Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001809.1

Orthogroup ID

OG0012478

Physical Location & Seq

Genomic Coordinates Forward (+)

269805 .. 276106

Gene Structure 6302 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001809.1_g000052.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4089 bp

atgccaccacgtgtaggggatccattggcggggttttgcgaaaattcgcactccaattccactcggtcagctgcgaatctcgggccgcagctgggggtcgggtcttggcgctccggcgggctatgtgttagtatcattttctcggcgcgccgtgcaggatcggtggagcgagctaaaacgaggtcgtttcgggtcgtcgtcgatcgaatcgaggtcggtttttatgtggtgtttgtattcggatgctataacatggagaaggatatttcgacagatgataatcttattaagaggagtgatcctattattgcttccaaggctgtggggtcttttgtaaagattgattctatatccatagatcttgatgatgcaaatgatgacaacagacatgcggggaagtgtgagcatttctccatacgtggttatgtatctgaagttcgaaaaaagaactggaagatttgttggccatttgctttagacggcgatttggacaagtcggatcaggagaaaacagctatgcttcctcctttggatgctccaaaattcagatcgtggtgttgccagaattgtctgcgtgaaattggttctaaaggtcatggtacagaccttaattgtcatgttggatctaattccaagtgcactggtgctcagatgccacccgccactgatactgcattgcttcagtcagattatcaacaaggtccgaagtcaaaaaccgttgaggaaaaacaatttcatgcttatacttatactattgtggatggcagtgacacacatccttcctcacgtatcgataagaaaaaaaggaatggtgaagtttcacccacaaccatcatagcgaatgagaatgccctagcaaattgggtgagtcatgaaatgcccagattcaattctgcggagacagaagttaacactagtaggatgcaggagagacataatcatgtcacagaaaaattgggttgcaatggatctgtcagagtctataagccagaatgtgaaagtcatgaagatgccagccttgagcttgagattacaaaaaacaattgttggataaggaattccactcagaatggtgaaactgagtaccattcatttgcagccaacaaacaggagtcaataaatgcttctggactatgtaatggcaggatggttggcgaggcaggcaatcctatcaaggttcagaccaatgtttgtcgtcctctgattttagatgagtgtgattatgcatcatctgaaaatcatgaaaagtccagtggttttcatcgtaagaaaagtcgaaaggtgcgtttgttgactgagttgttgtgtaataaagaggatgcaaagaccgattacaccaggacagaagattctccttccaatatgatcaataatacatctgagctaggatctgtttcccaaggtcaggtgtctctccaagaaaatgttagagtgggttcaggagagaataaaaaaaggaagttgtcggaggaagaagagaagggaggccaagagatgagccatccaaaaattttgagtaaaaaagtgaagacttttaggcgagatggagaagccgccaatgcaattgcaactactggattggaagaagatgcattggccagaatttctttgcaggttgatatgaagaataattggagtagatatggaaatgaaaggatccatactgttggtaagaagaaagctaagaaatctcatgactttgatgcatggtcttccttatcaccaactgcagaaaatgtgccaatagaagcccaggacaaatttggaaattcaagcaagaatgctactaatggtgcttcttttagaccaatgtatgatccatcagttagagagagtgatttgcactcttcaaagaaagatagaaaatctggttttgttaagaggaaaggcaagatgccacaatctgatactgggccggtttttctatcaaatacaaggaaagatgcagaaatcaaggcaaatgggcaaggaactgttagatttcatccggcagaagatgcatctactgagaaagggctggatctttctctcaacagctatttggctacccaaagatatggcggaaaatgtcttcctcaacaagaagatggatttccttccttgtcaacttggaaagatagcacttgcaaactagatgagttcatgaggaaaaatgtggaagtcaattatttggcgaatttaaacaaaccttctacatctatggcaaatccattatctgaggatggagtacctggtgaaccaagtaaaaaagtttactcctacagcatgcctattctgaatgagaggcaaaattacagctcccaggttgaacaagggagctgttctttaatgcagcaaatggatatatcttgcggaagcaagaatcagaaaatcattgaggttgagaaaaattcaggtgtgcctgttattaggaagcatagcaaccatcaagctgagatgtctgaaaagggtactatagatgacataccaatggaaattgttgaactcatggcgaaaaatcagtatgagagatgtcttcaagagactcaaaatgataagcatgtattagaaaccccaagcagagcaagaaatgctcagatgatggagcatactcaagtatatggcattggggacttgagagtattagaggaaaccagtcagaaacgaaaagctcaggcaagaaatgcaaaaaatggcacaacaaagaaaaatgtggcacctgtccaacagaagtccgttgattattttccttatatcaatggaaaccattttggcctgaaccgtcttgatcaaatgcattgcaccgcagggtttggtccattcagtcagtctcaaaagaagccttcaccacgaggccaatttcctgctgctggcaacagcaaatgtagctgtgctcaaagttgcaaatgggatggaaatatgatggggcacaggttctcgaattcaaacttgcagagctttgcagcatgcaacacatgccaatctgttccacaatcaaaggaagaagcagctcatctttggtcacctgtaatatcagctcacatgccctttgcttataagaatcctcagaagggtccagcccagtcatctaatgtcaaaatggtttcacagtctcctggctcactgcagaaaggaaatgccactggggattgtgacctgagtttgaatctgaatgctcccaactttgagaagcgtaatgaagctgttggttctgaaactatcagcagaacaaatccagagtactcgttcacttgcaaacgtaacgggactgagcctcatcaaaattcattggggtcattagatttatattctaatgaaaccataccagcaatgcatttgctcagcctcatggatgcagggatgcggtcaggtgcatccttaaatatgggtggaaacccgaaatttcccaagagaccctttcctaatgatctcaactctaagggatatcctgggctggatattggtctttataaggctgctgatactgtgaatcatccatcatcaaactgttatgggaaaaatcacctttctgagaaatctctcgatttgtttcctaccaatccaacttttggggcatcttcatcttcatttgaacactcaaaaagttttggaagggctacagactttatggatcaagtttcgagctctcaaaagaaagaaaagatccaaagatcccattcacctgcacagaatagaggtcctagatcacaaaaatctttagctgctgatggtggttttggcaacaatcgtacaactatccctgttcatagtataccgaaagggttccttcctgtttctggtcctttgatgtttccgctgcactaccacaccattgcaaattcaaggaaacacaacttggaaactcctaatgctaatggaaccatgaagcctccaaagactagttcggagtcttcaatctgctgtatgaacagaaatccagctgatttcagcatgccagatgtaggaaatgggtacatgattagaggtgaagacctaaaagttgggaagaagatttcttctgaaaagaggcacggcttatttaaagtggagcagcagaagcggcagaggaatacaaaacacactattgaaaaggatcgcacgcgacattga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003697 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006355 GO:0006464 GO:0006479 GO:0006807 GO:0006950 GO:0006970 GO:0006972 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008213 GO:0009628 GO:0009651 GO:0009791 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009909 GO:0009910 GO:0009987 GO:0010022 GO:0010073 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0018022 GO:0018193 GO:0018205 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032259 GO:0032501 GO:0032502 GO:0034968 GO:0036211 GO:0042538 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045892 GO:0045934 GO:0048367 GO:0048507 GO:0048519 GO:0048523 GO:0048580 GO:0048581 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051172 GO:0051239 GO:0051241 GO:0051252 GO:0051253 GO:0051276 GO:0060255 GO:0065007 GO:0070734 GO:0071704 GO:0071840 GO:0080090 GO:0097159 GO:1901363 GO:1901564 GO:1902679 GO:1903506 GO:1903507 GO:2000026 GO:2000112 GO:2000113 GO:2000241 GO:2000242 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

