Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0007430

Physical Location & Seq

Genomic Coordinates Reverse (-)

3404581 .. 3409694

Gene Structure 5114 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g05860.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2307 bp

ATGGACATCAGCGAAGAAGTCAGGGCGGCTCACCGCCGTGAGCTCACTACCTTCTTGGAAGACGGAACGTACATGGACGACATCAAGGCCGTCCTCAACCGCAAGGACCGCCGCCTCATAGTCAACATCTCCGATCTCCACTCCTACAGCGACCTCGGCAACAGGATTCTGAGAAATCCGAGTGATTATATGCAAGCGTTCAACGATGCGGCGACGGAAGTGGCGAGCAAGATCGATCCGAAGTACTTGAAGTCCGGGGAACAGCTTCACGTAGGGTTTAATGGCCCCTTTGTATCGCGCGGCATCACGCCGAGAGATCTGCTCTCTGAGTACATTGGTTCCATGGTTTCGGTTCGCGGCATTGTCACCAAATGTTCTCTTGTGAGGCCGAAAGTTGTTAAGAGTGTACATTTTTGCCCTACAACCGGAAATTTTATGACTCGTGAGTATCGAGACATTACATCCAACATGGGTTTGCCGACAGGAACAGTTTATCCCACCAGGGATGACAATGGCAATTTATTGGTAACTGAGTATGGATTGTGCAAATACAAAGATCATCAGACTTTGTCGATGCAAGAAGTGCCTGAGAACTCTGCTCCTGGTCAGCTTCCTCGAACAGTGGATGTCATAGTTGAGGATGACCTGGTAGATAAGTGCAAACCAGGAGACCGTGTGGCTGTTGTAGGGATTTACAAGGCTCTTCCTGGTAAAAGCAAGGGAAGCGTGAATGGAGTATTCAGGACGGTTCTCATAGCTAACAATGTCACTCAGCTCAACAAAGAGGCCCAATCGCCACAGTACAATGCTGAAGACCTGACAAATATAAAAAAGATAGCAGAGAGAGATGATGCATTTGACCTGCTCGGCAATTCACTCGCACCTTCGATTTATGGACATTCATGGATAAAGAAAGCAGTGATACTATTAATGCTTGGGGGAGTAGAAAAGAACTTAAAGAATGGCACCCACTTACGTGGTGACATTAACATGATGATGGTTGGTGATCCTTCTGTTGCCAAGTCTCAACTTTTAAGAGCTATTATGAATATTGCTCCGTTGGCAATATCAACTACTGGCCGGGGTTCTTCGGGTGTTGGTTTGACAGCTGCTGTTACATCAGATCAAGAGACAGGAGAGAGAAGGCTAGAAGCTGGTGCCATGGTTCTTGCTGATCGCGGTGTTGTCTGTATTGATGAATTTGACAAAATGAATGATCAAGATCGTGTTGCCATACATGAAGTTATGGAACAGCAGACTGTCACTATTGCCAAAGCTGGAATCCATGCATCTCTCAATGCCCGGTGCAGTGTGGTGGCTGCCGCAAATCCCATATATGGTTCTTATGATCGTTCATTGACACCAACAAAGAATATCGGACTTCCAGACTCTTTGCTTTCTCGTTTTGATTTGCTTTTTATTGTATTGGATCAAATGGATCCTGATATTGACCGTCAAGTCTCAGAGCATGTACTGCGTATGCATCGGTATCGTTCTGCATCTGGAGGTGAAGCAATGCTTGATGCGAACTCAGGATATGGAGGAGAAGATGAAATGGATAACGACACCACTGTATTTGTCAAGTATAACCGAATGCTTCATGGAAAGAAAACATCTAGGGGTCAGAAGCGTGATACTCTTACAATCAAGTTTCTAAAGAAGTACATTCATTATGCCAAGCATAGGATTCAGCCTGATCTGACTGATGAGGCATCTGAACAAATTGCGACAGCATATGCAGAACTCAGAGATGCCAGTTCAAATGCAAAGACTGGAGGAACACTTCCGATAACTGCCAGAACCTTAGAAACAATTATTCGTCTCTCAACTGCTCATGCGAAATTGAAGTTGAGCAGAAAGGTTACAAAATCTGATGTTGATGCTGCCCTTCAAGTTTTAAACTTCGCAATATATCACAAGGAGTTGACTGACATGGAGGAAAGGGAGCATGAACAAGAAATGGAGAGGAACGGCAGAGATGCTCATCATTCGGGTGAAAATGATGGGTCTCGCAATAGAACCACTAACAGAGATGGTGCAACAATTGATCCGATGGAAATAGATGACCCTCCCACACAGACTGCTGCTAATATTTCTTCTGATAGAAAAGAAGCATTTAATTCTCTATTTGGTGGGCATATGCGAGAAAAGCGCTTGGATAGCATATCTGTTGAGGAGATTGAGATGGCTGTCAATGAAAGAGCAGATTCCCCTTACTCAAGGGCGGAGATAATAGTCCTATTAGAGAAACTTCAAGAGGATAACAGAGTGATGATAGCTGATGGAACGGTTGTTATGATCTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000347 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006268 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0016043 GO:0032392 GO:0032508 GO:0032991 GO:0034641 GO:0034645 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0051276 GO:0071103 GO:0071704 GO:0071840 GO:0090304 GO:1901360 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko03030 ko04110 ko04111 ko04113 map03030 map04110 map04111 map04113

Pfam Domains

Protein Families

MCM MCM_N MCM_OB

Protein Analysis

769

Amino Acids

85.08

Weight (kDa)

5.92

Isoelectric Point (pI)

30.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MCM_N	PF14551	16 - 94	4.5e-13	MCM N-terminal domain
MCM_OB	PF17207	105 - 235	6.3e-31	MCM OB domain
MCM	PF00493	273 - 495	2.9e-96	MCM P-loop domain
Mg_chelatase	PF01078	379 - 446	3.5e-07	Magnesium chelatase, subunit ChlI
MCM_lid	PF17855	551 - 634	2.1e-26	MCM AAA-lid domain
WHD_MCM3_C	PF23191	697 - 767	2.4e-13	MCM3-like, winged helix domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007430)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G46280 AT5G46280 AT5G46280 AT5G46280
fragaria_vesca	FvH4_3g05860
malus_domestica	MD05G1286600.v1.1 MD10G1264100.v1.1
prunus_persica	Prupe.4G078300_v2.0.a1
pyrus_communis	pycom10g22020
rosa_chinensis	RchiOBHm_Chr5g0013601 RchiOBHm_Chr5g0013661
rosa_laevigata	RLG00000032038
rosa_multiflora	Rmu_sc0002573.1_g000006 Rmu_sc0002573.1_g000015
rosa_roxburghii	Rroxscaffold_1G00062940
rosa_rugosa	Rorug05G0011700 Rorug05G0011800
rosa_samantha	Rh5AG106100 Rh5AG106300 Rh5BG102500 Rh5CG114000 Rh5CG114400 Rh5DG100800 Rh5DG101200
rosa_wichuraiana	Rw5G009270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1457
Acc36I	ACCTGC	1 cut(s)	870
AccB1I	GGYRCC	2 cut(s)	965, 1157
AccII	CGCG	4 cut(s)	298, 300, 357, 1179
AclWI	GGATC	6 cut(s)	230, 1001, 1433, 1437, 1446, 2042
AcoI	YGGCCR	1 cut(s)	1078
AcsI	RAATTY	2 cut(s)	430, 1199
AcuI	CTGAAG	1 cut(s)	831
AfaI	GTAC	7 cut(s)	71, 245, 332, 408, 803, 1473, 1664
AfeI	AGCGCT	1 cut(s)	2153
AfiI	CCNNNNNNNGG	3 cut(s)	425, 1337, 1683
AgsI	TTSAA	6 cut(s)	202, 250, 1761, 1846, 1892, 2255
AjnI	CCWGG	5 cut(s)	500, 601, 645, 664, 706
AleI	CACNNNNGTG	2 cut(s)	36, 975
AloI	GAACNNNNNNTCC	2 cut(s)	478, 510
Alw21I	GWGCWC	1 cut(s)	45
Alw26I	GTCTC	7 cut(s)	447, 663, 1029, 1124, 1465, 1826, 2013
AlwI	GGATC	6 cut(s)	230, 1001, 1433, 1437, 1446, 2042
AlwNI	CAGNNNCTG	1 cut(s)	1112
Aor51HI	AGCGCT	1 cut(s)	2153
AoxI	GGCC	5 cut(s)	87, 283, 386, 786, 1078
ApeKI	GCWGC	4 cut(s)	1109, 1319, 1883, 2084
ApoI	RAATTY	2 cut(s)	430, 1199
AseI	ATTAAT	1 cut(s)	929
Asp700I	GAANNNNTTC	1 cut(s)	264
