATGTTGGCCATTTGCTTTAGACGGTGATTTGGACAAGTCGGATCAGGAGAAAACAGCTATGCTTCCTCCTTTGGATGCTCCAAAATTCAGATCGTGGTGTTGCCAGAATTGTCTGCGTGAAATTGGTTCTAAAGGTCATGGTACAGACCTTAATTGTCATGTTGGATCTAATTCCAAGTGCACTGGTGCTCAGATGCCACCCGCCACTGATACTGCATTGCTTCAGTCAGATTATCAACAAGGTCCGAAGTCAAAAACCGTTGAGGAAAAACAATTTCATGCTTATACTTATACTATTGTGGATGGCAGTGAGACACATCCTTCCTCACGTATCGACAAGAAAAAAAGGAATGGTGAAGTTTCACCCGCAACCATCATAGCGAATGAGAATGCCCTAGCAAATTGGGTGAGTCATGAAATGCCCAGATTCAATTCTGCGGAGACAGAAGTTAACACTAGTAGTAGGATGCAGGAGAGACATAATCATGTCACAGAAAAATTGGGTTGCAATGGATCTGTCAGAGTCTATAAGCCAGGATATGAAAGTCATGAAGATGCCAGCCTTGAGCTTGAGATTACAAAAAACAATTGCTGGATAAGGAATTCCACTCAGAATGGTGAAACTGAGTACCATTCATTTGCAGCCAACAAACAGGAGTCAATAAATGCTTCTGGACTATGTAATGGCAGGATGGTTGGCGAGGCAGGCAATCCTATCAAGGTTCAGACCAATATTTGTCGTCCTCTGATTTTAGATGAGTGTGATTATGCATCATCTGAAAATCATGAAAAGTCCAGTGGTTTTCATCGTAAGAAAAGTCGAAAGGTGCGTTTGTTGACTGAGTTGTTGTGTAATAAAGAGGATGCAAAGACCGATTACACCAGGACAGAAGATTCTCCTTCCAATATGATCAATAATACACCTGAGCTAGGATCTGTTTCCCAAGGTCAGGTGTCTCTCCAAGAAAATGTTAGAGTGGGTTCAGGAGAGAATAAAAAAAGGAAGTTGTCGGAGGAAGAAGAGAAGGGAGGCCAAGAGATGAGCCATCCAAAAATTTTGAGTAAAAAAGTGAAGACTTTTAGGCGAGATGGAGAAGCCGCCAATGCAATTGCAACTACTGGATTGGAAGAAGATGCATTGGCCAGAATTTCTTTGCAGGTTGATATGAAGAATAATTGGAGTAGATATGGAAATGAAAGGATCCATACTGTTGGTAAGAAGAAAGCTAAGAAATCTCATGACTTTGATGCATGGTCGTCCTTATCACCAACTGCAGAAAATGTGCCAATAGAAGCCCAGGACAAATTTGGAAATTCAAGCAAGAATGCTACTAATGGTGCTTCTTTTAGACCAATGTATGATCCATCAGTTAGAGAGAGTGATTTGCACTCTTCAAAGAAAGATAGAAAATCTGGTTTTGTTAAGAGGAAAGGCAAGATGCCACAATCTGATACTGGGCCGGTTTTTCTATCAAATACAAGGAAAGATGCAGAAATCAAGGCAAATGGGCAAGGAACTGTTAGATTTCATCCGGCAGAAGATTCGTCTACTGAGAAAGGGCTGGATCTTTCTCTCAACAGCTATTTGGCTACCCAAAGATATGGCGGAAAATGTCTTCCTCAACAAGAAGATGGATTTCCTTCCTTGTCAACTTGGAAAGATAGCACTTGCAAACTAGATGAGTTCATGAGGAAAAATGTGGAAGTCAATTATTTGGCGAATTTAAACAATCCTTCTACATCTATGGCAAATCCATTATCTGAGGATGGAGTACCTGGTGAACCAAGTAAAAAAGTTTACTCCTACAGCATGCCTATTCTGAATGAGAGGCAAAATTACAGCTCCCAGGTTGAACAAGGGAGCTGTTCTTTAATGCAGCAAATGGATATATCTTGCGGAAGCAAGAATCAGAAAATCATTGAGGTTGAGAAAAATTCAGGTGTGCCTGTTATTAGGAAGCATAGCAACCATCAAGCTGAGATGTCTGAAAAGGGTACTATAGATGACATACCAATGGAAATTGTTGAACTCATGGCGAAAAATCAGTATGAGAGATGCCTTCAAGAGACTCAAAATGATAAGCATGTATTAGAAACCCCAAGCAGAGCAAGGAATGCTCAGGTGATGGAGCATACTCAAGTATATGGCATTGGGGACTTGAGAGTATTAGAGGAAACCAGTCAGAAACGAAAAGCTCAGGCAAGAAATGCAAAAAATGGCACAACAAAGAAAAATGTGGCACCTGTCCAACAGAAGTCCGTTGATTATTTTCCTTATATCAATGGAAACCATTTTGGCCTGAGCCGTCTTGATCAAATGCATTGCACCGCAGGGTTTGGTCCATTCAGTCAGTCTCAAAAGAAGCCTTCACCACGAGGCCAATTTCCTGCTGCTGGCAACAGCAAATGTAGTTGTGCTCAAAGTTGCAAATGGGATGGAAATATGATGGGGCACAGGTTCTCGAATTCAAACTTGCAGAGCTTTGCAGCATGCAACACATGCCAATCTGTTCCACAATCAAAGGAAGAAGCAGCTCATCTTTGGTCACCTGTAATATCAGCTCACATGCCCTTTGCTTATAAGAATCCTCAGAAGGGTCCAGCCCAGTCATCTAATGTCAAAATGGTTTCACAGTCTCCTGGCTCACTGCAGAAAGGAAATGCCACTGGGGATTGTGACCTGAGTTTGAATCTGAATGCTCCCAACTTTGAGAAGCGTAATGAAGCTGTTGGTTCTGAAACTATCAGCAGAACAAATCCAGAGTACTCGTTCACTTGCAAACGTAACGGGACTGAGCCTCATCAAAATTCATTGGGGTCATTAGATTTATATTCTAATGAAACCATACCAGCAATGCATTTGCTCAGCCTCATGGATGCAGGGATGCGGTCAGGTGCATCCCTAAATATGGGTGGAAACCCGAAATTTCCCAAGAGACCCTTTCCTAATGATCTCAACTCTAAGGGATATCCTGGGCTGGATATTGGTCTTTATAAGGCTACTGATACTGTGAATCATCCATCATCAAACTGTTATGGGAAAAATCACCTTTCTGAGAAATCTCTCGATTTGTTTCCTACCAATCCAACTTTTGGGGCATCTTCATCTTCATTTGAACACTCAAAAAGTTTTGGAAGGGCTACAGACTTTATGGATCAAGTTTCGAGCTCTCAAAAGAAAGAAAAGATCCAAAGATCCCATTCACCTGCACAGAATAGAGGTCCTAGATCACAAAAATCTTTAGCTGCTGATGGTGGTTTTGGCAACAATCGTACAACTATCCCTGTTCATAGTATACCGAAAGGGTTCCTTCCTGTTTCTGGTCCTTTGATGTTTCCGCTGCACTACCACACCATTGCAAACTCAAGGAAACACAACTTGGAAACTCCTAATGCTAATGGAACCATGAAGCCTCCAAAGACTAGTTCGGAGTCTTCAATCTGCTGTATGAACAGAAATCCAGCTGATTTCAGCATGCCAGATGTAGGAAATGGGTACATGATTAGAGGTGAAGACCTAAAAGTTGGGAAGAAGATTTCTTCTGAAAAGAGGCACGGCTTATTTAAAGTGGAGCAGCAGAAGCGGCAGAGGAATACAAAACACACTATTGAAAAGGATCGCACGCGACATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003697 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006355 GO:0006464 GO:0006479 GO:0006807 GO:0006950 GO:0006970 GO:0006972 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008213 GO:0009628 GO:0009651 GO:0009791 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009909 GO:0009910 GO:0009987 GO:0010022 GO:0010073 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0018022 GO:0018193 GO:0018205 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032259 GO:0032501 GO:0032502 GO:0034968 GO:0036211 GO:0042538 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045892 GO:0045934 GO:0048367 GO:0048507 GO:0048519 GO:0048523 GO:0048580 GO:0048581 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051172 GO:0051239 GO:0051241 GO:0051252 GO:0051253 GO:0051276 GO:0060255 GO:0065007 GO:0070734 GO:0071704 GO:0071840 GO:0080090 GO:0097159 GO:1901363 GO:1901564 GO:1902679 GO:1903506 GO:1903507 GO:2000026 GO:2000112 GO:2000113 GO:2000241 GO:2000242 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