1362

Amino Acids

150.81

Weight (kDa)

8.93

Isoelectric Point (pI)

46.6

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012478)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G11530 AT5G11530 AT5G11530
fragaria_vesca	FvH4_2g35880 FvH4_2g35880
malus_domestica	MD08G1116300.v1.1 MD15G1096000.v1.1
prunus_persica	Prupe.1G450900_v2.0.a1
pyrus_communis	pycom08g09700
rosa_chinensis	RchiOBHm_Chr6g0305941
rosa_laevigata	RLG00000010844
rosa_multiflora	Rmu_sc0001809.1_g000052
rosa_roxburghii	Rroxscaffold_7G00162200
rosa_rugosa	Rorug06G0345500
rosa_samantha	Rh6AG457200 Rh6BG443900 Rh6CG471200 Rh6DG457700
rosa_wichuraiana	Rw6G039890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	3036, 3450
AarI	CACCTGC	1 cut(s)	3670
Acc36I	ACCTGC	2 cut(s)	1603, 3670
AccB1I	GGYRCC	1 cut(s)	2695
AccB7I	CCANNNNNTGG	1 cut(s)	3548
AccI	GTMKAC	1 cut(s)	3751
AccII	CGCG	2 cut(s)	148, 4081
AcoI	YGGCCR	2 cut(s)	464, 1596
AcuI	CTGAAG	2 cut(s)	453, 665
AcvI	CACGTG	1 cut(s)	11
AdeI	CACNNNGTG	1 cut(s)	11
AfaI	GTAC	7 cut(s)	601, 1085, 2229, 2452, 3221, 3730, 3953
AfiI	CCNNNNNNNGG	9 cut(s)	14, 29, 92, 1405, 2849, 3050, 3548, 3776, 3941
AflIII	ACRYGT	1 cut(s)	10
AhlI	ACTAGT	2 cut(s)	914, 3878
AjnI	CCWGG	6 cut(s)	1337, 1752, 2230, 2301, 3094, 3427
AjuI	GAANNNNNNNTTGG	4 cut(s)	3818, 3850, 3865, 3897
Alw21I	GWGCWC	4 cut(s)	641, 649, 2875, 3626
Alw26I	GTCTC	7 cut(s)	893, 925, 1416, 2516, 2814, 3096, 3385
Alw44I	GTGCAC	1 cut(s)	637
Ama87I	CYCGRG	1 cut(s)	80
AoxI	GGCC	7 cut(s)	83, 464, 1486, 1596, 1913, 2752, 2833
ApaLI	GTGCAC	1 cut(s)	637
AscI	GGCGCGCC	1 cut(s)	146
Asp700I	GAANNNNTTC	1 cut(s)	3761
AspLEI	GCGC	3 cut(s)	111, 148, 150
AspS9I	GGNCC	7 cut(s)	83, 701, 1913, 2795, 3053, 3677, 3779
AsuII	TTCGAA	1 cut(s)	439
AvaI	CYCGRG	1 cut(s)	80
AvaII	GGWCC	5 cut(s)	701, 2795, 3053, 3677, 3779
BaeGI	GKGCMC	2 cut(s)	641, 2910
BalI	TGGCCA	2 cut(s)	466, 1598
BamHI	GGATCC	2 cut(s)	19, 1656
BanI	GGYRCC	1 cut(s)	2695
BanII	GRGCYC	1 cut(s)	3626
BauI	CACGAG	1 cut(s)	2829
BbrPI	CACGTG	1 cut(s)	11
BbsI	GAAGAC	6 cut(s)	1535, 1704, 2063, 2507, 3882, 3975
Bbv12I	GWGCWC	4 cut(s)	641, 649, 2875, 3626
BceAI	ACGGC	3 cut(s)	135, 496, 4027
BciT130I	CCWGG	6 cut(s)	1339, 1754, 2232, 2303, 3096, 3429
BclI	TGATCA	2 cut(s)	1365, 2767
BcoDI	GTCTC	7 cut(s)	893, 925, 1416, 2516, 2814, 3096, 3385
BcuI	ACTAGT	2 cut(s)	914, 3878