AspLEI	GCGC	2 cut(s)	300, 2154
AspS9I	GGNCC	3 cut(s)	106, 284, 787
AsuC2I	CCSGG	3 cut(s)	256, 1082, 1303
AsuHPI	GGTGA	6 cut(s)	23, 358, 992, 1016, 1520, 2006
AvaII	GGWCC	1 cut(s)	106
BamHI	GGATCC	1 cut(s)	1438
BanI	GGYRCC	2 cut(s)	965, 1157
BanII	GRGCYC	1 cut(s)	45
BauI	CACGAG	1 cut(s)	441
BbsI	GAAGAC	2 cut(s)	66, 819
Bbv12I	GWGCWC	1 cut(s)	45
BbvI	GCAGC	4 cut(s)	1096, 1306, 1870, 2071
BccI	CCATC	6 cut(s)	991, 1997, 2027, 2047, 2179, 2276
BceAI	ACGGC	3 cut(s)	21, 74, 1987
BcgI	CGANNNNNNTGC	6 cut(s)	301, 335, 859, 893, 1472, 1506
BciT130I	CCWGG	5 cut(s)	502, 603, 647, 666, 708
BclI	TGATCA	1 cut(s)	1216
BcnI	CCSGG	3 cut(s)	256, 1082, 1303
BcoDI	GTCTC	7 cut(s)	447, 663, 1029, 1124, 1465, 1826, 2013
BfaI	CTAG	2 cut(s)	1148, 1617
BfmI	CTRYAG	1 cut(s)	145
BfoI	RGCGCY	1 cut(s)	2155
BfuAI	ACCTGC	1 cut(s)	870
BglII	AGATCT	1 cut(s)	316
BmcAI	AGTACT	1 cut(s)	245
Bme1390I	CCNGG	8 cut(s)	256, 502, 603, 647, 666, 708, 1082, 1303
Bme18I	GGWCC	1 cut(s)	106
BmgT120I	GGNCC	3 cut(s)	106, 284, 787
BmiI	GGNNCC	5 cut(s)	286, 340, 967, 1159, 1440
BmrFI	CCNGG	8 cut(s)	256, 502, 603, 647, 666, 708, 1082, 1303
BpiI	GAAGAC	2 cut(s)	66, 819
BplI	GAGNNNNNCTC	2 cut(s)	306, 338
BpmI	CTGGAG	2 cut(s)	1524, 1794
BpuEI	CTTGAG	1 cut(s)	2203
BpuMI	CCSGG	3 cut(s)	256, 1082, 1303
Bsa29I	ATCGAT	1 cut(s)	234
BsaAI	YACGTR	2 cut(s)	271, 977
BsaBI	GATNNNNATC	2 cut(s)	1221, 1983
BsaI	GGTCTC	2 cut(s)	663, 2013
BsaJI	CCNNGG	6 cut(s)	154, 255, 342, 501, 1081, 1161
BsaWI	WCCGGW	1 cut(s)	425
BsaXI	ACNNNNNCTCC	2 cut(s)	660, 690
Bsc4I	CCNNNNNNNGG	3 cut(s)	425, 1337, 1683
Bse1I	ACTGG	3 cut(s)	1081, 1755, 1777
Bse3DI	GCAATG	1 cut(s)	1521
Bse8I	GATNNNNATC	2 cut(s)	1221, 1983
BseBI	CCWGG	5 cut(s)	502, 603, 647, 666, 708
BseCI	ATCGAT	1 cut(s)	234
BseDI	CCNNGG	6 cut(s)	154, 255, 342, 501, 1081, 1161
BseGI	GGATG	4 cut(s)	461, 511, 631, 646
BseJI	GATNNNNATC	2 cut(s)	1221, 1983
BseLI	CCNNNNNNNGG	3 cut(s)	425, 1337, 1683
BseMI	GCAATG	1 cut(s)	1521
BseMII	CTCAG	8 cut(s)	161, 318, 522, 579, 785, 1476, 1545, 1759
BseNI	ACTGG	3 cut(s)	1081, 1755, 1777
BseRI	GAGGAG	2 cut(s)	1557, 2189
BseXI	GCAGC	4 cut(s)	1096, 1306, 1870, 2071
BsgI	GTGCAG	1 cut(s)	1327
Bsh1236I	CGCG	4 cut(s)	298, 300, 357, 1179