1279

Amino Acids

141.81

Weight (kDa)

8.85

Isoelectric Point (pI)

47.28

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012478)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G11530 AT5G11530 AT5G11530
fragaria_vesca	FvH4_2g35880 FvH4_2g35880
malus_domestica	MD08G1116300.v1.1 MD15G1096000.v1.1
prunus_persica	Prupe.1G450900_v2.0.a1
pyrus_communis	pycom08g09700
rosa_chinensis	RchiOBHm_Chr6g0305941
rosa_laevigata	RLG00000010844
rosa_multiflora	Rmu_sc0001809.1_g000052
rosa_roxburghii	Rroxscaffold_7G00162200
rosa_rugosa	Rorug06G0345500
rosa_samantha	Rh6AG457200 Rh6BG443900 Rh6CG471200 Rh6DG457700
rosa_wichuraiana	Rw6G039890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	2787, 3201
AarI	CACCTGC	1 cut(s)	3421
Acc36I	ACCTGC	2 cut(s)	1354, 3421
AccB1I	GGYRCC	1 cut(s)	2446
AccB7I	CCANNNNNTGG	1 cut(s)	3299
AccI	GTMKAC	2 cut(s)	1754, 3502
AccII	CGCG	1 cut(s)	3832
AcoI	YGGCCR	2 cut(s)	212, 1347
AcuI	CTGAAG	2 cut(s)	201, 413
AfaI	GTAC	7 cut(s)	349, 836, 1980, 2203, 2972, 3481, 3704
AfiI	CCNNNNNNNGG	8 cut(s)	1136, 1156, 2600, 2801, 3115, 3299, 3527, 3692
AhlI	ACTAGT	2 cut(s)	662, 3629
AjnI	CCWGG	7 cut(s)	739, 1088, 1503, 1981, 2052, 2845, 3178
AjuI	GAANNNNNNNTTGG	4 cut(s)	3569, 3601, 3616, 3648
Alw21I	GWGCWC	4 cut(s)	389, 397, 2626, 3377
Alw26I	GTCTC	8 cut(s)	512, 641, 676, 1167, 2267, 2565, 2847, 3136
Alw44I	GTGCAC	1 cut(s)	385
AoxI	GGCC	6 cut(s)	212, 1237, 1347, 1664, 2503, 2584
ApaLI	GTGCAC	1 cut(s)	385
ApeKI	GCWGC	8 cut(s)	848, 2083, 2597, 2693, 2738, 3452, 3547, 3781
Asp700I	GAANNNNTTC	1 cut(s)	3512
AspS9I	GGNCC	6 cut(s)	449, 1664, 2546, 2804, 3428, 3530
AsuII	TTCGAA	1 cut(s)	187
AvaII	GGWCC	5 cut(s)	449, 2546, 2804, 3428, 3530
BaeGI	GKGCMC	2 cut(s)	389, 2661
BalI	TGGCCA	2 cut(s)	214, 1349
BamHI	GGATCC	1 cut(s)	1407
BanI	GGYRCC	1 cut(s)	2446
BanII	GRGCYC	1 cut(s)	3377
BauI	CACGAG	1 cut(s)	2580
BbsI	GAAGAC	4 cut(s)	1286, 1814, 3633, 3726
Bbv12I	GWGCWC	4 cut(s)	389, 397, 2626, 3377
BbvI	GCAGC	8 cut(s)	860, 2095, 2584, 2705, 2750, 3439, 3534, 3793
BceAI	ACGGC	2 cut(s)	2496, 3778
BcgI	CGANNNNNNTGC	2 cut(s)	1731, 1765
BciT130I	CCWGG	7 cut(s)	741, 1090, 1505, 1983, 2054, 2847, 3180