BfaI	CTAG	6 cut(s)	854, 915, 1385, 2132, 3681, 3879
BfmI	CTRYAG	5 cut(s)	1728, 2260, 2454, 3104, 3597
BfoI	RGCGCY	1 cut(s)	112
BfuAI	ACCTGC	2 cut(s)	1603, 3670
BglII	AGATCT	1 cut(s)	358
BlpI	GCTNAGC	1 cut(s)	3320
BmcAI	AGTACT	1 cut(s)	3221
Bme1390I	CCNGG	6 cut(s)	1339, 1754, 2232, 2303, 3096, 3429
Bme18I	GGWCC	5 cut(s)	701, 2795, 3053, 3677, 3779
BmeT110I	CYCGRG	1 cut(s)	80
BmgT120I	GGNCC	7 cut(s)	83, 701, 1913, 2795, 3053, 3677, 3779
BmiI	GGNNCC	6 cut(s)	21, 1658, 2697, 3054, 3764, 3859
BmrFI	CCNGG	6 cut(s)	1339, 1754, 2232, 2303, 3096, 3429
BmrI	ACTGGG	3 cut(s)	1920, 3055, 3132
BmuI	ACTGGG	3 cut(s)	1920, 3055, 3132
BpiI	GAAGAC	6 cut(s)	1535, 1704, 2063, 2507, 3882, 3975
BplI	GAGNNNNNCTC	2 cut(s)	395, 427
Bpu10I	CCTNAGC	1 cut(s)	2652
Bpu1102I	GCTNAGC	1 cut(s)	3320
Bpu14I	TTCGAA	1 cut(s)	439
BpuEI	CTTGAG	4 cut(s)	1040, 1046, 2577, 2635
Bsa29I	ATCGAT	1 cut(s)	792
BsaAI	YACGTR	3 cut(s)	11, 419, 788
BsaBI	GATNNNNATC	1 cut(s)	279
BsaI	GGTCTC	1 cut(s)	3385
BsaJI	CCNNGG	5 cut(s)	315, 1399, 1752, 2301, 3428
Bsc4I	CCNNNNNNNGG	9 cut(s)	14, 29, 92, 1405, 2849, 3050, 3548, 3776, 3941
Bse118I	RCCGGY	1 cut(s)	1915
Bse1I	ACTGG	8 cut(s)	455, 646, 1251, 1579, 1915, 2634, 3061, 3127
Bse3DI	GCAATG	5 cut(s)	674, 970, 2776, 3315, 3810
Bse8I	GATNNNNATC	1 cut(s)	279
BseBI	CCWGG	6 cut(s)	1339, 1754, 2232, 2303, 3096, 3429
BseCI	ATCGAT	1 cut(s)	792
BseDI	CCNNGG	5 cut(s)	315, 1399, 1752, 2301, 3428
BseJI	GATNNNNATC	1 cut(s)	279
BseLI	CCNNNNNNNGG	9 cut(s)	14, 29, 92, 1405, 2849, 3050, 3548, 3776, 3941
BseMI	GCAATG	5 cut(s)	674, 970, 2776, 3315, 3810
BseNI	ACTGG	8 cut(s)	455, 646, 1251, 1579, 1915, 2634, 3061, 3127
BsePI	GCGCGC	1 cut(s)	146
BseRI	GAGGAG	1 cut(s)	307
BseSI	GKGCMC	2 cut(s)	641, 2910
BseYI	CCCAGC	1 cut(s)	91
BsgI	GTGCAG	3 cut(s)	174, 3648, 3782
Bsh1236I	CGCG	2 cut(s)	148, 4081
Bsh1285I	CGRYCG	1 cut(s)	205
BshFI	GGCC	7 cut(s)	85, 466, 1488, 1598, 1915, 2754, 2835
BshNI	GGYRCC	1 cut(s)	2695
BshVI	ATCGAT	1 cut(s)	792
BsiEI	CGRYCG	1 cut(s)	205
BsiHKAI	GWGCWC	4 cut(s)	641, 649, 2875, 3626
BsiHKCI	CYCGRG	1 cut(s)	80
BsiSI	CCGG	3 cut(s)	114, 1916, 1988
BslFI	GGGAC	2 cut(s)	2624, 3259
BslI	CCNNNNNNNGG	9 cut(s)	14, 29, 92, 1405, 2849, 3050, 3548, 3776, 3941
BsmAI	GTCTC	7 cut(s)	893, 925, 1416, 2516, 2814, 3096, 3385
BsmFI	GGGAC	2 cut(s)	2624, 3259
BsmI	GAATGC	3 cut(s)	853, 1786, 3157
BsnI	GGCC	7 cut(s)	85, 466, 1488, 1598, 1915, 2754, 2835