BshFI	GGCC	5 cut(s)	89, 285, 388, 788, 1080
BshNI	GGYRCC	2 cut(s)	965, 1157
BshVI	ATCGAT	1 cut(s)	234
BsiHKAI	GWGCWC	1 cut(s)	45
BsiSI	CCGG	4 cut(s)	255, 426, 1081, 1303
BslI	CCNNNNNNNGG	3 cut(s)	425, 1337, 1683
BsmAI	GTCTC	7 cut(s)	447, 663, 1029, 1124, 1465, 1826, 2013
BsmBI	CGTCTC	1 cut(s)	1826
BsmI	GAATGC	1 cut(s)	1599
BsnI	GGCC	5 cut(s)	89, 285, 388, 788, 1080
Bso31I	GGTCTC	2 cut(s)	663, 2013
Bsp1286I	GDGCHC	1 cut(s)	45
Bsp1407I	TGTACA	1 cut(s)	406
Bsp19I	CCATGG	2 cut(s)	342, 1161
BspANI	GGCC	5 cut(s)	89, 285, 388, 788, 1080
BspCNI	CTCAG	8 cut(s)	162, 319, 523, 580, 784, 1475, 1544, 1758
BspDI	ATCGAT	1 cut(s)	234
BspFNI	CGCG	4 cut(s)	298, 300, 357, 1179
BspHI	TCATGA	1 cut(s)	2303
BspLI	GGNNCC	5 cut(s)	286, 340, 967, 1159, 1440
BspMI	ACCTGC	1 cut(s)	870
BspPI	GGATC	6 cut(s)	230, 1001, 1433, 1437, 1446, 2042
BspQI	GCTCTTC	1 cut(s)	708
BspT107I	GGYRCC	2 cut(s)	965, 1157
BspTNI	GGTCTC	2 cut(s)	663, 2013
BsrDI	GCAATG	1 cut(s)	1521
BsrGI	TGTACA	1 cut(s)	406
BsrI	ACTGG	3 cut(s)	1081, 1755, 1777
BssECI	CCNNGG	6 cut(s)	154, 255, 342, 501, 1081, 1161
BssSI	CACGAG	1 cut(s)	441
BssT1I	CCWWGG	2 cut(s)	342, 1161
Bst2BI	CACGAG	1 cut(s)	441
Bst2UI	CCWGG	5 cut(s)	502, 603, 647, 666, 708
Bst4CI	ACNGT	9 cut(s)	490, 622, 674, 748, 801, 1261, 1454, 1573, 2290
Bst6I	CTCTTC	1 cut(s)	708
BstAPI	GCANNNNNTGC	2 cut(s)	583, 1474
BstAUI	TGTACA	1 cut(s)	406
BstBAI	YACGTR	2 cut(s)	271, 977
BstC8I	GCNNGC	2 cut(s)	195, 226
BstDEI	CTNAG	9 cut(s)	170, 327, 531, 588, 771, 1462, 1531, 1745, 1804
BstDSI	CCRYGG	2 cut(s)	342, 1161
BstF5I	GGATG	4 cut(s)	461, 511, 631, 646
BstFNI	CGCG	4 cut(s)	298, 300, 357, 1179
BstH2I	RGCGCY	1 cut(s)	2155
BstHHI	GCGC	2 cut(s)	300, 2154
BstMAI	GTCTC	7 cut(s)	447, 663, 1029, 1124, 1465, 1826, 2013
BstMWI	GCNNNNNNNGC	8 cut(s)	108, 156, 583, 723, 1061, 1474, 2149, 2160
BstNI	CCWGG	5 cut(s)	502, 603, 647, 666, 708
BstNSI	RCATGY	1 cut(s)	1472
BstSCI	CCNGG	8 cut(s)	254, 500, 601, 645, 664, 706, 1080, 1301
BstSFI	CTRYAG	1 cut(s)	145
BstUI	CGCG	4 cut(s)	298, 300, 357, 1179
BstV1I	GCAGC	4 cut(s)	1096, 1306, 1870, 2071
BstV2I	GAAGAC	2 cut(s)	66, 819
BstX2I	RGATCY	2 cut(s)	316, 1438
BstXI	CCANNNNNNTGG	1 cut(s)	977