BclI	TGATCA	2 cut(s)	1116, 2518
BcoDI	GTCTC	8 cut(s)	512, 641, 676, 1167, 2267, 2565, 2847, 3136
BcuI	ACTAGT	2 cut(s)	662, 3629
BfaI	CTAG	6 cut(s)	602, 663, 1136, 1883, 3432, 3630
BfmI	CTRYAG	5 cut(s)	1479, 2011, 2205, 2855, 3348
BfuAI	ACCTGC	2 cut(s)	1354, 3421
BglII	AGATCT	1 cut(s)	106
BlpI	GCTNAGC	1 cut(s)	3071
BmcAI	AGTACT	1 cut(s)	2972
Bme1390I	CCNGG	7 cut(s)	741, 1090, 1505, 1983, 2054, 2847, 3180
Bme18I	GGWCC	5 cut(s)	449, 2546, 2804, 3428, 3530
BmgT120I	GGNCC	6 cut(s)	449, 1664, 2546, 2804, 3428, 3530
BmiI	GGNNCC	5 cut(s)	1409, 2448, 2805, 3515, 3610
BmrFI	CCNGG	7 cut(s)	741, 1090, 1505, 1983, 2054, 2847, 3180
BmrI	ACTGGG	3 cut(s)	1671, 2806, 2883
BmuI	ACTGGG	3 cut(s)	1671, 2806, 2883
BpiI	GAAGAC	4 cut(s)	1286, 1814, 3633, 3726
BplI	GAGNNNNNCTC	2 cut(s)	143, 175
Bpu10I	CCTNAGC	4 cut(s)	1131, 2325, 2403, 2507
Bpu1102I	GCTNAGC	1 cut(s)	3071
Bpu14I	TTCGAA	1 cut(s)	187
BpuEI	CTTGAG	5 cut(s)	791, 797, 2328, 2386, 3556
BsaAI	YACGTR	3 cut(s)	167, 175, 536
BsaBI	GATNNNNATC	1 cut(s)	27
BsaI	GGTCTC	1 cut(s)	3136
BsaJI	CCNNGG	5 cut(s)	63, 1150, 1503, 2052, 3179
Bsc4I	CCNNNNNNNGG	8 cut(s)	1136, 1156, 2600, 2801, 3115, 3299, 3527, 3692
Bse118I	RCCGGY	1 cut(s)	1666
Bse1I	ACTGG	8 cut(s)	203, 394, 1002, 1330, 1666, 2385, 2812, 2878
Bse3DI	GCAATG	5 cut(s)	422, 721, 2527, 3066, 3561
Bse8I	GATNNNNATC	1 cut(s)	27
BseBI	CCWGG	7 cut(s)	741, 1090, 1505, 1983, 2054, 2847, 3180
BseDI	CCNNGG	5 cut(s)	63, 1150, 1503, 2052, 3179
BseJI	GATNNNNATC	1 cut(s)	27
BseLI	CCNNNNNNNGG	8 cut(s)	1136, 1156, 2600, 2801, 3115, 3299, 3527, 3692
BseMI	GCAATG	5 cut(s)	422, 721, 2527, 3066, 3561
BseNI	ACTGG	8 cut(s)	203, 394, 1002, 1330, 1666, 2385, 2812, 2878
BseRI	GAGGAG	1 cut(s)	55
BseSI	GKGCMC	2 cut(s)	389, 2661
BseXI	GCAGC	8 cut(s)	860, 2095, 2584, 2705, 2750, 3439, 3534, 3793
BsgI	GTGCAG	2 cut(s)	3399, 3533
Bsh1236I	CGCG	1 cut(s)	3832
BshFI	GGCC	6 cut(s)	214, 1239, 1349, 1666, 2505, 2586
BshNI	GGYRCC	1 cut(s)	2446
BsiHKAI	GWGCWC	4 cut(s)	389, 397, 2626, 3377
BsiSI	CCGG	2 cut(s)	1667, 1739
BslFI	GGGAC	2 cut(s)	2375, 3010
BslI	CCNNNNNNNGG	8 cut(s)	1136, 1156, 2600, 2801, 3115, 3299, 3527, 3692
BsmAI	GTCTC	8 cut(s)	512, 641, 676, 1167, 2267, 2565, 2847, 3136
BsmFI	GGGAC	2 cut(s)	2375, 3010
BsmI	GAATGC	4 cut(s)	601, 1537, 2326, 2908