Bso31I	GGTCTC	1 cut(s)	3385
BsoBI	CYCGRG	1 cut(s)	80
Bsp119I	TTCGAA	1 cut(s)	439
Bsp1286I	GDGCHC	5 cut(s)	641, 649, 2875, 2910, 3626
Bsp1720I	GCTNAGC	1 cut(s)	3320
BspANI	GGCC	7 cut(s)	85, 466, 1488, 1598, 1915, 2754, 2835
BspDI	ATCGAT	1 cut(s)	792
BspFNI	CGCG	2 cut(s)	148, 4081
BspHI	TCATGA	5 cut(s)	871, 1003, 1240, 1693, 2142
BspLI	GGNNCC	6 cut(s)	21, 1658, 2697, 3054, 3764, 3859
BspMAI	CTGCAG	2 cut(s)	1732, 3108
BspMI	ACCTGC	2 cut(s)	1603, 3670
BspT104I	TTCGAA	1 cut(s)	439
BspT107I	GGYRCC	1 cut(s)	2695
BspTNI	GGTCTC	1 cut(s)	3385
BsrDI	GCAATG	5 cut(s)	674, 970, 2776, 3315, 3810
BsrFI	RCCGGY	1 cut(s)	1915
BsrI	ACTGG	8 cut(s)	455, 646, 1251, 1579, 1915, 2634, 3061, 3127
BssAI	RCCGGY	1 cut(s)	1915
BssECI	CCNNGG	5 cut(s)	315, 1399, 1752, 2301, 3428
BssHII	GCGCGC	1 cut(s)	146
BssNAI	GTATAC	1 cut(s)	3752
BssSI	CACGAG	1 cut(s)	2829
BssT1I	CCWWGG	2 cut(s)	315, 1399
Bst1107I	GTATAC	1 cut(s)	3752
Bst2BI	CACGAG	1 cut(s)	2829
Bst2UI	CCWGG	6 cut(s)	1339, 1754, 2232, 2303, 3096, 3429
Bst4CI	ACNGT	7 cut(s)	718, 1666, 1975, 2762, 3090, 3466, 3488
Bst6I	CTCTTC	2 cut(s)	1470, 1852
BstAPI	GCANNNNNTGC	4 cut(s)	1997, 2570, 2663, 2955
BstBAI	YACGTR	3 cut(s)	11, 419, 788
BstBI	TTCGAA	1 cut(s)	439
BstEII	GGTNACC	1 cut(s)	3000
BstFNI	CGCG	2 cut(s)	148, 4081
BstH2I	RGCGCY	1 cut(s)	112
BstHHI	GCGC	3 cut(s)	111, 148, 150
BstMAI	GTCTC	7 cut(s)	893, 925, 1416, 2516, 2814, 3096, 3385
BstMCI	CGRYCG	1 cut(s)	205
BstNI	CCWGG	6 cut(s)	1339, 1754, 2232, 2303, 3096, 3429
BstNSI	RCATGY	7 cut(s)	392, 2269, 2543, 2949, 2958, 3025, 3934
BstPI	GGTNACC	1 cut(s)	3000
BstSCI	CCNGG	6 cut(s)	1337, 1752, 2230, 2301, 3094, 3427
BstSFI	CTRYAG	5 cut(s)	1728, 2260, 2454, 3104, 3597
BstSLI	GKGCMC	2 cut(s)	641, 2910
BstUI	CGCG	2 cut(s)	148, 4081
BstV2I	GAAGAC	6 cut(s)	1535, 1704, 2063, 2507, 3882, 3975
BstX2I	RGATCY	9 cut(s)	19, 358, 623, 968, 1388, 1656, 2020, 3642, 3650
BstXI	CCANNNNNNTGG	3 cut(s)	322, 1667, 2057
BstYI	RGATCY	9 cut(s)	19, 358, 623, 968, 1388, 1656, 2020, 3642, 3650
BstZ17I	GTATAC	1 cut(s)	3752
Bsu15I	ATCGAT	1 cut(s)	792
BsuRI	GGCC	7 cut(s)	85, 466, 1488, 1598, 1915, 2754, 2835
BsuTUI	ATCGAT	1 cut(s)	792
BtsI	GCAGTG	2 cut(s)	772, 3101
BtsIMutI	CAGTG	6 cut(s)	639, 663, 772, 1258, 3101, 3120
BveI	ACCTGC	2 cut(s)	1603, 3670
CciI	TCATGA	5 cut(s)	871, 1003, 1240, 1693, 2142
CfoI	GCGC	3 cut(s)	111, 148, 150