BstYI	RGATCY	2 cut(s)	316, 1438
Bsu15I	ATCGAT	1 cut(s)	234
BsuRI	GGCC	5 cut(s)	89, 285, 388, 788, 1080
BsuTUI	ATCGAT	1 cut(s)	234
BtgI	CCRYGG	2 cut(s)	342, 1161
BtsCI	GGATG	4 cut(s)	461, 511, 631, 646
BtsI	GCAGTG	2 cut(s)	924, 1315
BtsIMutI	CAGTG	4 cut(s)	627, 924, 1315, 1569
BveI	ACCTGC	1 cut(s)	870
Cac8I	GCNNGC	2 cut(s)	195, 226
CaiI	CAGNNNCTG	1 cut(s)	1112
CciI	TCATGA	1 cut(s)	2303
CfoI	GCGC	2 cut(s)	300, 2154
Cfr13I	GGNCC	3 cut(s)	106, 284, 787
ClaI	ATCGAT	1 cut(s)	234
CsiI	ACCWGGT	1 cut(s)	645
Csp6I	GTAC	7 cut(s)	70, 244, 331, 407, 802, 1472, 1663
CspCI	CAANNNNNGTGG	2 cut(s)	1558, 1593
CviQI	GTAC	7 cut(s)	70, 244, 331, 407, 802, 1472, 1663
DdeI	CTNAG	9 cut(s)	170, 327, 531, 588, 771, 1462, 1531, 1745, 1804
DraI	TTTAAA	1 cut(s)	1899
DrdI	GACNNNNNNGTC	1 cut(s)	1457
DseDI	GACNNNNNNGTC	1 cut(s)	1457
EaeI	YGGCCR	1 cut(s)	1078
Eam1104I	CTCTTC	1 cut(s)	708
EarI	CTCTTC	1 cut(s)	708
EciI	GGCGGA	1 cut(s)	2240
Ecl136II	GAGCTC	1 cut(s)	43
Eco130I	CCWWGG	2 cut(s)	342, 1161
Eco24I	GRGCYC	1 cut(s)	45
Eco31I	GGTCTC	2 cut(s)	663, 2013
Eco47I	GGWCC	1 cut(s)	106
Eco47III	AGCGCT	1 cut(s)	2153
Eco53kI	GAGCTC	1 cut(s)	43
Eco57I	CTGAAG	1 cut(s)	831
EcoICRI	GAGCTC	1 cut(s)	43
EcoRII	CCWGG	5 cut(s)	500, 601, 645, 664, 706
EcoT14I	CCWWGG	2 cut(s)	342, 1161
EcoT22I	ATGCAT	3 cut(s)	856, 1291, 1485
EcoT38I	GRGCYC	1 cut(s)	45
ErhI	CCWWGG	2 cut(s)	342, 1161
Esp3I	CGTCTC	1 cut(s)	1826
FalI	AAGNNNNNCTT	2 cut(s)	1503, 1535
FauNDI	CATATG	2 cut(s)	1735, 2139
FbaI	TGATCA	1 cut(s)	1216
FokI	GGATG	4 cut(s)	448, 518, 638, 653
FriOI	GRGCYC	1 cut(s)	45
FspBI	CTAG	2 cut(s)	1148, 1617
GlaI	GCGC	2 cut(s)	299, 2153
GsuI	CTGGAG	2 cut(s)	1524, 1794
HaeII	RGCGCY	1 cut(s)	2155
HaeIII	GGCC	5 cut(s)	89, 285, 388, 788, 1080
HapII	CCGG	4 cut(s)	255, 426, 1081, 1303
HhaI	GCGC	2 cut(s)	300, 2154
Hin6I	GCGC	2 cut(s)	298, 2152
HinP1I	GCGC	2 cut(s)	298, 2152
HincII	GTYRAC	2 cut(s)	124, 1926
HindII	GTYRAC	2 cut(s)	124, 1926
HinfI	GANTC	6 cut(s)	166, 439, 1281, 1388, 1687, 2207
HpaII	CCGG	4 cut(s)	255, 426, 1081, 1303
HphI	GGTGA	6 cut(s)	23, 358, 992, 1016, 1520, 2006
Hpy166II	GTNNAC	3 cut(s)	124, 407, 1926
Hpy8I	GTNNAC	3 cut(s)	124, 407, 1926
Hpy99I	CGWCG	1 cut(s)	217