BsnI	GGCC	6 cut(s)	214, 1239, 1349, 1666, 2505, 2586
Bso31I	GGTCTC	1 cut(s)	3136
Bsp119I	TTCGAA	1 cut(s)	187
Bsp1286I	GDGCHC	5 cut(s)	389, 397, 2626, 2661, 3377
Bsp1720I	GCTNAGC	1 cut(s)	3071
BspANI	GGCC	6 cut(s)	214, 1239, 1349, 1666, 2505, 2586
BspFNI	CGCG	1 cut(s)	3832
BspHI	TCATGA	5 cut(s)	619, 754, 991, 1444, 1893
BspLI	GGNNCC	5 cut(s)	1409, 2448, 2805, 3515, 3610
BspMAI	CTGCAG	2 cut(s)	1483, 2859
BspMI	ACCTGC	2 cut(s)	1354, 3421
BspT104I	TTCGAA	1 cut(s)	187
BspT107I	GGYRCC	1 cut(s)	2446
BspTNI	GGTCTC	1 cut(s)	3136
BsrDI	GCAATG	5 cut(s)	422, 721, 2527, 3066, 3561
BsrFI	RCCGGY	1 cut(s)	1666
BsrI	ACTGG	8 cut(s)	203, 394, 1002, 1330, 1666, 2385, 2812, 2878
BssAI	RCCGGY	1 cut(s)	1666
BssECI	CCNNGG	5 cut(s)	63, 1150, 1503, 2052, 3179
BssNAI	GTATAC	1 cut(s)	3503
BssSI	CACGAG	1 cut(s)	2580
BssT1I	CCWWGG	2 cut(s)	63, 1150
Bst1107I	GTATAC	1 cut(s)	3503
Bst2BI	CACGAG	1 cut(s)	2580
Bst2UI	CCWGG	7 cut(s)	741, 1090, 1505, 1983, 2054, 2847, 3180
Bst4CI	ACNGT	7 cut(s)	230, 466, 1417, 1726, 2841, 3217, 3239
Bst6I	CTCTTC	2 cut(s)	1221, 1603
BstAPI	GCANNNNNTGC	3 cut(s)	2321, 2414, 2706
BstBAI	YACGTR	3 cut(s)	167, 175, 536
BstBI	TTCGAA	1 cut(s)	187
BstC8I	GCNNGC	7 cut(s)	766, 913, 2018, 2602, 2698, 3683, 3830
BstEII	GGTNACC	1 cut(s)	2751
BstENI	CCTNNNNNAGG	1 cut(s)	1134
BstFNI	CGCG	1 cut(s)	3832
BstMAI	GTCTC	8 cut(s)	512, 641, 676, 1167, 2267, 2565, 2847, 3136
BstMWI	GCNNNNNNNGC	8 cut(s)	65, 912, 1310, 2321, 2414, 2706, 3787, 3790
BstNI	CCWGG	7 cut(s)	741, 1090, 1505, 1983, 2054, 2847, 3180
BstNSI	RCATGY	7 cut(s)	140, 2020, 2294, 2700, 2709, 2776, 3685
BstPI	GGTNACC	1 cut(s)	2751
BstSCI	CCNGG	7 cut(s)	739, 1088, 1503, 1981, 2052, 2845, 3178
BstSFI	CTRYAG	5 cut(s)	1479, 2011, 2205, 2855, 3348
BstSLI	GKGCMC	2 cut(s)	389, 2661
BstSNI	TACGTA	1 cut(s)	175
BstUI	CGCG	1 cut(s)	3832
BstV1I	GCAGC	8 cut(s)	860, 2095, 2584, 2705, 2750, 3439, 3534, 3793
BstV2I	GAAGAC	4 cut(s)	1286, 1814, 3633, 3726
BstX2I	RGATCY	8 cut(s)	106, 371, 719, 1139, 1407, 1771, 3393, 3401
BstXI	CCANNNNNNTGG	3 cut(s)	70, 1418, 1808
BstYI	RGATCY	8 cut(s)	106, 371, 719, 1139, 1407, 1771, 3393, 3401
BstZ17I	GTATAC	1 cut(s)	3503
BsuRI	GGCC	6 cut(s)	214, 1239, 1349, 1666, 2505, 2586
BtsI	GCAGTG	2 cut(s)	520, 2852
BtsIMutI	CAGTG	6 cut(s)	387, 411, 520, 1009, 2852, 2871
BveI	ACCTGC	2 cut(s)	1354, 3421