Cfr10I	RCCGGY	1 cut(s)	1915
Cfr13I	GGNCC	7 cut(s)	83, 701, 1913, 2795, 3053, 3677, 3779
ClaI	ATCGAT	1 cut(s)	792
CsiI	ACCWGGT	1 cut(s)	2230
Csp6I	GTAC	7 cut(s)	600, 1084, 2228, 2451, 3220, 3729, 3952
CviQI	GTAC	7 cut(s)	600, 1084, 2228, 2451, 3220, 3729, 3952
DraI	TTTAAA	2 cut(s)	2181, 4021
DraIII	CACNNNGTG	1 cut(s)	11
EaeI	YGGCCR	2 cut(s)	464, 1596
Eam1104I	CTCTTC	2 cut(s)	1470, 1852
EarI	CTCTTC	2 cut(s)	1470, 1852
EciI	GGCGGA	1 cut(s)	2076
Ecl136II	GAGCTC	1 cut(s)	3624
Eco130I	CCWWGG	2 cut(s)	315, 1399
Eco24I	GRGCYC	1 cut(s)	3626
Eco31I	GGTCTC	1 cut(s)	3385
Eco32I	GATATC	1 cut(s)	3425
Eco47I	GGWCC	5 cut(s)	701, 2795, 3053, 3677, 3779
Eco53kI	GAGCTC	1 cut(s)	3624
Eco57I	CTGAAG	2 cut(s)	453, 665
Eco72I	CACGTG	1 cut(s)	11
Eco88I	CYCGRG	1 cut(s)	80
Eco91I	GGTNACC	1 cut(s)	3000
EcoICRI	GAGCTC	1 cut(s)	3624
EcoO109I	RGGNCCY	1 cut(s)	3677
EcoO65I	GGTNACC	1 cut(s)	3000
EcoRI	GAATTC	2 cut(s)	1057, 2920
EcoRII	CCWGG	6 cut(s)	1337, 1752, 2230, 2301, 3094, 3427
EcoRV	GATATC	1 cut(s)	3425
EcoT14I	CCWWGG	2 cut(s)	315, 1399
EcoT22I	ATGCAT	6 cut(s)	1228, 1594, 1708, 2002, 2778, 3315
EcoT38I	GRGCYC	1 cut(s)	3626
ErhI	CCWWGG	2 cut(s)	315, 1399
FalI	AAGNNNNNCTT	4 cut(s)	3380, 3412, 3750, 3782
FaqI	GGGAC	2 cut(s)	2624, 3259
FauI	CCCGC	4 cut(s)	22, 110, 385, 667
FbaI	TGATCA	2 cut(s)	1365, 2767
FblI	GTMKAC	1 cut(s)	3751
FriOI	GRGCYC	1 cut(s)	3626
FspBI	CTAG	6 cut(s)	854, 915, 1385, 2132, 3681, 3879
GlaI	GCGC	3 cut(s)	110, 147, 149
GsaI	CCCAGC	1 cut(s)	95
HaeII	RGCGCY	1 cut(s)	112
HaeIII	GGCC	7 cut(s)	85, 466, 1488, 1598, 1915, 2754, 2835
HapII	CCGG	3 cut(s)	114, 1916, 1988
HhaI	GCGC	3 cut(s)	111, 148, 150
Hin6I	GCGC	3 cut(s)	109, 146, 148
HinP1I	GCGC	3 cut(s)	109, 146, 148
HincII	GTYRAC	3 cut(s)	910, 1293, 2106
HindII	GTYRAC	3 cut(s)	910, 1293, 2106
HpaI	GTTAAC	1 cut(s)	910
HpaII	CCGG	3 cut(s)	114, 1916, 1988
Hpy166II	GTNNAC	8 cut(s)	639, 910, 1293, 2106, 2237, 2254, 3228, 3752
Hpy8I	GTNNAC	8 cut(s)	639, 910, 1293, 2106, 2237, 2254, 3228, 3752
Hpy99I	CGWCG	2 cut(s)	200, 203
HpyCH4III	ACNGT	7 cut(s)	718, 1666, 1975, 2762, 3090, 3466, 3488
HpyCH4IV	ACGT	4 cut(s)	10, 418, 787, 3238
HpySE526I	ACGT	4 cut(s)	10, 418, 787, 3238
HspAI	GCGC	3 cut(s)	109, 146, 148
Ksp22I	TGATCA	2 cut(s)	1365, 2767
KspAI	GTTAAC	1 cut(s)	910
LmnI	GCTCC	8 cut(s)	116, 166, 541, 2303, 2316, 2584, 3160, 4027
MabI	ACCWGGT	1 cut(s)	2230