HpyAV	CCTTC	5 cut(s)	61, 894, 1020, 1137, 1898
HpyCH4III	ACNGT	9 cut(s)	490, 622, 674, 748, 801, 1261, 1454, 1573, 2290
HpyCH4IV	ACGT	3 cut(s)	68, 270, 976
HpyF10VI	GCNNNNNNNGC	8 cut(s)	108, 156, 583, 723, 1061, 1474, 2149, 2160
HpyF3I	CTNAG	9 cut(s)	170, 327, 531, 588, 771, 1462, 1531, 1745, 1804
HpySE526I	ACGT	3 cut(s)	68, 270, 976
HspAI	GCGC	2 cut(s)	298, 2152
Ksp22I	TGATCA	1 cut(s)	1216
LguI	GCTCTTC	1 cut(s)	708
LmnI	GCTCC	3 cut(s)	604, 1060, 1945
Lsp1109I	GCAGC	4 cut(s)	1096, 1306, 1870, 2071
MabI	ACCWGGT	1 cut(s)	645
MaeI	CTAG	2 cut(s)	1148, 1617
MaeII	ACGT	3 cut(s)	68, 270, 976
MaeIII	GTNAC	7 cut(s)	364, 526, 766, 980, 1114, 1261, 1861
MboII	GAAGA	7 cut(s)	26, 71, 695, 824, 1080, 1559, 2088
MfeI	CAATTG	1 cut(s)	2043
MflI	RGATCY	2 cut(s)	316, 1438
MhlI	GDGCHC	1 cut(s)	45
MluCI	AATT	9 cut(s)	430, 517, 871, 1199, 1722, 1812, 1841, 2043, 2119
MlyI	GAGTC	2 cut(s)	433, 1382
MmeI	TCCRAC	1 cut(s)	489
Mph1103I	ATGCAT	3 cut(s)	856, 1291, 1485
MroXI	GAANNNNTTC	1 cut(s)	264
MseI	TTAA	8 cut(s)	279, 399, 929, 956, 987, 1034, 1898, 2118
MslI	CAYNNNNRTG	5 cut(s)	36, 975, 989, 995, 1992
MspA1I	CMGCKG	1 cut(s)	1109
MspI	CCGG	4 cut(s)	255, 426, 1081, 1303
MspR9I	CCNGG	8 cut(s)	256, 502, 603, 647, 666, 708, 1082, 1303
MunI	CAATTG	1 cut(s)	2043
Mva1269I	GAATGC	1 cut(s)	1599
MvaI	CCWGG	5 cut(s)	502, 603, 647, 666, 708
MvnI	CGCG	4 cut(s)	298, 300, 357, 1179
MwoI	GCNNNNNNNGC	8 cut(s)	108, 156, 583, 723, 1061, 1474, 2149, 2160
NciI	CCSGG	3 cut(s)	256, 1082, 1303
NcoI	CCATGG	2 cut(s)	342, 1161
NdeI	CATATG	2 cut(s)	1735, 2139
NlaIV	GGNNCC	5 cut(s)	286, 340, 967, 1159, 1440
NmeAIII	GCCGAG	3 cut(s)	135, 336, 846
NmuCI	GTSAC	4 cut(s)	364, 766, 980, 1261
NsiI	ATGCAT	3 cut(s)	856, 1291, 1485
NspI	RCATGY	1 cut(s)	1472
OliI	CACNNNNGTG	2 cut(s)	36, 975
PagI	TCATGA	1 cut(s)	2303
PciSI	GCTCTTC	1 cut(s)	708
PcsI	WCGNNNNNNNCGW	2 cut(s)	221, 448
PctI	GAATGC	1 cut(s)	1599
PdmI	GAANNNNTTC	1 cut(s)	264
PfeI	GAWTC	4 cut(s)	166, 1281, 1687, 2207
PflFI	GACNNNGTC	1 cut(s)	568
PleI	GAGTC	2 cut(s)	433, 1382
PpsI	GAGTC	2 cut(s)	433, 1382
Ppu21I	YACGTR	2 cut(s)	271, 977
PshBI	ATTAAT	1 cut(s)	929
Psp124BI	GAGCTC	1 cut(s)	45
Psp6I	CCWGG	5 cut(s)	500, 601, 645, 664, 706