Cac8I	GCNNGC	7 cut(s)	766, 913, 2018, 2602, 2698, 3683, 3830
CciI	TCATGA	5 cut(s)	619, 754, 991, 1444, 1893
Cfr10I	RCCGGY	1 cut(s)	1666
Cfr13I	GGNCC	6 cut(s)	449, 1664, 2546, 2804, 3428, 3530
CsiI	ACCWGGT	1 cut(s)	1981
Csp6I	GTAC	7 cut(s)	348, 835, 1979, 2202, 2971, 3480, 3703
CviQI	GTAC	7 cut(s)	348, 835, 1979, 2202, 2971, 3480, 3703
DraI	TTTAAA	2 cut(s)	1932, 3772
EaeI	YGGCCR	2 cut(s)	212, 1347
Eam1104I	CTCTTC	2 cut(s)	1221, 1603
EarI	CTCTTC	2 cut(s)	1221, 1603
EciI	GGCGGA	1 cut(s)	1827
Ecl136II	GAGCTC	1 cut(s)	3375
Eco105I	TACGTA	1 cut(s)	175
Eco130I	CCWWGG	2 cut(s)	63, 1150
Eco24I	GRGCYC	1 cut(s)	3377
Eco31I	GGTCTC	1 cut(s)	3136
Eco32I	GATATC	1 cut(s)	3176
Eco47I	GGWCC	5 cut(s)	449, 2546, 2804, 3428, 3530
Eco53kI	GAGCTC	1 cut(s)	3375
Eco57I	CTGAAG	2 cut(s)	201, 413
Eco91I	GGTNACC	1 cut(s)	2751
EcoICRI	GAGCTC	1 cut(s)	3375
EcoNI	CCTNNNNNAGG	1 cut(s)	1134
EcoO109I	RGGNCCY	1 cut(s)	3428
EcoO65I	GGTNACC	1 cut(s)	2751
EcoRI	GAATTC	2 cut(s)	808, 2671
EcoRII	CCWGG	7 cut(s)	739, 1088, 1503, 1981, 2052, 2845, 3178
EcoRV	GATATC	1 cut(s)	3176
EcoT14I	CCWWGG	2 cut(s)	63, 1150
EcoT22I	ATGCAT	5 cut(s)	979, 1345, 1459, 2529, 3066
EcoT38I	GRGCYC	1 cut(s)	3377
ErhI	CCWWGG	2 cut(s)	63, 1150
FalI	AAGNNNNNCTT	4 cut(s)	3131, 3163, 3501, 3533
FaqI	GGGAC	2 cut(s)	2375, 3010
FauI	CCCGC	3 cut(s)	133, 415, 580
FbaI	TGATCA	2 cut(s)	1116, 2518
FblI	GTMKAC	2 cut(s)	1754, 3502
FriOI	GRGCYC	1 cut(s)	3377
FspBI	CTAG	6 cut(s)	602, 663, 1136, 1883, 3432, 3630
HaeIII	GGCC	6 cut(s)	214, 1239, 1349, 1666, 2505, 2586
HapII	CCGG	2 cut(s)	1667, 1739
HincII	GTYRAC	3 cut(s)	658, 1044, 1857
HindII	GTYRAC	3 cut(s)	658, 1044, 1857
HpaI	GTTAAC	1 cut(s)	658
HpaII	CCGG	2 cut(s)	1667, 1739
Hpy166II	GTNNAC	9 cut(s)	387, 658, 1044, 1755, 1857, 1988, 2005, 2979, 3503
Hpy8I	GTNNAC	9 cut(s)	387, 658, 1044, 1755, 1857, 1988, 2005, 2979, 3503
HpyCH4III	ACNGT	7 cut(s)	230, 466, 1417, 1726, 2841, 3217, 3239
HpyCH4IV	ACGT	4 cut(s)	166, 174, 535, 2989
HpyF10VI	GCNNNNNNNGC	8 cut(s)	65, 912, 1310, 2321, 2414, 2706, 3787, 3790
HpySE526I	ACGT	4 cut(s)	166, 174, 535, 2989
Ksp22I	TGATCA	2 cut(s)	1116, 2518
KspAI	GTTAAC	1 cut(s)	658
LmnI	GCTCC	6 cut(s)	289, 2054, 2067, 2335, 2911, 3778
Lsp1109I	GCAGC	8 cut(s)	860, 2095, 2584, 2705, 2750, 3439, 3534, 3793
MabI	ACCWGGT	1 cut(s)	1981