MaeI	CTAG	6 cut(s)	854, 915, 1385, 2132, 3681, 3879
MaeII	ACGT	4 cut(s)	10, 418, 787, 3238
MaeIII	GTNAC	5 cut(s)	767, 943, 3000, 3131, 3239
MfeI	CAATTG	2 cut(s)	1042, 1563
MflI	RGATCY	9 cut(s)	19, 358, 623, 968, 1388, 1656, 2020, 3642, 3650
MhlI	GDGCHC	5 cut(s)	641, 649, 2875, 2910, 3626
MlsI	TGGCCA	2 cut(s)	466, 1598
MluNI	TGGCCA	2 cut(s)	466, 1598
MlyI	GAGTC	5 cut(s)	877, 987, 1121, 2518, 3896
MmeI	TCCRAC	6 cut(s)	477, 601, 1028, 1446, 2728, 3566
Mox20I	TGGCCA	2 cut(s)	466, 1598
Mph1103I	ATGCAT	6 cut(s)	1228, 1594, 1708, 2002, 2778, 3315
MroXI	GAANNNNTTC	1 cut(s)	3761
MscI	TGGCCA	2 cut(s)	466, 1598
MseI	TTAA	8 cut(s)	288, 609, 909, 1878, 2180, 2327, 3359, 4020
MslI	CAYNNNNRTG	3 cut(s)	939, 1008, 2468
Msp20I	TGGCCA	2 cut(s)	466, 1598
MspA1I	CMGCKG	4 cut(s)	71, 91, 3796, 3920
MspI	CCGG	3 cut(s)	114, 1916, 1988
MspR9I	CCNGG	6 cut(s)	1339, 1754, 2232, 2303, 3096, 3429
MunI	CAATTG	2 cut(s)	1042, 1563
Mva1269I	GAATGC	3 cut(s)	853, 1786, 3157
MvaI	CCWGG	6 cut(s)	1339, 1754, 2232, 2303, 3096, 3429
MvnI	CGCG	2 cut(s)	148, 4081
NlaIV	GGNNCC	6 cut(s)	21, 1658, 2697, 3054, 3764, 3859
NmeAIII	GCCGAG	1 cut(s)	122
NmuCI	GTSAC	4 cut(s)	767, 943, 3000, 3131
NsiI	ATGCAT	6 cut(s)	1228, 1594, 1708, 2002, 2778, 3315
NspI	RCATGY	7 cut(s)	392, 2269, 2543, 2949, 2958, 3025, 3934
NspV	TTCGAA	1 cut(s)	439
PaeI	GCATGC	3 cut(s)	2269, 2949, 3934
PagI	TCATGA	5 cut(s)	871, 1003, 1240, 1693, 2142
PalAI	GGCGCGCC	1 cut(s)	146
PaqCI	CACCTGC	1 cut(s)	3670
PauI	GCGCGC	1 cut(s)	146
PcsI	WCGNNNNNNNCGW	2 cut(s)	207, 1282
PctI	GAATGC	3 cut(s)	853, 1786, 3157
PdmI	GAANNNNTTC	1 cut(s)	3761
PfeI	GAWTC	9 cut(s)	76, 207, 344, 885, 1349, 2362, 3040, 3145, 3469
PflMI	CCANNNNNTGG	1 cut(s)	3548
Ple19I	CGATCG	1 cut(s)	205
PleI	GAGTC	5 cut(s)	876, 986, 1120, 2518, 3895
PmaCI	CACGTG	1 cut(s)	11
PmlI	CACGTG	1 cut(s)	11
PpsI	GAGTC	5 cut(s)	876, 986, 1120, 2518, 3895
Ppu21I	YACGTR	3 cut(s)	11, 419, 788
PpuMI	RGGWCCY	1 cut(s)	3677
PsiI	TTATAA	2 cut(s)	3036, 3450
Psp124BI	GAGCTC	1 cut(s)	3626
Psp5II	RGGWCCY	1 cut(s)	3677
Psp6I	CCWGG	6 cut(s)	1337, 1752, 2230, 2301, 3094, 3427
PspCI	CACGTG	1 cut(s)	11
PspEI	GGTNACC	1 cut(s)	3000
PspFI	CCCAGC	1 cut(s)	91
PspGI	CCWGG	6 cut(s)	1337, 1752, 2230, 2301, 3094, 3427
PspN4I	GGNNCC	6 cut(s)	21, 1658, 2697, 3054, 3764, 3859
PspPI	GGNCC	7 cut(s)	83, 701, 1913, 2795, 3053, 3677, 3779
PspPPI	RGGWCCY	1 cut(s)	3677