PspGI	CCWGG	5 cut(s)	500, 601, 645, 664, 706
PspN4I	GGNNCC	5 cut(s)	286, 340, 967, 1159, 1440
PspPI	GGNCC	3 cut(s)	106, 284, 787
PstNI	CAGNNNCTG	1 cut(s)	1112
PsuI	RGATCY	2 cut(s)	316, 1438
PsyI	GACNNNGTC	1 cut(s)	568
PvuII	CAGCTG	1 cut(s)	1109
RsaI	GTAC	7 cut(s)	71, 245, 332, 408, 803, 1473, 1664
RsaNI	GTAC	7 cut(s)	70, 244, 331, 407, 802, 1472, 1663
RseI	CAYNNNNRTG	5 cut(s)	36, 975, 989, 995, 1992
SacI	GAGCTC	1 cut(s)	45
SapI	GCTCTTC	1 cut(s)	708
SaqAI	TTAA	8 cut(s)	279, 399, 929, 956, 987, 1034, 1898, 2118
Sau96I	GGNCC	3 cut(s)	106, 284, 787
ScaI	AGTACT	1 cut(s)	245
SchI	GAGTC	2 cut(s)	433, 1382
ScrFI	CCNGG	8 cut(s)	256, 502, 603, 647, 666, 708, 1082, 1303
SduI	GDGCHC	1 cut(s)	45
SexAI	ACCWGGT	1 cut(s)	645
SfcI	CTRYAG	1 cut(s)	145
SinI	GGWCC	1 cut(s)	106
SmiMI	CAYNNNNRTG	5 cut(s)	36, 975, 989, 995, 1992
SmlI	CTYRAG	1 cut(s)	2218
SmoI	CTYRAG	1 cut(s)	2218
Sse9I	AATT	9 cut(s)	430, 517, 871, 1199, 1722, 1812, 1841, 2043, 2119
SspI	AATATT	2 cut(s)	1051, 2092
SspMI	CTAG	2 cut(s)	1148, 1617
SstI	GAGCTC	1 cut(s)	45
StyD4I	CCNGG	8 cut(s)	254, 500, 601, 645, 664, 706, 1080, 1301
StyI	CCWWGG	2 cut(s)	342, 1161
TaaI	ACNGT	9 cut(s)	490, 622, 674, 748, 801, 1261, 1454, 1573, 2290
TaiI	ACGT	3 cut(s)	71, 273, 979
TaqI	TCGA	5 cut(s)	234, 451, 572, 616, 887
TasI	AATT	9 cut(s)	430, 517, 871, 1199, 1722, 1812, 1841, 2043, 2119
TatI	WGTACW	6 cut(s)	243, 330, 406, 801, 1471, 1662
TauI	GCSGC	6 cut(s)	29, 114, 212, 303, 360, 1325
TfiI	GAWTC	4 cut(s)	166, 1281, 1687, 2207
Tru1I	TTAA	8 cut(s)	279, 399, 929, 956, 987, 1034, 1898, 2118
Tru9I	TTAA	8 cut(s)	279, 399, 929, 956, 987, 1034, 1898, 2118
TscAI	CASTG	4 cut(s)	627, 924, 1315, 1576
TseFI	GTSAC	4 cut(s)	364, 766, 980, 1261
TseI	GCWGC	4 cut(s)	1109, 1319, 1883, 2084
Tsp45I	GTSAC	4 cut(s)	364, 766, 980, 1261
TspGWI	ACGGA	3 cut(s)	78, 230, 1047
TspRI	CASTG	4 cut(s)	627, 924, 1315, 1576
Tth111I	GACNNNGTC	1 cut(s)	568
VpaK11BI	GGWCC	1 cut(s)	106
VspI	ATTAAT	1 cut(s)	929
XapI	RAATTY	2 cut(s)	430, 1199
XceI	RCATGY	1 cut(s)	1472
XmnI	GAANNNNTTC	1 cut(s)	264
XspI	CTAG	2 cut(s)	1148, 1617
ZrmI	AGTACT	1 cut(s)	245
Zsp2I	ATGCAT	3 cut(s)	856, 1291, 1485

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.