MaeI	CTAG	6 cut(s)	602, 663, 1136, 1883, 3432, 3630
MaeII	ACGT	4 cut(s)	166, 174, 535, 2989
MaeIII	GTNAC	5 cut(s)	170, 694, 2751, 2882, 2990
MfeI	CAATTG	2 cut(s)	793, 1314
MflI	RGATCY	8 cut(s)	106, 371, 719, 1139, 1407, 1771, 3393, 3401
MhlI	GDGCHC	5 cut(s)	389, 397, 2626, 2661, 3377
MlsI	TGGCCA	2 cut(s)	214, 1349
MluNI	TGGCCA	2 cut(s)	214, 1349
MlyI	GAGTC	5 cut(s)	625, 738, 872, 2269, 3647
MmeI	TCCRAC	5 cut(s)	225, 349, 1197, 2479, 3317
Mox20I	TGGCCA	2 cut(s)	214, 1349
Mph1103I	ATGCAT	5 cut(s)	979, 1345, 1459, 2529, 3066
MroXI	GAANNNNTTC	1 cut(s)	3512
MscI	TGGCCA	2 cut(s)	214, 1349
MseI	TTAA	7 cut(s)	36, 357, 657, 1629, 1931, 2078, 3771
MslI	CAYNNNNRTG	3 cut(s)	690, 759, 2219
Msp20I	TGGCCA	2 cut(s)	214, 1349
MspA1I	CMGCKG	2 cut(s)	3547, 3671
MspI	CCGG	2 cut(s)	1667, 1739
MspR9I	CCNGG	7 cut(s)	741, 1090, 1505, 1983, 2054, 2847, 3180
MunI	CAATTG	2 cut(s)	793, 1314
Mva1269I	GAATGC	4 cut(s)	601, 1537, 2326, 2908
MvaI	CCWGG	7 cut(s)	741, 1090, 1505, 1983, 2054, 2847, 3180
MvnI	CGCG	1 cut(s)	3832
MwoI	GCNNNNNNNGC	8 cut(s)	65, 912, 1310, 2321, 2414, 2706, 3787, 3790
NlaIV	GGNNCC	5 cut(s)	1409, 2448, 2805, 3515, 3610
NmuCI	GTSAC	3 cut(s)	694, 2751, 2882
NsiI	ATGCAT	5 cut(s)	979, 1345, 1459, 2529, 3066
NspI	RCATGY	7 cut(s)	140, 2020, 2294, 2700, 2709, 2776, 3685
NspV	TTCGAA	1 cut(s)	187
PaeI	GCATGC	3 cut(s)	2020, 2700, 3685
PagI	TCATGA	5 cut(s)	619, 754, 991, 1444, 1893
PaqCI	CACCTGC	1 cut(s)	3421
PcsI	WCGNNNNNNNCGW	1 cut(s)	1033
PctI	GAATGC	4 cut(s)	601, 1537, 2326, 2908
PdmI	GAANNNNTTC	1 cut(s)	3512
PfeI	GAWTC	8 cut(s)	92, 633, 1100, 1748, 2113, 2791, 2896, 3220
PflMI	CCANNNNNTGG	1 cut(s)	3299
PleI	GAGTC	5 cut(s)	624, 737, 871, 2269, 3646
PpsI	GAGTC	5 cut(s)	624, 737, 871, 2269, 3646
Ppu21I	YACGTR	3 cut(s)	167, 175, 536
PpuMI	RGGWCCY	1 cut(s)	3428
PsiI	TTATAA	2 cut(s)	2787, 3201
Psp124BI	GAGCTC	1 cut(s)	3377
Psp5II	RGGWCCY	1 cut(s)	3428
Psp6I	CCWGG	7 cut(s)	739, 1088, 1503, 1981, 2052, 2845, 3178
PspEI	GGTNACC	1 cut(s)	2751
PspGI	CCWGG	7 cut(s)	739, 1088, 1503, 1981, 2052, 2845, 3178
PspN4I	GGNNCC	5 cut(s)	1409, 2448, 2805, 3515, 3610
PspPI	GGNCC	6 cut(s)	449, 1664, 2546, 2804, 3428, 3530
PspPPI	RGGWCCY	1 cut(s)	3428
PsrI	GAACNNNNNNTAC	2 cut(s)	168, 200
PstI	CTGCAG	2 cut(s)	1483, 2859
PsuI	RGATCY	8 cut(s)	106, 371, 719, 1139, 1407, 1771, 3393, 3401