PsrI	GAACNNNNNNTAC	2 cut(s)	420, 452
PstI	CTGCAG	2 cut(s)	1732, 3108
PsuI	RGATCY	9 cut(s)	19, 358, 623, 968, 1388, 1656, 2020, 3642, 3650
PteI	GCGCGC	1 cut(s)	146
PvuI	CGATCG	1 cut(s)	205
PvuII	CAGCTG	3 cut(s)	71, 91, 3920
RsaI	GTAC	7 cut(s)	601, 1085, 2229, 2452, 3221, 3730, 3953
RsaNI	GTAC	7 cut(s)	600, 1084, 2228, 2451, 3220, 3729, 3952
RseI	CAYNNNNRTG	3 cut(s)	939, 1008, 2468
SacI	GAGCTC	1 cut(s)	3626
SaqAI	TTAA	8 cut(s)	288, 609, 909, 1878, 2180, 2327, 3359, 4020
Sau96I	GGNCC	7 cut(s)	83, 701, 1913, 2795, 3053, 3677, 3779
ScaI	AGTACT	1 cut(s)	3221
SchI	GAGTC	5 cut(s)	877, 987, 1121, 2518, 3896
ScrFI	CCNGG	6 cut(s)	1339, 1754, 2232, 2303, 3096, 3429
SduI	GDGCHC	5 cut(s)	641, 649, 2875, 2910, 3626
SexAI	ACCWGGT	1 cut(s)	2230
SfcI	CTRYAG	5 cut(s)	1728, 2260, 2454, 3104, 3597
SfuI	TTCGAA	1 cut(s)	439
SgsI	GGCGCGCC	1 cut(s)	146
SinI	GGWCC	5 cut(s)	701, 2795, 3053, 3677, 3779
SmiMI	CAYNNNNRTG	3 cut(s)	939, 1008, 2468
SmlI	CTYRAG	4 cut(s)	1019, 1025, 2592, 2614
SmoI	CTYRAG	4 cut(s)	1019, 1025, 2592, 2614
SpeI	ACTAGT	2 cut(s)	914, 3878
SphI	GCATGC	3 cut(s)	2269, 2949, 3934
SspMI	CTAG	6 cut(s)	854, 915, 1385, 2132, 3681, 3879
SstI	GAGCTC	1 cut(s)	3626
StyD4I	CCNGG	6 cut(s)	1337, 1752, 2230, 2301, 3094, 3427
StyI	CCWWGG	2 cut(s)	315, 1399
TaaI	ACNGT	7 cut(s)	718, 1666, 1975, 2762, 3090, 3466, 3488
TaiI	ACGT	4 cut(s)	13, 421, 790, 3241
TaqII	GACCGA	2 cut(s)	54, 1343
TatI	WGTACW	1 cut(s)	3219
TauI	GCSGC	3 cut(s)	88, 1556, 4042
TfiI	GAWTC	9 cut(s)	76, 207, 344, 885, 1349, 2362, 3040, 3145, 3469
Tru1I	TTAA	8 cut(s)	288, 609, 909, 1878, 2180, 2327, 3359, 4020
Tru9I	TTAA	8 cut(s)	288, 609, 909, 1878, 2180, 2327, 3359, 4020
TscAI	CASTG	6 cut(s)	646, 670, 772, 1258, 3108, 3127
TseFI	GTSAC	4 cut(s)	767, 943, 3000, 3131
Tsp45I	GTSAC	4 cut(s)	767, 943, 3000, 3131
TspGWI	ACGGA	1 cut(s)	2704
TspRI	CASTG	6 cut(s)	646, 670, 772, 1258, 3108, 3127
Van91I	CCANNNNNTGG	1 cut(s)	3548
VneI	GTGCAC	1 cut(s)	637
VpaK11BI	GGWCC	5 cut(s)	701, 2795, 3053, 3677, 3779
XceI	RCATGY	7 cut(s)	392, 2269, 2543, 2949, 2958, 3025, 3934
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1760
XmiI	GTMKAC	1 cut(s)	3751
XmnI	GAANNNNTTC	1 cut(s)	3761
XspI	CTAG	6 cut(s)	854, 915, 1385, 2132, 3681, 3879
ZrmI	AGTACT	1 cut(s)	3221
Zsp2I	ATGCAT	6 cut(s)	1228, 1594, 1708, 2002, 2778, 3315

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.