PvuII	CAGCTG	1 cut(s)	3671
RsaI	GTAC	7 cut(s)	349, 836, 1980, 2203, 2972, 3481, 3704
RsaNI	GTAC	7 cut(s)	348, 835, 1979, 2202, 2971, 3480, 3703
RseI	CAYNNNNRTG	3 cut(s)	690, 759, 2219
SacI	GAGCTC	1 cut(s)	3377
SaqAI	TTAA	7 cut(s)	36, 357, 657, 1629, 1931, 2078, 3771
Sau96I	GGNCC	6 cut(s)	449, 1664, 2546, 2804, 3428, 3530
ScaI	AGTACT	1 cut(s)	2972
SchI	GAGTC	5 cut(s)	625, 738, 872, 2269, 3647
ScrFI	CCNGG	7 cut(s)	741, 1090, 1505, 1983, 2054, 2847, 3180
SduI	GDGCHC	5 cut(s)	389, 397, 2626, 2661, 3377
SexAI	ACCWGGT	1 cut(s)	1981
SfcI	CTRYAG	5 cut(s)	1479, 2011, 2205, 2855, 3348
SfuI	TTCGAA	1 cut(s)	187
SinI	GGWCC	5 cut(s)	449, 2546, 2804, 3428, 3530
SmiMI	CAYNNNNRTG	3 cut(s)	690, 759, 2219
SmlI	CTYRAG	5 cut(s)	770, 776, 2343, 2365, 3571
SmoI	CTYRAG	5 cut(s)	770, 776, 2343, 2365, 3571
SnaBI	TACGTA	1 cut(s)	175
SpeI	ACTAGT	2 cut(s)	662, 3629
SphI	GCATGC	3 cut(s)	2020, 2700, 3685
SspI	AATATT	1 cut(s)	940
SspMI	CTAG	6 cut(s)	602, 663, 1136, 1883, 3432, 3630
SstI	GAGCTC	1 cut(s)	3377
StyD4I	CCNGG	7 cut(s)	739, 1088, 1503, 1981, 2052, 2845, 3178
StyI	CCWWGG	2 cut(s)	63, 1150
TaaI	ACNGT	7 cut(s)	230, 466, 1417, 1726, 2841, 3217, 3239
TaiI	ACGT	4 cut(s)	169, 177, 538, 2992
TaqI	TCGA	7 cut(s)	17, 187, 540, 1027, 2669, 3273, 3371
TaqII	GACCGA	1 cut(s)	1094
TatI	WGTACW	1 cut(s)	2970
TauI	GCSGC	2 cut(s)	1307, 3793
TfiI	GAWTC	8 cut(s)	92, 633, 1100, 1748, 2113, 2791, 2896, 3220
Tru1I	TTAA	7 cut(s)	36, 357, 657, 1629, 1931, 2078, 3771
Tru9I	TTAA	7 cut(s)	36, 357, 657, 1629, 1931, 2078, 3771
TscAI	CASTG	6 cut(s)	394, 418, 520, 1009, 2859, 2878
TseFI	GTSAC	3 cut(s)	694, 2751, 2882
TseI	GCWGC	8 cut(s)	848, 2083, 2597, 2693, 2738, 3452, 3547, 3781
Tsp45I	GTSAC	3 cut(s)	694, 2751, 2882
TspGWI	ACGGA	1 cut(s)	2455
TspRI	CASTG	6 cut(s)	394, 418, 520, 1009, 2859, 2878
Van91I	CCANNNNNTGG	1 cut(s)	3299
VneI	GTGCAC	1 cut(s)	385
VpaK11BI	GGWCC	5 cut(s)	449, 2546, 2804, 3428, 3530
XagI	CCTNNNNNAGG	1 cut(s)	1134
XceI	RCATGY	7 cut(s)	140, 2020, 2294, 2700, 2709, 2776, 3685
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1511
XmiI	GTMKAC	2 cut(s)	1754, 3502
XmnI	GAANNNNTTC	1 cut(s)	3512
XspI	CTAG	6 cut(s)	602, 663, 1136, 1883, 3432, 3630
ZrmI	AGTACT	1 cut(s)	2972
Zsp2I	ATGCAT	5 cut(s)	979, 1345, 1459, 2529, 3066

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.